Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0492640 | XP_003598875.2 | 98.179 | 659 | 12 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0492640 | sp|Q5W9E7|MUS81_ARATH | 58.482 | 672 | 251 | 8 | 1 | 658 | 1 | 658 | 0.0 | 762 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0492640 | G7J1L2 | 98.179 | 659 | 12 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1350 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0090400 | Msa0492640 | 0.809965 | 1.458044e-50 | -8.615850e-47 |
Msa0137880 | Msa0492640 | 0.803669 | 3.121301e-49 | -8.615850e-47 |
Msa0492640 | Msa0835490 | 0.808888 | 2.482526e-50 | -8.615850e-47 |
Msa0492640 | Msa1321340 | 0.816319 | 5.879341e-52 | -8.615850e-47 |
Msa0492640 | Msa1333080 | 0.801363 | 9.327504e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0492640 | MtrunA17_Chr3g0085691 | 98.179 | 659 | 12 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1350 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0492640 | AT4G30870.1 | 58.482 | 672 | 251 | 8 | 1 | 658 | 1 | 658 | 0.0 | 762 |
Msa0492640 | AT5G39770.1 | 57.705 | 305 | 80 | 4 | 361 | 656 | 991 | 1255 | 7.24e-95 | 318 |
Msa0492640 | AT5G39770.1 | 59.239 | 184 | 70 | 4 | 30 | 210 | 762 | 943 | 4.07e-55 | 204 |
Find 171 sgRNAs with CRISPR-Local
Find 670 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTATTGATAACCCTTTAT+AGG | 0.165816 | 3_4:+16499856 | Msa0492640:CDS |
TTCATCAATATTTGAGATTC+TGG | 0.171408 | 3_4:-16502155 | None:intergenic |
TCAGCAGCTTCAGAAGAATT+TGG | 0.210302 | 3_4:-16506233 | None:intergenic |
ACATACACATTACAATAAAA+AGG | 0.215294 | 3_4:-16507916 | None:intergenic |
AGAGATGAGACATCTTTATT+TGG | 0.227179 | 3_4:-16502080 | None:intergenic |
ATGATTTACGCAGTTCAATT+AGG | 0.236348 | 3_4:+16505483 | Msa0492640:CDS |
TTGTCATATCATATTATATT+TGG | 0.237279 | 3_4:+16508073 | Msa0492640:three_prime_UTR |
GGTAGGGTTCGGAATTTGTT+AGG | 0.264141 | 3_4:-16498116 | None:intergenic |
GTCTTTGAAGCATCTGCTCT+TGG | 0.289286 | 3_4:-16507739 | None:intergenic |
GCAGTTATATATACCTATAA+AGG | 0.294684 | 3_4:-16499869 | None:intergenic |
ACCAGATGACTTGACCAAAA+AGG | 0.299043 | 3_4:+16499670 | Msa0492640:CDS |
GTGTGCCACCATTGAGCTTT+GGG | 0.300848 | 3_4:+16504120 | Msa0492640:CDS |
ATCTTTATTTGGATGGCTTC+TGG | 0.307732 | 3_4:-16502069 | None:intergenic |
TGTTGAAATTTCTGTTCATA+TGG | 0.309046 | 3_4:+16501166 | Msa0492640:CDS |
GAACATCCAGTGGCTTCTTT+TGG | 0.311950 | 3_4:-16501262 | None:intergenic |
TTCTCCATTCCGGTAGGGTT+CGG | 0.330578 | 3_4:-16498127 | None:intergenic |
AATGCTAATACTGTTGTAAA+TGG | 0.333112 | 3_4:+16502176 | Msa0492640:CDS |
GACAATGACATTCTAACATT+TGG | 0.339807 | 3_4:-16508055 | None:intergenic |
GGAATTGTTTGGAAGGGGTG+TGG | 0.342550 | 3_4:+16499589 | Msa0492640:intron |
TGCTGCTTCCTTACCTTCTT+CGG | 0.342966 | 3_4:-16501090 | None:intergenic |
TTTAATAGGGGAACTTCAAA+TGG | 0.343754 | 3_4:+16500005 | Msa0492640:intron |
TGCCTGTTGGAGATGGGATT+TGG | 0.349382 | 3_4:+16505393 | Msa0492640:CDS |
TGATTTACGCAGTTCAATTA+GGG | 0.355381 | 3_4:+16505484 | Msa0492640:CDS |
AGAAGTCAGTGCATATGATT+TGG | 0.355501 | 3_4:+16501211 | Msa0492640:CDS |
CACCATTGAGCTTTGGGGAG+AGG | 0.355793 | 3_4:+16504126 | Msa0492640:CDS |
AATAGAAAACCATACTTTGC+TGG | 0.360478 | 3_4:-16500319 | None:intergenic |
AATCATGCCGCGCTGGGTTT+CGG | 0.367414 | 3_4:-16498037 | None:intergenic |
ATCTGGAATGGCAGAATCTC+TGG | 0.368314 | 3_4:+16501130 | Msa0492640:CDS |
CGGCGTCTGCCTGTTGGAGA+TGG | 0.372182 | 3_4:+16505386 | Msa0492640:CDS |
ATGGCAAAAGGTGGAATATC+AGG | 0.376170 | 3_4:-16502363 | None:intergenic |
TGTAATATTGATAAATTGCT+TGG | 0.376472 | 3_4:-16506919 | None:intergenic |
AAAGGAAAAGCTGGACATTT+CGG | 0.379528 | 3_4:+16500214 | Msa0492640:CDS |
TAAGATGACCATACTTCCTT+AGG | 0.380063 | 3_4:-16506895 | None:intergenic |
AGTGTGCCACCATTGAGCTT+TGG | 0.384924 | 3_4:+16504119 | Msa0492640:CDS |
CGTATGATGAATTTGTTAGA+AGG | 0.390644 | 3_4:+16506990 | Msa0492640:CDS |
TTCACCTTTACTTGGTGGAT+TGG | 0.392534 | 3_4:-16507862 | None:intergenic |
AGTATGAACAATACTTTGAT+TGG | 0.400260 | 3_4:-16508011 | None:intergenic |
AATCTTTGATAGTTCGAATT+GGG | 0.404159 | 3_4:-16498300 | None:intergenic |
AAATCTTTGATAGTTCGAAT+TGG | 0.407335 | 3_4:-16498301 | None:intergenic |
GAATTGTTTGGAAGGGGTGT+GGG | 0.409264 | 3_4:+16499590 | Msa0492640:intron |
CTTAGAGAGGAGCAAGTCTA+TGG | 0.410422 | 3_4:+16502125 | Msa0492640:CDS |
AAATGGTATTCACCTTTACT+TGG | 0.422469 | 3_4:-16507870 | None:intergenic |
TGTGACTGTCTTAAAAGATC+TGG | 0.423183 | 3_4:+16501113 | Msa0492640:CDS |
TCGGACGCGGGTTCGTTGTC+CGG | 0.426124 | 3_4:+16498150 | Msa0492640:CDS |
CCTCCTGTAGTTTACAAACA+TGG | 0.430038 | 3_4:+16502004 | Msa0492640:intron |
TACTTTGATTGGTGATGTAC+AGG | 0.432777 | 3_4:-16508000 | None:intergenic |
TCTTTGAAGCATCTGCTCTT+GGG | 0.433399 | 3_4:-16507738 | None:intergenic |
GTTCGGAATTTGTTAGGGTT+GGG | 0.435210 | 3_4:-16498110 | None:intergenic |
GGTTCGGAATTTGTTAGGGT+TGG | 0.436747 | 3_4:-16498111 | None:intergenic |
TCTTTCCGAAAACGTTGAAA+TGG | 0.442843 | 3_4:+16498237 | Msa0492640:CDS |
GAATGAATTTATGCGTAAAC+AGG | 0.445209 | 3_4:+16500028 | Msa0492640:CDS |
TCGGGAGCAATTTGCTACTA+AGG | 0.448704 | 3_4:+16504187 | Msa0492640:CDS |
CAAAGTAATAATGTGATCAA+TGG | 0.450341 | 3_4:+16507761 | Msa0492640:CDS |
GTAATATTGATAAATTGCTT+GGG | 0.451825 | 3_4:-16506918 | None:intergenic |
TTTGGTCAAGTCATCTGGTT+CGG | 0.451994 | 3_4:-16499666 | None:intergenic |
GAAGAACAAGTGGAAAGAAA+TGG | 0.453094 | 3_4:+16498198 | Msa0492640:CDS |
GGCGTCTGCCTGTTGGAGAT+GGG | 0.461106 | 3_4:+16505387 | Msa0492640:CDS |
GTCGCTAGTTCTTCGTTCTC+CGG | 0.463858 | 3_4:-16498169 | None:intergenic |
AGCACTAATAATCTGCTCCT+TGG | 0.465637 | 3_4:-16502033 | None:intergenic |
CCGCGTCCGATTCTCCATTC+CGG | 0.468790 | 3_4:-16498137 | None:intergenic |
CGGGAGCAATTTGCTACTAA+GGG | 0.471276 | 3_4:+16504188 | Msa0492640:CDS |
GTAGGGTTCGGAATTTGTTA+GGG | 0.472542 | 3_4:-16498115 | None:intergenic |
ATCCAAATCCCATCTCCAAC+AGG | 0.472915 | 3_4:-16505395 | None:intergenic |
ATGAGACATCTTTATTTGGA+TGG | 0.477395 | 3_4:-16502076 | None:intergenic |
TCCTCTTGATTCCCTTGAGA+GGG | 0.479623 | 3_4:+16501283 | Msa0492640:CDS |
CTATGTCGAACATACGCAAT+TGG | 0.482328 | 3_4:-16500092 | None:intergenic |
CTCATAAATGCAGGTCCCAC+AGG | 0.486646 | 3_4:+16507339 | Msa0492640:intron |
TGGTATTCACCTTTACTTGG+TGG | 0.488408 | 3_4:-16507867 | None:intergenic |
CAGTTATATATACCTATAAA+GGG | 0.491273 | 3_4:-16499868 | None:intergenic |
TCGGAAGTTCTCCACAGGAT+TGG | 0.492672 | 3_4:+16500233 | Msa0492640:CDS |
GGTGACACCCTAAGGAAGTA+TGG | 0.493006 | 3_4:+16506887 | Msa0492640:CDS |
AGAACCCTGAGTTCATCCTT+TGG | 0.493314 | 3_4:+16502315 | Msa0492640:CDS |
TAGAAGAAATCATGCCGCGC+TGG | 0.494947 | 3_4:-16498044 | None:intergenic |
GTTGTTTCAGATCACGATCT+AGG | 0.502673 | 3_4:+16504709 | Msa0492640:intron |
AAGTATTGTTCATACTGAGC+AGG | 0.503566 | 3_4:+16508018 | Msa0492640:three_prime_UTR |
CTCCTGTAGTTTACAAACAT+GGG | 0.503996 | 3_4:+16502005 | Msa0492640:intron |
ATGAAGACATTGATATCTAA+AGG | 0.506821 | 3_4:+16500274 | Msa0492640:CDS |
ATCAGCTACCCCAAACAAGC+TGG | 0.507498 | 3_4:-16507805 | None:intergenic |
AGCTGATGAGCAAGCTCTCA+TGG | 0.509225 | 3_4:-16502382 | None:intergenic |
AACCTCTCCCCAAAGCTCAA+TGG | 0.509918 | 3_4:-16504128 | None:intergenic |
TTGTTCATACTGAGCAGGAT+TGG | 0.509931 | 3_4:+16508023 | Msa0492640:three_prime_UTR |
TACGCCACAGAGTTCCTTTG+AGG | 0.510406 | 3_4:-16499831 | None:intergenic |
CATGCTAACCGAAGAAGGTA+AGG | 0.510847 | 3_4:+16501082 | Msa0492640:CDS |
AATGATGTTGAGGCTAATGC+AGG | 0.514194 | 3_4:+16499616 | Msa0492640:CDS |
TATGCCAATCCACCAAGTAA+AGG | 0.516333 | 3_4:+16507858 | Msa0492640:three_prime_UTR |
GAGCAAGCTCTCATGGCAAA+AGG | 0.516860 | 3_4:-16502375 | None:intergenic |
CACAGGATTGGTACAGTGGA+TGG | 0.519879 | 3_4:+16500245 | Msa0492640:CDS |
CTTATAGGAAAGAAAACTAA+AGG | 0.520233 | 3_4:+16499792 | Msa0492640:intron |
GTACAGAGAACAAGTGGCTT+AGG | 0.520892 | 3_4:+16506866 | Msa0492640:CDS |
ATCGCGCGCCATAAAACTCT+TGG | 0.522186 | 3_4:+16505416 | Msa0492640:CDS |
ACCCTACCGGAATGGAGAAT+CGG | 0.526022 | 3_4:+16498131 | Msa0492640:exon |
CCTTTGAGGCATATAGCGCT+TGG | 0.526123 | 3_4:-16499817 | None:intergenic |
GTCCGATTCTCCATTCCGGT+AGG | 0.528871 | 3_4:-16498133 | None:intergenic |
TTAATAGGGGAACTTCAAAT+GGG | 0.529396 | 3_4:+16500006 | Msa0492640:intron |
TTCCTCTTGATTCCCTTGAG+AGG | 0.530687 | 3_4:+16501282 | Msa0492640:CDS |
CAACTTCAAAATCCAAATAG+AGG | 0.531853 | 3_4:+16504755 | Msa0492640:CDS |
ATTTGCCATCCAACTTATGC+AGG | 0.532461 | 3_4:+16507048 | Msa0492640:CDS |
ATAGAAAACCATACTTTGCT+GGG | 0.534372 | 3_4:-16500318 | None:intergenic |
TAGTTAGTACCTGCATAAGT+TGG | 0.535435 | 3_4:-16507057 | None:intergenic |
AATTGTTTGGAAGGGGTGTG+GGG | 0.535460 | 3_4:+16499591 | Msa0492640:intron |
TGATCAATGGATCTGCTAGT+AGG | 0.536393 | 3_4:+16507774 | Msa0492640:CDS |
TAGGTTCGGCGTCTGCCTGT+TGG | 0.537322 | 3_4:+16505380 | Msa0492640:intron |
GGAGATTGCCATGGCTGTGT+TGG | 0.539163 | 3_4:+16507369 | Msa0492640:CDS |
CCCTGAGTTCATCCTTTGGT+GGG | 0.539219 | 3_4:+16502319 | Msa0492640:CDS |
AAGATGACCATACTTCCTTA+GGG | 0.545216 | 3_4:-16506894 | None:intergenic |
ATCGATGCTGCTGAAGCCAG+TGG | 0.546295 | 3_4:+16500056 | Msa0492640:CDS |
AGAAGAAATCATGCCGCGCT+GGG | 0.547043 | 3_4:-16498043 | None:intergenic |
ACCCTGAGTTCATCCTTTGG+TGG | 0.547411 | 3_4:+16502318 | Msa0492640:CDS |
GAGAGATCAATTGTGTGAAG+TGG | 0.552250 | 3_4:-16498076 | None:intergenic |
CCAGATCCCAAAGGCCCCGT+TGG | 0.553317 | 3_4:+16502282 | Msa0492640:intron |
ACATTTCGGAAGTTCTCCAC+AGG | 0.553565 | 3_4:+16500228 | Msa0492640:CDS |
TCCGATTCTCCATTCCGGTA+GGG | 0.556619 | 3_4:-16498132 | None:intergenic |
AGATGTCTCATCTCTGTGGC+CGG | 0.558726 | 3_4:+16502088 | Msa0492640:CDS |
ACGGGCAAGCGACACAAGTG+TGG | 0.559274 | 3_4:-16507401 | None:intergenic |
