Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491240 | XP_024634071.2 | 97.605 | 167 | 4 | 0 | 1 | 167 | 1 | 167 | 2.53e-115 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491240 | sp|O80366|ARR9_ARATH | 70.270 | 148 | 43 | 1 | 2 | 148 | 7 | 154 | 7.27e-71 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491240 | A0A396IJ66 | 97.605 | 167 | 4 | 0 | 1 | 167 | 1 | 167 | 1.21e-115 | 333 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0491240 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0462220 | Msa0491240 | 0.843068 | 1.758745e-58 | -8.615850e-47 |
| Msa0349430 | Msa0491240 | 0.831019 | 2.115760e-55 | -8.615850e-47 |
| Msa0491240 | Msa1151000 | 0.840786 | 7.049846e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491240 | MtrunA17_Chr3g0082861 | 97.605 | 167 | 4 | 0 | 1 | 167 | 1 | 167 | 2.33e-119 | 333 |
| Msa0491240 | MtrunA17_Chr8g0352871 | 73.939 | 165 | 42 | 1 | 3 | 167 | 8 | 171 | 2.27e-84 | 246 |
| Msa0491240 | MtrunA17_Chr7g0256551 | 69.136 | 162 | 48 | 1 | 2 | 163 | 7 | 166 | 1.18e-78 | 233 |
| Msa0491240 | MtrunA17_Chr3g0124861 | 57.595 | 158 | 53 | 3 | 4 | 150 | 22 | 176 | 3.31e-57 | 179 |
| Msa0491240 | MtrunA17_Chr5g0414931 | 57.971 | 138 | 53 | 1 | 3 | 140 | 15 | 147 | 1.53e-52 | 167 |
| Msa0491240 | MtrunA17_Chr3g0118211 | 50.920 | 163 | 71 | 2 | 1 | 163 | 20 | 173 | 1.44e-51 | 163 |
| Msa0491240 | MtrunA17_Chr4g0059571 | 53.374 | 163 | 67 | 3 | 2 | 164 | 24 | 177 | 2.06e-51 | 163 |
| Msa0491240 | MtrunA17_Chr1g0170741 | 58.696 | 138 | 51 | 1 | 3 | 140 | 7 | 138 | 4.09e-51 | 162 |
| Msa0491240 | MtrunA17_Chr3g0128691 | 55.634 | 142 | 46 | 3 | 5 | 141 | 19 | 148 | 3.54e-50 | 158 |
| Msa0491240 | MtrunA17_Chr4g0021731 | 73.864 | 88 | 14 | 1 | 3 | 90 | 10 | 88 | 1.94e-40 | 131 |
| Msa0491240 | MtrunA17_Chr4g0030271 | 29.927 | 137 | 78 | 2 | 6 | 142 | 91 | 209 | 1.61e-14 | 70.5 |
| Msa0491240 | MtrunA17_Chr8g0345901 | 27.007 | 137 | 82 | 1 | 6 | 142 | 38 | 156 | 2.55e-14 | 69.7 |
| Msa0491240 | MtrunA17_Chr1g0181811 | 28.467 | 137 | 80 | 2 | 6 | 142 | 87 | 205 | 4.01e-13 | 66.2 |
| Msa0491240 | MtrunA17_Chr3g0127941 | 29.197 | 137 | 79 | 2 | 6 | 142 | 58 | 176 | 5.85e-13 | 65.9 |
| Msa0491240 | MtrunA17_Chr7g0276361 | 26.144 | 153 | 88 | 3 | 10 | 162 | 22 | 149 | 8.67e-12 | 62.4 |
| Msa0491240 | MtrunA17_Chr7g0275401 | 29.221 | 154 | 85 | 4 | 4 | 154 | 9 | 141 | 1.39e-11 | 61.2 |
| Msa0491240 | MtrunA17_Chr7g0275891 | 28.777 | 139 | 79 | 3 | 6 | 144 | 11 | 129 | 4.04e-11 | 60.1 |
| Msa0491240 | MtrunA17_Chr1g0149851 | 28.671 | 143 | 81 | 3 | 6 | 148 | 11 | 132 | 4.45e-11 | 60.1 |
| Msa0491240 | MtrunA17_Chr1g0161431 | 28.125 | 160 | 93 | 4 | 2 | 161 | 13 | 150 | 5.40e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491240 | AT3G57040.2 | 70.270 | 148 | 43 | 1 | 2 | 148 | 7 | 154 | 7.39e-72 | 216 |
| Msa0491240 | AT3G57040.1 | 70.270 | 148 | 43 | 1 | 2 | 148 | 7 | 154 | 7.39e-72 | 216 |
| Msa0491240 | AT2G41310.1 | 65.772 | 149 | 50 | 1 | 2 | 150 | 7 | 154 | 6.31e-68 | 206 |
| Msa0491240 | AT1G59940.1 | 56.604 | 159 | 55 | 4 | 3 | 160 | 32 | 177 | 2.59e-55 | 174 |
| Msa0491240 | AT1G10470.3 | 55.556 | 162 | 57 | 5 | 1 | 161 | 17 | 164 | 3.41e-54 | 172 |
| Msa0491240 | AT1G10470.1 | 56.250 | 160 | 55 | 5 | 3 | 161 | 33 | 178 | 4.20e-54 | 172 |
| Msa0491240 | AT1G59940.2 | 60.714 | 140 | 46 | 2 | 3 | 142 | 124 | 254 | 1.48e-53 | 172 |
| Msa0491240 | AT3G48100.1 | 54.601 | 163 | 59 | 4 | 4 | 163 | 25 | 175 | 2.44e-53 | 167 |
| Msa0491240 | AT3G56380.1 | 54.930 | 142 | 56 | 2 | 3 | 144 | 19 | 152 | 1.25e-51 | 162 |
| Msa0491240 | AT5G62920.1 | 58.865 | 141 | 49 | 3 | 4 | 144 | 25 | 156 | 1.26e-50 | 160 |
| Msa0491240 | AT2G40670.1 | 52.817 | 142 | 61 | 1 | 3 | 144 | 28 | 163 | 2.20e-50 | 159 |
| Msa0491240 | AT3G56380.2 | 54.545 | 143 | 56 | 3 | 3 | 144 | 19 | 153 | 8.38e-50 | 157 |
| Msa0491240 | AT1G74890.1 | 50.625 | 160 | 68 | 2 | 3 | 160 | 17 | 167 | 3.53e-49 | 158 |
| Msa0491240 | AT1G19050.1 | 50.000 | 158 | 69 | 2 | 3 | 159 | 23 | 171 | 4.68e-49 | 157 |
