AlfalfaGEDB | Msa1333080

M. sativa cultivar zhongmu-4 / Msa1333080

KEGG: K20223
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1333080	XP_039689049.1	92.929	396	15	2	12	394	702	1097	0.0	740

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1333080	A0A396IFS0	92.929	396	15	2	12	394	702	1097	0.0	740

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa1333080	0.808066	3.717216e-50	-8.615850e-47
Msa0000510	Msa1333080	0.836176	1.090713e-56	-8.615850e-47
Msa0005890	Msa1333080	0.809304	2.021988e-50	-8.615850e-47
Msa0018160	Msa1333080	0.816413	5.601339e-52	-8.615850e-47
Msa0027280	Msa1333080	0.843242	1.580460e-58	-8.615850e-47
Msa0028420	Msa1333080	0.813294	2.752547e-51	-8.615850e-47
Msa0035340	Msa1333080	0.812012	5.250796e-51	-8.615850e-47
Msa0036870	Msa1333080	0.810555	1.087497e-50	-8.615850e-47
Msa0048510	Msa1333080	0.814080	1.848284e-51	-8.615850e-47
Msa0052260	Msa1333080	0.827998	1.147416e-54	-8.615850e-47
Msa0061290	Msa1333080	0.815135	1.079583e-51	-8.615850e-47
Msa0090400	Msa1333080	0.851858	6.749885e-61	-8.615850e-47
Msa0115080	Msa1333080	0.837834	4.114391e-57	-8.615850e-47
Msa0603380	Msa1333080	0.813510	2.467504e-51	-8.615850e-47
Msa0624900	Msa1333080	0.800966	1.124804e-48	-8.615850e-47
Msa0666700	Msa1333080	0.800850	1.187794e-48	-8.615850e-47
Msa0683470	Msa1333080	0.800146	1.652593e-48	-8.615850e-47
Msa0692740	Msa1333080	0.801205	1.005030e-48	-8.615850e-47
Msa0735780	Msa1333080	0.808624	2.827095e-50	-8.615850e-47
Msa0761670	Msa1333080	0.811332	7.383719e-51	-8.615850e-47
Msa0795870	Msa1333080	0.824190	9.229882e-54	-8.615850e-47
Msa0833650	Msa1333080	0.825610	4.266826e-54	-8.615850e-47
Msa0124060	Msa1333080	0.809499	1.836352e-50	-8.615850e-47
Msa0137880	Msa1333080	0.840849	6.787576e-58	-8.615850e-47
Msa0146040	Msa1333080	0.807347	5.285093e-50	-8.615850e-47
Msa0152350	Msa1333080	0.822472	2.325812e-53	-8.615850e-47
Msa0168500	Msa1333080	0.804174	2.452211e-49	-8.615850e-47
Msa0175750	Msa1333080	0.800534	1.377665e-48	-8.615850e-47
Msa0182190	Msa1333080	0.830580	2.711526e-55	-8.615850e-47
Msa0182240	Msa1333080	0.831341	1.763861e-55	-8.615850e-47
Msa0190570	Msa1333080	0.810406	1.171358e-50	-8.615850e-47
Msa0225860	Msa1333080	0.824444	8.046821e-54	-8.615850e-47
Msa1224930	Msa1333080	0.831864	1.311070e-55	-8.615850e-47
Msa1297230	Msa1333080	0.805933	1.050840e-49	-8.615850e-47
Msa1298220	Msa1333080	0.863792	1.932584e-64	-8.615850e-47
Msa1313990	Msa1333080	0.801290	9.653989e-49	-8.615850e-47
Msa1321340	Msa1333080	0.810015	1.422245e-50	-8.615850e-47
Msa1330410	Msa1333080	0.804901	1.729278e-49	-8.615850e-47
Msa1333080	Msa1343170	0.814936	1.194907e-51	-8.615850e-47
Msa1333080	Msa1343180	0.828345	9.464243e-55	-8.615850e-47
Msa1333080	Msa1372230	0.811843	5.716802e-51	-8.615850e-47
Msa1333080	Msa1390440	0.863874	1.822574e-64	-8.615850e-47
Msa1333080	Msa1391770	0.810478	1.129855e-50	-8.615850e-47
Msa1333080	Msa1440560	0.802767	4.799655e-49	-8.615850e-47
Msa1333080	Msa1454140	0.800322	1.521829e-48	-8.615850e-47
Msa0386090	Msa1333080	0.820056	8.391699e-53	-8.615850e-47
Msa0465410	Msa1333080	0.823213	1.563688e-53	-8.615850e-47
Msa0467490	Msa1333080	0.840096	1.067865e-57	-8.615850e-47
Msa0474520	Msa1333080	0.804575	2.022541e-49	-8.615850e-47
Msa0476650	Msa1333080	0.829587	4.734905e-55	-8.615850e-47
Msa1081390	Msa1333080	0.809626	1.724399e-50	-8.615850e-47
Msa1090140	Msa1333080	0.822543	2.239096e-53	-8.615850e-47
Msa0242590	Msa1333080	0.809168	2.161840e-50	-8.615850e-47
Msa0244640	Msa1333080	0.804073	2.573281e-49	-8.615850e-47