CCAAGCGCTATATGCCTCAA+AGG | 0.560321 | 3_4:+16499817 | Msa0492640:CDS |
CGACGTTCATGAAGAACAAG+TGG | 0.564270 | 3_4:+16498188 | Msa0492640:CDS |
AGAGGAAGCATACCCTCTCA+AGG | 0.567249 | 3_4:-16501295 | None:intergenic |
AATTCCGAACCCTACCGGAA+TGG | 0.567417 | 3_4:+16498123 | Msa0492640:exon |
AGGTACATGCTAACCGAAGA+AGG | 0.567515 | 3_4:+16501077 | Msa0492640:intron |
TGTGCCACCATTGAGCTTTG+GGG | 0.569749 | 3_4:+16504121 | Msa0492640:CDS |
TATGGACATTGTAGAGATGT+GGG | 0.570289 | 3_4:+16506177 | Msa0492640:intron |
CTAAGTTGACATAAAACAGC+CGG | 0.570986 | 3_4:-16502107 | None:intergenic |
TAACAAATTCCGAACCCTAC+CGG | 0.573132 | 3_4:+16498118 | Msa0492640:five_prime_UTR |
GGCAGAATCTCTGGACAAGT+CGG | 0.576309 | 3_4:+16501139 | Msa0492640:CDS |
TCACAAGCAGTGAGTAGGCA+CGG | 0.580284 | 3_4:-16507420 | None:intergenic |
GTGGCTTAGGTGACACCCTA+AGG | 0.582689 | 3_4:+16506879 | Msa0492640:CDS |
CTGTCTTAAAAGATCTGGAA+TGG | 0.582880 | 3_4:+16501118 | Msa0492640:CDS |
ATATGGACATTGTAGAGATG+TGG | 0.583024 | 3_4:+16506176 | Msa0492640:intron |
TCCCACCAAAGGATGAACTC+AGG | 0.583063 | 3_4:-16502320 | None:intergenic |
CAATCTCCTCTGTAACCTGT+GGG | 0.586079 | 3_4:-16507354 | None:intergenic |
AATTAGGGATAACCGCTACA+AGG | 0.587075 | 3_4:+16505499 | Msa0492640:CDS |
TCTTGGCAGTGAATATGTGT+TGG | 0.587118 | 3_4:+16505433 | Msa0492640:CDS |
TAGTACCTGCATAAGTTGGA+TGG | 0.588005 | 3_4:-16507053 | None:intergenic |
GAATCGCCAAAAGAAGCCAC+TGG | 0.590285 | 3_4:+16501256 | Msa0492640:CDS |
CAAGCTCTCATGGCAAAAGG+TGG | 0.592032 | 3_4:-16502372 | None:intergenic |
TTCATCCTTTGGTGGGAATG+TGG | 0.592833 | 3_4:+16502326 | Msa0492640:CDS |
GGATCAGAAGTTAAGACTTG+TGG | 0.593863 | 3_4:+16505520 | Msa0492640:CDS |
TACAAACATGGGCTACTCCA+AGG | 0.597185 | 3_4:+16502016 | Msa0492640:CDS |
GCAATCTCCTCTGTAACCTG+TGG | 0.597423 | 3_4:-16507355 | None:intergenic |
TTAACTTCTGATCCTTGTAG+CGG | 0.598291 | 3_4:-16505511 | None:intergenic |
CACAAGCAGTGAGTAGGCAC+GGG | 0.613604 | 3_4:-16507419 | None:intergenic |
CCGGAATGGAGAATCGGACG+CGG | 0.613965 | 3_4:+16498137 | Msa0492640:exon |
CCCACCAAAGGATGAACTCA+GGG | 0.614813 | 3_4:-16502319 | None:intergenic |
CACAATACAAAAGCTAAACA+AGG | 0.618921 | 3_4:+16504067 | Msa0492640:CDS |
TCTCCACAGGATTGGTACAG+TGG | 0.620689 | 3_4:+16500241 | Msa0492640:CDS |
AGGACTCACAAGCAGTGAGT+AGG | 0.622917 | 3_4:-16507425 | None:intergenic |
TTTACAACAGAGATTCTGGA+GGG | 0.623241 | 3_4:+16506836 | Msa0492640:CDS |
GAGGAAGCATACCCTCTCAA+GGG | 0.627808 | 3_4:-16501294 | None:intergenic |
CGGGCAAGCGACACAAGTGT+GGG | 0.631875 | 3_4:-16507400 | None:intergenic |
CTCTCCCCAAAGCTCAATGG+TGG | 0.633873 | 3_4:-16504125 | None:intergenic |
ATACAAATCCAACACAGCCA+TGG | 0.636513 | 3_4:-16507377 | None:intergenic |
TTTGACGTACAGAGAACAAG+TGG | 0.637534 | 3_4:+16506860 | Msa0492640:CDS |
GTGTGGGGAAAATGATGTTG+AGG | 0.639402 | 3_4:+16499606 | Msa0492640:CDS |
GCAGGTCCCACAGGTTACAG+AGG | 0.641469 | 3_4:+16507348 | Msa0492640:intron |
TCGATGCTGCTGAAGCCAGT+GGG | 0.644497 | 3_4:+16500057 | Msa0492640:CDS |
CATCCACTGTACCAATCCTG+TGG | 0.645014 | 3_4:-16500244 | None:intergenic |
GTTCGCCACATTCCCACCAA+AGG | 0.645178 | 3_4:-16502331 | None:intergenic |
AAGCTGATATATCTTGTCGA+AGG | 0.646419 | 3_4:+16506206 | Msa0492640:CDS |
CGGAATGGAGAATCGGACGC+GGG | 0.646568 | 3_4:+16498138 | Msa0492640:exon |
TGGTGCTCGAGATAACCCAC+TGG | 0.656418 | 3_4:-16500072 | None:intergenic |
GAATCAAGAGGAACATCCAG+TGG | 0.660392 | 3_4:-16501272 | None:intergenic |
GGGAGCAATTTGCTACTAAG+GGG | 0.660821 | 3_4:+16504189 | Msa0492640:CDS |
GAAATGGCTGAGTCACCGAA+AGG | 0.664753 | 3_4:+16498214 | Msa0492640:CDS |
TTACAACAGAGATTCTGGAG+GGG | 0.664867 | 3_4:+16506837 | Msa0492640:CDS |
ATGATGTTGAGGCTAATGCA+GGG | 0.667979 | 3_4:+16499617 | Msa0492640:CDS |
GGTTACAGAGGAGATTGCCA+TGG | 0.669308 | 3_4:+16507360 | Msa0492640:CDS |
ACCCTCTCAAGGGAATCAAG+AGG | 0.681201 | 3_4:-16501284 | None:intergenic |
CTAACAAATTCATCATACGA+AGG | 0.685792 | 3_4:-16506986 | None:intergenic |
CATATATGACCAGATCCCAA+AGG | 0.685975 | 3_4:+16502273 | Msa0492640:intron |
ATAAAGATGTCTCATCTCTG+TGG | 0.690729 | 3_4:+16502084 | Msa0492640:CDS |
TATGCCTCAAAGGAACTCTG+TGG | 0.734807 | 3_4:+16499827 | Msa0492640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAATAATTAAACATAAATT+TGG | - | chr3_4:16499760-16499779 | None:intergenic | 10.0% |
!!! | ATAAAAACATTTTAATTACA+TGG | - | chr3_4:16501975-16501994 | None:intergenic | 10.0% |
!!! | GATTTTGAAAATTATTAAAA+TGG | + | chr3_4:16502502-16502521 | Msa0492640:intron | 10.0% |
!! | TTAAACCATAAAATAATTAA+AGG | + | chr3_4:16503707-16503726 | Msa0492640:intron | 10.0% |
!!! | ATTTACCTTTAATTATTTTA+TGG | - | chr3_4:16503715-16503734 | None:intergenic | 10.0% |
!!! | TTATGAAGTAATTTTAATAT+TGG | + | chr3_4:16504160-16504179 | Msa0492640:CDS | 10.0% |
!! | CAAGAAATTTATTTATATAT+AGG | + | chr3_4:16505361-16505380 | Msa0492640:intron | 10.0% |
!! | AATTTATTTATATATAGGTT+CGG | + | chr3_4:16505366-16505385 | Msa0492640:intron | 10.0% |
!!! | AATGTAATGATTTTTTTTTA+AGG | - | chr3_4:16506753-16506772 | None:intergenic | 10.0% |
!! | AAAATCATTTATAAACATAT+AGG | - | chr3_4:16507299-16507318 | None:intergenic | 10.0% |
!!! | ATTTTACAACTACATTTTTT+CGG | - | chr3_4:16498699-16498718 | None:intergenic | 15.0% |
!!! | ATTTTATAACTACATTAGTT+TGG | - | chr3_4:16498912-16498931 | None:intergenic | 15.0% |
!! | AAACTAATGTAGTTATAAAA+TGG | + | chr3_4:16498911-16498930 | Msa0492640:intron | 15.0% |
!! | AATGTAGTTATAAATTGTAA+TGG | + | chr3_4:16499117-16499136 | Msa0492640:intron | 15.0% |
!! | TTTCTCAATTTAAAAGAAAA+TGG | - | chr3_4:16499210-16499229 | None:intergenic | 15.0% |
!! | ATAAATTTGGACAAAATAAA+TGG | - | chr3_4:16499747-16499766 | None:intergenic | 15.0% |
!!! | CTGATAAATATGTTTTTATT+TGG | + | chr3_4:16499915-16499934 | Msa0492640:intron | 15.0% |
!!! | ATAAATATGTTTTTATTTGG+TGG | + | chr3_4:16499918-16499937 | Msa0492640:intron | 15.0% |
!!! | TAAATATGTTTTTATTTGGT+GGG | + | chr3_4:16499919-16499938 | Msa0492640:intron | 15.0% |
!!! | TTTTAAATGAAATGTAGAAT+TGG | + | chr3_4:16501001-16501020 | Msa0492640:intron | 15.0% |
!! | AAGTTACATTGTTTATTAAT+TGG | - | chr3_4:16501725-16501744 | None:intergenic | 15.0% |
!! | TTAAATTAAGATAAAGACAA+AGG | - | chr3_4:16503970-16503989 | None:intergenic | 15.0% |
!!! | TAATTTTAATATTGGATGAT+CGG | + | chr3_4:16504168-16504187 | Msa0492640:CDS | 15.0% |
!!! | AAATAAATTTTCTCTCTTAA+AGG | - | chr3_4:16504442-16504461 | None:intergenic | 15.0% |
!! | AATAGAAATATTAAGTTCAT+TGG | - | chr3_4:16504685-16504704 | None:intergenic | 15.0% |
!! | AAAATTATAATTAATCTGTG+TGG | + | chr3_4:16504880-16504899 | Msa0492640:intron | 15.0% |
!!! | TATACAAATGATATTTTCAA+AGG | - | chr3_4:16504991-16505010 | None:intergenic | 15.0% |
!! | GAAAAAAAATTCTTAAATTG+TGG | - | chr3_4:16505053-16505072 | None:intergenic | 15.0% |
!!! | TTTTATTAATGTTACAAACT+TGG | + | chr3_4:16505268-16505287 | Msa0492640:intron | 15.0% |
!!! | AAATTTAAGGTTATTTATTC+CGG | + | chr3_4:16506799-16506818 | Msa0492640:intron | 15.0% |
!! | TAAATGTGATGTAAATTAAA+AGG | - | chr3_4:16507142-16507161 | None:intergenic | 15.0% |
!! | TTGTCATATCATATTATATT+TGG | + | chr3_4:16508073-16508092 | Msa0492640:three_prime_UTR | 15.0% |
!!! | TGTAATAATTTTGATCACAT+GGG | - | chr3_4:16498382-16498401 | None:intergenic | 20.0% |
!!! | TTGTAATAATTTTGATCACA+TGG | - | chr3_4:16498383-16498402 | None:intergenic | 20.0% |
!! | AAATGAAAGTTTAGTTAAGT+TGG | - | chr3_4:16498674-16498693 | None:intergenic | 20.0% |
!! | AATAAAAGTTTAACTGAGTT+GGG | - | chr3_4:16499087-16499106 | None:intergenic | 20.0% |
!! | AGTTATAAATTGTAATGGTA+CGG | + | chr3_4:16499122-16499141 | Msa0492640:intron | 20.0% |
!! | AATATATAACAGCATAGTAT+TGG | - | chr3_4:16499347-16499366 | None:intergenic | 20.0% |
!! | AATACTATGCTGTTATATAT+TGG | + | chr3_4:16499346-16499365 | Msa0492640:intron | 20.0% |
!!! | ATGTAGTCTTTGTTTAAATT+GGG | + | chr3_4:16499524-16499543 | Msa0492640:intron | 20.0% |
!!! | TTTGTTTAAATTGGGTTTTA+TGG | + | chr3_4:16499532-16499551 | Msa0492640:intron | 20.0% |
!!! | TGGTGTTTTTTTTGTTTTTT+TGG | + | chr3_4:16499568-16499587 | Msa0492640:intron | 20.0% |
!!! | TTTGTTTTTTTGGAATTGTT+TGG | + | chr3_4:16499578-16499597 | Msa0492640:intron | 20.0% |
!! | CAGTTATATATACCTATAAA+GGG | - | chr3_4:16499871-16499890 | None:intergenic | 20.0% |
!!! | AGATTTAGCACATTTTTAAT+AGG | + | chr3_4:16499991-16500010 | Msa0492640:intron | 20.0% |
!!! | GATTTAGCACATTTTTAATA+GGG | + | chr3_4:16499992-16500011 | Msa0492640:intron | 20.0% |
!!! | ATTTAGCACATTTTTAATAG+GGG | + | chr3_4:16499993-16500012 | Msa0492640:intron | 20.0% |
!! | ATTAGTTATAATTCACAACA+AGG | - | chr3_4:16500440-16500459 | None:intergenic | 20.0% |
!! | TGAATTGTCTATTTATTGTT+AGG | + | chr3_4:16500464-16500483 | Msa0492640:intron | 20.0% |
!! | ACAATTTCAAAGCATATTAA+AGG | - | chr3_4:16500505-16500524 | None:intergenic | 20.0% |
!!! | ATCTTTTTGTAATTCATTAC+CGG | + | chr3_4:16500559-16500578 | Msa0492640:intron | 20.0% |
!! | TATTCATCCATAAAAATGAA+TGG | - | chr3_4:16500619-16500638 | None:intergenic | 20.0% |
!!! | AATTAATTTTCTCTCCTAAA+GGG | - | chr3_4:16500777-16500796 | None:intergenic | 20.0% |
!!! | AAATTAATTTTCTCTCCTAA+AGG | - | chr3_4:16500778-16500797 | None:intergenic | 20.0% |
!!! | TCTTGTTTAGAAACTTTAAA+TGG | + | chr3_4:16500961-16500980 | Msa0492640:intron | 20.0% |
!! | AAAAATCATCATTACAAACA+TGG | - | chr3_4:16501048-16501067 | None:intergenic | 20.0% |
!! | ACTTAAAAGTTAAAACAAAG+TGG | + | chr3_4:16501741-16501760 | Msa0492640:intron | 20.0% |
!! | CTTAAAAGTTAAAACAAAGT+GGG | + | chr3_4:16501742-16501761 | Msa0492640:intron | 20.0% |
!! | ATCTTAATACATAAACTTCA+TGG | - | chr3_4:16501881-16501900 | None:intergenic | 20.0% |
!! | AAGAACATGTTAATTAGATA+AGG | - | chr3_4:16501906-16501925 | None:intergenic | 20.0% |