| Msa0491240 | AT2G40670.2 | 52.448 | 143 | 61 | 2 | 3 | 144 | 28 | 164 | 1.48e-48 | 155 |
| Msa0491240 | AT2G07440.1 | 66.667 | 60 | 20 | 0 | 91 | 150 | 9 | 68 | 5.46e-22 | 86.3 |
| Msa0491240 | AT1G10470.2 | 52.857 | 70 | 27 | 2 | 90 | 158 | 35 | 99 | 2.82e-16 | 72.8 |
| Msa0491240 | AT5G24470.1 | 29.496 | 139 | 78 | 3 | 6 | 144 | 54 | 172 | 3.21e-13 | 67.0 |
| Msa0491240 | AT2G46790.3 | 26.619 | 139 | 84 | 2 | 4 | 142 | 37 | 157 | 1.77e-12 | 64.7 |
| Msa0491240 | AT2G46790.1 | 26.619 | 139 | 84 | 2 | 4 | 142 | 37 | 157 | 2.17e-12 | 64.3 |
| Msa0491240 | AT5G60100.7 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 6.04e-12 | 63.2 |
| Msa0491240 | AT5G60100.6 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 6.04e-12 | 63.2 |
| Msa0491240 | AT5G60100.4 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 6.04e-12 | 63.2 |
| Msa0491240 | AT5G60100.2 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 6.73e-12 | 63.2 |
| Msa0491240 | AT2G25180.1 | 28.105 | 153 | 88 | 4 | 6 | 157 | 19 | 150 | 7.27e-12 | 62.8 |
| Msa0491240 | AT5G02810.1 | 27.007 | 137 | 82 | 2 | 6 | 142 | 80 | 198 | 7.54e-12 | 62.8 |
| Msa0491240 | AT5G07210.2 | 30.000 | 140 | 76 | 3 | 5 | 144 | 17 | 134 | 1.17e-11 | 62.4 |
| Msa0491240 | AT5G60100.5 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 1.24e-11 | 62.4 |
| Msa0491240 | AT5G60100.3 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 1.24e-11 | 62.4 |
| Msa0491240 | AT5G60100.1 | 28.467 | 137 | 80 | 1 | 6 | 142 | 66 | 184 | 1.24e-11 | 62.4 |
Find 48 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGCACAGTTTCATATTT+TGG | 0.112277 | 3_4:+13555035 | Msa0491240:exon |
| AACATTTACTGTCCAAATTA+TGG | 0.196728 | 3_4:+13555017 | Msa0491240:exon |
| TATGAAACTGTGCCATAATT+TGG | 0.209887 | 3_4:-13555029 | None:intergenic |
| AAGAATGTTTGAGGATAATA+AGG | 0.213912 | 3_4:-13554970 | None:intergenic |
| TCAGTTACTGTGGTTGATTC+TGG | 0.242120 | 3_4:+13555587 | Msa0491240:intron |
| CTCAAAACCTCTTCATTTCA+TGG | 0.264136 | 3_4:+13555102 | Msa0491240:CDS |
| GGCTTTGAAGTTTCTTGGTT+TGG | 0.271821 | 3_4:+13555616 | Msa0491240:CDS |
| ATATTGGACGGATAACTCTT+TGG | 0.293150 | 3_4:-13557030 | None:intergenic |
| ACAAAGGCTTTGAAGTTTCT+TGG | 0.316260 | 3_4:+13555611 | Msa0491240:CDS |
| GGTTACCTGTTAATCCTTGA+TGG | 0.331015 | 3_4:-13556463 | None:intergenic |
| TCCTAGGAAATCTGACAGTT+TGG | 0.350175 | 3_4:-13554850 | None:intergenic |
| TTAACATCTGATTGTTGAAC+TGG | 0.359149 | 3_4:-13556634 | None:intergenic |
| ATAGGAGTTTACAAACAAAA+TGG | 0.363836 | 3_4:-13557133 | None:intergenic |
| ATGTTCCATCAAGGATTAAC+AGG | 0.384039 | 3_4:+13556458 | Msa0491240:CDS |
| AGCTCTTCTCACTAATTTGT+TGG | 0.387474 | 3_4:-13556846 | None:intergenic |
| TATTGGACGGATAACTCTTT+GGG | 0.394569 | 3_4:-13557029 | None:intergenic |
| AAAGAAGTTAAGAATGTTTG+AGG | 0.402917 | 3_4:-13554979 | None:intergenic |
| GTCACATATCAGTTTCAAAT+AGG | 0.414453 | 3_4:-13557151 | None:intergenic |
| AGATCATAGCCAGTCATTCC+TGG | 0.422849 | 3_4:-13555850 | None:intergenic |
| TACTGTATGCCAGGAATGAC+TGG | 0.429066 | 3_4:+13555841 | Msa0491240:CDS |
| AGAAGAGCTTGCTGATGAAT+AGG | 0.435827 | 3_4:+13556860 | Msa0491240:three_prime_UTR |
| GGAAGAATCACATCATTTGT+TGG | 0.438550 | 3_4:-13557102 | None:intergenic |
| ATAGGTCATTGATTGATAGT+AGG | 0.451798 | 3_4:+13556878 | Msa0491240:three_prime_UTR |
| TGTGGTTGATTCTGGTACAA+AGG | 0.488346 | 3_4:+13555595 | Msa0491240:CDS |
| TCCAAACTGTCAGATTTCCT+AGG | 0.495654 | 3_4:+13554849 | Msa0491240:five_prime_UTR |
| TTCTCACTAATTTGTTGGTG+AGG | 0.504206 | 3_4:-13556841 | None:intergenic |
| AGGAGATACAAAATCCTCCT+AGG | 0.511110 | 3_4:-13554866 | None:intergenic |
| TAGGGTGGACATCATATTCA+AGG | 0.515357 | 3_4:-13554886 | None:intergenic |
| TGAATCAGATGCTTAGAAGA+AGG | 0.516221 | 3_4:+13556589 | Msa0491240:intron |
| ATAACTGATTACTGTATGCC+AGG | 0.518630 | 3_4:+13555832 | Msa0491240:CDS |
| ACCTAATCAACAACAAAAGA+AGG | 0.519626 | 3_4:+13556704 | Msa0491240:CDS |
| AGAATGTTTGAGGATAATAA+GGG | 0.521500 | 3_4:-13554969 | None:intergenic |
| TTGACAGAATGTTGATTGAA+AGG | 0.523765 | 3_4:+13555076 | Msa0491240:CDS |