Msa0267110	Msa1333080	0.814241	1.702697e-51	-8.615850e-47
Msa0298470	Msa1333080	0.818580	1.819788e-52	-8.615850e-47
Msa0302640	Msa1333080	0.819693	1.015704e-52	-8.615850e-47
Msa0340500	Msa1333080	0.805852	1.092709e-49	-8.615850e-47
Msa1116220	Msa1333080	0.807769	4.298499e-50	-8.615850e-47
Msa1130230	Msa1333080	0.835926	1.262445e-56	-8.615850e-47
Msa1132840	Msa1333080	0.834398	3.067832e-56	-8.615850e-47
Msa1155170	Msa1333080	-0.821878	3.195270e-53	-8.615850e-47
Msa1162590	Msa1333080	0.811529	6.690133e-51	-8.615850e-47
Msa1171710	Msa1333080	0.815754	7.861471e-52	-8.615850e-47
Msa1177320	Msa1333080	0.801006	1.103422e-48	-8.615850e-47
Msa1186020	Msa1333080	0.814187	1.750703e-51	-8.615850e-47
Msa1206460	Msa1333080	0.862397	5.217839e-64	-8.615850e-47
Msa0492640	Msa1333080	0.801363	9.327504e-49	-8.615850e-47
Msa0495550	Msa1333080	0.810292	1.239521e-50	-8.615850e-47
Msa0511270	Msa1333080	0.830456	2.907619e-55	-8.615850e-47
Msa0520990	Msa1333080	0.814121	1.809778e-51	-8.615850e-47
Msa0530780	Msa1333080	0.831899	1.284995e-55	-8.615850e-47
Msa0580200	Msa1333080	0.807992	3.854838e-50	-8.615850e-47
Msa0580370	Msa1333080	0.829633	4.614502e-55	-8.615850e-47
Msa0583830	Msa1333080	0.800425	1.450090e-48	-8.615850e-47
Msa0915520	Msa1333080	0.830347	3.090538e-55	-8.615850e-47
Msa0945110	Msa1333080	0.808637	2.808658e-50	-8.615850e-47
Msa0968850	Msa1333080	0.803942	2.740489e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1333080	MtrunA17_Chr4g0069091	92.929	396	15	2	12	394	702	1097	0.0	740

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1333080	AT3G17340.2	47.120	382	184	5	19	385	705	1083	5.63e-90	293
Msa1333080	AT3G17340.1	47.230	379	185	5	19	385	705	1080	1.09e-89	293

Find 85 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTATACCTTCTACAATTTC+AGG	0.249830	8_4:-53103856	None:intergenic
GATTATTCACTCGAAATATC+AGG	0.267649	8_4:+53105549	Msa1333080:three_prime_UTR
AAGATGGAGGCATATCAATT+TGG	0.282646	8_4:+53103890	Msa1333080:CDS
CAAGAACTGGATATGGAATT+AGG	0.293684	8_4:+53105038	Msa1333080:CDS
AAAGAAATTGTGAATTTAGA+TGG	0.297865	8_4:+53103508	Msa1333080:CDS
GTGTTCTTCTGAATTTAATA+AGG	0.304399	8_4:+53103285	Msa1333080:CDS
AAACTGCTTCACTTCACTAA+TGG	0.340507	8_4:+53104632	Msa1333080:CDS
CGAAGATCAAGAACTGGATA+TGG	0.353329	8_4:+53105031	Msa1333080:CDS
TTGTAATTCTTTCAACTGAA+TGG	0.353975	8_4:-53104661	None:intergenic
TGAAATTGTAGAAGGTATAA+TGG	0.368284	8_4:+53103858	Msa1333080:CDS
CGTTCAATTGTAGAAGGAAT+TGG	0.369905	8_4:+53103598	Msa1333080:CDS
TCTTCTATGCATGATGAATT+CGG	0.380112	8_4:-53103328	None:intergenic
TGTTATCCTGAAATTGTAGA+AGG	0.380797	8_4:+53103850	Msa1333080:CDS
GGCAGAAGGATATTGCTTAA+TGG	0.382188	8_4:-53103638	None:intergenic
TAGAGGCTTCCAAAGGGAAC+TGG	0.388145	8_4:-53103800	None:intergenic
CGGAAGAAGAATTTCTTGAT+AGG	0.391493	8_4:+53104949	Msa1333080:CDS
TGTAGAAGGTATAATGGAAA+AGG	0.392818	8_4:+53103864	Msa1333080:CDS
CCTTCTACAATTGAACGTTC+AGG	0.402070	8_4:-53103592	None:intergenic
GGCACAGGTGGAGCTGGAGG+GGG	0.412142	8_4:-53103571	None:intergenic
CTGAATGCCTTCCCTGGGTG+TGG	0.415942	8_4:+53105461	Msa1333080:CDS
GGCTGAAGATGATGAGGATG+AGG	0.416573	8_4:+53104707	Msa1333080:CDS
TGCTAAAGCTGCCGGGGCAT+TGG	0.418419	8_4:+53104974	Msa1333080:CDS
TGTCAGAGCTGCTGTCAGTT+TGG	0.423854	8_4:+53103419	Msa1333080:CDS
AGATGGAGGCATATCAATTT+GGG	0.431380	8_4:+53103891	Msa1333080:CDS
CGTTCAGGCACAGGTGGAGC+TGG	0.441676	8_4:-53103577	None:intergenic
CCTGAACGTTCAATTGTAGA+AGG	0.443900	8_4:+53103592	Msa1333080:CDS
ATTGAGCAACTCTTGAATCA+AGG	0.444229	8_4:+53104585	Msa1333080:CDS