!!! | TAAGTTGATCTATATATACT+TGG | + | chr3_4:16502734-16502753 | Msa0492640:intron | 20.0% |
!! | TCACATATTGCATAATAATA+GGG | - | chr3_4:16503329-16503348 | None:intergenic | 20.0% |
!! | TTCACATATTGCATAATAAT+AGG | - | chr3_4:16503330-16503349 | None:intergenic | 20.0% |
!! | TAAAATAGTATAGTTAACCA+TGG | - | chr3_4:16503601-16503620 | None:intergenic | 20.0% |
!! | AAAGTTATAGTGATACAATT+AGG | - | chr3_4:16503659-16503678 | None:intergenic | 20.0% |
!!! | ATTGTCTTTTAAAAAGTTCA+TGG | + | chr3_4:16503767-16503786 | Msa0492640:intron | 20.0% |
!!! | TTGTAAACAACTATTTTTGA+TGG | + | chr3_4:16503814-16503833 | Msa0492640:intron | 20.0% |
!!! | ATGGCTTGTATTAAATATTA+GGG | + | chr3_4:16503853-16503872 | Msa0492640:intron | 20.0% |
!!! | TCTAATGTTTTTTGATACTT+AGG | + | chr3_4:16503876-16503895 | Msa0492640:intron | 20.0% |
!!! | CTAATGTTTTTTGATACTTA+GGG | + | chr3_4:16503877-16503896 | Msa0492640:intron | 20.0% |
!! | ATACAAATTGAAAGTCAAAT+TGG | + | chr3_4:16503906-16503925 | Msa0492640:intron | 20.0% |
!!! | AATTTTAATATTGGATGATC+GGG | + | chr3_4:16504169-16504188 | Msa0492640:CDS | 20.0% |
!! | ATTTACTAAACTACTATCAT+GGG | - | chr3_4:16504470-16504489 | None:intergenic | 20.0% |
!! | AGAAAAGAGGTAAAATAATT+AGG | + | chr3_4:16504493-16504512 | Msa0492640:intron | 20.0% |
!! | GAAAAGAGGTAAAATAATTA+GGG | + | chr3_4:16504494-16504513 | Msa0492640:intron | 20.0% |
!! | AAAAGAGGTAAAATAATTAG+GGG | + | chr3_4:16504495-16504514 | Msa0492640:intron | 20.0% |
!!! | TAAAATAATTAGGGGTATTT+TGG | + | chr3_4:16504503-16504522 | Msa0492640:intron | 20.0% |
!! | TCAAAGAGAATCTTATAAAA+AGG | + | chr3_4:16504554-16504573 | Msa0492640:intron | 20.0% |
!! | CAAAGAGAATCTTATAAAAA+GGG | + | chr3_4:16504555-16504574 | Msa0492640:intron | 20.0% |
!!! | GAACTTAATATTTCTATTGT+TGG | + | chr3_4:16504687-16504706 | Msa0492640:intron | 20.0% |
!! | ATTAAAAAATCACCTCTATT+TGG | - | chr3_4:16504770-16504789 | None:intergenic | 20.0% |
!! | AATATATATGCTTTACAGTT+TGG | - | chr3_4:16504826-16504845 | None:intergenic | 20.0% |
!!! | TGATATTTTCAAAGGAAAAA+CGG | - | chr3_4:16504983-16505002 | None:intergenic | 20.0% |
!!! | ATAATTTAGTGTCTAGATTT+TGG | + | chr3_4:16505008-16505027 | Msa0492640:intron | 20.0% |
!! | AATAAATCAAAAGAGGTAAT+GGG | - | chr3_4:16505174-16505193 | None:intergenic | 20.0% |
!! | TAATAAATCAAAAGAGGTAA+TGG | - | chr3_4:16505175-16505194 | None:intergenic | 20.0% |
!!! | TACCTCTTTTGATTTATTAA+TGG | + | chr3_4:16505176-16505195 | Msa0492640:intron | 20.0% |
!!! | TTTTGATTTATTAATGGTGT+TGG | + | chr3_4:16505182-16505201 | Msa0492640:intron | 20.0% |
!!! | GTAAAAATATTTTAGACTGT+CGG | + | chr3_4:16505842-16505861 | Msa0492640:intron | 20.0% |
!!! | GAATATTGCATATTTTCATA+AGG | + | chr3_4:16506034-16506053 | Msa0492640:intron | 20.0% |
!! | TCCATATGAATTTGAAAATA+GGG | - | chr3_4:16506163-16506182 | None:intergenic | 20.0% |
!!! | TTAGTTGCTATTTTGATATT+GGG | + | chr3_4:16506451-16506470 | Msa0492640:intron | 20.0% |
!!! | ATCATTACATTTACATTTTC+TGG | + | chr3_4:16506762-16506781 | Msa0492640:intron | 20.0% |
!! | GGAATAAATAACCTTAAATT+TGG | - | chr3_4:16506800-16506819 | None:intergenic | 20.0% |
!! | GTAATATTGATAAATTGCTT+GGG | - | chr3_4:16506921-16506940 | None:intergenic | 20.0% |
!! | TGTAATATTGATAAATTGCT+TGG | - | chr3_4:16506922-16506941 | None:intergenic | 20.0% |
!! | ATTCAAGAATTACAAGATAA+CGG | - | chr3_4:16507102-16507121 | None:intergenic | 20.0% |
!! | AACATATAGGATAAATAGTT+AGG | - | chr3_4:16507286-16507305 | None:intergenic | 20.0% |
!!! | AATTTATTGACTTGATACTT+GGG | - | chr3_4:16507462-16507481 | None:intergenic | 20.0% |
!!! | TAATTTATTGACTTGATACT+TGG | - | chr3_4:16507463-16507482 | None:intergenic | 20.0% |
!! | NNNNNNGTTTATGAGAATCT+TGG | + | chr3_4:16507577-16507596 | Msa0492640:intron | 20.0% |
!! | NNNNNGTTTATGAGAATCTT+GGG | + | chr3_4:16507578-16507597 | Msa0492640:intron | 20.0% |
!! | TAAAAAAAACTCAACTTTGA+GGG | - | chr3_4:16507840-16507859 | None:intergenic | 20.0% |
!! | ATAAAAAAAACTCAACTTTG+AGG | - | chr3_4:16507841-16507860 | None:intergenic | 20.0% |
!! | TAAAGTGATATCTCAAAAAA+TGG | - | chr3_4:16507890-16507909 | None:intergenic | 20.0% |
!! | ACATACACATTACAATAAAA+AGG | - | chr3_4:16507919-16507938 | None:intergenic | 20.0% |
!!! | TAGTTTGAGTTTTAGTTAAT+TGG | + | chr3_4:16507950-16507969 | Msa0492640:three_prime_UTR | 20.0% |
!!! | TATTTTTAAGCATGTGTTTT+TGG | + | chr3_4:16508112-16508131 | Msa0492640:three_prime_UTR | 20.0% |
!! | AATCTTTGATAGTTCGAATT+GGG | - | chr3_4:16498303-16498322 | None:intergenic | 25.0% |
!! | AAATCTTTGATAGTTCGAAT+TGG | - | chr3_4:16498304-16498323 | None:intergenic | 25.0% |
! | TTGAAAAACATACTTAACAG+TGG | - | chr3_4:16498329-16498348 | None:intergenic | 25.0% |
! | ACATGAATAGTGACAAAAAA+TGG | - | chr3_4:16498358-16498377 | None:intergenic | 25.0% |
! | TATAATATGCCAATGAAAGT+TGG | + | chr3_4:16498513-16498532 | Msa0492640:intron | 25.0% |
! | ATGTAGTTGTAAAATGAGAA+TGG | + | chr3_4:16498704-16498723 | Msa0492640:intron | 25.0% |
! | ATGTAGTTATAAAATGGCAA+TGG | + | chr3_4:16498917-16498936 | Msa0492640:intron | 25.0% |
! | GAATAAAAGTTTAACTGAGT+TGG | - | chr3_4:16499088-16499107 | None:intergenic | 25.0% |
! | GATATCTTTGTAAAGTGATA+AGG | + | chr3_4:16499290-16499309 | Msa0492640:intron | 25.0% |
!! | GTTATTTAGATTAGGTTTTG+TGG | + | chr3_4:16499317-16499336 | Msa0492640:intron | 25.0% |
!! | AATGCTTTTCACTCAAAATT+TGG | - | chr3_4:16499434-16499453 | None:intergenic | 25.0% |
!! | GATGTAGTCTTTGTTTAAAT+TGG | + | chr3_4:16499523-16499542 | Msa0492640:intron | 25.0% |
! | TTTATGGTGTTCAAATCTAA+TGG | + | chr3_4:16499548-16499567 | Msa0492640:intron | 25.0% |
!!! | TTTTTTTGGAATTGTTTGGA+AGG | + | chr3_4:16499582-16499601 | Msa0492640:intron | 25.0% |
!!! | TTTTTTGGAATTGTTTGGAA+GGG | + | chr3_4:16499583-16499602 | Msa0492640:intron | 25.0% |
! | CAAAATAAATGGAAAGCTAA+TGG | - | chr3_4:16499736-16499755 | None:intergenic | 25.0% |
!!! | TCTGTTTTTTCCAATCTTAT+AGG | + | chr3_4:16499777-16499796 | Msa0492640:intron | 25.0% |
!! | AGTTTTCTTTCCTATAAGAT+TGG | - | chr3_4:16499790-16499809 | None:intergenic | 25.0% |
! | CTTATAGGAAAGAAAACTAA+AGG | + | chr3_4:16499792-16499811 | Msa0492640:intron | 25.0% |
!! | CATTATTGATAACCCTTTAT+AGG | + | chr3_4:16499856-16499875 | Msa0492640:CDS | 25.0% |
! | GCAGTTATATATACCTATAA+AGG | - | chr3_4:16499872-16499891 | None:intergenic | 25.0% |
!!! | TTTATTTGGTGGGTTAAATA+TGG | + | chr3_4:16499929-16499948 | Msa0492640:intron | 25.0% |
!!! | TATGGTTTTTGAAGTTGTTA+TGG | + | chr3_4:16499947-16499966 | Msa0492640:intron | 25.0% |
! | TGTGTGTTTAAATAAAGTGA+TGG | + | chr3_4:16500138-16500157 | Msa0492640:intron | 25.0% |
! | TTTAAATAAAGTGATGGCTA+AGG | + | chr3_4:16500144-16500163 | Msa0492640:intron | 25.0% |
!! | CTTTTGATCAATGAATTTTC+AGG | + | chr3_4:16500179-16500198 | Msa0492640:intron | 25.0% |
! | ATGAAGACATTGATATCTAA+AGG | + | chr3_4:16500274-16500293 | Msa0492640:CDS | 25.0% |
! | ACATAAAAGATCAAGAGAAA+AGG | - | chr3_4:16500369-16500388 | None:intergenic | 25.0% |
! | TTCTTATGTTACTATAGAGA+AGG | - | chr3_4:16500529-16500548 | None:intergenic | 25.0% |
! | TTTCTCCATTCCTATATTTA+AGG | - | chr3_4:16500703-16500722 | None:intergenic | 25.0% |
! | TAGTTAGTTGAAAACTTGAA+AGG | + | chr3_4:16500846-16500865 | Msa0492640:intron | 25.0% |
! | AGTTAGTTGAAAACTTGAAA+GGG | + | chr3_4:16500847-16500866 | Msa0492640:intron | 25.0% |
! | TGTTGAAATTTCTGTTCATA+TGG | + | chr3_4:16501166-16501185 | Msa0492640:CDS | 25.0% |
! | CATATTCATACTATATGCTT+CGG | + | chr3_4:16501351-16501370 | Msa0492640:intron | 25.0% |
! | ATGTGTGATGCTTAATTATA+TGG | + | chr3_4:16501412-16501431 | Msa0492640:intron | 25.0% |
! | TTGTTTATTAATTGGACAAG+TGG | - | chr3_4:16501717-16501736 | None:intergenic | 25.0% |
!! | CTGCATATCTTACATATTTT+GGG | + | chr3_4:16501793-16501812 | Msa0492640:intron | 25.0% |
!!! | TTACACATCTTTTGAAAAGA+AGG | + | chr3_4:16501854-16501873 | Msa0492640:intron | 25.0% |
!! | TTCATCAATATTTGAGATTC+TGG | - | chr3_4:16502158-16502177 | None:intergenic | 25.0% |
! | AATGCTAATACTGTTGTAAA+TGG | + | chr3_4:16502176-16502195 | Msa0492640:CDS | 25.0% |
! | TGTTCAAGGTCAATAATAAA+AGG | - | chr3_4:16502420-16502439 | None:intergenic | 25.0% |
! | TTTACAAGAAATGATGTTCA+AGG | - | chr3_4:16502434-16502453 | None:intergenic | 25.0% |
! | AACATCATTTCTTGTAAAGT+TGG | + | chr3_4:16502436-16502455 | Msa0492640:intron | 25.0% |
! | AATTGAAATCTGTTCAAGAA+TGG | - | chr3_4:16502549-16502568 | None:intergenic | 25.0% |
!! | CCTTAACTTCAATTTTTCAT+CGG | + | chr3_4:16502824-16502843 | Msa0492640:intron | 25.0% |
!! | GATTTTGTCAAAAGGAATAA+GGG | - | chr3_4:16502895-16502914 | None:intergenic | 25.0% |
!! | TGATTTTGTCAAAAGGAATA+AGG | - | chr3_4:16502896-16502915 | None:intergenic | 25.0% |
!! | TTATTCCTTTTGACAAAATC+AGG | + | chr3_4:16502895-16502914 | Msa0492640:intron | 25.0% |
! | ATAAATCACTAAGTGGATAT+AGG | - | chr3_4:16503234-16503253 | None:intergenic | 25.0% |
! | AGATGAAATAAATCACTAAG+TGG | - | chr3_4:16503241-16503260 | None:intergenic | 25.0% |
!! | AGCTTAGAATTAATGGATAA+AGG | - | chr3_4:16503289-16503308 | None:intergenic | 25.0% |
! | TATTATGCAATATGTGAAAC+TGG | + | chr3_4:16503332-16503351 | Msa0492640:intron | 25.0% |
! | AACTGAATGTACCAAATAAA+GGG | - | chr3_4:16503531-16503550 | None:intergenic | 25.0% |
! | CTAATGTATTTAAACCAAGA+AGG | - | chr3_4:16503634-16503653 | None:intergenic | 25.0% |
!!! | AAACAACTATTTTTGATGGA+AGG | + | chr3_4:16503818-16503837 | Msa0492640:intron | 25.0% |
!!! | AACAACTATTTTTGATGGAA+GGG | + | chr3_4:16503819-16503838 | Msa0492640:intron | 25.0% |
!! | GATGGCTTGTATTAAATATT+AGG | + | chr3_4:16503852-16503871 | Msa0492640:intron | 25.0% |
! | AAATTGAAAGTCAAATTGGT+GGG | + | chr3_4:16503910-16503929 | Msa0492640:intron | 25.0% |
