AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1097980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1097980 MtrunA17_Chr7g0220381 98.353 668 10 1 1 667 1 668 0.0 1360
Msa1097980 MtrunA17_Chr1g0146501 45.373 670 332 10 9 661 5 657 0.0 545
Msa1097980 MtrunA17_Chr3g0127811 45.825 515 233 6 9 521 5 475 1.02e-139 417
Msa1097980 MtrunA17_Chr3g0143821 33.642 324 192 8 71 390 83 387 3.86e-47 175
Msa1097980 MtrunA17_Chr1g0204121 32.298 322 200 8 71 390 62 367 2.09e-45 169
Msa1097980 MtrunA17_Chr1g0204121 35.537 121 65 5 461 580 366 474 4.27e-11 65.9
Msa1097980 MtrunA17_Chr5g0399311 32.398 392 220 16 6 385 38 396 2.82e-45 169
Msa1097980 MtrunA17_Chr4g0056061 31.720 372 226 10 20 385 31 380 3.56e-45 169
Msa1097980 MtrunA17_Chr1g0204141 31.790 324 202 8 71 390 62 370 4.79e-45 168
Msa1097980 MtrunA17_Chr1g0204141 37.190 121 63 5 461 580 369 477 2.53e-11 66.6
Msa1097980 MtrunA17_Chr5g0448581 30.807 409 238 12 5 390 8 394 6.42e-43 163
Msa1097980 MtrunA17_Chr5g0436321 32.119 302 187 7 90 390 153 437 2.01e-42 161
Msa1097980 MtrunA17_Chr3g0129981 29.319 382 237 10 14 390 37 390 4.65e-42 160
Msa1097980 MtrunA17_Chr6g0455571 32.237 304 176 8 97 391 114 396 3.33e-40 154
Msa1097980 MtrunA17_Chr5g0417871 31.023 303 190 6 87 386 74 360 6.37e-40 153
Msa1097980 MtrunA17_Chr4g0042711 32.558 301 174 8 92 384 91 370 3.61e-39 151
Msa1097980 MtrunA17_Chr4g0061781 32.542 295 179 7 97 387 115 393 4.66e-39 151
Msa1097980 MtrunA17_Chr5g0426591 28.824 340 216 9 61 390 67 390 1.03e-38 150
Msa1097980 MtrunA17_Chr2g0307971 31.447 318 186 9 83 390 100 395 1.63e-38 149
Msa1097980 MtrunA17_Chr4g0008451 31.068 309 190 9 85 390 220 508 6.47e-38 149
Msa1097980 MtrunA17_Chr3g0132371 27.361 413 257 14 2 390 24 417 9.59e-38 147
Msa1097980 MtrunA17_Chr3g0123521 29.260 311 188 8 96 390 148 442 8.05e-36 142
Msa1097980 MtrunA17_Chr4g0070551 31.650 297 183 8 96 390 226 504 1.85e-35 142
Msa1097980 MtrunA17_Chr1g0160781 28.339 307 192 9 97 390 148 439 6.45e-33 133
Msa1097980 MtrunA17_Chr5g0424241 28.962 366 225 13 55 400 107 457 8.27e-33 134
Msa1097980 MtrunA17_Chr3g0077321 31.013 316 192 9 97 400 146 447 9.70e-33 133
Msa1097980 MtrunA17_Chr4g0075311 28.986 345 196 8 83 390 151 483 3.69e-32 132
Msa1097980 MtrunA17_Chr4g0043911 27.632 304 198 8 97 390 149 440 3.74e-31 128
Msa1097980 MtrunA17_Chr5g0412251 28.107 338 203 6 89 396 77 404 3.65e-30 125
Msa1097980 MtrunA17_Chr3g0087291 30.584 291 185 7 101 390 176 450 4.33e-30 125
Msa1097980 MtrunA17_Chr4g0010511 29.897 291 187 7 101 390 236 510 2.04e-29 124
Msa1097980 MtrunA17_Chr3g0132951 28.571 336 198 7 92 396 94 418 3.45e-29 122
Msa1097980 MtrunA17_Chr2g0284071 25.490 357 221 7 70 390 185 532 1.72e-27 118
Msa1097980 MtrunA17_Chr4g0003561 23.762 303 202 7 97 395 74 351 1.83e-15 79.3
Msa1097980 MtrunA17_Chr2g0298881 23.208 293 173 8 97 382 34 281 8.69e-14 73.6
Msa1097980 MtrunA17_Chr7g0240241 31.092 119 74 2 272 386 7 121 1.24e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1097980 AT3G30300.2 66.861 685 201 6 1 667 1 677 0.0 907
Msa1097980 AT3G30300.1 66.861 685 201 6 1 667 1 677 0.0 907
Msa1097980 AT3G03810.2 48.271 665 326 7 8 666 4 656 0.0 585
Msa1097980 AT3G03810.1 48.271 665 326 7 8 666 4 656 0.0 585
Msa1097980 AT4G38390.1 34.421 337 192 10 62 390 85 400 8.31e-49 180
Msa1097980 AT1G04910.1 31.988 322 201 8 71 390 62 367 4.65e-45 169
Msa1097980 AT1G20550.1 33.846 325 174 11 79 390 88 384 3.45e-44 167
Msa1097980 AT1G11990.1 30.882 340 214 8 60 390 153 480 9.79e-44 166
Msa1097980 AT4G16650.2 34.202 307 172 10 88 386 111 395 2.59e-43 164
Msa1097980 AT4G16650.1 34.202 307 172 10 88 386 111 395 2.59e-43 164
Msa1097980 AT1G76270.1 34.343 297 174 8 96 390 104 381 2.86e-43 164
Msa1097980 AT5G64600.1 29.750 400 241 10 12 396 25 399 1.20e-42 162
Msa1097980 AT1G22460.1 32.051 312 187 11 83 390 146 436 1.19e-40 157
Msa1097980 AT3G02250.1 28.792 389 235 13 1 384 29 380 1.78e-39 152
Msa1097980 AT2G03280.1 33.221 298 176 7 98 390 88 367 1.76e-38 149
Msa1097980 AT3G54100.1 28.614 339 203 9 55 390 196 498 2.03e-38 151
Msa1097980 AT5G15740.1 33.106 293 172 9 98 384 106 380 5.04e-38 148
Msa1097980 AT1G14020.1 32.550 298 178 7 98 390 91 370 1.05e-37 147
Msa1097980 AT2G37980.1 29.080 337 204 9 55 390 200 502 1.91e-37 148
Msa1097980 AT5G35570.1 28.977 352 205 10 44 390 216 527 6.14e-37 147
Msa1097980 AT5G01100.1 29.934 304 189 8 94 393 212 495 7.21e-37 147
Msa1097980 AT3G26370.1 28.754 313 191 8 94 390 154 450 9.50e-37 145
Msa1097980 AT1G11990.2 27.807 374 210 9 64 390 142 502 1.43e-36 145
Msa1097980 AT2G03280.2 31.153 321 179 7 98 390 88 394 1.88e-36 144
Msa1097980 AT1G38065.2 29.773 309 193 9 98 395 26 321 1.09e-33 135
Msa1097980 AT1G35510.1 29.467 319 197 9 95 400 156 459 1.15e-33 136
Msa1097980 AT1G38065.1 29.773 309 193 9 98 395 36 331 1.25e-33 135
Msa1097980 AT1G62330.1 26.879 346 203 8 83 390 208 541 1.66e-33 137
Msa1097980 AT1G38131.1 29.450 309 194 9 98 395 155 450 2.74e-33 135
Msa1097980 AT4G24530.1 28.916 332 192 9 97 396 100 419 3.72e-32 131
Msa1097980 AT5G63390.1 31.271 291 186 7 101 391 167 443 5.11e-32 131
Msa1097980 AT5G65470.1 28.529 340 201 7 89 396 76 405 5.57e-32 130
Msa1097980 AT2G01480.1 27.541 305 197 8 97 390 153 444 7.98e-32 131
Msa1097980 AT2G01480.2 27.541 305 197 8 97 390 153 444 1.08e-31 130
Msa1097980 AT3G07900.1 31.959 291 182 8 101 390 191 466 3.70e-31 129
Msa1097980 AT1G14970.3 29.000 300 189 8 98 386 9 295 8.29e-31 125
Msa1097980 AT1G14970.2 29.000 300 189 8 98 386 35 321 1.00e-30 125
Msa1097980 AT1G14970.1 29.000 300 189 8 98 386 155 441 5.72e-30 125
Msa1097980 AT1G29200.4 28.793 323 193 6 98 390 70 385 4.41e-29 122
Msa1097980 AT1G29200.1 28.793 323 193 6 98 390 70 385 4.41e-29 122
Msa1097980 AT2G44500.1 30.000 290 189 6 101 390 180 455 6.47e-29 122
Msa1097980 AT1G29200.2 28.793 323 193 6 98 390 186 501 1.06e-28 122
Msa1097980 AT1G29200.3 27.987 318 192 6 103 390 1 311 6.02e-26 111
Msa1097980 AT3G26370.2 27.586 203 120 6 94 281 154 344 2.01e-20 94.4
Msa1097980 AT2G44500.2 28.033 239 158 6 101 339 180 404 1.77e-18 89.0
Msa1097980 AT1G52630.1 23.684 304 203 9 96 396 72 349 3.56e-16 82.0
Msa1097980 AT1G52630.2 22.997 287 192 9 113 396 1 261 2.90e-11 65.9

Find 188 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTTGTTGATTGGATTTC+AGG 0.114456 7_3:-24278478 None:intergenic
CTTGCACCCTTTAGATATTT+TGG 0.122402 7_3:-24278989 None:intergenic
TAGCACGTAACTTATATTTA+AGG 0.138942 7_3:-24281422 None:intergenic
AAGGAACATGGTTTAAATTA+TGG 0.191022 7_3:+24281238 Msa1097980:three_prime_UTR