ACACAAATAGCACGAAGATA+TGG	0.447226	8_4:-53103830	None:intergenic
AAATGTTTGTTCCAAGGAGC+AGG	0.450670	8_4:+53105577	Msa1333080:three_prime_UTR
GAAGCGAACCCAGTTCCCTT+TGG	0.454401	8_4:+53103791	Msa1333080:CDS
AAGATTTGTCAACTTTGTTA+CGG	0.462733	8_4:+53103347	Msa1333080:CDS
AGTAGCCTCAAAAGAGCTGC+TGG	0.474345	8_4:-53103935	None:intergenic
CAGGCACAGGTGGAGCTGGA+GGG	0.475984	8_4:-53103573	None:intergenic
GTAGAAGGTATAATGGAAAA+GGG	0.476574	8_4:+53103865	Msa1333080:CDS
GGTTCAGTTATTATTGAAGA+GGG	0.478660	8_4:+53105002	Msa1333080:CDS
GAAGATATGGCAAGCAATAG+AGG	0.480052	8_4:-53103817	None:intergenic
TCAGTTTCAATTGAGTATGT+TGG	0.485998	8_4:-53103703	None:intergenic
TCTGTCATGCTATCTGTTGA+TGG	0.486195	8_4:+53103370	Msa1333080:CDS
ATGATGAATTCGGAAAATTC+TGG	0.492503	8_4:-53103318	None:intergenic
ATAATGGAAAAGGGTGAAGA+TGG	0.498545	8_4:+53103874	Msa1333080:CDS
TCAGGCACAGGTGGAGCTGG+AGG	0.500164	8_4:-53103574	None:intergenic
GATAGGTATGCTAAAGCTGC+CGG	0.508067	8_4:+53104966	Msa1333080:CDS
ATAGGTATGCTAAAGCTGCC+GGG	0.508773	8_4:+53104967	Msa1333080:CDS
ACAATTGAACGTTCAGGCAC+AGG	0.509772	8_4:-53103586	None:intergenic
ATGATGGTATTTGTCTATCA+AGG	0.509981	8_4:-53105390	None:intergenic
AGGCACAGGTGGAGCTGGAG+GGG	0.510321	8_4:-53103572	None:intergenic
TGAAGGTGTAAAGCAGTCAT+TGG	0.512410	8_4:+53103723	Msa1333080:CDS
AAAGAATTACAAGATGAGAA+AGG	0.513753	8_4:+53104672	Msa1333080:CDS
GGTTGAAGAATTTGAAGAAA+CGG	0.518646	8_4:+53104929	Msa1333080:CDS
TGAGAAAGGAGATGAAGAAG+AGG	0.526073	8_4:+53104686	Msa1333080:CDS
GGATGTCGAAGATCAAGAAC+TGG	0.532331	8_4:+53105025	Msa1333080:CDS
ATTATTCACTCGAAATATCA+GGG	0.534591	8_4:+53105550	Msa1333080:three_prime_UTR
TTCAGTTATTATTGAAGAGG+GGG	0.537554	8_4:+53105004	Msa1333080:CDS
TTGAGCAACTCTTGAATCAA+GGG	0.538482	8_4:+53104586	Msa1333080:CDS
TTTAATTGGGGAGAAGAGAA+GGG	0.544198	8_4:+53105666	Msa1333080:three_prime_UTR
CTGTCATGCTATCTGTTGAT+GGG	0.563599	8_4:+53103371	Msa1333080:CDS
AGAAGAGGCTGAAGATGATG+AGG	0.563759	8_4:+53104701	Msa1333080:CDS
GTTCAGTTATTATTGAAGAG+GGG	0.565845	8_4:+53105003	Msa1333080:CDS
TACCATCATGTGCTTATACA+AGG	0.568163	8_4:+53105404	Msa1333080:CDS
GCTGCCGGGGCATTGGAAGA+TGG	0.568216	8_4:+53104981	Msa1333080:CDS
TGGTTCAGTTATTATTGAAG+AGG	0.569142	8_4:+53105001	Msa1333080:CDS
TGATTGCAGAGTGGCATGCA+TGG	0.578337	8_4:+53103449	Msa1333080:CDS
AGAGGCTTCCAAAGGGAACT+GGG	0.578676	8_4:-53103799	None:intergenic
TGAACCATCTTCCAATGCCC+CGG	0.578708	8_4:-53104985	None:intergenic
AAACTCATGACGAGCTGCGA+CGG	0.579274	8_4:-53105437	None:intergenic
ATGGAAAAGGGTGAAGATGG+AGG	0.581403	8_4:+53103877	Msa1333080:CDS
CTGCTTCACTTCACTAATGG+AGG	0.589139	8_4:+53104635	Msa1333080:CDS
CAAGCAATAGAGGCTTCCAA+AGG	0.597557	8_4:-53103807	None:intergenic
AAGCAATAGAGGCTTCCAAA+GGG	0.601007	8_4:-53103806	None:intergenic
ACATACTCAATTGAAACTGA+AGG	0.601068	8_4:+53103706	Msa1333080:CDS
GTCCTTGTATAAGCACATGA+TGG	0.601157	8_4:-53105406	None:intergenic
CATGTGCTTATACAAGGACA+AGG	0.603007	8_4:+53105410	Msa1333080:CDS
CAAGCTCTATATGTGGCAGA+AGG	0.617895	8_4:-53103652	None:intergenic
TTGGACAATGTAGTAATGCA+TGG	0.621160	8_4:-53103684	None:intergenic
ATTGAACGTTCAGGCACAGG+TGG	0.629530	8_4:-53103583	None:intergenic
ACATGAGCAAGCTCTATATG+TGG	0.630767	8_4:-53103659	None:intergenic
GATTGCAGAGTGGCATGCAT+GGG	0.631699	8_4:+53103450	Msa1333080:CDS
ATATAAACCACACCCAGGGA+AGG	0.642312	8_4:-53105468	None:intergenic
TTGTTTAAATTAGGACTCGG+AGG	0.646414	8_4:+53104908	Msa1333080:intron
TGGAAATATAAACCACACCC+AGG	0.658235	8_4:-53105473	None:intergenic
TAGGTATGCTAAAGCTGCCG+GGG	0.663082	8_4:+53104968	Msa1333080:CDS