| TATTGCTGCAGAAACAGATC+AGG | 0.532851 | 3_4:+13555673 | Msa0491240:CDS |
| AAAATTACCATGAAATGAAG+AGG | 0.534519 | 3_4:-13555109 | None:intergenic |
| GGACGGATAACTCTTTGGGC+TGG | 0.537870 | 3_4:-13557025 | None:intergenic |
| ATTCTGCAATGAAATCTGTC+AGG | 0.543289 | 3_4:+13554817 | Msa0491240:five_prime_UTR |
| GATTTCATTGCAGAATCTGC+CGG | 0.543870 | 3_4:-13554810 | None:intergenic |
| GTTTCTGCAGCAATAGAATG+AGG | 0.544508 | 3_4:-13555665 | None:intergenic |
| AAGATAAAGATGAATGAGAG+AGG | 0.554093 | 3_4:-13554923 | None:intergenic |
| AAACTGTCAGATTTCCTAGG+AGG | 0.585928 | 3_4:+13554852 | Msa0491240:five_prime_UTR |
| CCTCAGAGAATGTTCCATCA+AGG | 0.587746 | 3_4:+13556449 | Msa0491240:CDS |
| TCTGAGGACATAATCACCAC+TGG | 0.603381 | 3_4:-13556433 | None:intergenic |
| GTTTGAGGATAATAAGGGAA+GGG | 0.626959 | 3_4:-13554964 | None:intergenic |
| TGTTTGAGGATAATAAGGGA+AGG | 0.645942 | 3_4:-13554965 | None:intergenic |
| GTTTGGTTGAAGATGATGTG+AGG | 0.669819 | 3_4:+13555633 | Msa0491240:CDS |
| TTCTCTTAAAGATATACCAG+TGG | 0.679497 | 3_4:+13556417 | Msa0491240:CDS |
| CCTTGATGGAACATTCTCTG+AGG | 0.703773 | 3_4:-13556449 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAAAAAATTTAGAAAATA+TGG | + | chr3_4:13555307-13555326 | Msa0491240:intron | 10.0% |
| !! | CTTAAAAAATTTAGAAAATA+TGG | + | chr3_4:13555307-13555326 | Msa0491240:intron | 10.0% |
| !!! | TATTTGAATTTTGATGTAAA+AGG | - | chr3_4:13555175-13555194 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTTTGTGAAT+TGG | + | chr3_4:13555186-13555205 | Msa0491240:intron | 15.0% |
| !! | ACAAAAATAATATGATTATG+TGG | + | chr3_4:13555362-13555381 | Msa0491240:intron | 15.0% |
| !!! | CAAATTTTTCCATTAATAAA+GGG | - | chr3_4:13555749-13555768 | None:intergenic | 15.0% |
| !!! | AAAATATATATTTGATTTGC+AGG | + | chr3_4:13556387-13556406 | Msa0491240:intron | 15.0% |
| !! | TTAATGTCATGATATTATTA+AGG | - | chr3_4:13556487-13556506 | None:intergenic | 15.0% |
| !!! | TATTTGAATTTTGATGTAAA+AGG | - | chr3_4:13555175-13555194 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTTTGTGAAT+TGG | + | chr3_4:13555186-13555205 | Msa0491240:intron | 15.0% |
| !! | ACAAAAATAATATGATTATG+TGG | + | chr3_4:13555362-13555381 | Msa0491240:intron | 15.0% |
| !!! | CAAATTTTTCCATTAATAAA+GGG | - | chr3_4:13555749-13555768 | None:intergenic | 15.0% |
| !!! | AAAATATATATTTGATTTGC+AGG | + | chr3_4:13556387-13556406 | Msa0491240:intron | 15.0% |
| !! | TTAATGTCATGATATTATTA+AGG | - | chr3_4:13556487-13556506 | None:intergenic | 15.0% |
| !!! | TTTTCTCTCATATTTTTTAG+AGG | + | chr3_4:13555131-13555150 | Msa0491240:intron | 20.0% |
| !!! | AAATTTTGTAAAGAACAAAC+TGG | - | chr3_4:13555262-13555281 | None:intergenic | 20.0% |
| !!! | CAATTTTGAACGAATTTTTT+TGG | + | chr3_4:13555406-13555425 | Msa0491240:intron | 20.0% |
| !! | AGTGATTAGATTAATACATA+TGG | + | chr3_4:13555712-13555731 | Msa0491240:intron | 20.0% |
| !! | TAACTTTAACCCTTTATTAA+TGG | + | chr3_4:13555737-13555756 | Msa0491240:intron | 20.0% |
| !!! | CCAAATTTTTCCATTAATAA+AGG | - | chr3_4:13555750-13555769 | None:intergenic | 20.0% |
| !! | CCTTTATTAATGGAAAAATT+TGG | + | chr3_4:13555747-13555766 | Msa0491240:intron | 20.0% |
| !! | CTGCAAAAATAATTAATCAA+AGG | - | chr3_4:13555791-13555810 | None:intergenic | 20.0% |
| !!! | CTTTGATTAATTATTTTTGC+AGG | + | chr3_4:13555789-13555808 | Msa0491240:intron | 20.0% |
| !! | AAAAATCAAGGTAAATTCAT+AGG | + | chr3_4:13555879-13555898 | Msa0491240:intron | 20.0% |
| !!! | ATGACCAATATTTTAAATTG+TGG | + | chr3_4:13556084-13556103 | Msa0491240:intron | 20.0% |
| !!! | AGAACCACAATTTAAAATAT+TGG | - | chr3_4:13556091-13556110 | None:intergenic | 20.0% |
| !!! | AAAATAAAACTTTTGTGGTT+TGG | - | chr3_4:13556126-13556145 | None:intergenic | 20.0% |
| !!! | TTGTGAAAATAAAACTTTTG+TGG | - | chr3_4:13556131-13556150 | None:intergenic | 20.0% |
| !! | TATGGTTACTATCAAAAAAT+TGG | - | chr3_4:13556321-13556340 | None:intergenic | 20.0% |
| !!! | ATACAAGCAATTTTATGTTA+TGG | - | chr3_4:13556339-13556358 | None:intergenic | 20.0% |