TCCGGATTCATGTACATAAT+TGG 0.204098 7_3:+24281143 Msa1097980:three_prime_UTR
CTCACCTCCTCAGGCATTAA+AGG 0.230626 7_3:-24279840 None:intergenic
TGCATACCGGATTTAGTTTC+AGG 0.232359 7_3:+24281183 Msa1097980:three_prime_UTR
CCTTGCTGCTGGTTGTTGAT+TGG 0.234456 7_3:-24278486 None:intergenic
TACCCTCTTGGATTTGAATC+TGG 0.261112 7_3:-24276832 None:intergenic
TGATTCTTCTAGTTAATATT+AGG 0.270925 7_3:+24281483 Msa1097980:three_prime_UTR
CCCTCTATGTTATACGATTT+CGG 0.281045 7_3:-24280264 None:intergenic
TTATCTTTCGATTGAGAAAC+TGG 0.284446 7_3:-24280914 None:intergenic
CTCTCTCTCTATTGTCTTTG+TGG 0.292490 7_3:+24275928 Msa1097980:five_prime_UTR
ATCGTTTAAAGTGCCGTATT+CGG 0.301269 7_3:+24279030 Msa1097980:CDS
TATTGATAACATATCAGTTT+TGG 0.302331 7_3:+24281448 Msa1097980:three_prime_UTR
CAACCAGCAGCAAGGGAATA+AGG 0.304830 7_3:+24278494 Msa1097980:CDS
CATACATTAGTAGGAAAATC+TGG 0.311648 7_3:-24276306 None:intergenic
ATCAGGTTCATTATCACTTT+CGG 0.311781 7_3:-24280304 None:intergenic
ACATAGAGGGTTGGTGGGGC+TGG 0.313553 7_3:+24280277 Msa1097980:CDS
TCTTCCATTCCTTTATCTCT+TGG 0.320545 7_3:+24280854 Msa1097980:CDS
ACATGATGCAAGTAATAAAA+AGG 0.324021 7_3:-24279058 None:intergenic
TTCCAACGGCGGATGCTTGC+AGG 0.331819 7_3:+24279123 Msa1097980:CDS
ATGAAATGGGTTGGTTTAGT+TGG 0.334853 7_3:+24276162 Msa1097980:CDS
TTGCTAATGAGAATATAAAT+TGG 0.351225 7_3:-24278940 None:intergenic
AGTTCCATTACTGTGCTATC+AGG 0.353214 7_3:-24280321 None:intergenic
CCATTCATTGCGTTTGATCC+TGG 0.356161 7_3:+24279567 Msa1097980:CDS
TGAAATGGGTTGGTTTAGTT+GGG 0.358629 7_3:+24276163 Msa1097980:CDS
TTAAACCATGTTCCTTAGTA+AGG 0.360046 7_3:-24281231 None:intergenic
AGTAGTTTACATACATTAGT+AGG 0.366322 7_3:-24276315 None:intergenic
TGCCGCAAACATGAACATTC+AGG 0.368589 7_3:-24280809 None:intergenic
GATGACGATGATTCTGTATC+TGG 0.377269 7_3:+24280956 Msa1097980:CDS
GTTCATCTAACAATCGATAA+TGG 0.382324 7_3:+24281110 Msa1097980:three_prime_UTR
GTGGTTCATATAGAAGATTA+TGG 0.382745 7_3:+24276779 Msa1097980:CDS
TCCCTGAATGTTCATGTTTG+CGG 0.387148 7_3:+24280807 Msa1097980:CDS
TAAATTGGTCCTCATTATAT+AGG 0.387192 7_3:-24278925 None:intergenic
ATAGAGTTTATTTACCTGTC+AGG 0.396931 7_3:-24280513 None:intergenic
TGGGAGATGATTAAGATCTA+TGG 0.399799 7_3:+24280120 Msa1097980:CDS
GATGCAATTATATATGTATC+TGG 0.399917 7_3:+24280009 Msa1097980:CDS
CTTCAATCACTATCTTCTCT+TGG 0.403588 7_3:+24276265 Msa1097980:CDS
TTCCTCGAAAGGTGGTGGTC+CGG 0.409248 7_3:-24280172 None:intergenic
AAAATCTGGTTTATCAAAGA+TGG 0.413402 7_3:-24276292 None:intergenic
ACTGAATGCTTCTTTAATAC+AGG 0.417130 7_3:-24279085 None:intergenic
GAAGCCGATGTGTTCATTCC+TGG 0.419301 7_3:+24280399 Msa1097980:CDS
TCCCGGACCACCACCTTTCG+AGG 0.420937 7_3:+24280170 Msa1097980:CDS
GATAATGGATTCACATTCTC+CGG 0.427881 7_3:+24281125 Msa1097980:three_prime_UTR
AACTCTTCCAAAATATCTAA+AGG 0.434334 7_3:+24278982 Msa1097980:CDS
TTCGGTCTCGCTGGAGGAGG+AGG 0.434882 7_3:-24280246 None:intergenic
GTATCTGGAGGAGAAGTCTT+TGG 0.438049 7_3:+24280024 Msa1097980:CDS
CATAGAGGGTTGGTGGGGCT+GGG 0.440865 7_3:+24280278 Msa1097980:CDS
AAAGGTGGTGGTCCGGGAGG+AGG 0.441362 7_3:-24280165 None:intergenic
ACCAATTATGTACATGAATC+CGG 0.441886 7_3:-24281144 None:intergenic
TCCTCGAAAGGTGGTGGTCC+GGG 0.443530 7_3:-24280171 None:intergenic
GAATGAAAAGAATTATGAAA+TGG 0.445211 7_3:+24281604 Msa1097980:three_prime_UTR
ACCCTCTTGGATTTGAATCT+GGG 0.447348 7_3:-24276831 None:intergenic
CTCGCTGGAGGAGGAGGAAG+TGG 0.450959 7_3:-24280240 None:intergenic
GGATGAGAGAGAAAGGATAA+TGG 0.452745 7_3:-24280782 None:intergenic
ACTCTTCCAAAATATCTAAA+GGG 0.457148 7_3:+24278983 Msa1097980:CDS
AACTTCTCTTAGTACACCTT+GGG 0.457194 7_3:+24280101 Msa1097980:CDS
GAACCTTATTCCCTTGCTGC+TGG 0.463356 7_3:-24278497 None:intergenic
GGTATACTTCTGCGTGCCTA+TGG 0.465760 7_3:+24279976 Msa1097980:CDS
CATGAAAACCACCTTGTATC+CGG 0.471100 7_3:-24278302 None:intergenic
TGCTTCCAACCGCTGCATAC+CGG 0.473577 7_3:+24281170 Msa1097980:three_prime_UTR
CATCCAAGGTAATGTGTTGA+TGG 0.473684 7_3:+24281088 Msa1097980:three_prime_UTR
TCAGCTGAAGCAAGACTGAA+TGG 0.473934 7_3:+24279810 Msa1097980:CDS
ACATATTCTCTCACCTCCTC+AGG 0.474495 7_3:-24279849 None:intergenic
AATCCATTTGATTGTGAACC+AGG 0.476316 7_3:-24278270 None:intergenic
TGGTTCATATAGAAGATTAT+GGG 0.479376 7_3:+24276780 Msa1097980:CDS
TCTTCACCTGAAACTAAATC+CGG 0.481471 7_3:-24281189 None:intergenic
ATTTAGTTTCAGGTGAAGAA+AGG 0.482381 7_3:+24281193 Msa1097980:three_prime_UTR
CCTTTGATATTCTTCGAAAG+AGG 0.485146 7_3:-24279347 None:intergenic
TTTGTTACTACAACAATGAA+AGG 0.486229 7_3:+24276117 Msa1097980:exon
TTGTTACTACAACAATGAAA+GGG 0.490909 7_3:+24276118 Msa1097980:exon
GATCCTGGTTCACAATCAAA+TGG 0.491098 7_3:+24278267 Msa1097980:intron
TAATTCAACATAAAAGATCA+TGG 0.498852 7_3:+24279745 Msa1097980:CDS
TTATACGATTTCGGTCTCGC+TGG 0.501082 7_3:-24280255 None:intergenic
TGGATTTGACCGTGATGGGA+AGG 0.501130 7_3:+24280419 Msa1097980:CDS
TTAACTTCCTCGAAAGGTGG+TGG 0.501803 7_3:-24280177 None:intergenic
TTCCCATCACGGTCAAATCC+AGG 0.502266 7_3:-24280417 None:intergenic
GAATTGCGGGCGCAATGTAA+AGG 0.505280 7_3:-24281357 None:intergenic
TATTAGGCTTAAGTTCACTT+TGG 0.505889 7_3:+24281499 Msa1097980:three_prime_UTR
TAACCTGGATAATACCCTCT+TGG 0.506196 7_3:-24276844 None:intergenic
ATAAAACGTGGGATTGTCAA+AGG 0.507707 7_3:+24279771 Msa1097980:CDS
CCAGGATCAAACGCAATGAA+TGG 0.508815 7_3:-24279567 None:intergenic
TTCCTGGATTTGACCGTGAT+GGG 0.512010 7_3:+24280415 Msa1097980:CDS
AATCCAAGAGGGTATTATCC+AGG 0.512350 7_3:+24276841 Msa1097980:CDS
CTTTGATATTCTTCGAAAGA+GGG 0.516119 7_3:-24279346 None:intergenic
GATAAGGAAAATGAAGATGA+TGG 0.518136 7_3:+24280932 Msa1097980:CDS
CTCCTCAGGCATTAAAGGAC+AGG 0.524106 7_3:-24279835 None:intergenic
CGTATAACATAGAGGGTTGG+TGG 0.525137 7_3:+24280271 Msa1097980:CDS
AACCATGTTCCTTAGTAAGG+TGG 0.525806 7_3:-24281228 None:intergenic
AAAGCCTATCCACCTTACTA+AGG 0.527030 7_3:+24281219 Msa1097980:three_prime_UTR
TCATGCTCTTCAGTTCCGAC+AGG 0.528214 7_3:+24279390 Msa1097980:CDS
TACGATTTCGGTCTCGCTGG+AGG 0.529403 7_3:-24280252 None:intergenic
TAAAGAAGAAAATCAATTCG+AGG 0.529545 7_3:+24281033 Msa1097980:CDS
GGAGGAAGTGGACGAGGACG+TGG 0.530339 7_3:-24280228 None:intergenic
TGCGTAACACCAAGAGATAA+AGG 0.532186 7_3:-24280863 None:intergenic
TTAAATTATGGTTGCAGCTG+TGG 0.532542 7_3:+24281250 Msa1097980:three_prime_UTR
ATTCCTGGATTTGACCGTGA+TGG 0.532702 7_3:+24280414 Msa1097980:CDS
CAAAATATCTAAAGGGTGCA+AGG 0.534551 7_3:+24278990 Msa1097980:CDS
CAAAGTGGTGGAAATAATGA+AGG 0.534754 7_3:+24280992 Msa1097980:CDS
AGGGACTGGATGAGAGAGAA+AGG 0.536824 7_3:-24280789 None:intergenic
GGTTTATTCTTTAAACAAAG+TGG 0.537933 7_3:+24280977 Msa1097980:CDS
GGGACACAGGTTATACCAAT+CGG 0.538624 7_3:+24280470 Msa1097980:CDS