TTGAATCAAGGGAAGTCATG+TGG	0.667733	8_4:+53104597	Msa1333080:CDS
GGAAATATAAACCACACCCA+GGG	0.689031	8_4:-53105472	None:intergenic
TGACTCTGAAGATTACGATG+AGG	0.694385	8_4:+53104743	Msa1333080:CDS
GGTCTGCAATGATTGCAGAG+TGG	0.763171	8_4:+53103440	Msa1333080:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTAATTTATTTTTTTAAT+TGG	+	chr8_4:53105652-53105671	Msa1333080:three_prime_UTR	0.0%
!!!	ATTAATTTATTTTTTTAATT+GGG	+	chr8_4:53105653-53105672	Msa1333080:three_prime_UTR	0.0%
!!!	TATTAATTTATTTTTTTAAT+TGG	+	chr8_4:53105652-53105671	Msa1333080:three_prime_UTR	0.0%
!!!	ATTAATTTATTTTTTTAATT+GGG	+	chr8_4:53105653-53105672	Msa1333080:three_prime_UTR	0.0%
!!!	AACAAATAAAAAAATTTGTT+TGG	+	chr8_4:53104117-53104136	Msa1333080:intron	10.0%
!!!	TGTGTTTTTAATTTATTTAT+TGG	+	chr8_4:53104531-53104550	Msa1333080:intron	10.0%
!!!	GTGTTTTTAATTTATTTATT+GGG	+	chr8_4:53104532-53104551	Msa1333080:intron	10.0%
!!!	AGGTATTTTTTTTTTTTTTT+TGG	+	chr8_4:53105597-53105616	Msa1333080:three_prime_UTR	10.0%
!!!	GGTATTTTTTTTTTTTTTTT+GGG	+	chr8_4:53105598-53105617	Msa1333080:three_prime_UTR	10.0%
!!!	AACAAATAAAAAAATTTGTT+TGG	+	chr8_4:53104117-53104136	Msa1333080:intron	10.0%
!!!	TGTGTTTTTAATTTATTTAT+TGG	+	chr8_4:53104531-53104550	Msa1333080:intron	10.0%
!!!	GTGTTTTTAATTTATTTATT+GGG	+	chr8_4:53104532-53104551	Msa1333080:intron	10.0%
!!!	AGGTATTTTTTTTTTTTTTT+TGG	+	chr8_4:53105597-53105616	Msa1333080:three_prime_UTR	10.0%
!!!	GGTATTTTTTTTTTTTTTTT+GGG	+	chr8_4:53105598-53105617	Msa1333080:three_prime_UTR	10.0%
!!!	AAAACAATTTTTCTGAATAT+TGG	+	chr8_4:53104241-53104260	Msa1333080:intron	15.0%
!!!	ATTTTTTTTTTTTTTTTGGG+CGG	+	chr8_4:53105601-53105620	Msa1333080:three_prime_UTR	15.0%
!!!	AAAACAATTTTTCTGAATAT+TGG	+	chr8_4:53104241-53104260	Msa1333080:intron	15.0%
!!!	ATTTTTTTTTTTTTTTTGGG+CGG	+	chr8_4:53105601-53105620	Msa1333080:three_prime_UTR	15.0%
!!	AAAGAAATTGTGAATTTAGA+TGG	+	chr8_4:53103508-53103527	Msa1333080:CDS	20.0%
!!	AAGTACCAAATAACAAAAAT+AGG	-	chr8_4:53105074-53105093	None:intergenic	20.0%
!!!	CAATTTTATTAGTTGTATCT+TGG	+	chr8_4:53105098-53105117	Msa1333080:intron	20.0%
!!!	TTTTTTTTTTTTTTTTGGGC+GGG	+	chr8_4:53105602-53105621	Msa1333080:three_prime_UTR	20.0%
!!	AAAGAAATTGTGAATTTAGA+TGG	+	chr8_4:53103508-53103527	Msa1333080:CDS	20.0%
!!	AAGTACCAAATAACAAAAAT+AGG	-	chr8_4:53105074-53105093	None:intergenic	20.0%
!!!	CAATTTTATTAGTTGTATCT+TGG	+	chr8_4:53105098-53105117	Msa1333080:intron	20.0%
!!!	TTTTTTTTTTTTTTTTGGGC+GGG	+	chr8_4:53105602-53105621	Msa1333080:three_prime_UTR	20.0%
!	GTGTTCTTCTGAATTTAATA+AGG	+	chr8_4:53103285-53103304	Msa1333080:CDS	25.0%
!	AAGATTTGTCAACTTTGTTA+CGG	+	chr8_4:53103347-53103366	Msa1333080:CDS	25.0%
!	ATTATACCTTCTACAATTTC+AGG	-	chr8_4:53103859-53103878	None:intergenic	25.0%
!!	TGAAATTGTAGAAGGTATAA+TGG	+	chr8_4:53103858-53103877	Msa1333080:CDS	25.0%
!	AACCAAAAACTAATTCAAAC+AGG	-	chr8_4:53104043-53104062	None:intergenic	25.0%
!	AAGAATATCAGAGGTTTAAA+TGG	-	chr8_4:53104356-53104375	None:intergenic	25.0%
!	GTTAAAACATCAACTATGTA+CGG	-	chr8_4:53104478-53104497	None:intergenic	25.0%
!	TTGTAATTCTTTCAACTGAA+TGG	-	chr8_4:53104664-53104683	None:intergenic	25.0%
!	AAAGAATTACAAGATGAGAA+AGG	+	chr8_4:53104672-53104691	Msa1333080:CDS	25.0%
!	CAAATAACAAAAATAGGAGA+AGG	-	chr8_4:53105068-53105087	None:intergenic	25.0%
!!!	CTTCTCCTATTTTTGTTATT+TGG	+	chr8_4:53105066-53105085	Msa1333080:intron	25.0%
!	TTATTAGTTGTATCTTGGTT+CGG	+	chr8_4:53105103-53105122	Msa1333080:intron	25.0%
!	ATTATTCACTCGAAATATCA+GGG	+	chr8_4:53105550-53105569	Msa1333080:three_prime_UTR	25.0%