| !! | AAATTTCGAATTCAAAACTT+TGG | + | chr3_4:13556515-13556534 | Msa0491240:intron | 20.0% |
| !! | AAAAATGTAACCTATAAAAG+TGG | + | chr3_4:13556763-13556782 | Msa0491240:three_prime_UTR | 20.0% |
| !!! | TTTAATGTAACCACTTTTAT+AGG | - | chr3_4:13556776-13556795 | None:intergenic | 20.0% |
| !!! | ATTAAAAATTGATGATGCAT+AGG | + | chr3_4:13556790-13556809 | Msa0491240:three_prime_UTR | 20.0% |
| !!! | TTCAATTTTTGTCTCATAAA+TGG | + | chr3_4:13556924-13556943 | Msa0491240:three_prime_UTR | 20.0% |
| !! | TTAATGCATGAATTACATAT+TGG | - | chr3_4:13557049-13557068 | None:intergenic | 20.0% |
| !! | ACAAACAAAATGGAAAAATT+TGG | - | chr3_4:13557126-13557145 | None:intergenic | 20.0% |
| !!! | TTTTCTCTCATATTTTTTAG+AGG | + | chr3_4:13555131-13555150 | Msa0491240:intron | 20.0% |
| !!! | AAATTTTGTAAAGAACAAAC+TGG | - | chr3_4:13555262-13555281 | None:intergenic | 20.0% |
| !!! | CAATTTTGAACGAATTTTTT+TGG | + | chr3_4:13555406-13555425 | Msa0491240:intron | 20.0% |
| !! | AGTGATTAGATTAATACATA+TGG | + | chr3_4:13555712-13555731 | Msa0491240:intron | 20.0% |
| !! | TAACTTTAACCCTTTATTAA+TGG | + | chr3_4:13555737-13555756 | Msa0491240:intron | 20.0% |
| !!! | CCAAATTTTTCCATTAATAA+AGG | - | chr3_4:13555750-13555769 | None:intergenic | 20.0% |
| !! | CCTTTATTAATGGAAAAATT+TGG | + | chr3_4:13555747-13555766 | Msa0491240:intron | 20.0% |
| !! | CTGCAAAAATAATTAATCAA+AGG | - | chr3_4:13555791-13555810 | None:intergenic | 20.0% |
| !!! | CTTTGATTAATTATTTTTGC+AGG | + | chr3_4:13555789-13555808 | Msa0491240:intron | 20.0% |
| !! | AAAAATCAAGGTAAATTCAT+AGG | + | chr3_4:13555879-13555898 | Msa0491240:intron | 20.0% |
| !!! | ATGACCAATATTTTAAATTG+TGG | + | chr3_4:13556084-13556103 | Msa0491240:intron | 20.0% |
| !!! | AGAACCACAATTTAAAATAT+TGG | - | chr3_4:13556091-13556110 | None:intergenic | 20.0% |
| !!! | AAAATAAAACTTTTGTGGTT+TGG | - | chr3_4:13556126-13556145 | None:intergenic | 20.0% |
| !!! | TTGTGAAAATAAAACTTTTG+TGG | - | chr3_4:13556131-13556150 | None:intergenic | 20.0% |
| !! | TATGGTTACTATCAAAAAAT+TGG | - | chr3_4:13556321-13556340 | None:intergenic | 20.0% |
| !!! | ATACAAGCAATTTTATGTTA+TGG | - | chr3_4:13556339-13556358 | None:intergenic | 20.0% |
| !! | AAATTTCGAATTCAAAACTT+TGG | + | chr3_4:13556515-13556534 | Msa0491240:intron | 20.0% |
| !! | AAAAATGTAACCTATAAAAG+TGG | + | chr3_4:13556763-13556782 | Msa0491240:three_prime_UTR | 20.0% |
| !!! | TTTAATGTAACCACTTTTAT+AGG | - | chr3_4:13556776-13556795 | None:intergenic | 20.0% |
| !!! | ATTAAAAATTGATGATGCAT+AGG | + | chr3_4:13556790-13556809 | Msa0491240:three_prime_UTR | 20.0% |
| !!! | TTCAATTTTTGTCTCATAAA+TGG | + | chr3_4:13556924-13556943 | Msa0491240:three_prime_UTR | 20.0% |
| !! | TTAATGCATGAATTACATAT+TGG | - | chr3_4:13557049-13557068 | None:intergenic | 20.0% |
| !! | ACAAACAAAATGGAAAAATT+TGG | - | chr3_4:13557126-13557145 | None:intergenic | 20.0% |
| ! | AGAATGTTTGAGGATAATAA+GGG | - | chr3_4:13554972-13554991 | None:intergenic | 25.0% |
| ! | AAGAATGTTTGAGGATAATA+AGG | - | chr3_4:13554973-13554992 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAAGAATGTTTG+AGG | - | chr3_4:13554982-13555001 | None:intergenic | 25.0% |
| ! | AACATTTACTGTCCAAATTA+TGG | + | chr3_4:13555017-13555036 | Msa0491240:exon | 25.0% |
| ! | AAAATTACCATGAAATGAAG+AGG | - | chr3_4:13555112-13555131 | None:intergenic | 25.0% |
| !!! | ATATGATTATGTGGTTTGTT+TGG | + | chr3_4:13555371-13555390 | Msa0491240:intron | 25.0% |
| ! | GGTAATATGTAATGTCTATT+TGG | + | chr3_4:13555427-13555446 | Msa0491240:intron | 25.0% |
| !! | TTTTGTAATTTCAGTTACTG+TGG | + | chr3_4:13555577-13555596 | Msa0491240:intron | 25.0% |
| ! | CTAATCACTTAGAAACAAAA+TGG | - | chr3_4:13555701-13555720 | None:intergenic | 25.0% |
| !! | GTCTTCACAATTTCAAATTT+TGG | + | chr3_4:13555979-13555998 | Msa0491240:intron | 25.0% |
| !! | ATCGTAGAATTTGAAATGAT+GGG | + | chr3_4:13556005-13556024 | Msa0491240:intron | 25.0% |
| !! | AATTTTGTCTTCAACAAATG+TGG | - | chr3_4:13556670-13556689 | None:intergenic | 25.0% |
| !!! | TTTTTTGCCTAGTTTTTCAA+TGG | - | chr3_4:13556748-13556767 | None:intergenic | 25.0% |