GATTTGACCGTGATGGGAAG+GGG 0.539167 7_3:+24280421 Msa1097980:CDS
GAACTTCTCTTAGTACACCT+TGG 0.539722 7_3:+24280100 Msa1097980:CDS
CAATCAACAACCAGCAGCAA+GGG 0.544284 7_3:+24278487 Msa1097980:CDS
AAAGACTCTCTAGTCATGCC+AGG 0.545147 7_3:-24279585 None:intergenic
GATTTCGGTCTCGCTGGAGG+AGG 0.545526 7_3:-24280249 None:intergenic
GCCGCAAACATGAACATTCA+GGG 0.546594 7_3:-24280808 None:intergenic
TAAATCCGGTATGCAGCGGT+TGG 0.547898 7_3:-24281175 None:intergenic
GGATTTGACCGTGATGGGAA+GGG 0.548738 7_3:+24280420 Msa1097980:CDS
TGCGGTCGAAATTGTGGTTG+CGG 0.553279 7_3:+24281311 Msa1097980:three_prime_UTR
ATATAGAAGATTATGGGGAC+AGG 0.553298 7_3:+24276786 Msa1097980:CDS
TGTTCCTTAGTAAGGTGGAT+AGG 0.554048 7_3:-24281223 None:intergenic
CTAGCTTGGTGATGGGACAC+AGG 0.554489 7_3:+24280457 Msa1097980:CDS
AAATCTGGTTTATCAAAGAT+GGG 0.555271 7_3:-24276291 None:intergenic
CTCGCGGCTTGGAAGAATGC+AGG 0.555324 7_3:+24280204 Msa1097980:CDS
GCACCAGTGTCCTGCATGGA+TGG 0.561700 7_3:+24280883 Msa1097980:CDS
CTCAGTTACACTTCTCAAGA+GGG 0.563980 7_3:+24276052 Msa1097980:five_prime_UTR
ACTCAGTTACACTTCTCAAG+AGG 0.564084 7_3:+24276051 Msa1097980:five_prime_UTR
TTATTCTTTAAACAAAGTGG+TGG 0.564908 7_3:+24280980 Msa1097980:CDS
TAAAACGTGGGATTGTCAAA+GGG 0.565236 7_3:+24279772 Msa1097980:CDS
TGAACCTGATAGCACAGTAA+TGG 0.565750 7_3:+24280317 Msa1097980:CDS
TACCTGCAAGCATCCGCCGT+TGG 0.566021 7_3:-24279125 None:intergenic
AGTTTCTCAATCGAAAGATA+AGG 0.570878 7_3:+24280916 Msa1097980:CDS
GGAGGAGGAGGAAGTGGACG+AGG 0.570933 7_3:-24280234 None:intergenic
CGTGGCTAAAATCAGTTCGC+AGG 0.573450 7_3:+24280705 Msa1097980:CDS
GTATAACATAGAGGGTTGGT+GGG 0.579086 7_3:+24280272 Msa1097980:CDS
TGTTACTACAACAATGAAAG+GGG 0.579318 7_3:+24276119 Msa1097980:exon
GAACCATCAACACATTACCT+TGG 0.581809 7_3:-24281091 None:intergenic
ACCGAAATCGTATAACATAG+AGG 0.582787 7_3:+24280263 Msa1097980:CDS
TGCTCATAAGTTACTGTGGG+AGG 0.583207 7_3:+24280353 Msa1097980:CDS
AACCTAGTTAATCCTCCTCC+CGG 0.583459 7_3:+24280153 Msa1097980:CDS
GTGGGAGGCTATTGATTATG+CGG 0.583519 7_3:+24280368 Msa1097980:CDS
TCGAATGCCCCTTCCCATCA+CGG 0.583522 7_3:-24280428 None:intergenic
CCAATCAACAACCAGCAGCA+AGG 0.583623 7_3:+24278486 Msa1097980:CDS
AAAGGGTGCAAGGAGAAAGA+AGG 0.584942 7_3:+24279000 Msa1097980:CDS
CAAAGACATTTAGACCTGAC+AGG 0.587301 7_3:+24280499 Msa1097980:CDS
AAACATGAACATTCAGGGAC+TGG 0.587652 7_3:-24280803 None:intergenic
GGACTAGTGACCATCCATGC+AGG 0.597131 7_3:-24280893 None:intergenic
GTCGAACTAGTTGTTTCCAA+CGG 0.598149 7_3:+24279109 Msa1097980:CDS
CAAATGCTCATAAGTTACTG+TGG 0.600315 7_3:+24280349 Msa1097980:CDS
ATGTCTTTGACGCAGCCGAT+TGG 0.601771 7_3:-24280485 None:intergenic
GTGGCATGCGGTCGAAATTG+TGG 0.603083 7_3:+24281305 Msa1097980:three_prime_UTR
TGACCATCCATGCAGGACAC+TGG 0.606588 7_3:-24280886 None:intergenic
CCTCTTTCGAAGAATATCAA+AGG 0.608451 7_3:+24279347 Msa1097980:CDS
GTCCGGGAGGAGGATTAACT+AGG 0.610677 7_3:-24280155 None:intergenic
TCTGGAGGAGAAGTCTTTGG+TGG 0.611496 7_3:+24280027 Msa1097980:CDS
CTGTCCTTTAATGCCTGAGG+AGG 0.612788 7_3:+24279836 Msa1097980:CDS
TCGAAAGGTGGTGGTCCGGG+AGG 0.613834 7_3:-24280168 None:intergenic
AGAATTATGAAATGGCAATG+TGG 0.618102 7_3:+24281612 Msa1097980:three_prime_UTR
CCGAAATCGTATAACATAGA+GGG 0.618996 7_3:+24280264 Msa1097980:CDS
CGAGGATCAAGAAGAGCTCG+AGG 0.619548 7_3:+24281051 Msa1097980:CDS
GATTAAGATCTATGGACAAG+AGG 0.623053 7_3:+24280128 Msa1097980:CDS
AAATGCTCATAAGTTACTGT+GGG 0.623707 7_3:+24280350 Msa1097980:CDS
ATCCTGTCCTTTAATGCCTG+AGG 0.629748 7_3:+24279833 Msa1097980:CDS
TGATATTCTTCGAAAGAGGG+AGG 0.632750 7_3:-24279343 None:intergenic
TTACGCACCAGTGTCCTGCA+TGG 0.633222 7_3:+24280879 Msa1097980:CDS
AACACCAAGAGATAAAGGAA+TGG 0.633396 7_3:-24280858 None:intergenic
TGCATCCTTCGAATATCCAT+AGG 0.638105 7_3:-24279992 None:intergenic
TAGATCTTAATCATCTCCCA+AGG 0.641589 7_3:-24280117 None:intergenic
GCGTGCCTATGGATATTCGA+AGG 0.643407 7_3:+24279987 Msa1097980:CDS
GGAAAAGTTCAGCACAGCCG+TGG 0.645583 7_3:-24279614 None:intergenic
GAATACGGCACTTTAAACGA+TGG 0.650417 7_3:-24279028 None:intergenic
GGTTCATATAGAAGATTATG+GGG 0.652052 7_3:+24276781 Msa1097980:CDS
ATCCACCTTACTAAGGAACA+TGG 0.652290 7_3:+24281226 Msa1097980:three_prime_UTR
AAACTAAATCCGGTATGCAG+CGG 0.652936 7_3:-24281179 None:intergenic
AACGCAATGAATGGACGACT+AGG 0.653361 7_3:-24279558 None:intergenic
GATCAAGAAGAGCTCGAGGG+TGG 0.655181 7_3:+24281055 Msa1097980:CDS
TACGATTAGCTTGAAACATG+TGG 0.655487 7_3:-24280682 None:intergenic
AATCGTATAACATAGAGGGT+TGG 0.655865 7_3:+24280268 Msa1097980:CDS
TTAACTAGAAGAATCATGCA+AGG 0.657127 7_3:-24281476 None:intergenic
AGAGAGTCTTTAGCTTACCA+CGG 0.660062 7_3:+24279597 Msa1097980:CDS
TATAACATAGAGGGTTGGTG+GGG 0.660372 7_3:+24280273 Msa1097980:CDS
ACCCAGATTCAAATCCAAGA+GGG 0.661276 7_3:+24276830 Msa1097980:CDS
TGTATTAAAGAAGCATTCAG+TGG 0.663230 7_3:+24279087 Msa1097980:CDS
AGATCATGGATGATAAAACG+TGG 0.663806 7_3:+24279759 Msa1097980:CDS
GATCATGGATGATAAAACGT+GGG 0.665807 7_3:+24279760 Msa1097980:CDS
GCAATTATATATGTATCTGG+AGG 0.667193 7_3:+24280012 Msa1097980:CDS
AAAGTTCGTGAACTTCCTGT+CGG 0.667614 7_3:-24279405 None:intergenic
TACCCAGATTCAAATCCAAG+AGG 0.669740 7_3:+24276829 Msa1097980:CDS
GTGGCGACAGATGACATCCA+AGG 0.676484 7_3:+24281074 Msa1097980:exon
TGTTTCAAGCTAATCGTACG+TGG 0.686857 7_3:+24280687 Msa1097980:CDS
GAACTAGTTGTTTCCAACGG+CGG 0.690031 7_3:+24279112 Msa1097980:CDS
ATGCGGCAAAATGTGGCATG+CGG 0.694884 7_3:+24281293 Msa1097980:three_prime_UTR
GAGGATCAAGAAGAGCTCGA+GGG 0.698107 7_3:+24281052 Msa1097980:CDS
ATAGCACAGTAATGGAACTG+AGG 0.703450 7_3:+24280325 Msa1097980:CDS
AAATCCAGGAATGAACACAT+CGG 0.724691 7_3:-24280403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATGAAATTAATGA+TGG + chr7_3:24277256-24277275 Msa1097980:intron 10.0%
!!! TTTTATATGAAATTAATGAT+GGG + chr7_3:24277257-24277276 Msa1097980:intron 10.0%
!!! AACAGTTTTTAAATTAAAAT+GGG + chr7_3:24277813-24277832 Msa1097980:intron 10.0%
!!! AAAAAAAAAAATGATTTTGA+CGG + chr7_3:24279916-24279935 Msa1097980:intron 10.0%
!!! AATTTAATCTTTGAAATTGA+GGG + chr7_3:24277350-24277369 Msa1097980:intron 15.0%
!!! TTTAATTTCAATGATCAAAT+TGG - chr7_3:24277381-24277400 None:intergenic 15.0%
!!! CAACAGTTTTTAAATTAAAA+TGG + chr7_3:24277812-24277831 Msa1097980:intron 15.0%
!!! TTTTTAAATTAAAATGGGAA+AGG + chr7_3:24277818-24277837 Msa1097980:intron 15.0%
!!! TTTTAAATTAAAATGGGAAA+GGG + chr7_3:24277819-24277838 Msa1097980:intron 15.0%
!! ATTAAATTGTTTATCCAAAA+AGG - chr7_3:24278565-24278584 None:intergenic 15.0%
!! TATAACTAAAGATAAAACAA+AGG + chr7_3:24278640-24278659 Msa1097980:intron 15.0%
!! TTAATAGGTACATATAATAA+AGG - chr7_3:24279272-24279291 None:intergenic 15.0%