!!!	TTTTTTTTTTTTTTTGGGCG+GGG	+	chr8_4:53105603-53105622	Msa1333080:three_prime_UTR	25.0%
!	GTGTTCTTCTGAATTTAATA+AGG	+	chr8_4:53103285-53103304	Msa1333080:CDS	25.0%
!	AAGATTTGTCAACTTTGTTA+CGG	+	chr8_4:53103347-53103366	Msa1333080:CDS	25.0%
!	ATTATACCTTCTACAATTTC+AGG	-	chr8_4:53103859-53103878	None:intergenic	25.0%
!!	TGAAATTGTAGAAGGTATAA+TGG	+	chr8_4:53103858-53103877	Msa1333080:CDS	25.0%
!	AACCAAAAACTAATTCAAAC+AGG	-	chr8_4:53104043-53104062	None:intergenic	25.0%
!	AAGAATATCAGAGGTTTAAA+TGG	-	chr8_4:53104356-53104375	None:intergenic	25.0%
!	GTTAAAACATCAACTATGTA+CGG	-	chr8_4:53104478-53104497	None:intergenic	25.0%
!	TTGTAATTCTTTCAACTGAA+TGG	-	chr8_4:53104664-53104683	None:intergenic	25.0%
!	AAAGAATTACAAGATGAGAA+AGG	+	chr8_4:53104672-53104691	Msa1333080:CDS	25.0%
!	CAAATAACAAAAATAGGAGA+AGG	-	chr8_4:53105068-53105087	None:intergenic	25.0%
!!!	CTTCTCCTATTTTTGTTATT+TGG	+	chr8_4:53105066-53105085	Msa1333080:intron	25.0%
!	TTATTAGTTGTATCTTGGTT+CGG	+	chr8_4:53105103-53105122	Msa1333080:intron	25.0%
!	ATTATTCACTCGAAATATCA+GGG	+	chr8_4:53105550-53105569	Msa1333080:three_prime_UTR	25.0%
!!!	TTTTTTTTTTTTTTTGGGCG+GGG	+	chr8_4:53105603-53105622	Msa1333080:three_prime_UTR	25.0%
	ATGATGAATTCGGAAAATTC+TGG	-	chr8_4:53103321-53103340	None:intergenic	30.0%
	TCTTCTATGCATGATGAATT+CGG	-	chr8_4:53103331-53103350	None:intergenic	30.0%
	TCAGTTTCAATTGAGTATGT+TGG	-	chr8_4:53103706-53103725	None:intergenic	30.0%
	ACATACTCAATTGAAACTGA+AGG	+	chr8_4:53103706-53103725	Msa1333080:CDS	30.0%
!!!	CATTGGCTATTGTTTTTAGT+CGG	+	chr8_4:53103740-53103759	Msa1333080:CDS	30.0%
!!!	ATTGGCTATTGTTTTTAGTC+GGG	+	chr8_4:53103741-53103760	Msa1333080:CDS	30.0%
	TGTTATCCTGAAATTGTAGA+AGG	+	chr8_4:53103850-53103869	Msa1333080:CDS	30.0%
!	TGTAGAAGGTATAATGGAAA+AGG	+	chr8_4:53103864-53103883	Msa1333080:CDS	30.0%
!	GTAGAAGGTATAATGGAAAA+GGG	+	chr8_4:53103865-53103884	Msa1333080:CDS	30.0%
	CTTACCAATTAACTTCATCT+CGG	-	chr8_4:53103977-53103996	None:intergenic	30.0%
!!!	AGCCTGTTTGAATTAGTTTT+TGG	+	chr8_4:53104038-53104057	Msa1333080:intron	30.0%
!	TCTCGATTAGAATACAGTTT+TGG	+	chr8_4:53104143-53104162	Msa1333080:intron	30.0%
	ATGAAATTGAGCAGGTAAAA+GGG	-	chr8_4:53104312-53104331	None:intergenic	30.0%
	AACTATAGCAAGAATATCAG+AGG	-	chr8_4:53104365-53104384	None:intergenic	30.0%
!	TATATCTCCTTTTGTCTACA+AGG	+	chr8_4:53104817-53104836	Msa1333080:intron	30.0%
	TTTAACAGTTCTTAATCCTG+TGG	+	chr8_4:53104883-53104902	Msa1333080:intron	30.0%
	TTAACAGTTCTTAATCCTGT+GGG	+	chr8_4:53104884-53104903	Msa1333080:intron	30.0%
!	GGTTTGTTTAAATTAGGACT+CGG	+	chr8_4:53104905-53104924	Msa1333080:intron	30.0%
	GGTTGAAGAATTTGAAGAAA+CGG	+	chr8_4:53104929-53104948	Msa1333080:CDS	30.0%
	TGGTTCAGTTATTATTGAAG+AGG	+	chr8_4:53105001-53105020	Msa1333080:CDS	30.0%
	GGTTCAGTTATTATTGAAGA+GGG	+	chr8_4:53105002-53105021	Msa1333080:CDS	30.0%
	GTTCAGTTATTATTGAAGAG+GGG	+	chr8_4:53105003-53105022	Msa1333080:CDS	30.0%
	TTCAGTTATTATTGAAGAGG+GGG	+	chr8_4:53105004-53105023	Msa1333080:CDS	30.0%
!!	GTTCGGTGTAATTTAACTTA+AGG	+	chr8_4:53105120-53105139	Msa1333080:intron	30.0%
	GCTGAGAAAATGATTATGTT+TGG	+	chr8_4:53105206-53105225	Msa1333080:intron	30.0%
!	TATGTTTGGATTTTCAGTTC+CGG	+	chr8_4:53105220-53105239	Msa1333080:intron	30.0%
	ATGATGGTATTTGTCTATCA+AGG	-	chr8_4:53105393-53105412	None:intergenic	30.0%
!	AAAACAAACTTCAGTTTTGC+TGG	-	chr8_4:53105496-53105515	None:intergenic	30.0%
	GATTATTCACTCGAAATATC+AGG	+	chr8_4:53105549-53105568	Msa1333080:three_prime_UTR	30.0%
!!!	GGTTTTAAATGTTTGTTCCA+AGG	+	chr8_4:53105571-53105590	Msa1333080:three_prime_UTR	30.0%