! | AAGGAATACAAAACAAAGTT+AGG | - | chr3_4:16503951-16503970 | None:intergenic | 25.0% |
! | TCACGGAAATTAAAAAAAGT+TGG | + | chr3_4:16504368-16504387 | Msa0492640:intron | 25.0% |
! | GATTTACTAAACTACTATCA+TGG | - | chr3_4:16504471-16504490 | None:intergenic | 25.0% |
! | TTTAGTAAATCGTAGAAAAG+AGG | + | chr3_4:16504480-16504499 | Msa0492640:intron | 25.0% |
! | TATTTGTATTTACAGCAGTT+TGG | + | chr3_4:16504627-16504646 | Msa0492640:intron | 25.0% |
!!! | TGTGAGTTGTTTCTAATTAA+TGG | + | chr3_4:16504657-16504676 | Msa0492640:intron | 25.0% |
!!! | TTAAGAATTTTTTTTCCCTG+TGG | + | chr3_4:16505057-16505076 | Msa0492640:intron | 25.0% |
!! | AAACATTTTCATTTATGCAG+TGG | - | chr3_4:16505084-16505103 | None:intergenic | 25.0% |
!! | GAACAATTTTTACAACTTTC+TGG | - | chr3_4:16505140-16505159 | None:intergenic | 25.0% |
! | CACCATTAATAAATCAAAAG+AGG | - | chr3_4:16505181-16505200 | None:intergenic | 25.0% |
! | GCATACAAAATAAATCCATT+TGG | + | chr3_4:16505866-16505885 | Msa0492640:intron | 25.0% |
!!! | AACAGATTTCTAAAACCAAA+TGG | - | chr3_4:16505884-16505903 | None:intergenic | 25.0% |
! | TAAACATATCATCCAATGAA+TGG | + | chr3_4:16505903-16505922 | Msa0492640:intron | 25.0% |
! | CCATATGAATTTGAAAATAG+GGG | - | chr3_4:16506162-16506181 | None:intergenic | 25.0% |
! | GTCCATATGAATTTGAAAAT+AGG | - | chr3_4:16506164-16506183 | None:intergenic | 25.0% |
! | CTTCATTGAATTCATGAATT+TGG | + | chr3_4:16506283-16506302 | Msa0492640:intron | 25.0% |
! | TTGAATTCATGAATTTGGTT+TGG | + | chr3_4:16506288-16506307 | Msa0492640:intron | 25.0% |
!!! | GTTAGTTGCTATTTTGATAT+TGG | + | chr3_4:16506450-16506469 | Msa0492640:intron | 25.0% |
!!! | TAGTTGCTATTTTGATATTG+GGG | + | chr3_4:16506452-16506471 | Msa0492640:intron | 25.0% |
! | CAAATTAACAAACAAGATCA+TGG | - | chr3_4:16506560-16506579 | None:intergenic | 25.0% |
!! | CATGATCTTGTTTGTTAATT+TGG | + | chr3_4:16506558-16506577 | Msa0492640:intron | 25.0% |
! | TAAGAGTTATGCCAAATTTA+AGG | + | chr3_4:16506786-16506805 | Msa0492640:intron | 25.0% |
! | TTGAAGCAAATTATACTAGA+AGG | - | chr3_4:16507170-16507189 | None:intergenic | 25.0% |
! | GCTGCAATTTCTTAATAAAT+TGG | + | chr3_4:16507240-16507259 | Msa0492640:intron | 25.0% |
!!! | ATTTTGAAACTCATAAATGC+AGG | + | chr3_4:16507330-16507349 | Msa0492640:intron | 25.0% |
!!! | ACCAATTGTTTGATTTGATT+AGG | + | chr3_4:16507700-16507719 | Msa0492640:intron | 25.0% |
! | TCCTAATCAAATCAAACAAT+TGG | - | chr3_4:16507704-16507723 | None:intergenic | 25.0% |
!!! | ATTGTTTGATTTGATTAGGA+TGG | + | chr3_4:16507704-16507723 | Msa0492640:intron | 25.0% |
! | CAAAGTAATAATGTGATCAA+TGG | + | chr3_4:16507761-16507780 | Msa0492640:CDS | 25.0% |
! | AAAAAAAACTCAACTTTGAG+GGG | - | chr3_4:16507839-16507858 | None:intergenic | 25.0% |
!! | GTCATCTGTATATTTTGTAA+AGG | + | chr3_4:16507972-16507991 | Msa0492640:three_prime_UTR | 25.0% |
! | AGTATGAACAATACTTTGAT+TGG | - | chr3_4:16508014-16508033 | None:intergenic | 25.0% |
TGAATAGTGACAAAAAATGG+AGG | - | chr3_4:16498355-16498374 | None:intergenic | 30.0% | |
TAGTTGTAAAATGAGAATGG+AGG | + | chr3_4:16498707-16498726 | Msa0492640:intron | 30.0% | |
AGTTAACCCATATCTTGTAA+GGG | + | chr3_4:16498746-16498765 | Msa0492640:intron | 30.0% | |
TAGTTATAAAATGGCAATGG+AGG | + | chr3_4:16498920-16498939 | Msa0492640:intron | 30.0% | |
! | TGAGAAATGTCCATATTTTG+AGG | + | chr3_4:16499223-16499242 | Msa0492640:intron | 30.0% |
!! | GAGAAATGTCCATATTTTGA+GGG | + | chr3_4:16499224-16499243 | Msa0492640:intron | 30.0% |
AAACTCTTTCCCTCAAAATA+TGG | - | chr3_4:16499236-16499255 | None:intergenic | 30.0% | |
!! | ATTTTGAGGGAAAGAGTTTT+CGG | + | chr3_4:16499237-16499256 | Msa0492640:intron | 30.0% |
AAGGCATGGTTATTTAGATT+AGG | + | chr3_4:16499309-16499328 | Msa0492640:intron | 30.0% | |
!!! | TTTTGAGTGAAAAGCATTGT+TGG | + | chr3_4:16499436-16499455 | Msa0492640:intron | 30.0% |
!! | TTTGAGTGAAAAGCATTGTT+GGG | + | chr3_4:16499437-16499456 | Msa0492640:intron | 30.0% |
ATGTGTTTGTGAAATGATGA+TGG | + | chr3_4:16499495-16499514 | Msa0492640:intron | 30.0% | |
!!! | TTTTTGGAATTGTTTGGAAG+GGG | + | chr3_4:16499584-16499603 | Msa0492640:intron | 30.0% |
TTTAATAGGGGAACTTCAAA+TGG | + | chr3_4:16500005-16500024 | Msa0492640:intron | 30.0% | |
TTAATAGGGGAACTTCAAAT+GGG | + | chr3_4:16500006-16500025 | Msa0492640:intron | 30.0% | |
GAATGAATTTATGCGTAAAC+AGG | + | chr3_4:16500028-16500047 | Msa0492640:CDS | 30.0% | |
ATAGAAAACCATACTTTGCT+GGG | - | chr3_4:16500321-16500340 | None:intergenic | 30.0% | |
AATAGAAAACCATACTTTGC+TGG | - | chr3_4:16500322-16500341 | None:intergenic | 30.0% | |
AGTTATAATTCACAACAAGG+AGG | - | chr3_4:16500437-16500456 | None:intergenic | 30.0% | |
CCATAAAAATGAATGGACAA+AGG | - | chr3_4:16500612-16500631 | None:intergenic | 30.0% | |
!! | CCTTTGTCCATTCATTTTTA+TGG | + | chr3_4:16500609-16500628 | Msa0492640:intron | 30.0% |
ATTCCTATATTTAAGGATGG+AGG | - | chr3_4:16500696-16500715 | None:intergenic | 30.0% | |
TCCATCCTTAAATATAGGAA+TGG | + | chr3_4:16500695-16500714 | Msa0492640:intron | 30.0% | |
TCCATTCCTATATTTAAGGA+TGG | - | chr3_4:16500699-16500718 | None:intergenic | 30.0% | |
AATATAGGAATGGAGAAAGT+TGG | + | chr3_4:16500705-16500724 | Msa0492640:intron | 30.0% | |
! | GTTTTACCATTTTACCCTTT+AGG | + | chr3_4:16500760-16500779 | Msa0492640:intron | 30.0% |
GTTAGTTGAAAACTTGAAAG+GGG | + | chr3_4:16500848-16500867 | Msa0492640:intron | 30.0% | |
!!! | TGATGATTTTTGTTGTTTGC+AGG | + | chr3_4:16501057-16501076 | Msa0492640:intron | 30.0% |
AAACAACGACTTTGAATAAG+AGG | - | chr3_4:16501316-16501335 | None:intergenic | 30.0% | |
ACATAAAAGGAGCAAGAAAA+GGG | - | chr3_4:16501377-16501396 | None:intergenic | 30.0% | |
! | TTTAGAGCTTTCCACATAAA+AGG | - | chr3_4:16501390-16501409 | None:intergenic | 30.0% |
! | CATTTTCATGAACTTACCAT+TGG | + | chr3_4:16501469-16501488 | Msa0492640:intron | 30.0% |
ACAACTAATACAAGAAACAC+AGG | - | chr3_4:16501543-16501562 | None:intergenic | 30.0% | |
TTATGCTGAGTAAATTCTCA+TGG | + | chr3_4:16501563-16501582 | Msa0492640:intron | 30.0% | |
GACATAGAAAATGAAACAAG+TGG | - | chr3_4:16501599-16501618 | None:intergenic | 30.0% | |
TCTAGTGTTTATGTGAACAT+TGG | + | chr3_4:16501678-16501697 | Msa0492640:intron | 30.0% | |
CTAGTGTTTATGTGAACATT+GGG | + | chr3_4:16501679-16501698 | Msa0492640:intron | 30.0% | |
! | GCTGCATATCTTACATATTT+TGG | + | chr3_4:16501792-16501811 | Msa0492640:intron | 30.0% |
! | ATGAGACATCTTTATTTGGA+TGG | - | chr3_4:16502079-16502098 | None:intergenic | 30.0% |
AGAGATGAGACATCTTTATT+TGG | - | chr3_4:16502083-16502102 | None:intergenic | 30.0% | |
! | TGTTTTATGTCAACTTAGAG+AGG | + | chr3_4:16502112-16502131 | Msa0492640:CDS | 30.0% |
CATTAAGAAACACTGAAACA+TGG | - | chr3_4:16502213-16502232 | None:intergenic | 30.0% | |
CAAGTTTGACAACTATGAAA+GGG | - | chr3_4:16502625-16502644 | None:intergenic | 30.0% | |
CCGATGAAAAATTGAAGTTA+AGG | - | chr3_4:16502827-16502846 | None:intergenic | 30.0% | |
ATGAAGATGACACTTGAATT+GGG | - | chr3_4:16503009-16503028 | None:intergenic | 30.0% | |
AAAGAGAAAGAGTTACACAA+TGG | - | chr3_4:16503170-16503189 | None:intergenic | 30.0% | |
! | GAATAATGTTTTCAACGCTT+CGG | + | chr3_4:16503194-16503213 | Msa0492640:intron | 30.0% |
AATGGATAAAGGTGATATGT+AGG | - | chr3_4:16503278-16503297 | None:intergenic | 30.0% | |
CATTGCAAGCTTAGAATTAA+TGG | - | chr3_4:16503296-16503315 | None:intergenic | 30.0% | |
TAAAGGGAACAATTGTTGTA+AGG | - | chr3_4:16503515-16503534 | None:intergenic | 30.0% | |
CAACAATTGTTCCCTTTATT+TGG | + | chr3_4:16503517-16503536 | Msa0492640:intron | 30.0% | |
CAACTGAATGTACCAAATAA+AGG | - | chr3_4:16503532-16503551 | None:intergenic | 30.0% | |
TTTAGTTGTACTATCCTTCT+TGG | + | chr3_4:16503617-16503636 | Msa0492640:intron | 30.0% | |
!!! | ATGTTTTTTGATACTTAGGG+TGG | + | chr3_4:16503880-16503899 | Msa0492640:intron | 30.0% |
CAAATTGAAAGTCAAATTGG+TGG | + | chr3_4:16503909-16503928 | Msa0492640:intron | 30.0% | |
CACAATACAAAAGCTAAACA+AGG | + | chr3_4:16504067-16504086 | Msa0492640:CDS | 30.0% | |
GGTTAGTAACCTAAATTGAA+TGG | + | chr3_4:16504210-16504229 | Msa0492640:intron | 30.0% | |
TGAAAAAGGCCATTCAATTT+AGG | - | chr3_4:16504222-16504241 | None:intergenic | 30.0% | |
ACAAAAACCTTGAGTGAAAA+AGG | - | chr3_4:16504236-16504255 | None:intergenic | 30.0% | |
AATTTCCGTGATTTAGTCAA+TGG | - | chr3_4:16504359-16504378 | None:intergenic | 30.0% | |
TTCTCAAGAGTCCTATATTT+AGG | + | chr3_4:16504588-16504607 | Msa0492640:intron | 30.0% | |
TCTCAAGAGTCCTATATTTA+GGG | + | chr3_4:16504589-16504608 | Msa0492640:intron | 30.0% | |
CAACTTCAAAATCCAAATAG+AGG | + | chr3_4:16504755-16504774 | Msa0492640:CDS | 30.0% | |
TAACAACAACTACTTGTACA+TGG | - | chr3_4:16504799-16504818 | None:intergenic | 30.0% | |
! | CAATTTTTACAACTTTCTGG+TGG | - | chr3_4:16505137-16505156 | None:intergenic | 30.0% |
TAATGTTACAAACTTGGACT+TGG | + | chr3_4:16505274-16505293 | Msa0492640:intron | 30.0% | |
! | TGTTGGATTTTATTGTTGAG+AGG | + | chr3_4:16505450-16505469 | Msa0492640:CDS | 30.0% |
ATGATTTACGCAGTTCAATT+AGG | + | chr3_4:16505483-16505502 | Msa0492640:CDS | 30.0% | |
TGATTTACGCAGTTCAATTA+GGG | + | chr3_4:16505484-16505503 | Msa0492640:CDS | 30.0% | |
!! | GTATTCCTTCTAAGATAGTT+TGG | + | chr3_4:16505546-16505565 | Msa0492640:intron | 30.0% |
ATAGTCCAAACTATCTTAGA+AGG | - | chr3_4:16505554-16505573 | None:intergenic | 30.0% | |
!! | CAAGTTGATGATTTGAGTAT+TGG | + | chr3_4:16505597-16505616 | Msa0492640:intron | 30.0% |
!!! | TTTTCCTGTTCTGAAGAAAA+TGG | + | chr3_4:16505659-16505678 | Msa0492640:intron | 30.0% |
GATTAATTTCTATGCACTGA+CGG | + | chr3_4:16505703-16505722 | Msa0492640:intron | 30.0% | |
!! | ACTCTATAGGGTCATTTTAT+AGG | + | chr3_4:16505761-16505780 | Msa0492640:intron | 30.0% |
TCTCAACAAATATCTATGTG+AGG | + | chr3_4:16505799-16505818 | Msa0492640:intron | 30.0% | |