!! AAAAAGAAACAACAATTAAT+AGG - chr7_3:24279287-24279306 None:intergenic 15.0%
!!! AATTTTCATGACATAATTAT+AGG + chr7_3:24279526-24279545 Msa1097980:intron 15.0%
!!! TTTTCATTCAATATATGAAA+AGG - chr7_3:24281593-24281612 None:intergenic 15.0%
!! AAATGAAGTCAAAAATGAAA+TGG + chr7_3:24276148-24276167 Msa1097980:CDS 20.0%
!! AATGAAGTCAAAAATGAAAT+GGG + chr7_3:24276149-24276168 Msa1097980:CDS 20.0%
!! AAATCAAAAACAAAAAATCG+GGG - chr7_3:24276376-24276395 None:intergenic 20.0%
!! CAAATCAAAAACAAAAAATC+GGG - chr7_3:24276377-24276396 None:intergenic 20.0%
!! CCAAATCAAAAACAAAAAAT+CGG - chr7_3:24276378-24276397 None:intergenic 20.0%
!!! AAAACATATCCCTTTTTTTA+AGG + chr7_3:24276435-24276454 Msa1097980:intron 20.0%
!!! AAACATATCCCTTTTTTTAA+GGG + chr7_3:24276436-24276455 Msa1097980:intron 20.0%
!!! TTTTTGTTGTGTGTATTTTA+AGG + chr7_3:24276693-24276712 Msa1097980:intron 20.0%
!! CTCAATTTCAAAGATTAAAT+TGG - chr7_3:24277351-24277370 None:intergenic 20.0%
!!! CAATTTAATCTTTGAAATTG+AGG + chr7_3:24277349-24277368 Msa1097980:intron 20.0%
!!! ATTTAATCTTTGAAATTGAG+GGG + chr7_3:24277351-24277370 Msa1097980:intron 20.0%
!! TTTAAATTAAAATGGGAAAG+GGG + chr7_3:24277820-24277839 Msa1097980:intron 20.0%
!!! AGAGTTTTTTTTAACCTTTT+AGG - chr7_3:24278233-24278252 None:intergenic 20.0%
!! ACAATTTAATAAACCACTTA+TGG + chr7_3:24278575-24278594 Msa1097980:intron 20.0%
!!! TATTTTTAGCTTATTTCCAT+AGG - chr7_3:24278718-24278737 None:intergenic 20.0%
!! TATGGAAATAAGCTAAAAAT+AGG + chr7_3:24278717-24278736 Msa1097980:intron 20.0%
!!! ATTTATTTGAGTTTATCTAC+TGG - chr7_3:24278808-24278827 None:intergenic 20.0%
!! TTGCTAATGAGAATATAAAT+TGG - chr7_3:24278943-24278962 None:intergenic 20.0%
!! AACCAATTTAAAAATCTTCA+TGG - chr7_3:24279240-24279259 None:intergenic 20.0%
!! TAATTCAACATAAAAGATCA+TGG + chr7_3:24279745-24279764 Msa1097980:CDS 20.0%
!!! TAGTAAATGATTTTGAATTG+CGG - chr7_3:24281374-24281393 None:intergenic 20.0%
!!! TATTGATAACATATCAGTTT+TGG + chr7_3:24281448-24281467 Msa1097980:three_prime_UTR 20.0%
!!! TGATTCTTCTAGTTAATATT+AGG + chr7_3:24281483-24281502 Msa1097980:three_prime_UTR 20.0%
!! AATCTTATCAGATACAAAAA+TGG - chr7_3:24281560-24281579 None:intergenic 20.0%
!! GAATGAAAAGAATTATGAAA+TGG + chr7_3:24281604-24281623 Msa1097980:three_prime_UTR 20.0%
! TTTGTTACTACAACAATGAA+AGG + chr7_3:24276117-24276136 Msa1097980:exon 25.0%
! TTGTTACTACAACAATGAAA+GGG + chr7_3:24276118-24276137 Msa1097980:exon 25.0%
!! AAATCTGGTTTATCAAAGAT+GGG - chr7_3:24276294-24276313 None:intergenic 25.0%
!! AAAATCTGGTTTATCAAAGA+TGG - chr7_3:24276295-24276314 None:intergenic 25.0%
! AGTAGTTTACATACATTAGT+AGG - chr7_3:24276318-24276337 None:intergenic 25.0%
! AATCAAAAACAAAAAATCGG+GGG - chr7_3:24276375-24276394 None:intergenic 25.0%
!!! CCGATTTTTTGTTTTTGATT+TGG + chr7_3:24276375-24276394 Msa1097980:intron 25.0%
!!! AACATATCCCTTTTTTTAAG+GGG + chr7_3:24276437-24276456 Msa1097980:intron 25.0%
! AACTAAACCCCTTAAAAAAA+GGG - chr7_3:24276447-24276466 None:intergenic 25.0%
! AAACTAAACCCCTTAAAAAA+AGG - chr7_3:24276448-24276467 None:intergenic 25.0%
!!! AACAACTTTGTCATTTTCTA+AGG - chr7_3:24276491-24276510 None:intergenic 25.0%
!!! TCTCTTTGTTGTGTATTTTA+AGG + chr7_3:24276728-24276747 Msa1097980:intron 25.0%
! TGGTTCATATAGAAGATTAT+GGG + chr7_3:24276780-24276799 Msa1097980:CDS 25.0%
! TTGGTCAAAAGATAAATCAA+TGG - chr7_3:24276943-24276962 None:intergenic 25.0%
! AATTGCTACATATAGGAAAT+TGG - chr7_3:24277154-24277173 None:intergenic 25.0%
!! GATTCTTTTGAATCACTATA+AGG + chr7_3:24277204-24277223 Msa1097980:intron 25.0%
!!! CATATAAAAAGCATCATAAC+CGG - chr7_3:24277246-24277265 None:intergenic 25.0%
!! CAAAGATTAAATTGGTGATT+CGG - chr7_3:24277343-24277362 None:intergenic 25.0%
! GTAGAATGCTATTAATTTCA+GGG - chr7_3:24277421-24277440 None:intergenic 25.0%
! ATTATTGCAAAGAACTAATG+TGG - chr7_3:24277443-24277462 None:intergenic 25.0%
! ACAGCATATATGAATAATGT+CGG + chr7_3:24278003-24278022 Msa1097980:intron 25.0%
! AAATTCTCACTAAGAATAGT+TGG + chr7_3:24278042-24278061 Msa1097980:intron 25.0%
! CTATATATAAAGACTTTGAC+TGG - chr7_3:24278193-24278212 None:intergenic 25.0%
!!! CAAATGGATTTATTTTTGTC+CGG + chr7_3:24278283-24278302 Msa1097980:CDS 25.0%
! GTGAGGTTATTTATTGTTTA+AGG + chr7_3:24278339-24278358 Msa1097980:intron 25.0%
!!! TCTTTTTTAGATAAGTGATG+TGG + chr7_3:24278417-24278436 Msa1097980:intron 25.0%
! ATAAGCACTTATCATATAAG+CGG + chr7_3:24278599-24278618 Msa1097980:intron 25.0%
! TTATAGACATAACTGTCATA+TGG + chr7_3:24278740-24278759 Msa1097980:intron 25.0%
! TATAGAGCATATGAGATTTA+GGG - chr7_3:24278844-24278863 None:intergenic 25.0%
! ATATAGAGCATATGAGATTT+AGG - chr7_3:24278845-24278864 None:intergenic 25.0%
!! TTTTGCATACCTATATAATG+AGG + chr7_3:24278916-24278935 Msa1097980:CDS 25.0%
! TAAATTGGTCCTCATTATAT+AGG - chr7_3:24278928-24278947 None:intergenic 25.0%
! AACTCTTCCAAAATATCTAA+AGG + chr7_3:24278982-24279001 Msa1097980:CDS 25.0%
! ACTCTTCCAAAATATCTAAA+GGG + chr7_3:24278983-24279002 Msa1097980:CDS 25.0%
! ACATGATGCAAGTAATAAAA+AGG - chr7_3:24279061-24279080 None:intergenic 25.0%
! GATAAAATTTGAATTCTGGT+AGG - chr7_3:24279202-24279221 None:intergenic 25.0%
!! CACCATGAAGATTTTTAAAT+TGG + chr7_3:24279235-24279254 Msa1097980:intron 25.0%
! CCAAAAGGGATAAAATATTA+TGG - chr7_3:24279500-24279519 None:intergenic 25.0%
!! CCATAATATTTTATCCCTTT+TGG + chr7_3:24279497-24279516 Msa1097980:intron 25.0%
! TGAAAATTCAGAAACCAAAA+GGG - chr7_3:24279514-24279533 None:intergenic 25.0%
! ATGAAAATTCAGAAACCAAA+AGG - chr7_3:24279515-24279534 None:intergenic 25.0%
! ATATGTTTAAACTTCTGACA+AGG + chr7_3:24279866-24279885 Msa1097980:intron 25.0%
! GATGCAATTATATATGTATC+TGG + chr7_3:24280009-24280028 Msa1097980:CDS 25.0%
! TTGAGAAAAACATTAATCGA+TGG + chr7_3:24280731-24280750 Msa1097980:CDS 25.0%
! GGTTTATTCTTTAAACAAAG+TGG + chr7_3:24280977-24280996 Msa1097980:CDS 25.0%
! TTATTCTTTAAACAAAGTGG+TGG + chr7_3:24280980-24280999 Msa1097980:CDS 25.0%
! TAAAGAAGAAAATCAATTCG+AGG + chr7_3:24281033-24281052 Msa1097980:CDS 25.0%
! AAGGAACATGGTTTAAATTA+TGG + chr7_3:24281238-24281257 Msa1097980:three_prime_UTR 25.0%
!! AGTAAATGATTTTGAATTGC+GGG - chr7_3:24281373-24281392 None:intergenic 25.0%
! TAGCACGTAACTTATATTTA+AGG - chr7_3:24281425-24281444 None:intergenic 25.0%
TGTTACTACAACAATGAAAG+GGG + chr7_3:24276119-24276138 Msa1097980:exon 30.0%
AAGTCAAAAATGAAATGGGT+TGG + chr7_3:24276153-24276172 Msa1097980:CDS 30.0%
CATACATTAGTAGGAAAATC+TGG - chr7_3:24276309-24276328 None:intergenic 30.0%
ATCAAAAACAAAAAATCGGG+GGG - chr7_3:24276374-24276393 None:intergenic 30.0%
GTGGTTCATATAGAAGATTA+TGG + chr7_3:24276779-24276798 Msa1097980:CDS 30.0%