	AAAAAAAAATACCTGCTCCT+TGG	-	chr8_4:53105591-53105610	None:intergenic	30.0%
!!!	TTTTTTTTTTTTTTGGGCGG+GGG	+	chr8_4:53105604-53105623	Msa1333080:three_prime_UTR	30.0%
	ATGATGAATTCGGAAAATTC+TGG	-	chr8_4:53103321-53103340	None:intergenic	30.0%
	TCTTCTATGCATGATGAATT+CGG	-	chr8_4:53103331-53103350	None:intergenic	30.0%
	TCAGTTTCAATTGAGTATGT+TGG	-	chr8_4:53103706-53103725	None:intergenic	30.0%
	ACATACTCAATTGAAACTGA+AGG	+	chr8_4:53103706-53103725	Msa1333080:CDS	30.0%
!!!	CATTGGCTATTGTTTTTAGT+CGG	+	chr8_4:53103740-53103759	Msa1333080:CDS	30.0%
!!!	ATTGGCTATTGTTTTTAGTC+GGG	+	chr8_4:53103741-53103760	Msa1333080:CDS	30.0%
	TGTTATCCTGAAATTGTAGA+AGG	+	chr8_4:53103850-53103869	Msa1333080:CDS	30.0%
!	TGTAGAAGGTATAATGGAAA+AGG	+	chr8_4:53103864-53103883	Msa1333080:CDS	30.0%
!	GTAGAAGGTATAATGGAAAA+GGG	+	chr8_4:53103865-53103884	Msa1333080:CDS	30.0%
	CTTACCAATTAACTTCATCT+CGG	-	chr8_4:53103977-53103996	None:intergenic	30.0%
!!!	AGCCTGTTTGAATTAGTTTT+TGG	+	chr8_4:53104038-53104057	Msa1333080:intron	30.0%
!	TCTCGATTAGAATACAGTTT+TGG	+	chr8_4:53104143-53104162	Msa1333080:intron	30.0%
	ATGAAATTGAGCAGGTAAAA+GGG	-	chr8_4:53104312-53104331	None:intergenic	30.0%
	AACTATAGCAAGAATATCAG+AGG	-	chr8_4:53104365-53104384	None:intergenic	30.0%
!	TATATCTCCTTTTGTCTACA+AGG	+	chr8_4:53104817-53104836	Msa1333080:intron	30.0%
	TTTAACAGTTCTTAATCCTG+TGG	+	chr8_4:53104883-53104902	Msa1333080:intron	30.0%
	TTAACAGTTCTTAATCCTGT+GGG	+	chr8_4:53104884-53104903	Msa1333080:intron	30.0%
!	GGTTTGTTTAAATTAGGACT+CGG	+	chr8_4:53104905-53104924	Msa1333080:intron	30.0%
	GGTTGAAGAATTTGAAGAAA+CGG	+	chr8_4:53104929-53104948	Msa1333080:CDS	30.0%
	TGGTTCAGTTATTATTGAAG+AGG	+	chr8_4:53105001-53105020	Msa1333080:CDS	30.0%
	GGTTCAGTTATTATTGAAGA+GGG	+	chr8_4:53105002-53105021	Msa1333080:CDS	30.0%
	GTTCAGTTATTATTGAAGAG+GGG	+	chr8_4:53105003-53105022	Msa1333080:CDS	30.0%
	TTCAGTTATTATTGAAGAGG+GGG	+	chr8_4:53105004-53105023	Msa1333080:CDS	30.0%
!!	GTTCGGTGTAATTTAACTTA+AGG	+	chr8_4:53105120-53105139	Msa1333080:intron	30.0%
	GCTGAGAAAATGATTATGTT+TGG	+	chr8_4:53105206-53105225	Msa1333080:intron	30.0%
!	TATGTTTGGATTTTCAGTTC+CGG	+	chr8_4:53105220-53105239	Msa1333080:intron	30.0%
	ATGATGGTATTTGTCTATCA+AGG	-	chr8_4:53105393-53105412	None:intergenic	30.0%
!	AAAACAAACTTCAGTTTTGC+TGG	-	chr8_4:53105496-53105515	None:intergenic	30.0%
	GATTATTCACTCGAAATATC+AGG	+	chr8_4:53105549-53105568	Msa1333080:three_prime_UTR	30.0%
!!!	GGTTTTAAATGTTTGTTCCA+AGG	+	chr8_4:53105571-53105590	Msa1333080:three_prime_UTR	30.0%
	AAAAAAAAATACCTGCTCCT+TGG	-	chr8_4:53105591-53105610	None:intergenic	30.0%
!!!	TTTTTTTTTTTTTTGGGCGG+GGG	+	chr8_4:53105604-53105623	Msa1333080:three_prime_UTR	30.0%
	CGTTCAATTGTAGAAGGAAT+TGG	+	chr8_4:53103598-53103617	Msa1333080:CDS	35.0%
!	AATTGGCACTTTTGTTAGTG+AGG	+	chr8_4:53103615-53103634	Msa1333080:CDS	35.0%
	TTGGACAATGTAGTAATGCA+TGG	-	chr8_4:53103687-53103706	None:intergenic	35.0%
	ACACAAATAGCACGAAGATA+TGG	-	chr8_4:53103833-53103852	None:intergenic	35.0%
!	ATAATGGAAAAGGGTGAAGA+TGG	+	chr8_4:53103874-53103893	Msa1333080:CDS	35.0%
!	AAGATGGAGGCATATCAATT+TGG	+	chr8_4:53103890-53103909	Msa1333080:CDS	35.0%
!	AGATGGAGGCATATCAATTT+GGG	+	chr8_4:53103891-53103910	Msa1333080:CDS	35.0%
	GATGAAATTGAGCAGGTAAA+AGG	-	chr8_4:53104313-53104332	None:intergenic	35.0%
	TTAGTCACATACACCTTGAT+TGG	+	chr8_4:53104422-53104441	Msa1333080:intron	35.0%
	TAGTCACATACACCTTGATT+GGG	+	chr8_4:53104423-53104442	Msa1333080:intron	35.0%
	TACGGTCAACATGAATTCAA+TGG	-	chr8_4:53104460-53104479	None:intergenic	35.0%
!!	GTGAATTTTAGTGATGACAC+TGG	+	chr8_4:53104554-53104573	Msa1333080:intron	35.0%