! | TACGATTTCCTATCTGTTTT+TGG | + | chr3_4:16505935-16505954 | Msa0492640:intron | 30.0% |
ACATCTTACCAAAAACAGAT+AGG | - | chr3_4:16505946-16505965 | None:intergenic | 30.0% | |
ATATTGCCATTCAATGTCAT+CGG | + | chr3_4:16506004-16506023 | Msa0492640:intron | 30.0% | |
ATGAATTTGAAAATAGGGGT+CGG | - | chr3_4:16506158-16506177 | None:intergenic | 30.0% | |
! | CCCCTATTTTCAAATTCATA+TGG | + | chr3_4:16506159-16506178 | Msa0492640:intron | 30.0% |
!!! | AGTTGCTATTTTGATATTGG+GGG | + | chr3_4:16506453-16506472 | Msa0492640:intron | 30.0% |
!! | TGTTTGTTAATTTGGTGTTG+TGG | + | chr3_4:16506566-16506585 | Msa0492640:intron | 30.0% |
!! | AGAGTTCTTATGTTTTGTTC+TGG | + | chr3_4:16506594-16506613 | Msa0492640:intron | 30.0% |
CTAACAAATTCATCATACGA+AGG | - | chr3_4:16506989-16507008 | None:intergenic | 30.0% | |
!! | CGTATGATGAATTTGTTAGA+AGG | + | chr3_4:16506990-16507009 | Msa0492640:CDS | 30.0% |
GTAAATTAAAAGGATACTCG+AGG | - | chr3_4:16507132-16507151 | None:intergenic | 30.0% | |
! | TAAGGTCAAAAAGTATGATG+TGG | - | chr3_4:16507199-16507218 | None:intergenic | 30.0% |
TTATGCAAAACATAGGCTTA+AGG | - | chr3_4:16507217-16507236 | None:intergenic | 30.0% | |
TCAAATCAAACAATTGGTGT+GGG | - | chr3_4:16507698-16507717 | None:intergenic | 30.0% | |
ATCAAATCAAACAATTGGTG+TGG | - | chr3_4:16507699-16507718 | None:intergenic | 30.0% | |
AAATGGTATTCACCTTTACT+TGG | - | chr3_4:16507873-16507892 | None:intergenic | 30.0% | |
GACAATGACATTCTAACATT+TGG | - | chr3_4:16508058-16508077 | None:intergenic | 30.0% | |
GAAGAACAAGTGGAAAGAAA+TGG | + | chr3_4:16498198-16498217 | Msa0492640:CDS | 35.0% | |
TCTTTCCGAAAACGTTGAAA+TGG | + | chr3_4:16498237-16498256 | Msa0492640:CDS | 35.0% | |
!!! | AAGTGCCATTTCAACGTTTT+CGG | - | chr3_4:16498245-16498264 | None:intergenic | 35.0% |
! | GATAGTTCGAATTGGGTTTT+TGG | - | chr3_4:16498296-16498315 | None:intergenic | 35.0% |
CCAACTAAACCAACTTTCAT+TGG | - | chr3_4:16498525-16498544 | None:intergenic | 35.0% | |
! | CCAATGAAAGTTGGTTTAGT+TGG | + | chr3_4:16498522-16498541 | Msa0492640:intron | 35.0% |
GAGTTAACCCATATCTTGTA+AGG | + | chr3_4:16498745-16498764 | Msa0492640:intron | 35.0% | |
TATAAAATGGCAATGGAGGT+TGG | + | chr3_4:16498924-16498943 | Msa0492640:intron | 35.0% | |
AGTTGACCCATATCTCTTAA+GGG | + | chr3_4:16498961-16498980 | Msa0492640:intron | 35.0% | |
!!! | AGTTTTCGGTGCTTAATGAT+TGG | + | chr3_4:16499251-16499270 | Msa0492640:intron | 35.0% |
CTTTGTAAAGTGATAAGGCA+TGG | + | chr3_4:16499295-16499314 | Msa0492640:intron | 35.0% | |
! | ATTGTTGGGTGCTTTGTTAT+TGG | + | chr3_4:16499451-16499470 | Msa0492640:intron | 35.0% |
AATAAAAACTAAACAGCCCC+AGG | - | chr3_4:16499701-16499720 | None:intergenic | 35.0% | |
!! | TGAATTTTCAGGCCAGAAAA+AGG | + | chr3_4:16500190-16500209 | Msa0492640:intron | 35.0% |
!! | GAATTTTCAGGCCAGAAAAA+GGG | + | chr3_4:16500191-16500210 | Msa0492640:intron | 35.0% |
AAAGGAAAAGCTGGACATTT+CGG | + | chr3_4:16500214-16500233 | Msa0492640:CDS | 35.0% | |
CTACCTCCATCCTTAAATAT+AGG | + | chr3_4:16500690-16500709 | Msa0492640:intron | 35.0% | |
TTCTCTCCTAAAGGGTAAAA+TGG | - | chr3_4:16500769-16500788 | None:intergenic | 35.0% | |
!!! | TACTTGCTGGTTTTACAACT+TGG | - | chr3_4:16500931-16500950 | None:intergenic | 35.0% |
TGTGACTGTCTTAAAAGATC+TGG | + | chr3_4:16501113-16501132 | Msa0492640:CDS | 35.0% | |
CTGTCTTAAAAGATCTGGAA+TGG | + | chr3_4:16501118-16501137 | Msa0492640:CDS | 35.0% | |
AGAAGTCAGTGCATATGATT+TGG | + | chr3_4:16501211-16501230 | Msa0492640:CDS | 35.0% | |
CACATAAAAGGAGCAAGAAA+AGG | - | chr3_4:16501378-16501397 | None:intergenic | 35.0% | |
! | CTTTTCTTGCTCCTTTTATG+TGG | + | chr3_4:16501376-16501395 | Msa0492640:intron | 35.0% |
! | AACGTGTTTTGTGTCAATGT+TGG | + | chr3_4:16501820-16501839 | Msa0492640:intron | 35.0% |
CTCCTGTAGTTTACAAACAT+GGG | + | chr3_4:16502005-16502024 | Msa0492640:intron | 35.0% | |
! | GCAGATTATTAGTGCTTTTG+AGG | + | chr3_4:16502040-16502059 | Msa0492640:CDS | 35.0% |
!! | GATTATTAGTGCTTTTGAGG+AGG | + | chr3_4:16502043-16502062 | Msa0492640:CDS | 35.0% |
! | ATCTTTATTTGGATGGCTTC+TGG | - | chr3_4:16502072-16502091 | None:intergenic | 35.0% |
ATAAAGATGTCTCATCTCTG+TGG | + | chr3_4:16502084-16502103 | Msa0492640:CDS | 35.0% | |
! | CTAAGTTGACATAAAACAGC+CGG | - | chr3_4:16502110-16502129 | None:intergenic | 35.0% |
TGTTCAAGAATGGTACTTAG+TGG | - | chr3_4:16502539-16502558 | None:intergenic | 35.0% | |
GCAAGTTTGACAACTATGAA+AGG | - | chr3_4:16502626-16502645 | None:intergenic | 35.0% | |
TGAGTCTACGATACTATGTA+GGG | + | chr3_4:16502664-16502683 | Msa0492640:intron | 35.0% | |
!!! | AGTTTTCAGGTGAGTTAACT+TGG | - | chr3_4:16502693-16502712 | None:intergenic | 35.0% |
! | AGACCGCACTTTATGTTTTA+TGG | + | chr3_4:16502801-16502820 | Msa0492640:intron | 35.0% |
AGGCCATAAAACATAAAGTG+CGG | - | chr3_4:16502807-16502826 | None:intergenic | 35.0% | |
! | ATGCACCTGATTTTGTCAAA+AGG | - | chr3_4:16502903-16502922 | None:intergenic | 35.0% |
GATGAAGATGACACTTGAAT+TGG | - | chr3_4:16503010-16503029 | None:intergenic | 35.0% | |
AAAGAGTTACACAATGGTTG+CGG | - | chr3_4:16503164-16503183 | None:intergenic | 35.0% | |
GGTGATATGTAGGAACAAAA+TGG | - | chr3_4:16503268-16503287 | None:intergenic | 35.0% | |
!!! | AACTATTTTTGATGGAAGGG+AGG | + | chr3_4:16503822-16503841 | Msa0492640:intron | 35.0% |
!! | GTTCCTGAAGTGTTTCTTTT+TGG | + | chr3_4:16504015-16504034 | Msa0492640:intron | 35.0% |
GTACCAAAAAGAAACACTTC+AGG | - | chr3_4:16504021-16504040 | None:intergenic | 35.0% | |
!! | TTTCTTTTTGGTACTTGTCC+TGG | + | chr3_4:16504027-16504046 | Msa0492640:intron | 35.0% |
TCAATGGTGTCCTATATTTG+GGG | - | chr3_4:16504343-16504362 | None:intergenic | 35.0% | |
GTCAATGGTGTCCTATATTT+GGG | - | chr3_4:16504344-16504363 | None:intergenic | 35.0% | |
AGTCAATGGTGTCCTATATT+TGG | - | chr3_4:16504345-16504364 | None:intergenic | 35.0% | |
AAGAGTCCTATATTTAGGGA+TGG | + | chr3_4:16504593-16504612 | Msa0492640:intron | 35.0% | |
TGAGTATTCACTTCTCTGTT+TGG | + | chr3_4:16505321-16505340 | Msa0492640:intron | 35.0% | |
! | ATTCACTGCCAAGAGTTTTA+TGG | - | chr3_4:16505427-16505446 | None:intergenic | 35.0% |
TTAACTTCTGATCCTTGTAG+CGG | - | chr3_4:16505514-16505533 | None:intergenic | 35.0% | |
! | AGTATTGGAGCATGCATATA+TGG | + | chr3_4:16505612-16505631 | Msa0492640:intron | 35.0% |
! | AACTCCATTTTCTTCAGAAC+AGG | - | chr3_4:16505666-16505685 | None:intergenic | 35.0% |
! | AAAATGGAGTTTTGCGTGTT+TGG | + | chr3_4:16505675-16505694 | Msa0492640:intron | 35.0% |
ATCCGATCAAATCACTCTAT+AGG | + | chr3_4:16505748-16505767 | Msa0492640:intron | 35.0% | |
TCCGATCAAATCACTCTATA+GGG | + | chr3_4:16505749-16505768 | Msa0492640:intron | 35.0% | |
ACCCTATAGAGTGATTTGAT+CGG | - | chr3_4:16505753-16505772 | None:intergenic | 35.0% | |
ATATGGACATTGTAGAGATG+TGG | + | chr3_4:16506176-16506195 | Msa0492640:intron | 35.0% | |
TATGGACATTGTAGAGATGT+GGG | + | chr3_4:16506177-16506196 | Msa0492640:intron | 35.0% | |
AAGCTGATATATCTTGTCGA+AGG | + | chr3_4:16506206-16506225 | Msa0492640:CDS | 35.0% | |
!!! | ATTTCTGACTTGCTTTTGCT+TGG | + | chr3_4:16506368-16506387 | Msa0492640:intron | 35.0% |
TCATGGAGTGATAACTGATA+AGG | - | chr3_4:16506543-16506562 | None:intergenic | 35.0% | |
!! | TTGTTAATTTGGTGTTGTGG+TGG | + | chr3_4:16506569-16506588 | Msa0492640:intron | 35.0% |
TCTGTTCCAAGAGATGAATA+TGG | + | chr3_4:16506636-16506655 | Msa0492640:intron | 35.0% | |
CTGTTCCAAGAGATGAATAT+GGG | + | chr3_4:16506637-16506656 | Msa0492640:intron | 35.0% | |
ATAGTCCCATATTCATCTCT+TGG | - | chr3_4:16506645-16506664 | None:intergenic | 35.0% | |
AAGAGATGAATATGGGACTA+TGG | + | chr3_4:16506644-16506663 | Msa0492640:intron | 35.0% | |
AGAGATGAATATGGGACTAT+GGG | + | chr3_4:16506645-16506664 | Msa0492640:intron | 35.0% | |
CAGACTTAATTTCATCCAGA+GGG | - | chr3_4:16506698-16506717 | None:intergenic | 35.0% | |
ACAGACTTAATTTCATCCAG+AGG | - | chr3_4:16506699-16506718 | None:intergenic | 35.0% | |
! | CTGTTTTACAACAGAGATTC+TGG | + | chr3_4:16506832-16506851 | Msa0492640:CDS | 35.0% |
! | TTTTACAACAGAGATTCTGG+AGG | + | chr3_4:16506835-16506854 | Msa0492640:CDS | 35.0% |
TTTACAACAGAGATTCTGGA+GGG | + | chr3_4:16506836-16506855 | Msa0492640:CDS | 35.0% | |
AAGATGACCATACTTCCTTA+GGG | - | chr3_4:16506897-16506916 | None:intergenic | 35.0% | |
TAAGATGACCATACTTCCTT+AGG | - | chr3_4:16506898-16506917 | None:intergenic | 35.0% | |
!!! | CACTAACTGTCATTTTTTCG+AGG | - | chr3_4:16507024-16507043 | None:intergenic | 35.0% |
TAGTTAGTACCTGCATAAGT+TGG | - | chr3_4:16507060-16507079 | None:intergenic | 35.0% | |
CAGCTCTTTATGCAAAACAT+AGG | - | chr3_4:16507224-16507243 | None:intergenic | 35.0% | |
ATACTTGGGAGAAAAGAATG+AGG | - | chr3_4:16507448-16507467 | None:intergenic | 35.0% | |
! | GTAAACTTAGAGGTATGAGT+GGG | - | chr3_4:16507676-16507695 | None:intergenic | 35.0% |
!! | GAACATTTTCCAGCTTGTTT+GGG | + | chr3_4:16507796-16507815 | Msa0492640:CDS | 35.0% |
!! | AACATTTTCCAGCTTGTTTG+GGG | + | chr3_4:16507797-16507816 | Msa0492640:CDS | 35.0% |
!! | TACTTTGATTGGTGATGTAC+AGG | - | chr3_4:16508003-16508022 | None:intergenic | 35.0% |
! | AAGTATTGTTCATACTGAGC+AGG | + | chr3_4:16508018-16508037 | Msa0492640:three_prime_UTR | 35.0% |
GAGAGATCAATTGTGTGAAG+TGG | - | chr3_4:16498079-16498098 | None:intergenic | 40.0% | |
!! | GTTCGGAATTTGTTAGGGTT+GGG | - | chr3_4:16498113-16498132 | None:intergenic | 40.0% |
!! | GTAGGGTTCGGAATTTGTTA+GGG | - | chr3_4:16498118-16498137 | None:intergenic | 40.0% |
TAACAAATTCCGAACCCTAC+CGG | + | chr3_4:16498118-16498137 | Msa0492640:five_prime_UTR | 40.0% | |
! | ACGTTTTCGGAAAGACCTTT+CGG | - | chr3_4:16498232-16498251 | None:intergenic | 40.0% |
TAACAGACCACCCACTAAAT+TGG | - | chr3_4:16498594-16498613 | None:intergenic | 40.0% | |