GGTTCATATAGAAGATTATG+GGG + chr7_3:24276781-24276800 Msa1097980:CDS 30.0%
! AAAGCATCAAGATGAAAAGT+TGG - chr7_3:24276872-24276891 None:intergenic 30.0%
TCATCTGTTTCATGTATGTT+TGG + chr7_3:24277049-24277068 Msa1097980:intron 30.0%
! TTCATGTATGTTTGGAATCA+CGG + chr7_3:24277057-24277076 Msa1097980:intron 30.0%
! ACAATGTGACATAATGCTTT+TGG - chr7_3:24277124-24277143 None:intergenic 30.0%
TTCCTATATGTAGCAATTTC+CGG + chr7_3:24277156-24277175 Msa1097980:intron 30.0%
ACAAAACAAAAGATTCTTCC+CGG - chr7_3:24277178-24277197 None:intergenic 30.0%
GGTAGAATGCTATTAATTTC+AGG - chr7_3:24277422-24277441 None:intergenic 30.0%
ATTGTTGTCTGTGTATTGTA+TGG - chr7_3:24277604-24277623 None:intergenic 30.0%
GTTGAGACAAACTAAAATCA+GGG - chr7_3:24277796-24277815 None:intergenic 30.0%
TGTTGAGACAAACTAAAATC+AGG - chr7_3:24277797-24277816 None:intergenic 30.0%
GTTTGACCTTATAATCTCAA+GGG - chr7_3:24277907-24277926 None:intergenic 30.0%
AGTTTGACCTTATAATCTCA+AGG - chr7_3:24277908-24277927 None:intergenic 30.0%
TAAAATACATGTGCAAGTGT+TGG - chr7_3:24277958-24277977 None:intergenic 30.0%
AGTATACGGACATAAAAGAA+TGG - chr7_3:24278154-24278173 None:intergenic 30.0%
TTACATCTAACCAGAGTATA+CGG - chr7_3:24278168-24278187 None:intergenic 30.0%
CTTTCTAATATTCGCCTAAA+AGG + chr7_3:24278216-24278235 Msa1097980:intron 30.0%
!!! TTTATTTTTGTCCGGATACA+AGG + chr7_3:24278291-24278310 Msa1097980:CDS 30.0%
! TTTTCATGAGATCAGGAATT+CGG + chr7_3:24278317-24278336 Msa1097980:CDS 30.0%
ACTGAATGCTTCTTTAATAC+AGG - chr7_3:24279088-24279107 None:intergenic 30.0%
!! TGTATTAAAGAAGCATTCAG+TGG + chr7_3:24279087-24279106 Msa1097980:CDS 30.0%
CAACATATGGTTCATGTATT+AGG + chr7_3:24279152-24279171 Msa1097980:intron 30.0%
CGGAGATAAAATTTGAATTC+TGG - chr7_3:24279206-24279225 None:intergenic 30.0%
CCTGAAAAGAAGAAAGAAAA+GGG - chr7_3:24279315-24279334 None:intergenic 30.0%
CTTTGATATTCTTCGAAAGA+GGG - chr7_3:24279349-24279368 None:intergenic 30.0%
! TTTCTGCTAAAATTTTGCAG+AGG + chr7_3:24279425-24279444 Msa1097980:CDS 30.0%
CACAAATAGAATTACATACC+TGG - chr7_3:24279638-24279657 None:intergenic 30.0%
CAGGTATGTAATTCTATTTG+TGG + chr7_3:24279636-24279655 Msa1097980:intron 30.0%
AATCTTGATTTCTTCCAGAT+TGG + chr7_3:24279955-24279974 Msa1097980:intron 30.0%
GCAATTATATATGTATCTGG+AGG + chr7_3:24280012-24280031 Msa1097980:CDS 30.0%
!!! AGTTTTTTAACTTCCTCGAA+AGG - chr7_3:24280186-24280205 None:intergenic 30.0%
ATCAGGTTCATTATCACTTT+CGG - chr7_3:24280307-24280326 None:intergenic 30.0%
AAATGCTCATAAGTTACTGT+GGG + chr7_3:24280350-24280369 Msa1097980:CDS 30.0%
ATAGAGTTTATTTACCTGTC+AGG - chr7_3:24280516-24280535 None:intergenic 30.0%
CATACATAGAAACATCAATC+AGG - chr7_3:24280539-24280558 None:intergenic 30.0%
! TTGCAAGGTATTAAAACAAG+TGG - chr7_3:24280604-24280623 None:intergenic 30.0%
GATAAGGAAAATGAAGATGA+TGG + chr7_3:24280932-24280951 Msa1097980:CDS 30.0%
GTTCATCTAACAATCGATAA+TGG + chr7_3:24281110-24281129 Msa1097980:three_prime_UTR 30.0%
ACCAATTATGTACATGAATC+CGG - chr7_3:24281147-24281166 None:intergenic 30.0%
! ATTTAGTTTCAGGTGAAGAA+AGG + chr7_3:24281193-24281212 Msa1097980:three_prime_UTR 30.0%
TTAAACCATGTTCCTTAGTA+AGG - chr7_3:24281234-24281253 None:intergenic 30.0%
!!! TGCCGCAAATTTTTTAAATG+CGG + chr7_3:24281276-24281295 Msa1097980:three_prime_UTR 30.0%
TGCCGCATTTAAAAAATTTG+CGG - chr7_3:24281281-24281300 None:intergenic 30.0%
! TTTTTAAATGCGGCAAAATG+TGG + chr7_3:24281286-24281305 Msa1097980:three_prime_UTR 30.0%
TTAACTAGAAGAATCATGCA+AGG - chr7_3:24281479-24281498 None:intergenic 30.0%
TATTAGGCTTAAGTTCACTT+TGG + chr7_3:24281499-24281518 Msa1097980:three_prime_UTR 30.0%
AGAATTATGAAATGGCAATG+TGG + chr7_3:24281612-24281631 Msa1097980:three_prime_UTR 30.0%
!! ATGAAATGGGTTGGTTTAGT+TGG + chr7_3:24276162-24276181 Msa1097980:CDS 35.0%
!! TGAAATGGGTTGGTTTAGTT+GGG + chr7_3:24276163-24276182 Msa1097980:CDS 35.0%
CTTCAATCACTATCTTCTCT+TGG + chr7_3:24276265-24276284 Msa1097980:CDS 35.0%
TCAAAAACAAAAAATCGGGG+GGG - chr7_3:24276373-24276392 None:intergenic 35.0%
TCAGTGTGTAGTTTGAGTAT+TGG + chr7_3:24276515-24276534 Msa1097980:intron 35.0%
AAACCAATGAACAAAGACAG+TGG - chr7_3:24276598-24276617 None:intergenic 35.0%
! ACTGTCTTTGTTCATTGGTT+TGG + chr7_3:24276597-24276616 Msa1097980:intron 35.0%
TTATTGTTTGTGATGCAGAG+TGG + chr7_3:24276760-24276779 Msa1097980:intron 35.0%
ATATAGAAGATTATGGGGAC+AGG + chr7_3:24276786-24276805 Msa1097980:CDS 35.0%
! TGACCAAACTTGTGAACTTT+TGG + chr7_3:24276956-24276975 Msa1097980:intron 35.0%
! CAAACTTGTGAACTTTTGGT+GGG + chr7_3:24276960-24276979 Msa1097980:intron 35.0%
! AAACTTGTGAACTTTTGGTG+GGG + chr7_3:24276961-24276980 Msa1097980:intron 35.0%
TGCTACATATAGGAAATTGG+TGG - chr7_3:24277151-24277170 None:intergenic 35.0%
TCCTATATGTAGCAATTTCC+GGG + chr7_3:24277157-24277176 Msa1097980:intron 35.0%
AGGATGAAGATTCGATTATC+CGG + chr7_3:24277224-24277243 Msa1097980:intron 35.0%
GAGATTATGACTGATACATG+TGG + chr7_3:24277279-24277298 Msa1097980:intron 35.0%
! AAAGGCTTTTCCCTATTAGA+TGG - chr7_3:24277318-24277337 None:intergenic 35.0%
!! TAAATTGGTGATTCGGTCAA+AGG - chr7_3:24277336-24277355 None:intergenic 35.0%
! TCTTTTATGTCCGTATACTC+TGG + chr7_3:24278155-24278174 Msa1097980:intron 35.0%
AATCCATTTGATTGTGAACC+AGG - chr7_3:24278273-24278292 None:intergenic 35.0%
TAGAAGCTTGCATTTAACTC+TGG + chr7_3:24278538-24278557 Msa1097980:intron 35.0%
! CATTTAACTCTGGTCCTTTT+TGG + chr7_3:24278548-24278567 Msa1097980:intron 35.0%
ATAAGTGCTTATGCCATAAG+TGG - chr7_3:24278591-24278610 None:intergenic 35.0%
! CTTGCACCCTTTAGATATTT+TGG - chr7_3:24278992-24279011 None:intergenic 35.0%
! CAAAATATCTAAAGGGTGCA+AGG + chr7_3:24278990-24279009 Msa1097980:CDS 35.0%
!! ATCGTTTAAAGTGCCGTATT+CGG + chr7_3:24279030-24279049 Msa1097980:CDS 35.0%
TAAAAAGGTGATGCCGAATA+CGG - chr7_3:24279046-24279065 None:intergenic 35.0%
TTGCAGGTAAAGACAACATA+TGG + chr7_3:24279139-24279158 Msa1097980:intron 35.0%
! CCCTTTTCTTTCTTCTTTTC+AGG + chr7_3:24279312-24279331 Msa1097980:intron 35.0%
GCCTGAAAAGAAGAAAGAAA+AGG - chr7_3:24279316-24279335 None:intergenic 35.0%
CCTTTGATATTCTTCGAAAG+AGG - chr7_3:24279350-24279369 None:intergenic 35.0%
CCTCTTTCGAAGAATATCAA+AGG + chr7_3:24279347-24279366 Msa1097980:CDS 35.0%
! CTAAAATTTTGCAGAGGCAA+GGG + chr7_3:24279431-24279450 Msa1097980:intron 35.0%
TCGTATTCGAGCTTCAATAA+TGG + chr7_3:24279688-24279707 Msa1097980:intron 35.0%
AGATCATGGATGATAAAACG+TGG + chr7_3:24279759-24279778 Msa1097980:CDS 35.0%
GATCATGGATGATAAAACGT+GGG + chr7_3:24279760-24279779 Msa1097980:CDS 35.0%
ATAAAACGTGGGATTGTCAA+AGG + chr7_3:24279771-24279790 Msa1097980:CDS 35.0%
TAAAACGTGGGATTGTCAAA+GGG + chr7_3:24279772-24279791 Msa1097980:CDS 35.0%