	ATTGAGCAACTCTTGAATCA+AGG	+	chr8_4:53104585-53104604	Msa1333080:CDS	35.0%
	TTGAGCAACTCTTGAATCAA+GGG	+	chr8_4:53104586-53104605	Msa1333080:CDS	35.0%
	AAACTGCTTCACTTCACTAA+TGG	+	chr8_4:53104632-53104651	Msa1333080:CDS	35.0%
	CCTAATTTAAACAAACCCAC+AGG	-	chr8_4:53104902-53104921	None:intergenic	35.0%
!	CCTGTGGGTTTGTTTAAATT+AGG	+	chr8_4:53104899-53104918	Msa1333080:intron	35.0%
	TTGTTTAAATTAGGACTCGG+AGG	+	chr8_4:53104908-53104927	Msa1333080:intron	35.0%
	CGGAAGAAGAATTTCTTGAT+AGG	+	chr8_4:53104949-53104968	Msa1333080:CDS	35.0%
	CAAGAACTGGATATGGAATT+AGG	+	chr8_4:53105038-53105057	Msa1333080:CDS	35.0%
	AGCAATCCTAAACTAAACCT+GGG	-	chr8_4:53105261-53105280	None:intergenic	35.0%
	AAGCAATCCTAAACTAAACC+TGG	-	chr8_4:53105262-53105281	None:intergenic	35.0%
	TACCATCATGTGCTTATACA+AGG	+	chr8_4:53105404-53105423	Msa1333080:CDS	35.0%
!!!	TTTTTTTTTTTTTGGGCGGG+GGG	+	chr8_4:53105605-53105624	Msa1333080:three_prime_UTR	35.0%
!!	TTTTAATTGGGGAGAAGAGA+AGG	+	chr8_4:53105665-53105684	Msa1333080:three_prime_UTR	35.0%
	TTTAATTGGGGAGAAGAGAA+GGG	+	chr8_4:53105666-53105685	Msa1333080:three_prime_UTR	35.0%
	CGTTCAATTGTAGAAGGAAT+TGG	+	chr8_4:53103598-53103617	Msa1333080:CDS	35.0%
!	AATTGGCACTTTTGTTAGTG+AGG	+	chr8_4:53103615-53103634	Msa1333080:CDS	35.0%
	TTGGACAATGTAGTAATGCA+TGG	-	chr8_4:53103687-53103706	None:intergenic	35.0%
	ACACAAATAGCACGAAGATA+TGG	-	chr8_4:53103833-53103852	None:intergenic	35.0%
!	ATAATGGAAAAGGGTGAAGA+TGG	+	chr8_4:53103874-53103893	Msa1333080:CDS	35.0%
!	AAGATGGAGGCATATCAATT+TGG	+	chr8_4:53103890-53103909	Msa1333080:CDS	35.0%
!	AGATGGAGGCATATCAATTT+GGG	+	chr8_4:53103891-53103910	Msa1333080:CDS	35.0%
	GATGAAATTGAGCAGGTAAA+AGG	-	chr8_4:53104313-53104332	None:intergenic	35.0%
	TTAGTCACATACACCTTGAT+TGG	+	chr8_4:53104422-53104441	Msa1333080:intron	35.0%
	TAGTCACATACACCTTGATT+GGG	+	chr8_4:53104423-53104442	Msa1333080:intron	35.0%
	TACGGTCAACATGAATTCAA+TGG	-	chr8_4:53104460-53104479	None:intergenic	35.0%
!!	GTGAATTTTAGTGATGACAC+TGG	+	chr8_4:53104554-53104573	Msa1333080:intron	35.0%
	ATTGAGCAACTCTTGAATCA+AGG	+	chr8_4:53104585-53104604	Msa1333080:CDS	35.0%
	TTGAGCAACTCTTGAATCAA+GGG	+	chr8_4:53104586-53104605	Msa1333080:CDS	35.0%
	AAACTGCTTCACTTCACTAA+TGG	+	chr8_4:53104632-53104651	Msa1333080:CDS	35.0%
	CCTAATTTAAACAAACCCAC+AGG	-	chr8_4:53104902-53104921	None:intergenic	35.0%
!	CCTGTGGGTTTGTTTAAATT+AGG	+	chr8_4:53104899-53104918	Msa1333080:intron	35.0%
	TTGTTTAAATTAGGACTCGG+AGG	+	chr8_4:53104908-53104927	Msa1333080:intron	35.0%
	CGGAAGAAGAATTTCTTGAT+AGG	+	chr8_4:53104949-53104968	Msa1333080:CDS	35.0%
	CAAGAACTGGATATGGAATT+AGG	+	chr8_4:53105038-53105057	Msa1333080:CDS	35.0%
	AGCAATCCTAAACTAAACCT+GGG	-	chr8_4:53105261-53105280	None:intergenic	35.0%
	AAGCAATCCTAAACTAAACC+TGG	-	chr8_4:53105262-53105281	None:intergenic	35.0%
	TACCATCATGTGCTTATACA+AGG	+	chr8_4:53105404-53105423	Msa1333080:CDS	35.0%
!!!	TTTTTTTTTTTTTGGGCGGG+GGG	+	chr8_4:53105605-53105624	Msa1333080:three_prime_UTR	35.0%
!!	TTTTAATTGGGGAGAAGAGA+AGG	+	chr8_4:53105665-53105684	Msa1333080:three_prime_UTR	35.0%
	TCTGTCATGCTATCTGTTGA+TGG	+	chr8_4:53103370-53103389	Msa1333080:CDS	40.0%
	CTGTCATGCTATCTGTTGAT+GGG	+	chr8_4:53103371-53103390	Msa1333080:CDS	40.0%
	CCTTCTACAATTGAACGTTC+AGG	-	chr8_4:53103595-53103614	None:intergenic	40.0%
	CCTGAACGTTCAATTGTAGA+AGG	+	chr8_4:53103592-53103611	Msa1333080:CDS	40.0%
	GGCAGAAGGATATTGCTTAA+TGG	-	chr8_4:53103641-53103660	None:intergenic	40.0%
	ACATGAGCAAGCTCTATATG+TGG	-	chr8_4:53103662-53103681	None:intergenic	40.0%