| ! | ATAGGAGTTTACAAACAAAA+TGG | - | chr3_4:13557136-13557155 | None:intergenic | 25.0% |
| ! | AGAATGTTTGAGGATAATAA+GGG | - | chr3_4:13554972-13554991 | None:intergenic | 25.0% |
| ! | AAGAATGTTTGAGGATAATA+AGG | - | chr3_4:13554973-13554992 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAAGAATGTTTG+AGG | - | chr3_4:13554982-13555001 | None:intergenic | 25.0% |
| ! | AACATTTACTGTCCAAATTA+TGG | + | chr3_4:13555017-13555036 | Msa0491240:exon | 25.0% |
| ! | AAAATTACCATGAAATGAAG+AGG | - | chr3_4:13555112-13555131 | None:intergenic | 25.0% |
| !!! | ATATGATTATGTGGTTTGTT+TGG | + | chr3_4:13555371-13555390 | Msa0491240:intron | 25.0% |
| ! | GGTAATATGTAATGTCTATT+TGG | + | chr3_4:13555427-13555446 | Msa0491240:intron | 25.0% |
| !! | TTTTGTAATTTCAGTTACTG+TGG | + | chr3_4:13555577-13555596 | Msa0491240:intron | 25.0% |
| ! | CTAATCACTTAGAAACAAAA+TGG | - | chr3_4:13555701-13555720 | None:intergenic | 25.0% |
| !! | GTCTTCACAATTTCAAATTT+TGG | + | chr3_4:13555979-13555998 | Msa0491240:intron | 25.0% |
| !! | ATCGTAGAATTTGAAATGAT+GGG | + | chr3_4:13556005-13556024 | Msa0491240:intron | 25.0% |
| !! | AATTTTGTCTTCAACAAATG+TGG | - | chr3_4:13556670-13556689 | None:intergenic | 25.0% |
| !!! | TTTTTTGCCTAGTTTTTCAA+TGG | - | chr3_4:13556748-13556767 | None:intergenic | 25.0% |
| ! | ATAGGAGTTTACAAACAAAA+TGG | - | chr3_4:13557136-13557155 | None:intergenic | 25.0% |
| !! | GAGGATGTCACATTTTAATA+GGG | - | chr3_4:13554907-13554926 | None:intergenic | 30.0% |
| !! | AGAGGATGTCACATTTTAAT+AGG | - | chr3_4:13554908-13554927 | None:intergenic | 30.0% |
| AAGATAAAGATGAATGAGAG+AGG | - | chr3_4:13554926-13554945 | None:intergenic | 30.0% | |
| TATGAAACTGTGCCATAATT+TGG | - | chr3_4:13555032-13555051 | None:intergenic | 30.0% | |
| ! | TATGGCACAGTTTCATATTT+TGG | + | chr3_4:13555035-13555054 | Msa0491240:exon | 30.0% |
| ! | TTGACAGAATGTTGATTGAA+AGG | + | chr3_4:13555076-13555095 | Msa0491240:CDS | 30.0% |
| GATGTTCCAAGTTATTAACT+TGG | + | chr3_4:13555475-13555494 | Msa0491240:intron | 30.0% | |
| TGTGTTCCAAGTTAATAACT+TGG | - | chr3_4:13555484-13555503 | None:intergenic | 30.0% | |
| ! | ATTCATAGGCTATTTGAAAC+TGG | + | chr3_4:13555893-13555912 | Msa0491240:intron | 30.0% |
| !! | TATTTGAAACTGGTTTGTGT+TGG | + | chr3_4:13555903-13555922 | Msa0491240:intron | 30.0% |
| ! | CATCGTAGAATTTGAAATGA+TGG | + | chr3_4:13556004-13556023 | Msa0491240:intron | 30.0% |
| CATATAATCGAGATCATATG+CGG | + | chr3_4:13556196-13556215 | Msa0491240:intron | 30.0% | |
| ! | CGATTTTCATTATGACATCA+AGG | - | chr3_4:13556251-13556270 | None:intergenic | 30.0% |
| TGATGTCATAATGAAAATCG+AGG | + | chr3_4:13556251-13556270 | Msa0491240:intron | 30.0% | |
| TTCTCTTAAAGATATACCAG+TGG | + | chr3_4:13556417-13556436 | Msa0491240:CDS | 30.0% | |
| TTTCGAATTCAAAACTTTGG+AGG | + | chr3_4:13556518-13556537 | Msa0491240:intron | 30.0% | |
| TCTAAGCATCTGATTCAATA+AGG | - | chr3_4:13556586-13556605 | None:intergenic | 30.0% | |
| TTAACATCTGATTGTTGAAC+TGG | - | chr3_4:13556637-13556656 | None:intergenic | 30.0% | |
| ACCTAATCAACAACAAAAGA+AGG | + | chr3_4:13556704-13556723 | Msa0491240:CDS | 30.0% | |
| !!! | TCCTTCTTTTGTTGTTGATT+AGG | - | chr3_4:13556708-13556727 | None:intergenic | 30.0% |
| TGCAATTCCATTGAAAAACT+AGG | + | chr3_4:13556738-13556757 | Msa0491240:CDS | 30.0% | |
| ! | ATAGGTCATTGATTGATAGT+AGG | + | chr3_4:13556878-13556897 | Msa0491240:three_prime_UTR | 30.0% |
| ! | TTTTGTCTCATAAATGGTAC+TGG | + | chr3_4:13556930-13556949 | Msa0491240:three_prime_UTR | 30.0% |
| TGCATGAATTACATATTGGA+CGG | - | chr3_4:13557045-13557064 | None:intergenic | 30.0% | |
| TAATTCATGCATTAACTCCA+TGG | + | chr3_4:13557054-13557073 | Msa0491240:intron | 30.0% | |
| ! | GTCAAGAATTTTCATGTGAT+TGG | - | chr3_4:13557081-13557100 | None:intergenic | 30.0% |
| !! | GAGGATGTCACATTTTAATA+GGG | - | chr3_4:13554907-13554926 | None:intergenic | 30.0% |
| !! | AGAGGATGTCACATTTTAAT+AGG | - | chr3_4:13554908-13554927 | None:intergenic | 30.0% |
| AAGATAAAGATGAATGAGAG+AGG | - | chr3_4:13554926-13554945 | None:intergenic | 30.0% | |