TAAACTTCTGACAAGGCTAA+AGG + chr7_3:24279873-24279892 Msa1097980:intron 35.0%
TCTGGAAGAAATCAAGATTG+TGG - chr7_3:24279954-24279973 None:intergenic 35.0%
! TTTTCAAACATCGCATGAAG+AGG - chr7_3:24280069-24280088 None:intergenic 35.0%
AACTTCTCTTAGTACACCTT+GGG + chr7_3:24280101-24280120 Msa1097980:CDS 35.0%
TAGATCTTAATCATCTCCCA+AGG - chr7_3:24280120-24280139 None:intergenic 35.0%
TGGGAGATGATTAAGATCTA+TGG + chr7_3:24280120-24280139 Msa1097980:CDS 35.0%
GATTAAGATCTATGGACAAG+AGG + chr7_3:24280128-24280147 Msa1097980:CDS 35.0%
!!! TTTTTAACTTCCTCGAAAGG+TGG - chr7_3:24280183-24280202 None:intergenic 35.0%
ACCGAAATCGTATAACATAG+AGG + chr7_3:24280263-24280282 Msa1097980:CDS 35.0%
CCCTCTATGTTATACGATTT+CGG - chr7_3:24280267-24280286 None:intergenic 35.0%
CCGAAATCGTATAACATAGA+GGG + chr7_3:24280264-24280283 Msa1097980:CDS 35.0%
AATCGTATAACATAGAGGGT+TGG + chr7_3:24280268-24280287 Msa1097980:CDS 35.0%
CAAATGCTCATAAGTTACTG+TGG + chr7_3:24280349-24280368 Msa1097980:CDS 35.0%
AAATCCAGGAATGAACACAT+CGG - chr7_3:24280406-24280425 None:intergenic 35.0%
!! AATTTTGCTAGCTTGGTGAT+GGG + chr7_3:24280450-24280469 Msa1097980:CDS 35.0%
! TCTGCATTAGCAGAAGTATA+TGG - chr7_3:24280627-24280646 None:intergenic 35.0%
ATACTTCTGCTAATGCAGAA+AGG + chr7_3:24280628-24280647 Msa1097980:intron 35.0%
!! TACGATTAGCTTGAAACATG+TGG - chr7_3:24280685-24280704 None:intergenic 35.0%
TCTTCCATTCCTTTATCTCT+TGG + chr7_3:24280854-24280873 Msa1097980:CDS 35.0%
AACACCAAGAGATAAAGGAA+TGG - chr7_3:24280861-24280880 None:intergenic 35.0%
! CAAAGTGGTGGAAATAATGA+AGG + chr7_3:24280992-24281011 Msa1097980:CDS 35.0%
!! GATAATGGATTCACATTCTC+CGG + chr7_3:24281125-24281144 Msa1097980:three_prime_UTR 35.0%
TCCGGATTCATGTACATAAT+TGG + chr7_3:24281143-24281162 Msa1097980:three_prime_UTR 35.0%
TCTTCACCTGAAACTAAATC+CGG - chr7_3:24281192-24281211 None:intergenic 35.0%
TTAAATTATGGTTGCAGCTG+TGG + chr7_3:24281250-24281269 Msa1097980:three_prime_UTR 35.0%
CTCTCTCTCTATTGTCTTTG+TGG + chr7_3:24275928-24275947 Msa1097980:five_prime_UTR 40.0%
ACTCAGTTACACTTCTCAAG+AGG + chr7_3:24276051-24276070 Msa1097980:five_prime_UTR 40.0%
CTCAGTTACACTTCTCAAGA+GGG + chr7_3:24276052-24276071 Msa1097980:five_prime_UTR 40.0%
ACACCACTGTCTTTGTTCAT+TGG + chr7_3:24276592-24276611 Msa1097980:intron 40.0%
TACCCAGATTCAAATCCAAG+AGG + chr7_3:24276829-24276848 Msa1097980:CDS 40.0%
ACCCAGATTCAAATCCAAGA+GGG + chr7_3:24276830-24276849 Msa1097980:CDS 40.0%
ACCCTCTTGGATTTGAATCT+GGG - chr7_3:24276834-24276853 None:intergenic 40.0%
TACCCTCTTGGATTTGAATC+TGG - chr7_3:24276835-24276854 None:intergenic 40.0%
!! AATCCAAGAGGGTATTATCC+AGG + chr7_3:24276841-24276860 Msa1097980:CDS 40.0%
TAACCTGGATAATACCCTCT+TGG - chr7_3:24276847-24276866 None:intergenic 40.0%
GATGAAAAGTTGGACTAACC+TGG - chr7_3:24276862-24276881 None:intergenic 40.0%
CCACCAAAAGTTCACAAGTT+TGG - chr7_3:24276962-24276981 None:intergenic 40.0%
! CCAAACTTGTGAACTTTTGG+TGG + chr7_3:24276959-24276978 Msa1097980:intron 40.0%
! AACTTGTGAACTTTTGGTGG+GGG + chr7_3:24276962-24276981 Msa1097980:intron 40.0%
! ATGTATGTTTGGAATCACGG+TGG + chr7_3:24277060-24277079 Msa1097980:intron 40.0%
TCCCGGAAATTGCTACATAT+AGG - chr7_3:24277161-24277180 None:intergenic 40.0%
! TGATACATGTGGTTAGCTCT+TGG + chr7_3:24277290-24277309 Msa1097980:intron 40.0%
! TTGAAAGCATGTCCAGTGTA+CGG - chr7_3:24277682-24277701 None:intergenic 40.0%
CTATAGTGTCAGTGCTTCAT+AGG + chr7_3:24277703-24277722 Msa1097980:intron 40.0%
TCAAGGGACGTAGTTCAAAT+CGG - chr7_3:24277891-24277910 None:intergenic 40.0%
CTACGTCCCTTGAGATTATA+AGG + chr7_3:24277898-24277917 Msa1097980:intron 40.0%
CACCATTCAGCATATGCATT+CGG + chr7_3:24278080-24278099 Msa1097980:intron 40.0%
TTATCTTTCCTGACAGATCC+TGG + chr7_3:24278252-24278271 Msa1097980:intron 40.0%
GATCCTGGTTCACAATCAAA+TGG + chr7_3:24278267-24278286 Msa1097980:intron 40.0%
! ATTTTTGTCCGGATACAAGG+TGG + chr7_3:24278294-24278313 Msa1097980:CDS 40.0%
CATGAAAACCACCTTGTATC+CGG - chr7_3:24278305-24278324 None:intergenic 40.0%
! AAGGTGGTTTTCATGAGATC+AGG + chr7_3:24278310-24278329 Msa1097980:CDS 40.0%
! CTGGTTGTTGATTGGATTTC+AGG - chr7_3:24278481-24278500 None:intergenic 40.0%
TAGCTATCATAGAGAGCCTA+TGG + chr7_3:24278699-24278718 Msa1097980:intron 40.0%
!! AAGCACTTCTGAGACTGTTT+GGG - chr7_3:24278782-24278801 None:intergenic 40.0%
!! TAAGCACTTCTGAGACTGTT+TGG - chr7_3:24278783-24278802 None:intergenic 40.0%
GAATACGGCACTTTAAACGA+TGG - chr7_3:24279031-24279050 None:intergenic 40.0%
! GTCGAACTAGTTGTTTCCAA+CGG + chr7_3:24279109-24279128 Msa1097980:CDS 40.0%
TGATATTCTTCGAAAGAGGG+AGG - chr7_3:24279346-24279365 None:intergenic 40.0%
AAAGTTCGTGAACTTCCTGT+CGG - chr7_3:24279408-24279427 None:intergenic 40.0%
! GCTAAAATTTTGCAGAGGCA+AGG + chr7_3:24279430-24279449 Msa1097980:intron 40.0%
! AGAGAGTCTTTAGCTTACCA+CGG + chr7_3:24279597-24279616 Msa1097980:CDS 40.0%
TCGAGCTTCAATAATGGTCT+TGG + chr7_3:24279694-24279713 Msa1097980:intron 40.0%
! ATGGTCTTGGAATCTTTGCT+AGG + chr7_3:24279707-24279726 Msa1097980:intron 40.0%
TGCATCCTTCGAATATCCAT+AGG - chr7_3:24279995-24280014 None:intergenic 40.0%
GAACTTCTCTTAGTACACCT+TGG + chr7_3:24280100-24280119 Msa1097980:CDS 40.0%
CGAGGAAGTTAAAAAACTCG+CGG + chr7_3:24280188-24280207 Msa1097980:CDS 40.0%
AAGTTAAAAAACTCGCGGCT+TGG + chr7_3:24280193-24280212 Msa1097980:CDS 40.0%
! GTATAACATAGAGGGTTGGT+GGG + chr7_3:24280272-24280291 Msa1097980:CDS 40.0%
!! TATAACATAGAGGGTTGGTG+GGG + chr7_3:24280273-24280292 Msa1097980:CDS 40.0%
TGAACCTGATAGCACAGTAA+TGG + chr7_3:24280317-24280336 Msa1097980:CDS 40.0%
AGTTCCATTACTGTGCTATC+AGG - chr7_3:24280324-24280343 None:intergenic 40.0%
! ATAGCACAGTAATGGAACTG+AGG + chr7_3:24280325-24280344 Msa1097980:CDS 40.0%
! GCATTCGAATTTTGCTAGCT+TGG + chr7_3:24280443-24280462 Msa1097980:CDS 40.0%
!! GAATTTTGCTAGCTTGGTGA+TGG + chr7_3:24280449-24280468 Msa1097980:CDS 40.0%
CAAAGACATTTAGACCTGAC+AGG + chr7_3:24280499-24280518 Msa1097980:CDS 40.0%
! AGCAGAAGTATATGGTTGCA+AGG - chr7_3:24280619-24280638 None:intergenic 40.0%
TGTTTCAAGCTAATCGTACG+TGG + chr7_3:24280687-24280706 Msa1097980:CDS 40.0%
GGATGAGAGAGAAAGGATAA+TGG - chr7_3:24280785-24280804 None:intergenic 40.0%
AAACATGAACATTCAGGGAC+TGG - chr7_3:24280806-24280825 None:intergenic 40.0%
TCCCTGAATGTTCATGTTTG+CGG + chr7_3:24280807-24280826 Msa1097980:CDS 40.0%
TGCGTAACACCAAGAGATAA+AGG - chr7_3:24280866-24280885 None:intergenic 40.0%
GATGACGATGATTCTGTATC+TGG + chr7_3:24280956-24280975 Msa1097980:CDS 40.0%
CATCCAAGGTAATGTGTTGA+TGG + chr7_3:24281088-24281107 Msa1097980:three_prime_UTR 40.0%
GAACCATCAACACATTACCT+TGG - chr7_3:24281094-24281113 None:intergenic 40.0%