TTTCAGATCACCCACTAAAG+AGG | - | chr3_4:16498811-16498830 | None:intergenic | 40.0% | |
!! | TGAAAGTTGAGTTGGGTACT+GGG | - | chr3_4:16498884-16498903 | None:intergenic | 40.0% |
!! | ATGAAAGTTGAGTTGGGTAC+TGG | - | chr3_4:16498885-16498904 | None:intergenic | 40.0% |
GGCGAAATGAAAGTTGAGTT+GGG | - | chr3_4:16498891-16498910 | None:intergenic | 40.0% | |
TGGCGAAATGAAAGTTGAGT+TGG | - | chr3_4:16498892-16498911 | None:intergenic | 40.0% | |
GAGTTGACCCATATCTCTTA+AGG | + | chr3_4:16498960-16498979 | Msa0492640:intron | 40.0% | |
TAGTGTGAAGACCTCTTTAG+TGG | + | chr3_4:16498999-16499018 | Msa0492640:intron | 40.0% | |
AGTGTGAAGACCTCTTTAGT+GGG | + | chr3_4:16499000-16499019 | Msa0492640:intron | 40.0% | |
!! | TCAAGCGTAAAAGAGTGTTC+AGG | - | chr3_4:16499039-16499058 | None:intergenic | 40.0% |
AATGATGTTGAGGCTAATGC+AGG | + | chr3_4:16499616-16499635 | Msa0492640:CDS | 40.0% | |
ATGATGTTGAGGCTAATGCA+GGG | + | chr3_4:16499617-16499636 | Msa0492640:CDS | 40.0% | |
!!! | AGGCTAATGCAGGGTTTTTT+TGG | + | chr3_4:16499626-16499645 | Msa0492640:CDS | 40.0% |
!!! | GGCTAATGCAGGGTTTTTTT+GGG | + | chr3_4:16499627-16499646 | Msa0492640:CDS | 40.0% |
TTTGGTCAAGTCATCTGGTT+CGG | - | chr3_4:16499669-16499688 | None:intergenic | 40.0% | |
ACCAGATGACTTGACCAAAA+AGG | + | chr3_4:16499670-16499689 | Msa0492640:CDS | 40.0% | |
CCAGATGACTTGACCAAAAA+GGG | + | chr3_4:16499671-16499690 | Msa0492640:CDS | 40.0% | |
CTATGTCGAACATACGCAAT+TGG | - | chr3_4:16500095-16500114 | None:intergenic | 40.0% | |
! | GCTTTTCCTTTCCCTTTTTC+TGG | - | chr3_4:16500205-16500224 | None:intergenic | 40.0% |
GAAAAAGGGAAAGGAAAAGC+TGG | + | chr3_4:16500205-16500224 | Msa0492640:CDS | 40.0% | |
ATCATGGCAGCAATATTCAC+CGG | - | chr3_4:16500581-16500600 | None:intergenic | 40.0% | |
GACAAAGGATATCGCTATCA+TGG | - | chr3_4:16500597-16500616 | None:intergenic | 40.0% | |
GACAGGGAAATATCTCTAGA+GGG | + | chr3_4:16500884-16500903 | Msa0492640:intron | 40.0% | |
AAAACCAGCAAGTATCAGAG+TGG | + | chr3_4:16500937-16500956 | Msa0492640:intron | 40.0% | |
AACTATGAGCAACGATCCAA+TGG | - | chr3_4:16501488-16501507 | None:intergenic | 40.0% | |
TATATGCAACGCAAGTTCAG+CGG | + | chr3_4:16501642-16501661 | Msa0492640:intron | 40.0% | |
CCATGTTTGTAAACTACAGG+AGG | - | chr3_4:16502007-16502026 | None:intergenic | 40.0% | |
CCTCCTGTAGTTTACAAACA+TGG | + | chr3_4:16502004-16502023 | Msa0492640:intron | 40.0% | |
AGCCCATGTTTGTAAACTAC+AGG | - | chr3_4:16502010-16502029 | None:intergenic | 40.0% | |
AGCACTAATAATCTGCTCCT+TGG | - | chr3_4:16502036-16502055 | None:intergenic | 40.0% | |
CATATATGACCAGATCCCAA+AGG | + | chr3_4:16502273-16502292 | Msa0492640:intron | 40.0% | |
ATGGCAAAAGGTGGAATATC+AGG | - | chr3_4:16502366-16502385 | None:intergenic | 40.0% | |
CTCACACAATTCGTAGTTAC+TGG | - | chr3_4:16502648-16502667 | None:intergenic | 40.0% | |
GTGAGTCTACGATACTATGT+AGG | + | chr3_4:16502663-16502682 | Msa0492640:intron | 40.0% | |
TGAAAACTCGTTGCACACTT+GGG | + | chr3_4:16502705-16502724 | Msa0492640:intron | 40.0% | |
! | ATAAGGGTTTGTTCGAGGAA+GGG | - | chr3_4:16502879-16502898 | None:intergenic | 40.0% |
! | AATAAGGGTTTGTTCGAGGA+AGG | - | chr3_4:16502880-16502899 | None:intergenic | 40.0% |
! | AAGGAATAAGGGTTTGTTCG+AGG | - | chr3_4:16502884-16502903 | None:intergenic | 40.0% |
TTTACACTGAGACTCAGACT+GGG | - | chr3_4:16502951-16502970 | None:intergenic | 40.0% | |
TCTGAGTCTCAGTGTAAACA+TGG | + | chr3_4:16502953-16502972 | Msa0492640:intron | 40.0% | |
CATGTTGAGACACTAGTTCA+TGG | - | chr3_4:16502984-16503003 | None:intergenic | 40.0% | |
CGGGAAAAAGGAAAAAGCAA+AGG | - | chr3_4:16503144-16503163 | None:intergenic | 40.0% | |
AAGAGTTACACAATGGTTGC+GGG | - | chr3_4:16503163-16503182 | None:intergenic | 40.0% | |
GCAATATGTGAAACTGGTCA+TGG | + | chr3_4:16503338-16503357 | Msa0492640:intron | 40.0% | |
AATACCCTACCTATTCCTTG+AGG | - | chr3_4:16503365-16503384 | None:intergenic | 40.0% | |
! | AATTAGGTCTGGCATTGAGT+GGG | + | chr3_4:16503390-16503409 | Msa0492640:intron | 40.0% |
TTGTCCTGGCGAATATCTTA+GGG | + | chr3_4:16504041-16504060 | Msa0492640:intron | 40.0% | |
!! | TGAATGGCCTTTTTCACTCA+AGG | + | chr3_4:16504226-16504245 | Msa0492640:intron | 40.0% |
CTATCTCTGTCCCCAAATAT+AGG | + | chr3_4:16504330-16504349 | Msa0492640:intron | 40.0% | |
! | GGACACCATTGACTAAATCA+CGG | + | chr3_4:16504351-16504370 | Msa0492640:intron | 40.0% |
AGTCCTATATTTAGGGATGG+AGG | + | chr3_4:16504596-16504615 | Msa0492640:intron | 40.0% | |
! | GTTGTTTCAGATCACGATCT+AGG | + | chr3_4:16504709-16504728 | Msa0492640:intron | 40.0% |
TCTTGGCAGTGAATATGTGT+TGG | + | chr3_4:16505433-16505452 | Msa0492640:CDS | 40.0% | |
AATTAGGGATAACCGCTACA+AGG | + | chr3_4:16505499-16505518 | Msa0492640:CDS | 40.0% | |
GGATCAGAAGTTAAGACTTG+TGG | + | chr3_4:16505520-16505539 | Msa0492640:CDS | 40.0% | |
GTAGTGAAGAAGCCATTCAT+TGG | - | chr3_4:16505918-16505937 | None:intergenic | 40.0% | |
GCACATTATTTGCACTTTGC+AGG | + | chr3_4:16506062-16506081 | Msa0492640:intron | 40.0% | |
TCAGCAGCTTCAGAAGAATT+TGG | - | chr3_4:16506236-16506255 | None:intergenic | 40.0% | |
TCGTTTACGAGAGGAACATA+GGG | - | chr3_4:16506512-16506531 | None:intergenic | 40.0% | |
TGGAGTGATAACTGATAAGG+TGG | - | chr3_4:16506540-16506559 | None:intergenic | 40.0% | |
CTATGTGTCTTCGACAAACA+AGG | - | chr3_4:16506724-16506743 | None:intergenic | 40.0% | |
TGTTGTAAAACAGCTGCACA+TGG | - | chr3_4:16506825-16506844 | None:intergenic | 40.0% | |
! | TTACAACAGAGATTCTGGAG+GGG | + | chr3_4:16506837-16506856 | Msa0492640:CDS | 40.0% |
TTTGACGTACAGAGAACAAG+TGG | + | chr3_4:16506860-16506879 | Msa0492640:CDS | 40.0% | |
ATTTGCCATCCAACTTATGC+AGG | + | chr3_4:16507048-16507067 | Msa0492640:CDS | 40.0% | |
! | TAGTACCTGCATAAGTTGGA+TGG | - | chr3_4:16507056-16507075 | None:intergenic | 40.0% |
ATACAAATCCAACACAGCCA+TGG | - | chr3_4:16507380-16507399 | None:intergenic | 40.0% | |
! | GGTAAACTTAGAGGTATGAG+TGG | - | chr3_4:16507677-16507696 | None:intergenic | 40.0% |
ATTGGTGTGGGTAAACTTAG+AGG | - | chr3_4:16507686-16507705 | None:intergenic | 40.0% | |
!! | TCTTTGAAGCATCTGCTCTT+GGG | - | chr3_4:16507741-16507760 | None:intergenic | 40.0% |
TGATCAATGGATCTGCTAGT+AGG | + | chr3_4:16507774-16507793 | Msa0492640:CDS | 40.0% | |
!! | GGAACATTTTCCAGCTTGTT+TGG | + | chr3_4:16507795-16507814 | Msa0492640:CDS | 40.0% |
TATGCCAATCCACCAAGTAA+AGG | + | chr3_4:16507858-16507877 | Msa0492640:three_prime_UTR | 40.0% | |
! | TTCACCTTTACTTGGTGGAT+TGG | - | chr3_4:16507865-16507884 | None:intergenic | 40.0% |
TGGTATTCACCTTTACTTGG+TGG | - | chr3_4:16507870-16507889 | None:intergenic | 40.0% | |
TTGTTCATACTGAGCAGGAT+TGG | + | chr3_4:16508023-16508042 | Msa0492640:three_prime_UTR | 40.0% | |
!! | GGTTCGGAATTTGTTAGGGT+TGG | - | chr3_4:16498114-16498133 | None:intergenic | 45.0% |
! | GGTAGGGTTCGGAATTTGTT+AGG | - | chr3_4:16498119-16498138 | None:intergenic | 45.0% |
CGACGTTCATGAAGAACAAG+TGG | + | chr3_4:16498188-16498207 | Msa0492640:CDS | 45.0% | |
! | AGTTGGTTTAGTTGGTCCGT+TGG | + | chr3_4:16498530-16498549 | Msa0492640:intron | 45.0% |
! | TTTAGTTGGTCCGTTGGTGA+GGG | + | chr3_4:16498536-16498555 | Msa0492640:intron | 45.0% |
TTGGTTACTTAGAGCTTGCC+CGG | - | chr3_4:16498655-16498674 | None:intergenic | 45.0% | |
AGAATGGAGGTTCGTTCAGT+TGG | + | chr3_4:16498720-16498739 | Msa0492640:intron | 45.0% | |
TCAACACTCTTTCAGCCTTG+AGG | + | chr3_4:16498836-16498855 | Msa0492640:intron | 45.0% | |
ACCCATATCTCTTAAGGGTG+TGG | + | chr3_4:16498966-16498985 | Msa0492640:intron | 45.0% | |
CCCACACCCTTAAGAGATAT+GGG | - | chr3_4:16498970-16498989 | None:intergenic | 45.0% | |
! | CCCATATCTCTTAAGGGTGT+GGG | + | chr3_4:16498967-16498986 | Msa0492640:intron | 45.0% |
ACCCACACCCTTAAGAGATA+TGG | - | chr3_4:16498971-16498990 | None:intergenic | 45.0% | |
! | AGACCTCTTTAGTGGGTGAT+CGG | + | chr3_4:16499007-16499026 | Msa0492640:intron | 45.0% |
TTACCGATCACCCACTAAAG+AGG | - | chr3_4:16499013-16499032 | None:intergenic | 45.0% | |
! | GAATTGTTTGGAAGGGGTGT+GGG | + | chr3_4:16499590-16499609 | Msa0492640:intron | 45.0% |
! | AATTGTTTGGAAGGGGTGTG+GGG | + | chr3_4:16499591-16499610 | Msa0492640:intron | 45.0% |
GTGTGGGGAAAATGATGTTG+AGG | + | chr3_4:16499606-16499625 | Msa0492640:CDS | 45.0% | |
!!! | GGTTTTTTTGGGACTGCTTC+TGG | + | chr3_4:16499638-16499657 | Msa0492640:CDS | 45.0% |
!!! | TTTTTTGGGACTGCTTCTGG+AGG | + | chr3_4:16499641-16499660 | Msa0492640:CDS | 45.0% |
!! | CCCTTTTTGGTCAAGTCATC+TGG | - | chr3_4:16499674-16499693 | None:intergenic | 45.0% |
! | TTGACCAAAAAGGGTATGCC+TGG | + | chr3_4:16499680-16499699 | Msa0492640:intron | 45.0% |
! | TGACCAAAAAGGGTATGCCT+GGG | + | chr3_4:16499681-16499700 | Msa0492640:intron | 45.0% |
TATGCCTCAAAGGAACTCTG+TGG | + | chr3_4:16499827-16499846 | Msa0492640:CDS | 45.0% | |
TTCAGGCCAGAAAAAGGGAA+AGG | + | chr3_4:16500196-16500215 | Msa0492640:intron | 45.0% | |
ACATTTCGGAAGTTCTCCAC+AGG | + | chr3_4:16500228-16500247 | Msa0492640:CDS | 45.0% | |
AAGGAGGTTCTCTTCACAAG+TGG | - | chr3_4:16500421-16500440 | None:intergenic | 45.0% | |
TTGAAAGGGGTCCTGCAAAA+AGG | + | chr3_4:16500861-16500880 | Msa0492640:intron | 45.0% | |
TGAAAGGGGTCCTGCAAAAA+GGG | + | chr3_4:16500862-16500881 | Msa0492640:intron | 45.0% | |
! | ATTTCCCTGTCCCTTTTTGC+AGG | - | chr3_4:16500875-16500894 | None:intergenic | 45.0% |
GGACAGGGAAATATCTCTAG+AGG | + | chr3_4:16500883-16500902 | Msa0492640:intron | 45.0% | |
AGAACCACTCTGATACTTGC+TGG | - | chr3_4:16500944-16500963 | None:intergenic | 45.0% | |
AGGTACATGCTAACCGAAGA+AGG | + | chr3_4:16501077-16501096 | Msa0492640:intron | 45.0% | |
CATGCTAACCGAAGAAGGTA+AGG | + | chr3_4:16501082-16501101 | Msa0492640:CDS | 45.0% | |
! | TGCTGCTTCCTTACCTTCTT+CGG | - | chr3_4:16501093-16501112 | None:intergenic | 45.0% |