| TATGAAACTGTGCCATAATT+TGG | - | chr3_4:13555032-13555051 | None:intergenic | 30.0% | |
| ! | TATGGCACAGTTTCATATTT+TGG | + | chr3_4:13555035-13555054 | Msa0491240:exon | 30.0% |
| ! | TTGACAGAATGTTGATTGAA+AGG | + | chr3_4:13555076-13555095 | Msa0491240:CDS | 30.0% |
| GATGTTCCAAGTTATTAACT+TGG | + | chr3_4:13555475-13555494 | Msa0491240:intron | 30.0% | |
| TGTGTTCCAAGTTAATAACT+TGG | - | chr3_4:13555484-13555503 | None:intergenic | 30.0% | |
| ! | ATTCATAGGCTATTTGAAAC+TGG | + | chr3_4:13555893-13555912 | Msa0491240:intron | 30.0% |
| !! | TATTTGAAACTGGTTTGTGT+TGG | + | chr3_4:13555903-13555922 | Msa0491240:intron | 30.0% |
| ! | CATCGTAGAATTTGAAATGA+TGG | + | chr3_4:13556004-13556023 | Msa0491240:intron | 30.0% |
| CATATAATCGAGATCATATG+CGG | + | chr3_4:13556196-13556215 | Msa0491240:intron | 30.0% | |
| ! | CGATTTTCATTATGACATCA+AGG | - | chr3_4:13556251-13556270 | None:intergenic | 30.0% |
| TGATGTCATAATGAAAATCG+AGG | + | chr3_4:13556251-13556270 | Msa0491240:intron | 30.0% | |
| TTCTCTTAAAGATATACCAG+TGG | + | chr3_4:13556417-13556436 | Msa0491240:CDS | 30.0% | |
| TTTCGAATTCAAAACTTTGG+AGG | + | chr3_4:13556518-13556537 | Msa0491240:intron | 30.0% | |
| TCTAAGCATCTGATTCAATA+AGG | - | chr3_4:13556586-13556605 | None:intergenic | 30.0% | |
| TTAACATCTGATTGTTGAAC+TGG | - | chr3_4:13556637-13556656 | None:intergenic | 30.0% | |
| ACCTAATCAACAACAAAAGA+AGG | + | chr3_4:13556704-13556723 | Msa0491240:CDS | 30.0% | |
| !!! | TCCTTCTTTTGTTGTTGATT+AGG | - | chr3_4:13556708-13556727 | None:intergenic | 30.0% |
| TGCAATTCCATTGAAAAACT+AGG | + | chr3_4:13556738-13556757 | Msa0491240:CDS | 30.0% | |
| ! | ATAGGTCATTGATTGATAGT+AGG | + | chr3_4:13556878-13556897 | Msa0491240:three_prime_UTR | 30.0% |
| ! | TTTTGTCTCATAAATGGTAC+TGG | + | chr3_4:13556930-13556949 | Msa0491240:three_prime_UTR | 30.0% |
| TGCATGAATTACATATTGGA+CGG | - | chr3_4:13557045-13557064 | None:intergenic | 30.0% | |
| TAATTCATGCATTAACTCCA+TGG | + | chr3_4:13557054-13557073 | Msa0491240:intron | 30.0% | |
| ! | GTCAAGAATTTTCATGTGAT+TGG | - | chr3_4:13557081-13557100 | None:intergenic | 30.0% |
| ATTCTGCAATGAAATCTGTC+AGG | + | chr3_4:13554817-13554836 | Msa0491240:five_prime_UTR | 35.0% | |
| !! | GATGTCACATTTTAATAGGG+TGG | - | chr3_4:13554904-13554923 | None:intergenic | 35.0% |
| GTTTGAGGATAATAAGGGAA+GGG | - | chr3_4:13554967-13554986 | None:intergenic | 35.0% | |
| TGTTTGAGGATAATAAGGGA+AGG | - | chr3_4:13554968-13554987 | None:intergenic | 35.0% | |
| CTCAAAACCTCTTCATTTCA+TGG | + | chr3_4:13555102-13555121 | Msa0491240:CDS | 35.0% | |
| AACTTGGAACACACTTCATT+CGG | + | chr3_4:13555491-13555510 | Msa0491240:intron | 35.0% | |
| !! | ACAAAGGCTTTGAAGTTTCT+TGG | + | chr3_4:13555611-13555630 | Msa0491240:CDS | 35.0% |
| ATAACTGATTACTGTATGCC+AGG | + | chr3_4:13555832-13555851 | Msa0491240:CDS | 35.0% | |
| TGATCTGCTGAGAAAAATCA+AGG | + | chr3_4:13555867-13555886 | Msa0491240:CDS | 35.0% | |
| ATGTTCCATCAAGGATTAAC+AGG | + | chr3_4:13556458-13556477 | Msa0491240:CDS | 35.0% | |
| TGAATCAGATGCTTAGAAGA+AGG | + | chr3_4:13556589-13556608 | Msa0491240:intron | 35.0% | |
| !! | TTCTCACTAATTTGTTGGTG+AGG | - | chr3_4:13556844-13556863 | None:intergenic | 35.0% |
| ! | AGCTCTTCTCACTAATTTGT+TGG | - | chr3_4:13556849-13556868 | None:intergenic | 35.0% |
| TATTGGACGGATAACTCTTT+GGG | - | chr3_4:13557032-13557051 | None:intergenic | 35.0% | |
| ATATTGGACGGATAACTCTT+TGG | - | chr3_4:13557033-13557052 | None:intergenic | 35.0% | |
| !! | ATTTTCATGTGATTGGTCCA+TGG | - | chr3_4:13557074-13557093 | None:intergenic | 35.0% |
| GGAAGAATCACATCATTTGT+TGG | - | chr3_4:13557105-13557124 | None:intergenic | 35.0% | |
| ATTCTGCAATGAAATCTGTC+AGG | + | chr3_4:13554817-13554836 | Msa0491240:five_prime_UTR | 35.0% | |
| !! | GATGTCACATTTTAATAGGG+TGG | - | chr3_4:13554904-13554923 | None:intergenic | 35.0% |
| GTTTGAGGATAATAAGGGAA+GGG | - | chr3_4:13554967-13554986 | None:intergenic | 35.0% | |
| TGTTTGAGGATAATAAGGGA+AGG | - | chr3_4:13554968-13554987 | None:intergenic | 35.0% | |