AAACTAAATCCGGTATGCAG+CGG - chr7_3:24281182-24281201 None:intergenic 40.0%
! TGCATACCGGATTTAGTTTC+AGG + chr7_3:24281183-24281202 Msa1097980:three_prime_UTR 40.0%
AAAGCCTATCCACCTTACTA+AGG + chr7_3:24281219-24281238 Msa1097980:three_prime_UTR 40.0%
TGTTCCTTAGTAAGGTGGAT+AGG - chr7_3:24281226-24281245 None:intergenic 40.0%
ATCCACCTTACTAAGGAACA+TGG + chr7_3:24281226-24281245 Msa1097980:three_prime_UTR 40.0%
AACCATGTTCCTTAGTAAGG+TGG - chr7_3:24281231-24281250 None:intergenic 40.0%
! GAACTTTTGGTGGGGGTTTA+AGG + chr7_3:24276969-24276988 Msa1097980:intron 45.0%
AGCTCTTGGCTCCATCTAAT+AGG + chr7_3:24277304-24277323 Msa1097980:intron 45.0%
GCTCTTGGCTCCATCTAATA+GGG + chr7_3:24277305-24277324 Msa1097980:intron 45.0%
TCAAATGTGAGCACATCTGC+CGG + chr7_3:24277648-24277667 Msa1097980:intron 45.0%
GACCGAATGCATATGCTGAA+TGG - chr7_3:24278085-24278104 None:intergenic 45.0%
ATTGTGAACCAGGATCTGTC+AGG - chr7_3:24278263-24278282 None:intergenic 45.0%
! ATGAGATCAGGAATTCGGTG+AGG + chr7_3:24278322-24278341 Msa1097980:intron 45.0%
CAATCAACAACCAGCAGCAA+GGG + chr7_3:24278487-24278506 Msa1097980:CDS 45.0%
AAAACTCTTGAACTGCGAGC+TGG - chr7_3:24278900-24278919 None:intergenic 45.0%
! AAAGGGTGCAAGGAGAAAGA+AGG + chr7_3:24279000-24279019 Msa1097980:CDS 45.0%
! GAACTAGTTGTTTCCAACGG+CGG + chr7_3:24279112-24279131 Msa1097980:CDS 45.0%
AACGCAATGAATGGACGACT+AGG - chr7_3:24279561-24279580 None:intergenic 45.0%
CCAGGATCAAACGCAATGAA+TGG - chr7_3:24279570-24279589 None:intergenic 45.0%
CCATTCATTGCGTTTGATCC+TGG + chr7_3:24279567-24279586 Msa1097980:CDS 45.0%
AAAGACTCTCTAGTCATGCC+AGG - chr7_3:24279588-24279607 None:intergenic 45.0%
GCTGAGGAGTTTAAGAGAGA+CGG - chr7_3:24279665-24279684 None:intergenic 45.0%
AGCTCGAATACGAAAAGCTG+AGG - chr7_3:24279681-24279700 None:intergenic 45.0%
TCAGCTGAAGCAAGACTGAA+TGG + chr7_3:24279810-24279829 Msa1097980:CDS 45.0%
ATCCTGTCCTTTAATGCCTG+AGG + chr7_3:24279833-24279852 Msa1097980:CDS 45.0%
ACATATTCTCTCACCTCCTC+AGG - chr7_3:24279852-24279871 None:intergenic 45.0%
! GGCTAAAGGCGTGTTTGTTA+TGG + chr7_3:24279887-24279906 Msa1097980:intron 45.0%
! CACGCAGAAGTATACCAATC+TGG - chr7_3:24279972-24279991 None:intergenic 45.0%
GTATCTGGAGGAGAAGTCTT+TGG + chr7_3:24280024-24280043 Msa1097980:CDS 45.0%
AACCTAGTTAATCCTCCTCC+CGG + chr7_3:24280153-24280172 Msa1097980:CDS 45.0%
TTAACTTCCTCGAAAGGTGG+TGG - chr7_3:24280180-24280199 None:intergenic 45.0%
TTATACGATTTCGGTCTCGC+TGG - chr7_3:24280258-24280277 None:intergenic 45.0%
CGTATAACATAGAGGGTTGG+TGG + chr7_3:24280271-24280290 Msa1097980:CDS 45.0%
TGCTCATAAGTTACTGTGGG+AGG + chr7_3:24280353-24280372 Msa1097980:CDS 45.0%
! GTGGGAGGCTATTGATTATG+CGG + chr7_3:24280368-24280387 Msa1097980:CDS 45.0%
ATTCCTGGATTTGACCGTGA+TGG + chr7_3:24280414-24280433 Msa1097980:CDS 45.0%
TTCCTGGATTTGACCGTGAT+GGG + chr7_3:24280415-24280434 Msa1097980:CDS 45.0%
GGGACACAGGTTATACCAAT+CGG + chr7_3:24280470-24280489 Msa1097980:CDS 45.0%
GCCGCAAACATGAACATTCA+GGG - chr7_3:24280811-24280830 None:intergenic 45.0%
TGCCGCAAACATGAACATTC+AGG - chr7_3:24280812-24280831 None:intergenic 45.0%
!! AAAAATAACTATAAAAATTA+TGG - chr7_3:24279179-24279198 None:intergenic 5.0%
TTTGGTGGGGGTTTAAGGAG+AGG + chr7_3:24276974-24276993 Msa1097980:intron 50.0%
TTGGTGGGGGTTTAAGGAGA+GGG + chr7_3:24276975-24276994 Msa1097980:intron 50.0%
ACGTAGTTCAAATCGGACGG+TGG - chr7_3:24277884-24277903 None:intergenic 50.0%
GGGACGTAGTTCAAATCGGA+CGG - chr7_3:24277887-24277906 None:intergenic 50.0%
! CCTTGCTGCTGGTTGTTGAT+TGG - chr7_3:24278489-24278508 None:intergenic 50.0%
CCAATCAACAACCAGCAGCA+AGG + chr7_3:24278486-24278505 Msa1097980:CDS 50.0%
CAACCAGCAGCAAGGGAATA+AGG + chr7_3:24278494-24278513 Msa1097980:CDS 50.0%
GAACCTTATTCCCTTGCTGC+TGG - chr7_3:24278500-24278519 None:intergenic 50.0%
! TCTTCATGGTGTCGAGCAAG+CGG - chr7_3:24279226-24279245 None:intergenic 50.0%
TCATGCTCTTCAGTTCCGAC+AGG + chr7_3:24279390-24279409 Msa1097980:CDS 50.0%
CTCCTCAGGCATTAAAGGAC+AGG - chr7_3:24279838-24279857 None:intergenic 50.0%
CTGTCCTTTAATGCCTGAGG+AGG + chr7_3:24279836-24279855 Msa1097980:CDS 50.0%
CTCACCTCCTCAGGCATTAA+AGG - chr7_3:24279843-24279862 None:intergenic 50.0%
GGTATACTTCTGCGTGCCTA+TGG + chr7_3:24279976-24279995 Msa1097980:CDS 50.0%
GCGTGCCTATGGATATTCGA+AGG + chr7_3:24279987-24280006 Msa1097980:CDS 50.0%
TCTGGAGGAGAAGTCTTTGG+TGG + chr7_3:24280027-24280046 Msa1097980:CDS 50.0%
GAAGCCGATGTGTTCATTCC+TGG + chr7_3:24280399-24280418 Msa1097980:CDS 50.0%
TTCCCATCACGGTCAAATCC+AGG - chr7_3:24280420-24280439 None:intergenic 50.0%
! TGGATTTGACCGTGATGGGA+AGG + chr7_3:24280419-24280438 Msa1097980:CDS 50.0%
! GGATTTGACCGTGATGGGAA+GGG + chr7_3:24280420-24280439 Msa1097980:CDS 50.0%
! GATTTGACCGTGATGGGAAG+GGG + chr7_3:24280421-24280440 Msa1097980:CDS 50.0%
ATGTCTTTGACGCAGCCGAT+TGG - chr7_3:24280488-24280507 None:intergenic 50.0%
CGTGGCTAAAATCAGTTCGC+AGG + chr7_3:24280705-24280724 Msa1097980:CDS 50.0%
AGGGACTGGATGAGAGAGAA+AGG - chr7_3:24280792-24280811 None:intergenic 50.0%
GAGGATCAAGAAGAGCTCGA+GGG + chr7_3:24281052-24281071 Msa1097980:CDS 50.0%
TAAATCCGGTATGCAGCGGT+TGG - chr7_3:24281178-24281197 None:intergenic 50.0%
ATGCGGCAAAATGTGGCATG+CGG + chr7_3:24281293-24281312 Msa1097980:three_prime_UTR 50.0%
TGCGGTCGAAATTGTGGTTG+CGG + chr7_3:24281311-24281330 Msa1097980:three_prime_UTR 50.0%
GAATTGCGGGCGCAATGTAA+AGG - chr7_3:24281360-24281379 None:intergenic 50.0%
ATCACAGAGTTCGCGCCTCA+CGG + chr7_3:24277931-24277950 Msa1097980:intron 55.0%
!! TGTGCAAGTGTTGGTCCGTG+AGG - chr7_3:24277949-24277968 None:intergenic 55.0%
GGAAAAGTTCAGCACAGCCG+TGG - chr7_3:24279617-24279636 None:intergenic 55.0%
! CGGCTGTGCTGAACTTTTCC+AGG + chr7_3:24279617-24279636 Msa1097980:CDS 55.0%
GTCCGGGAGGAGGATTAACT+AGG - chr7_3:24280158-24280177 None:intergenic 55.0%
! TTCCTCGAAAGGTGGTGGTC+CGG - chr7_3:24280175-24280194 None:intergenic 55.0%
TACGATTTCGGTCTCGCTGG+AGG - chr7_3:24280255-24280274 None:intergenic 55.0%
TCGAATGCCCCTTCCCATCA+CGG - chr7_3:24280431-24280450 None:intergenic 55.0%
!! CTAGCTTGGTGATGGGACAC+AGG + chr7_3:24280457-24280476 Msa1097980:CDS 55.0%
TTACGCACCAGTGTCCTGCA+TGG + chr7_3:24280879-24280898 Msa1097980:CDS 55.0%
TGACCATCCATGCAGGACAC+TGG - chr7_3:24280889-24280908 None:intergenic 55.0%
! GGACTAGTGACCATCCATGC+AGG - chr7_3:24280896-24280915 None:intergenic 55.0%
CGAGGATCAAGAAGAGCTCG+AGG + chr7_3:24281051-24281070 Msa1097980:CDS 55.0%
GATCAAGAAGAGCTCGAGGG+TGG + chr7_3:24281055-24281074 Msa1097980:CDS 55.0%
GTGGCGACAGATGACATCCA+AGG + chr7_3:24281074-24281093 Msa1097980:exon 55.0%
TGCTTCCAACCGCTGCATAC+CGG + chr7_3:24281170-24281189 Msa1097980:three_prime_UTR 55.0%