! | ATCTGGAATGGCAGAATCTC+TGG | + | chr3_4:16501130-16501149 | Msa0492640:CDS | 45.0% |
! | GGCTTCTTTTGGCGATTCAA+TGG | - | chr3_4:16501254-16501273 | None:intergenic | 45.0% |
! | GAACATCCAGTGGCTTCTTT+TGG | - | chr3_4:16501265-16501284 | None:intergenic | 45.0% |
GAATCAAGAGGAACATCCAG+TGG | - | chr3_4:16501275-16501294 | None:intergenic | 45.0% | |
TTCCTCTTGATTCCCTTGAG+AGG | + | chr3_4:16501282-16501301 | Msa0492640:CDS | 45.0% | |
TCCTCTTGATTCCCTTGAGA+GGG | + | chr3_4:16501283-16501302 | Msa0492640:CDS | 45.0% | |
! | TACAAACATGGGCTACTCCA+AGG | + | chr3_4:16502016-16502035 | Msa0492640:CDS | 45.0% |
CTTAGAGAGGAGCAAGTCTA+TGG | + | chr3_4:16502125-16502144 | Msa0492640:CDS | 45.0% | |
! | TTCTGCTCTGTTTTCCAACG+GGG | - | chr3_4:16502299-16502318 | None:intergenic | 45.0% |
! | GTTCTGCTCTGTTTTCCAAC+GGG | - | chr3_4:16502300-16502319 | None:intergenic | 45.0% |
! | GGTTCTGCTCTGTTTTCCAA+CGG | - | chr3_4:16502301-16502320 | None:intergenic | 45.0% |
AGAACCCTGAGTTCATCCTT+TGG | + | chr3_4:16502315-16502334 | Msa0492640:CDS | 45.0% | |
TTCATCCTTTGGTGGGAATG+TGG | + | chr3_4:16502326-16502345 | Msa0492640:CDS | 45.0% | |
GAATGGTACTTAGTGGTCAG+TGG | - | chr3_4:16502532-16502551 | None:intergenic | 45.0% | |
! | CAAGTGTGCAACGAGTTTTC+AGG | - | chr3_4:16502706-16502725 | None:intergenic | 45.0% |
CTGAAAACTCGTTGCACACT+TGG | + | chr3_4:16502704-16502723 | Msa0492640:intron | 45.0% | |
AGGAAGGGAAGGTTGTTTAG+AGG | - | chr3_4:16502864-16502883 | None:intergenic | 45.0% | |
GTTTACACTGAGACTCAGAC+TGG | - | chr3_4:16502952-16502971 | None:intergenic | 45.0% | |
AAAGAAGCGGCAAGATAGAG+TGG | - | chr3_4:16503102-16503121 | None:intergenic | 45.0% | |
AGCCTCACACTAGAAAGAAG+CGG | - | chr3_4:16503115-16503134 | None:intergenic | 45.0% | |
ACACAATGGTTGCGGGAAAA+AGG | - | chr3_4:16503156-16503175 | None:intergenic | 45.0% | |
ATGGTCCTCAAGGAATAGGT+AGG | + | chr3_4:16503357-16503376 | Msa0492640:intron | 45.0% | |
TGGTCCTCAAGGAATAGGTA+GGG | + | chr3_4:16503358-16503377 | Msa0492640:intron | 45.0% | |
! | AGGAATAGGTAGGGTATTCC+TGG | + | chr3_4:16503367-16503386 | Msa0492640:intron | 45.0% |
! | GGTAGGGTATTCCTGGAATT+AGG | + | chr3_4:16503374-16503393 | Msa0492640:intron | 45.0% |
GGTATTCCTGGAATTAGGTC+TGG | + | chr3_4:16503379-16503398 | Msa0492640:intron | 45.0% | |
TCAATGCCAGACCTAATTCC+AGG | - | chr3_4:16503388-16503407 | None:intergenic | 45.0% | |
! | GAATTAGGTCTGGCATTGAG+TGG | + | chr3_4:16503389-16503408 | Msa0492640:intron | 45.0% |
ACTGCACTTTACACTCACCA+TGG | + | chr3_4:16503581-16503600 | Msa0492640:intron | 45.0% | |
CTTGTCCTGGCGAATATCTT+AGG | + | chr3_4:16504040-16504059 | Msa0492640:intron | 45.0% | |
GTTACCCTAAGATATTCGCC+AGG | - | chr3_4:16504048-16504067 | None:intergenic | 45.0% | |
!! | TCGGGAGCAATTTGCTACTA+AGG | + | chr3_4:16504187-16504206 | Msa0492640:CDS | 45.0% |
!! | CGGGAGCAATTTGCTACTAA+GGG | + | chr3_4:16504188-16504207 | Msa0492640:CDS | 45.0% |
!! | GGGAGCAATTTGCTACTAAG+GGG | + | chr3_4:16504189-16504208 | Msa0492640:CDS | 45.0% |
CTGCCTCCATCCCTAAATAT+AGG | - | chr3_4:16504602-16504621 | None:intergenic | 45.0% | |
CTATATTTAGGGATGGAGGC+AGG | + | chr3_4:16504600-16504619 | Msa0492640:intron | 45.0% | |
CATTTATGCAGTGGACCACA+GGG | - | chr3_4:16505075-16505094 | None:intergenic | 45.0% | |
TCATTTATGCAGTGGACCAC+AGG | - | chr3_4:16505076-16505095 | None:intergenic | 45.0% | |
ATCCAAATCCCATCTCCAAC+AGG | - | chr3_4:16505398-16505417 | None:intergenic | 45.0% | |
TTGCCATTCAATGTCATCGG+TGG | + | chr3_4:16506007-16506026 | Msa0492640:intron | 45.0% | |
TAGCCACCGATGACATTGAA+TGG | - | chr3_4:16506013-16506032 | None:intergenic | 45.0% | |
!! | TTGGAGTAAGGGTGTCATGA+TGG | - | chr3_4:16506488-16506507 | None:intergenic | 45.0% |
GAACATAGGGGTTGGAGTAA+GGG | - | chr3_4:16506499-16506518 | None:intergenic | 45.0% | |
CGTTTACGAGAGGAACATAG+GGG | - | chr3_4:16506511-16506530 | None:intergenic | 45.0% | |
GTCGTTTACGAGAGGAACAT+AGG | - | chr3_4:16506513-16506532 | None:intergenic | 45.0% | |
TTCTGGCGCGTTCTTTCATT+AGG | + | chr3_4:16506611-16506630 | Msa0492640:intron | 45.0% | |
GTACAGAGAACAAGTGGCTT+AGG | + | chr3_4:16506866-16506885 | Msa0492640:CDS | 45.0% | |
CAATCTCCTCTGTAACCTGT+GGG | - | chr3_4:16507357-16507376 | None:intergenic | 45.0% | |
!! | GTCTTTGAAGCATCTGCTCT+TGG | - | chr3_4:16507742-16507761 | None:intergenic | 45.0% |
!!! | ATTTTGAAAATTATTAAAAT+GGG | + | chr3_4:16502503-16502522 | Msa0492640:intron | 5.0% |
!!! | GTAATTTTATTTTATTTTTT+TGG | - | chr3_4:16506426-16506445 | None:intergenic | 5.0% |
TGAAAAACCGAAACCCAGCG+CGG | + | chr3_4:16498030-16498049 | Msa0492640:five_prime_UTR | 50.0% | |
AGAAGAAATCATGCCGCGCT+GGG | - | chr3_4:16498046-16498065 | None:intergenic | 50.0% | |
TAGAAGAAATCATGCCGCGC+TGG | - | chr3_4:16498047-16498066 | None:intergenic | 50.0% | |
AATTCCGAACCCTACCGGAA+TGG | + | chr3_4:16498123-16498142 | Msa0492640:exon | 50.0% | |
TTCTCCATTCCGGTAGGGTT+CGG | - | chr3_4:16498130-16498149 | None:intergenic | 50.0% | |
ACCCTACCGGAATGGAGAAT+CGG | + | chr3_4:16498131-16498150 | Msa0492640:exon | 50.0% | |
TCCGATTCTCCATTCCGGTA+GGG | - | chr3_4:16498135-16498154 | None:intergenic | 50.0% | |
! | GTCGCTAGTTCTTCGTTCTC+CGG | - | chr3_4:16498172-16498191 | None:intergenic | 50.0% |
GAAATGGCTGAGTCACCGAA+AGG | + | chr3_4:16498214-16498233 | Msa0492640:CDS | 50.0% | |
GTTTAGTTGGTCCGTTGGTG+AGG | + | chr3_4:16498535-16498554 | Msa0492640:intron | 50.0% | |
GGCGCGATGACCAATTTAGT+GGG | + | chr3_4:16498581-16498600 | Msa0492640:intron | 50.0% | |
GCGATGACCAATTTAGTGGG+TGG | + | chr3_4:16498584-16498603 | Msa0492640:intron | 50.0% | |
TGGTTACTTAGAGCTTGCCC+GGG | - | chr3_4:16498654-16498673 | None:intergenic | 50.0% | |
ACCCATATCTTGTAAGGGCG+TGG | + | chr3_4:16498751-16498770 | Msa0492640:intron | 50.0% | |
CCCACGCCCTTACAAGATAT+GGG | - | chr3_4:16498755-16498774 | None:intergenic | 50.0% | |
! | CCCATATCTTGTAAGGGCGT+GGG | + | chr3_4:16498752-16498771 | Msa0492640:intron | 50.0% |
ACCCACGCCCTTACAAGATA+TGG | - | chr3_4:16498756-16498775 | None:intergenic | 50.0% | |
CAGAGTCAAGGAAGACCTCA+AGG | - | chr3_4:16498854-16498873 | None:intergenic | 50.0% | |
! | GCAATGGAGGTTGGTTCAGT+TGG | + | chr3_4:16498933-16498952 | Msa0492640:intron | 50.0% |
TACGCTTGAAGCTTGCCTTG+AGG | + | chr3_4:16499050-16499069 | Msa0492640:intron | 50.0% | |
GGAATTGTTTGGAAGGGGTG+TGG | + | chr3_4:16499589-16499608 | Msa0492640:intron | 50.0% | |
! | GACCAAAAAGGGTATGCCTG+GGG | + | chr3_4:16499682-16499701 | Msa0492640:intron | 50.0% |
!! | CCTTTGAGGCATATAGCGCT+TGG | - | chr3_4:16499820-16499839 | None:intergenic | 50.0% |
CCAAGCGCTATATGCCTCAA+AGG | + | chr3_4:16499817-16499836 | Msa0492640:CDS | 50.0% | |
TACGCCACAGAGTTCCTTTG+AGG | - | chr3_4:16499834-16499853 | None:intergenic | 50.0% | |
TCGGAAGTTCTCCACAGGAT+TGG | + | chr3_4:16500233-16500252 | Msa0492640:CDS | 50.0% | |
! | TCTCCACAGGATTGGTACAG+TGG | + | chr3_4:16500241-16500260 | Msa0492640:CDS | 50.0% |
CATCCACTGTACCAATCCTG+TGG | - | chr3_4:16500247-16500266 | None:intergenic | 50.0% | |
! | CACAGGATTGGTACAGTGGA+TGG | + | chr3_4:16500245-16500264 | Msa0492640:CDS | 50.0% |
TCAAGCTGCCCAGCAAAGTA+TGG | + | chr3_4:16500310-16500329 | Msa0492640:intron | 50.0% | |
GGCAGAATCTCTGGACAAGT+CGG | + | chr3_4:16501139-16501158 | Msa0492640:CDS | 50.0% | |
GAATCGCCAAAAGAAGCCAC+TGG | + | chr3_4:16501256-16501275 | Msa0492640:CDS | 50.0% | |
ACCCTCTCAAGGGAATCAAG+AGG | - | chr3_4:16501287-16501306 | None:intergenic | 50.0% | |
! | GAGGAAGCATACCCTCTCAA+GGG | - | chr3_4:16501297-16501316 | None:intergenic | 50.0% |
! | AGAGGAAGCATACCCTCTCA+AGG | - | chr3_4:16501298-16501317 | None:intergenic | 50.0% |
AGATGTCTCATCTCTGTGGC+CGG | + | chr3_4:16502088-16502107 | Msa0492640:CDS | 50.0% | |
! | TGTTTTCCAACGGGGCCTTT+GGG | - | chr3_4:16502291-16502310 | None:intergenic | 50.0% |
ACCCTGAGTTCATCCTTTGG+TGG | + | chr3_4:16502318-16502337 | Msa0492640:CDS | 50.0% | |
CCCACCAAAGGATGAACTCA+GGG | - | chr3_4:16502322-16502341 | None:intergenic | 50.0% | |
CCCTGAGTTCATCCTTTGGT+GGG | + | chr3_4:16502319-16502338 | Msa0492640:CDS | 50.0% | |
TCCCACCAAAGGATGAACTC+AGG | - | chr3_4:16502323-16502342 | None:intergenic | 50.0% | |
CAAGCTCTCATGGCAAAAGG+TGG | - | chr3_4:16502375-16502394 | None:intergenic | 50.0% | |
GAGCAAGCTCTCATGGCAAA+AGG | - | chr3_4:16502378-16502397 | None:intergenic | 50.0% | |
AGCTGATGAGCAAGCTCTCA+TGG | - | chr3_4:16502385-16502404 | None:intergenic | 50.0% | |
! | GAGCTTGCTCATCAGCTGTA+TGG | + | chr3_4:16502388-16502407 | Msa0492640:intron | 50.0% |
TGTTTAGAGGTCAGAGCAGC+TGG | - | chr3_4:16502851-16502870 | None:intergenic | 50.0% | |
CTGTTGGAGGTAGGGAATGT+GGG | - | chr3_4:16502926-16502945 | None:intergenic | 50.0% | |
TCTGTTGGAGGTAGGGAATG+TGG | - | chr3_4:16502927-16502946 | None:intergenic | 50.0% | |
ACTGGGATCTGTTGGAGGTA+GGG | - | chr3_4:16502934-16502953 | None:intergenic | 50.0% | |
AGACTCAGACTGGGATCTGT+TGG | - | chr3_4:16502942-16502961 | None:intergenic | 50.0% | |
GCAGTTTGTGACTGGGTTCA+TGG | - | chr3_4:16503067-16503086 | None:intergenic | 50.0% | |
CCAGTGTGCAGTTTGTGACT+GGG | - | chr3_4:16503074-16503093 | None:intergenic | 50.0% | |
TCCAGTGTGCAGTTTGTGAC+TGG | - | chr3_4:16503075-16503094 | None:intergenic | 50.0% | |
! | TGCCGCTTCTTTCTAGTGTG+AGG | + | chr3_4:16503110-16503129 | Msa0492640:intron | 50.0% |
GAAACTGGTCATGGTCCTCA+AGG | + | chr3_4:16503347-16503366 | Msa0492640:intron | 50.0% | |
GGTCATGGTCCTCAAGGAAT+AGG | + | chr3_4:16503353-16503372 | Msa0492640:intron | 50.0% | |
TGGAAGGGAGGCGATTATGA+TGG | + | chr3_4:16503834-16503853 | Msa0492640:intron | 50.0% | |
AGTGTGCCACCATTGAGCTT+TGG | + | chr3_4:16504119-16504138 | Msa0492640:CDS | 50.0% | |
GTGTGCCACCATTGAGCTTT+GGG | + | chr3_4:16504120-16504139 | Msa0492640:CDS | 50.0% | |