| CTCAAAACCTCTTCATTTCA+TGG | + | chr3_4:13555102-13555121 | Msa0491240:CDS | 35.0% | |
| AACTTGGAACACACTTCATT+CGG | + | chr3_4:13555491-13555510 | Msa0491240:intron | 35.0% | |
| !! | ACAAAGGCTTTGAAGTTTCT+TGG | + | chr3_4:13555611-13555630 | Msa0491240:CDS | 35.0% |
| ATAACTGATTACTGTATGCC+AGG | + | chr3_4:13555832-13555851 | Msa0491240:CDS | 35.0% | |
| TGATCTGCTGAGAAAAATCA+AGG | + | chr3_4:13555867-13555886 | Msa0491240:CDS | 35.0% | |
| ATGTTCCATCAAGGATTAAC+AGG | + | chr3_4:13556458-13556477 | Msa0491240:CDS | 35.0% | |
| TGAATCAGATGCTTAGAAGA+AGG | + | chr3_4:13556589-13556608 | Msa0491240:intron | 35.0% | |
| !! | TTCTCACTAATTTGTTGGTG+AGG | - | chr3_4:13556844-13556863 | None:intergenic | 35.0% |
| ! | AGCTCTTCTCACTAATTTGT+TGG | - | chr3_4:13556849-13556868 | None:intergenic | 35.0% |
| TATTGGACGGATAACTCTTT+GGG | - | chr3_4:13557032-13557051 | None:intergenic | 35.0% | |
| ATATTGGACGGATAACTCTT+TGG | - | chr3_4:13557033-13557052 | None:intergenic | 35.0% | |
| !! | ATTTTCATGTGATTGGTCCA+TGG | - | chr3_4:13557074-13557093 | None:intergenic | 35.0% |
| GGAAGAATCACATCATTTGT+TGG | - | chr3_4:13557105-13557124 | None:intergenic | 35.0% | |
| GATTTCATTGCAGAATCTGC+CGG | - | chr3_4:13554813-13554832 | None:intergenic | 40.0% | |
| TCCAAACTGTCAGATTTCCT+AGG | + | chr3_4:13554849-13554868 | Msa0491240:five_prime_UTR | 40.0% | |
| TCCTAGGAAATCTGACAGTT+TGG | - | chr3_4:13554853-13554872 | None:intergenic | 40.0% | |
| AAACTGTCAGATTTCCTAGG+AGG | + | chr3_4:13554852-13554871 | Msa0491240:five_prime_UTR | 40.0% | |
| AGGAGATACAAAATCCTCCT+AGG | - | chr3_4:13554869-13554888 | None:intergenic | 40.0% | |
| TAGGGTGGACATCATATTCA+AGG | - | chr3_4:13554889-13554908 | None:intergenic | 40.0% | |
| ! | ATCTACTCTGAGGATTTCCA+CGG | - | chr3_4:13555458-13555477 | None:intergenic | 40.0% |
| AACTTGGAACATCTACTCTG+AGG | - | chr3_4:13555468-13555487 | None:intergenic | 40.0% | |
| ! | TCAGTTACTGTGGTTGATTC+TGG | + | chr3_4:13555587-13555606 | Msa0491240:intron | 40.0% |
| ! | TGTGGTTGATTCTGGTACAA+AGG | + | chr3_4:13555595-13555614 | Msa0491240:CDS | 40.0% |
| !! | GGCTTTGAAGTTTCTTGGTT+TGG | + | chr3_4:13555616-13555635 | Msa0491240:CDS | 40.0% |
| GTTTGGTTGAAGATGATGTG+AGG | + | chr3_4:13555633-13555652 | Msa0491240:CDS | 40.0% | |
| GTTTCTGCAGCAATAGAATG+AGG | - | chr3_4:13555668-13555687 | None:intergenic | 40.0% | |
| TATTGCTGCAGAAACAGATC+AGG | + | chr3_4:13555673-13555692 | Msa0491240:CDS | 40.0% | |
| ! | TTTGTGGTTTGGAGAAATCG+CGG | - | chr3_4:13556115-13556134 | None:intergenic | 40.0% |
| GGTTACCTGTTAATCCTTGA+TGG | - | chr3_4:13556466-13556485 | None:intergenic | 40.0% | |
| !! | AGAAGAGCTTGCTGATGAAT+AGG | + | chr3_4:13556860-13556879 | Msa0491240:three_prime_UTR | 40.0% |
| GATTTCATTGCAGAATCTGC+CGG | - | chr3_4:13554813-13554832 | None:intergenic | 40.0% | |
| TCCAAACTGTCAGATTTCCT+AGG | + | chr3_4:13554849-13554868 | Msa0491240:five_prime_UTR | 40.0% | |
| TCCTAGGAAATCTGACAGTT+TGG | - | chr3_4:13554853-13554872 | None:intergenic | 40.0% | |
| AAACTGTCAGATTTCCTAGG+AGG | + | chr3_4:13554852-13554871 | Msa0491240:five_prime_UTR | 40.0% | |
| AGGAGATACAAAATCCTCCT+AGG | - | chr3_4:13554869-13554888 | None:intergenic | 40.0% | |
| TAGGGTGGACATCATATTCA+AGG | - | chr3_4:13554889-13554908 | None:intergenic | 40.0% | |
| ! | ATCTACTCTGAGGATTTCCA+CGG | - | chr3_4:13555458-13555477 | None:intergenic | 40.0% |
| AACTTGGAACATCTACTCTG+AGG | - | chr3_4:13555468-13555487 | None:intergenic | 40.0% | |
| ! | TCAGTTACTGTGGTTGATTC+TGG | + | chr3_4:13555587-13555606 | Msa0491240:intron | 40.0% |
| ! | TGTGGTTGATTCTGGTACAA+AGG | + | chr3_4:13555595-13555614 | Msa0491240:CDS | 40.0% |
| !! | GGCTTTGAAGTTTCTTGGTT+TGG | + | chr3_4:13555616-13555635 | Msa0491240:CDS | 40.0% |
| GTTTGGTTGAAGATGATGTG+AGG | + | chr3_4:13555633-13555652 | Msa0491240:CDS | 40.0% | |
| GTTTCTGCAGCAATAGAATG+AGG | - | chr3_4:13555668-13555687 | None:intergenic | 40.0% | |
| TATTGCTGCAGAAACAGATC+AGG | + | chr3_4:13555673-13555692 | Msa0491240:CDS | 40.0% | |
| ! | TTTGTGGTTTGGAGAAATCG+CGG | - | chr3_4:13556115-13556134 | None:intergenic | 40.0% |