GTGGCATGCGGTCGAAATTG+TGG + chr7_3:24281305-24281324 Msa1097980:three_prime_UTR 55.0%
GTGAGCACATCTGCCGGTGT+CGG + chr7_3:24277654-24277673 Msa1097980:intron 60.0%
TTCCAACGGCGGATGCTTGC+AGG + chr7_3:24279123-24279142 Msa1097980:CDS 60.0%
TACCTGCAAGCATCCGCCGT+TGG - chr7_3:24279128-24279147 None:intergenic 60.0%
! TCCTCGAAAGGTGGTGGTCC+GGG - chr7_3:24280174-24280193 None:intergenic 60.0%
! CTCGCGGCTTGGAAGAATGC+AGG + chr7_3:24280204-24280223 Msa1097980:CDS 60.0%
GATTTCGGTCTCGCTGGAGG+AGG - chr7_3:24280252-24280271 None:intergenic 60.0%
!! ACATAGAGGGTTGGTGGGGC+TGG + chr7_3:24280277-24280296 Msa1097980:CDS 60.0%
!! CATAGAGGGTTGGTGGGGCT+GGG + chr7_3:24280278-24280297 Msa1097980:CDS 60.0%
GCACCAGTGTCCTGCATGGA+TGG + chr7_3:24280883-24280902 Msa1097980:CDS 60.0%
!! CCAGTGTACGGCACCGACAC+CGG - chr7_3:24277670-24277689 None:intergenic 65.0%
! AAAGGTGGTGGTCCGGGAGG+AGG - chr7_3:24280168-24280187 None:intergenic 65.0%
! TCGAAAGGTGGTGGTCCGGG+AGG - chr7_3:24280171-24280190 None:intergenic 65.0%
TCCCGGACCACCACCTTTCG+AGG + chr7_3:24280170-24280189 Msa1097980:CDS 65.0%
GGAGGAAGTGGACGAGGACG+TGG - chr7_3:24280231-24280250 None:intergenic 65.0%
GGAGGAGGAGGAAGTGGACG+AGG - chr7_3:24280237-24280256 None:intergenic 65.0%
CTCGCTGGAGGAGGAGGAAG+TGG - chr7_3:24280243-24280262 None:intergenic 65.0%
TTCGGTCTCGCTGGAGGAGG+AGG - chr7_3:24280249-24280268 None:intergenic 65.0%
!! CCGGTGTCGGTGCCGTACAC+TGG + chr7_3:24277667-24277686 Msa1097980:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 24275918 24281653 24275918 ID=Msa1097980;Name=Msa1097980
chr7_3 mRNA 24275918 24281653 24275918 ID=Msa1097980-mRNA-1;Parent=Msa1097980;Name=Msa1097980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=214|1|1|1|1|1|10|566|667
chr7_3 exon 24275918 24276323 24275918 ID=Msa1097980-mRNA-1:exon:5249;Parent=Msa1097980-mRNA-1
chr7_3 exon 24276778 24276862 24276778 ID=Msa1097980-mRNA-1:exon:5250;Parent=Msa1097980-mRNA-1
chr7_3 exon 24278268 24278338 24278268 ID=Msa1097980-mRNA-1:exon:5251;Parent=Msa1097980-mRNA-1
chr7_3 exon 24278427 24278515 24278427 ID=Msa1097980-mRNA-1:exon:5252;Parent=Msa1097980-mRNA-1
chr7_3 exon 24278901 24279144 24278901 ID=Msa1097980-mRNA-1:exon:5253;Parent=Msa1097980-mRNA-1
chr7_3 exon 24279334 24279446 24279334 ID=Msa1097980-mRNA-1:exon:5254;Parent=Msa1097980-mRNA-1
chr7_3 exon 24279548 24279638 24279548 ID=Msa1097980-mRNA-1:exon:5255;Parent=Msa1097980-mRNA-1
chr7_3 exon 24279729 24279857 24279729 ID=Msa1097980-mRNA-1:exon:5256;Parent=Msa1097980-mRNA-1
chr7_3 exon 24279973 24280520 24279973 ID=Msa1097980-mRNA-1:exon:5257;Parent=Msa1097980-mRNA-1
chr7_3 exon 24280646 24281653 24280646 ID=Msa1097980-mRNA-1:exon:5258;Parent=Msa1097980-mRNA-1
chr7_3 five_prime_UTR 24275918 24276131 24275918 ID=Msa1097980-mRNA-1:five_prime_utr;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24276132 24276323 24276132 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24276778 24276862 24276778 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24278268 24278338 24278268 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24278427 24278515 24278427 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24278901 24279144 24278901 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24279334 24279446 24279334 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24279548 24279638 24279548 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24279729 24279857 24279729 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24279973 24280520 24279973 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 CDS 24280646 24281087 24280646 ID=Msa1097980-mRNA-1:cds;Parent=Msa1097980-mRNA-1
chr7_3 three_prime_UTR 24281088 24281653 24281088 ID=Msa1097980-mRNA-1:three_prime_utr;Parent=Msa1097980-mRNA-1
Gene Sequence

>Msa1097980

ATGAAAGGGGAAATAAAAATGAAGTCAAAAATGAAATGGGTTGGTTTAGTTGGGATAGTACTTTCAGCTTTTTCAATCTTCATTCATTTTCTATTAGCTAGATTCACTCAACTTAGTGTTTCTGATTTTCAATCTTCAATCACTATCTTCTCTTGGAGACCCATCTTTGATAAACCAGATTTTCCTACTAATAGTGGTTCATATAGAAGATTATGGGGACAGGTAAAGAGTCTTGAATCTTTGTACCCAGATTCAAATCCAAGAGGGTATTATCCAGATCCTGGTTCACAATCAAATGGATTTATTTTTGTCCGGATACAAGGTGGTTTTCATGAGATCAGGAATTCGATAAGTGATGTGGTTGTTATTGCTCGACTTCTCAATGCTACATTAGCAATGCCTGAAATCCAATCAACAACCAGCAGCAAGGGAATAAGCTCGCAGTTCAAGAGTTTTGCATACCTATATAATGAGGACCAATTTATATTCTCATTAGCAAAAGATGTCAAAGTAATAAGAACTCTTCCAAAATATCTAAAGGGTGCAAGGAGAAAGAAGGAGATTCCATCGTTTAAAGTGCCGTATTCGGCATCACCTTTTTATTACTTGCATCATGTTCTACCTGTATTAAAGAAGCATTCAGTGGTCGAACTAGTTGTTTCCAACGGCGGATGCTTGCAGGCTACTCTTCCTCCCTCTTTCGAAGAATATCAAAGGCTGAGATGTCGAGTTTCTTTTCATGCTCTTCAGTTCCGACAGGAAGTTCACGAACTTTCTGCTAAAATTTTGCAGAGGTTACGAGCTCCTAGTCGTCCATTCATTGCGTTTGATCCTGGCATGACTAGAGAGTCTTTAGCTTACCACGGCTGTGCTGAACTTTTCCAGGATGTGCATACTGAATTAATTCAACATAAAAGATCATGGATGATAAAACGTGGGATTGTCAAAGGGAAACTTAGAGTCAACTCAGCTGAAGCAAGACTGAATGGATCCTGTCCTTTAATGCCTGAGGAGATTGGTATACTTCTGCGTGCCTATGGATATTCGAAGGATGCAATTATATATGTATCTGGAGGAGAAGTCTTTGGTGGTCAAAGAACATTGATTCCTCTTCATGCGATGTTTGAAAATGTTGTCGATAGAACTTCTCTTAGTACACCTTGGGAGATGATTAAGATCTATGGACAAGAGGTTAACCTAGTTAATCCTCCTCCCGGACCACCACCTTTCGAGGAAGTTAAAAAACTCGCGGCTTGGAAGAATGCAGGTCCACGTCCTCGTCCACTTCCTCCTCCTCCAGCGAGACCGAAATCGTATAACATAGAGGGTTGGTGGGGCTGGGTAGCCGAAAGTGATAATGAACCTGATAGCACAGTAATGGAACTGAGGACAAATGCTCATAAGTTACTGTGGGAGGCTATTGATTATGCGGTTTGCGTTGAAGCCGATGTGTTCATTCCTGGATTTGACCGTGATGGGAAGGGGCATTCGAATTTTGCTAGCTTGGTGATGGGACACAGGTTATACCAATCGGCTGCGTCAAAGACATTTAGACCTGACAGAAAGGAAGCTGCTAAATTTGTAGACGAGATTCGCGACCACATGTTTCAAGCTAATCGTACGTGGCTAAAATCAGTTCGCAGGCATTTGAGAAAAACATTAATCGATGGAATAATTGAAGCGTCAAGTAAATCAAAACCATTATCCTTTCTCTCTCATCCAGTCCCTGAATGTTCATGTTTGCGGCACGACTCTGAAGCATCAAAGAATTCTTCCATTCCTTTATCTCTTGGTGTTACGCACCAGTGTCCTGCATGGATGGTCACTAGTCCAGTTTCTCAATCGAAAGATAAGGAAAATGAAGATGATGGTGATGACGATGATTCTGTATCTGGTTTATTCTTTAAACAAAGTGGTGGAAATAATGAAGGTGATGCAGAAGTAAACACTAAAGAAGAAAATCAATTCGAGGATCAAGAAGAGCTCGAGGGTGGCGACAGATGA
Protein sequence

>Msa1097980

MKGEIKMKSKMKWVGLVGIVLSAFSIFIHFLLARFTQLSVSDFQSSITIFSWRPIFDKPDFPTNSGSYRRLWGQVKSLESLYPDSNPRGYYPDPGSQSNGFIFVRIQGGFHEIRNSISDVVVIARLLNATLAMPEIQSTTSSKGISSQFKSFAYLYNEDQFIFSLAKDVKVIRTLPKYLKGARRKKEIPSFKVPYSASPFYYLHHVLPVLKKHSVVELVVSNGGCLQATLPPSFEEYQRLRCRVSFHALQFRQEVHELSAKILQRLRAPSRPFIAFDPGMTRESLAYHGCAELFQDVHTELIQHKRSWMIKRGIVKGKLRVNSAEARLNGSCPLMPEEIGILLRAYGYSKDAIIYVSGGEVFGGQRTLIPLHAMFENVVDRTSLSTPWEMIKIYGQEVNLVNPPPGPPPFEEVKKLAAWKNAGPRPRPLPPPPARPKSYNIEGWWGWVAESDNEPDSTVMELRTNAHKLLWEAIDYAVCVEADVFIPGFDRDGKGHSNFASLVMGHRLYQSAASKTFRPDRKEAAKFVDEIRDHMFQANRTWLKSVRRHLRKTLIDGIIEASSKSKPLSFLSHPVPECSCLRHDSEASKNSSIPLSLGVTHQCPAWMVTSPVSQSKDKENEDDGDDDDSVSGLFFKQSGGNNEGDAEVNTKEENQFEDQEELEGGDR*