TGTGCCACCATTGAGCTTTG+GGG | + | chr3_4:16504121-16504140 | Msa0492640:CDS | 50.0% | |
AACCTCTCCCCAAAGCTCAA+TGG | - | chr3_4:16504131-16504150 | None:intergenic | 50.0% | |
TGCCTGTTGGAGATGGGATT+TGG | + | chr3_4:16505393-16505412 | Msa0492640:CDS | 50.0% | |
ATCGCGCGCCATAAAACTCT+TGG | + | chr3_4:16505416-16505435 | Msa0492640:CDS | 50.0% | |
GGAACATAGGGGTTGGAGTA+AGG | - | chr3_4:16506500-16506519 | None:intergenic | 50.0% | |
TACGAGAGGAACATAGGGGT+TGG | - | chr3_4:16506507-16506526 | None:intergenic | 50.0% | |
!! | GTGGCTTTGTCGTTTACGAG+AGG | - | chr3_4:16506521-16506540 | None:intergenic | 50.0% |
GCTTGAGTTAAGCTTCCCTC+TGG | + | chr3_4:16506680-16506699 | Msa0492640:intron | 50.0% | |
GTAAAACAGCTGCACATGGC+CGG | - | chr3_4:16506821-16506840 | None:intergenic | 50.0% | |
GGTGACACCCTAAGGAAGTA+TGG | + | chr3_4:16506887-16506906 | Msa0492640:CDS | 50.0% | |
CTCATAAATGCAGGTCCCAC+AGG | + | chr3_4:16507339-16507358 | Msa0492640:intron | 50.0% | |
GCAATCTCCTCTGTAACCTG+TGG | - | chr3_4:16507358-16507377 | None:intergenic | 50.0% | |
GGTTACAGAGGAGATTGCCA+TGG | + | chr3_4:16507360-16507379 | Msa0492640:CDS | 50.0% | |
TCACAAGCAGTGAGTAGGCA+CGG | - | chr3_4:16507423-16507442 | None:intergenic | 50.0% | |
AGGACTCACAAGCAGTGAGT+AGG | - | chr3_4:16507428-16507447 | None:intergenic | 50.0% | |
ATCAGCTACCCCAAACAAGC+TGG | - | chr3_4:16507808-16507827 | None:intergenic | 50.0% | |
AATCATGCCGCGCTGGGTTT+CGG | - | chr3_4:16498040-16498059 | None:intergenic | 55.0% | |
GTCCGATTCTCCATTCCGGT+AGG | - | chr3_4:16498136-16498155 | None:intergenic | 55.0% | |
TGAACCCACACCCTCACCAA+CGG | - | chr3_4:16498549-16498568 | None:intergenic | 55.0% | |
CGGCGCGATGACCAATTTAG+TGG | + | chr3_4:16498580-16498599 | Msa0492640:intron | 55.0% | |
CACTAAAGAGGTCCTCGCAC+CGG | - | chr3_4:16498799-16498818 | None:intergenic | 55.0% | |
GGTGCGAGGACCTCTTTAGT+GGG | + | chr3_4:16498798-16498817 | Msa0492640:intron | 55.0% | |
CTGGGAACTCGTCAGAGTCA+AGG | - | chr3_4:16498866-16498885 | None:intergenic | 55.0% | |
AGCTTGCCTTGAGGAGCTGA+TGG | + | chr3_4:16499059-16499078 | Msa0492640:intron | 55.0% | |
GCTTGCCTTGAGGAGCTGAT+GGG | + | chr3_4:16499060-16499079 | Msa0492640:intron | 55.0% | |
! | AGCCCCAGGCATACCCTTTT+TGG | - | chr3_4:16499687-16499706 | None:intergenic | 55.0% |
ATCGATGCTGCTGAAGCCAG+TGG | + | chr3_4:16500056-16500075 | Msa0492640:CDS | 55.0% | |
TCGATGCTGCTGAAGCCAGT+GGG | + | chr3_4:16500057-16500076 | Msa0492640:CDS | 55.0% | |
TGGTGCTCGAGATAACCCAC+TGG | - | chr3_4:16500075-16500094 | None:intergenic | 55.0% | |
GGGTCCTGCAAAAAGGGACA+GGG | + | chr3_4:16500868-16500887 | Msa0492640:intron | 55.0% | |
ATGCAACGCAAGTTCAGCGG+AGG | + | chr3_4:16501645-16501664 | Msa0492640:intron | 55.0% | |
! | CTGTTTTCCAACGGGGCCTT+TGG | - | chr3_4:16502292-16502311 | None:intergenic | 55.0% |
GTTCGCCACATTCCCACCAA+AGG | - | chr3_4:16502334-16502353 | None:intergenic | 55.0% | |
! | GGGTTTGTTCGAGGAAGGGA+AGG | - | chr3_4:16502875-16502894 | None:intergenic | 55.0% |
GACTGGGATCTGTTGGAGGT+AGG | - | chr3_4:16502935-16502954 | None:intergenic | 55.0% | |
CTCAGACTGGGATCTGTTGG+AGG | - | chr3_4:16502939-16502958 | None:intergenic | 55.0% | |
CCCAGTCACAAACTGCACAC+TGG | + | chr3_4:16503071-16503090 | Msa0492640:intron | 55.0% | |
CTCTCCCCAAAGCTCAATGG+TGG | - | chr3_4:16504128-16504147 | None:intergenic | 55.0% | |
!! | CACCATTGAGCTTTGGGGAG+AGG | + | chr3_4:16504126-16504145 | Msa0492640:CDS | 55.0% |
GTGGCTTAGGTGACACCCTA+AGG | + | chr3_4:16506879-16506898 | Msa0492640:CDS | 55.0% | |
GGAGATTGCCATGGCTGTGT+TGG | + | chr3_4:16507369-16507388 | Msa0492640:CDS | 55.0% | |
CACAAGCAGTGAGTAGGCAC+GGG | - | chr3_4:16507422-16507441 | None:intergenic | 55.0% | |
CCGCGTCCGATTCTCCATTC+CGG | - | chr3_4:16498140-16498159 | None:intergenic | 60.0% | |
CCGGAATGGAGAATCGGACG+CGG | + | chr3_4:16498137-16498156 | Msa0492640:exon | 60.0% | |
CGGAATGGAGAATCGGACGC+GGG | + | chr3_4:16498138-16498157 | Msa0492640:exon | 60.0% | |
! | TTGGTCCGTTGGTGAGGGTG+TGG | + | chr3_4:16498541-16498560 | Msa0492640:intron | 60.0% |
! | TGGTCCGTTGGTGAGGGTGT+GGG | + | chr3_4:16498542-16498561 | Msa0492640:intron | 60.0% |
GTGGGTTCAACTCCCGCTGT+CGG | + | chr3_4:16498560-16498579 | Msa0492640:intron | 60.0% | |
! | ATTGGTCATCGCGCCGACAG+CGG | - | chr3_4:16498576-16498595 | None:intergenic | 60.0% |
CACTGAGACTTGCCTCGACC+CGG | + | chr3_4:16498633-16498652 | Msa0492640:intron | 60.0% | |
ACTGAGACTTGCCTCGACCC+GGG | + | chr3_4:16498634-16498653 | Msa0492640:intron | 60.0% | |
TAGATGTCACTGCCGCCTGC+CGG | + | chr3_4:16498777-16498796 | Msa0492640:intron | 60.0% | |
CGGTGCGAGGACCTCTTTAG+TGG | + | chr3_4:16498797-16498816 | Msa0492640:intron | 60.0% | |
TGGGTCCCATCAGCTCCTCA+AGG | - | chr3_4:16499068-16499087 | None:intergenic | 60.0% | |
GGGGTCCTGCAAAAAGGGAC+AGG | + | chr3_4:16500867-16500886 | Msa0492640:intron | 60.0% | |
TAGGTTCGGCGTCTGCCTGT+TGG | + | chr3_4:16505380-16505399 | Msa0492640:intron | 60.0% | |
GGCGTCTGCCTGTTGGAGAT+GGG | + | chr3_4:16505387-16505406 | Msa0492640:CDS | 60.0% | |
GCAGGTCCCACAGGTTACAG+AGG | + | chr3_4:16507348-16507367 | Msa0492640:intron | 60.0% | |
CGGGCAAGCGACACAAGTGT+GGG | - | chr3_4:16507403-16507422 | None:intergenic | 60.0% | |
ACGGGCAAGCGACACAAGTG+TGG | - | chr3_4:16507404-16507423 | None:intergenic | 60.0% | |
TCGGACGCGGGTTCGTTGTC+CGG | + | chr3_4:16498150-16498169 | Msa0492640:CDS | 65.0% | |
! | TTGGTCATCGCGCCGACAGC+GGG | - | chr3_4:16498575-16498594 | None:intergenic | 65.0% |
CTTAGAGCTTGCCCGGGTCG+AGG | - | chr3_4:16498648-16498667 | None:intergenic | 65.0% | |
! | AAAGAGGTCCTCGCACCGGC+AGG | - | chr3_4:16498795-16498814 | None:intergenic | 65.0% |
!! | CCAACGGGGCCTTTGGGATC+TGG | - | chr3_4:16502285-16502304 | None:intergenic | 65.0% |
CCAGATCCCAAAGGCCCCGT+TGG | + | chr3_4:16502282-16502301 | Msa0492640:intron | 65.0% | |
CGGCGTCTGCCTGTTGGAGA+TGG | + | chr3_4:16505386-16505405 | Msa0492640:CDS | 65.0% | |
! | GAGGTCCTCGCACCGGCAGG+CGG | - | chr3_4:16498792-16498811 | None:intergenic | 75.0% |
! | CACTGCCGCCTGCCGGTGCG+AGG | + | chr3_4:16498784-16498803 | Msa0492640:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 16498022 | 16508135 | 16498022 | ID=Msa0492640;Name=Msa0492640 |
chr3_4 | mRNA | 16498022 | 16508135 | 16498022 | ID=Msa0492640-mRNA-1;Parent=Msa0492640;Name=Msa0492640-mRNA-1;_AED=0.05;_eAED=0.05;_QI=120|1|1|1|1|1|15|309|659 |
chr3_4 | exon | 16498022 | 16498335 | 16498022 | ID=Msa0492640-mRNA-1:exon:4735;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16499604 | 16499692 | 16499604 | ID=Msa0492640-mRNA-1:exon:4736;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16499799 | 16499877 | 16499799 | ID=Msa0492640-mRNA-1:exon:4737;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16500013 | 16500099 | 16500013 | ID=Msa0492640-mRNA-1:exon:4738;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16500201 | 16500326 | 16500201 | ID=Msa0492640-mRNA-1:exon:4739;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16501079 | 16501304 | 16501079 | ID=Msa0492640-mRNA-1:exon:4740;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16502014 | 16502197 | 16502014 | ID=Msa0492640-mRNA-1:exon:4741;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16502286 | 16502404 | 16502286 | ID=Msa0492640-mRNA-1:exon:4742;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16504062 | 16504210 | 16504062 | ID=Msa0492640-mRNA-1:exon:4743;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16504719 | 16504776 | 16504719 | ID=Msa0492640-mRNA-1:exon:4744;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16505383 | 16505541 | 16505383 | ID=Msa0492640-mRNA-1:exon:4745;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16506191 | 16506270 | 16506191 | ID=Msa0492640-mRNA-1:exon:4746;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16506832 | 16507069 | 16506832 | ID=Msa0492640-mRNA-1:exon:4747;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16507352 | 16507438 | 16507352 | ID=Msa0492640-mRNA-1:exon:4748;Parent=Msa0492640-mRNA-1 |
chr3_4 | exon | 16507722 | 16508135 | 16507722 | ID=Msa0492640-mRNA-1:exon:4749;Parent=Msa0492640-mRNA-1 |
chr3_4 | five_prime_UTR | 16498022 | 16498141 | 16498022 | ID=Msa0492640-mRNA-1:five_prime_utr;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16498142 | 16498335 | 16498142 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16499604 | 16499692 | 16499604 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16499799 | 16499877 | 16499799 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16500013 | 16500099 | 16500013 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16500201 | 16500326 | 16500201 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16501079 | 16501304 | 16501079 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16502014 | 16502197 | 16502014 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16502286 | 16502404 | 16502286 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16504062 | 16504210 | 16504062 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16504719 | 16504776 | 16504719 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16505383 | 16505541 | 16505383 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16506191 | 16506270 | 16506191 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16506832 | 16507069 | 16506832 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16507352 | 16507438 | 16507352 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | CDS | 16507722 | 16507826 | 16507722 | ID=Msa0492640-mRNA-1:cds;Parent=Msa0492640-mRNA-1 |
chr3_4 | three_prime_UTR | 16507827 | 16508135 | 16507827 | ID=Msa0492640-mRNA-1:three_prime_utr;Parent=Msa0492640-mRNA-1 |
Gene Sequence |
Protein sequence |