| GGTTACCTGTTAATCCTTGA+TGG | - | chr3_4:13556466-13556485 | None:intergenic | 40.0% | |
| !! | AGAAGAGCTTGCTGATGAAT+AGG | + | chr3_4:13556860-13556879 | Msa0491240:three_prime_UTR | 40.0% |
| TGGAACACACTTCATTCGGA+TGG | + | chr3_4:13555495-13555514 | Msa0491240:intron | 45.0% | |
| TTCGGATGGATCAATCACTG+CGG | + | chr3_4:13555509-13555528 | Msa0491240:intron | 45.0% | |
| TACTGTATGCCAGGAATGAC+TGG | + | chr3_4:13555841-13555860 | Msa0491240:CDS | 45.0% | |
| AGATCATAGCCAGTCATTCC+TGG | - | chr3_4:13555853-13555872 | None:intergenic | 45.0% | |
| TCTGAGGACATAATCACCAC+TGG | - | chr3_4:13556436-13556455 | None:intergenic | 45.0% | |
| CCTTGATGGAACATTCTCTG+AGG | - | chr3_4:13556452-13556471 | None:intergenic | 45.0% | |
| CCTCAGAGAATGTTCCATCA+AGG | + | chr3_4:13556449-13556468 | Msa0491240:CDS | 45.0% | |
| TGGAACACACTTCATTCGGA+TGG | + | chr3_4:13555495-13555514 | Msa0491240:intron | 45.0% | |
| TTCGGATGGATCAATCACTG+CGG | + | chr3_4:13555509-13555528 | Msa0491240:intron | 45.0% | |
| TACTGTATGCCAGGAATGAC+TGG | + | chr3_4:13555841-13555860 | Msa0491240:CDS | 45.0% | |
| AGATCATAGCCAGTCATTCC+TGG | - | chr3_4:13555853-13555872 | None:intergenic | 45.0% | |
| TCTGAGGACATAATCACCAC+TGG | - | chr3_4:13556436-13556455 | None:intergenic | 45.0% | |
| CCTTGATGGAACATTCTCTG+AGG | - | chr3_4:13556452-13556471 | None:intergenic | 45.0% | |
| CCTCAGAGAATGTTCCATCA+AGG | + | chr3_4:13556449-13556468 | Msa0491240:CDS | 45.0% | |
| !! | AAAAAATAAATTAAAATTGT+AGG | + | chr3_4:13556151-13556170 | Msa0491240:intron | 5.0% |
| !! | AAAAAATAAATTAAAATTGT+AGG | + | chr3_4:13556151-13556170 | Msa0491240:intron | 5.0% |
| ! | ATGTCTATTTGGAACCGCCG+TGG | + | chr3_4:13555438-13555457 | Msa0491240:intron | 50.0% |
| ! | TACTCTGAGGATTTCCACGG+CGG | - | chr3_4:13555455-13555474 | None:intergenic | 50.0% |
| ! | ATGTCTATTTGGAACCGCCG+TGG | + | chr3_4:13555438-13555457 | Msa0491240:intron | 50.0% |
| ! | TACTCTGAGGATTTCCACGG+CGG | - | chr3_4:13555455-13555474 | None:intergenic | 50.0% |
| GGACGGATAACTCTTTGGGC+TGG | - | chr3_4:13557028-13557047 | None:intergenic | 55.0% | |
| GGACGGATAACTCTTTGGGC+TGG | - | chr3_4:13557028-13557047 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 13554804 | 13557162 | 13554804 | ID=Msa0491240;Name=Msa0491240 |
| chr3_4 | mRNA | 13554804 | 13557162 | 13554804 | ID=Msa0491240-mRNA-1;Parent=Msa0491240;Name=Msa0491240-mRNA-1;_AED=0.14;_eAED=0.14;_QI=232|1|1|1|0.8|0.66|6|374|167 |
| chr3_4 | exon | 13554804 | 13555123 | 13554804 | ID=Msa0491240-mRNA-1:exon:4087;Parent=Msa0491240-mRNA-1 |
| chr3_4 | exon | 13555591 | 13555694 | 13555591 | ID=Msa0491240-mRNA-1:exon:4088;Parent=Msa0491240-mRNA-1 |
| chr3_4 | exon | 13555811 | 13555888 | 13555811 | ID=Msa0491240-mRNA-1:exon:4089;Parent=Msa0491240-mRNA-1 |
| chr3_4 | exon | 13556409 | 13556479 | 13556409 | ID=Msa0491240-mRNA-1:exon:4090;Parent=Msa0491240-mRNA-1 |
| chr3_4 | exon | 13556597 | 13557045 | 13556597 | ID=Msa0491240-mRNA-1:exon:4091;Parent=Msa0491240-mRNA-1 |
| chr3_4 | exon | 13557075 | 13557162 | 13557075 | ID=Msa0491240-mRNA-1:exon:4092;Parent=Msa0491240-mRNA-1 |
| chr3_4 | five_prime_UTR | 13554804 | 13555035 | 13554804 | ID=Msa0491240-mRNA-1:five_prime_utr;Parent=Msa0491240-mRNA-1 |
| chr3_4 | CDS | 13555036 | 13555123 | 13555036 | ID=Msa0491240-mRNA-1:cds;Parent=Msa0491240-mRNA-1 |
| chr3_4 | CDS | 13555591 | 13555694 | 13555591 | ID=Msa0491240-mRNA-1:cds;Parent=Msa0491240-mRNA-1 |
| chr3_4 | CDS | 13555811 | 13555888 | 13555811 | ID=Msa0491240-mRNA-1:cds;Parent=Msa0491240-mRNA-1 |
| chr3_4 | CDS | 13556409 | 13556479 | 13556409 | ID=Msa0491240-mRNA-1:cds;Parent=Msa0491240-mRNA-1 |
| chr3_4 | CDS | 13556597 | 13556759 | 13556597 | ID=Msa0491240-mRNA-1:cds;Parent=Msa0491240-mRNA-1 |
| chr3_4 | three_prime_UTR | 13556760 | 13557045 | 13556760 | ID=Msa0491240-mRNA-1:three_prime_utr;Parent=Msa0491240-mRNA-1 |
| chr3_4 | three_prime_UTR | 13557075 | 13557162 | 13557075 | ID=Msa0491240-mRNA-1:three_prime_utr;Parent=Msa0491240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