!	TGAAGGTGTAAAGCAGTCAT+TGG	+	chr8_4:53103723-53103742	Msa1333080:CDS	40.0%
	AAGCAATAGAGGCTTCCAAA+GGG	-	chr8_4:53103809-53103828	None:intergenic	40.0%
	GAAGATATGGCAAGCAATAG+AGG	-	chr8_4:53103820-53103839	None:intergenic	40.0%
	GAGTCCGAGATGAAGTTAAT+TGG	+	chr8_4:53103970-53103989	Msa1333080:intron	40.0%
!	CTTTGAGGATGAAATTGAGC+AGG	-	chr8_4:53104320-53104339	None:intergenic	40.0%
	GGCTTAACAAGAGAACTTTG+AGG	-	chr8_4:53104335-53104354	None:intergenic	40.0%
	AGTCACATACACCTTGATTG+GGG	+	chr8_4:53104424-53104443	Msa1333080:intron	40.0%
	TTGAATCAAGGGAAGTCATG+TGG	+	chr8_4:53104597-53104616	Msa1333080:CDS	40.0%
	TGAGAAAGGAGATGAAGAAG+AGG	+	chr8_4:53104686-53104705	Msa1333080:CDS	40.0%
!	TGACTCTGAAGATTACGATG+AGG	+	chr8_4:53104743-53104762	Msa1333080:CDS	40.0%
	CACAGAACCTTGTAGACAAA+AGG	-	chr8_4:53104827-53104846	None:intergenic	40.0%
	CGAAGATCAAGAACTGGATA+TGG	+	chr8_4:53105031-53105050	Msa1333080:CDS	40.0%
	TGTTGTCATGATATGCGTAC+AGG	+	chr8_4:53105329-53105348	Msa1333080:intron	40.0%
	GTCCTTGTATAAGCACATGA+TGG	-	chr8_4:53105409-53105428	None:intergenic	40.0%
	CATGTGCTTATACAAGGACA+AGG	+	chr8_4:53105410-53105429	Msa1333080:CDS	40.0%
	GGAAATATAAACCACACCCA+GGG	-	chr8_4:53105475-53105494	None:intergenic	40.0%
	TGGAAATATAAACCACACCC+AGG	-	chr8_4:53105476-53105495	None:intergenic	40.0%
	AAATGTTTGTTCCAAGGAGC+AGG	+	chr8_4:53105577-53105596	Msa1333080:three_prime_UTR	40.0%
	TCTGTCATGCTATCTGTTGA+TGG	+	chr8_4:53103370-53103389	Msa1333080:CDS	40.0%
	CTGTCATGCTATCTGTTGAT+GGG	+	chr8_4:53103371-53103390	Msa1333080:CDS	40.0%
	CCTTCTACAATTGAACGTTC+AGG	-	chr8_4:53103595-53103614	None:intergenic	40.0%
	CCTGAACGTTCAATTGTAGA+AGG	+	chr8_4:53103592-53103611	Msa1333080:CDS	40.0%
	GGCAGAAGGATATTGCTTAA+TGG	-	chr8_4:53103641-53103660	None:intergenic	40.0%
	ACATGAGCAAGCTCTATATG+TGG	-	chr8_4:53103662-53103681	None:intergenic	40.0%
!	TGAAGGTGTAAAGCAGTCAT+TGG	+	chr8_4:53103723-53103742	Msa1333080:CDS	40.0%
	AAGCAATAGAGGCTTCCAAA+GGG	-	chr8_4:53103809-53103828	None:intergenic	40.0%
	GAAGATATGGCAAGCAATAG+AGG	-	chr8_4:53103820-53103839	None:intergenic	40.0%
	GAGTCCGAGATGAAGTTAAT+TGG	+	chr8_4:53103970-53103989	Msa1333080:intron	40.0%
!	CTTTGAGGATGAAATTGAGC+AGG	-	chr8_4:53104320-53104339	None:intergenic	40.0%
	GGCTTAACAAGAGAACTTTG+AGG	-	chr8_4:53104335-53104354	None:intergenic	40.0%
	AGTCACATACACCTTGATTG+GGG	+	chr8_4:53104424-53104443	Msa1333080:intron	40.0%
	TTGAATCAAGGGAAGTCATG+TGG	+	chr8_4:53104597-53104616	Msa1333080:CDS	40.0%
	TGAGAAAGGAGATGAAGAAG+AGG	+	chr8_4:53104686-53104705	Msa1333080:CDS	40.0%
!	TGACTCTGAAGATTACGATG+AGG	+	chr8_4:53104743-53104762	Msa1333080:CDS	40.0%
	CACAGAACCTTGTAGACAAA+AGG	-	chr8_4:53104827-53104846	None:intergenic	40.0%
	CGAAGATCAAGAACTGGATA+TGG	+	chr8_4:53105031-53105050	Msa1333080:CDS	40.0%
	TGTTGTCATGATATGCGTAC+AGG	+	chr8_4:53105329-53105348	Msa1333080:intron	40.0%
	GTCCTTGTATAAGCACATGA+TGG	-	chr8_4:53105409-53105428	None:intergenic	40.0%
	CATGTGCTTATACAAGGACA+AGG	+	chr8_4:53105410-53105429	Msa1333080:CDS	40.0%
	GGAAATATAAACCACACCCA+GGG	-	chr8_4:53105475-53105494	None:intergenic	40.0%
	TGGAAATATAAACCACACCC+AGG	-	chr8_4:53105476-53105495	None:intergenic	40.0%
	AAATGTTTGTTCCAAGGAGC+AGG	+	chr8_4:53105577-53105596	Msa1333080:three_prime_UTR	40.0%
	ACAATTGAACGTTCAGGCAC+AGG	-	chr8_4:53103589-53103608	None:intergenic	45.0%
	CAAGCTCTATATGTGGCAGA+AGG	-	chr8_4:53103655-53103674	None:intergenic	45.0%
	CAAGCAATAGAGGCTTCCAA+AGG	-	chr8_4:53103810-53103829	None:intergenic	45.0%
	ATGGAAAAGGGTGAAGATGG+AGG	+	chr8_4:53103877-53103896	Msa1333080:CDS	45.0%
!	TGTATCCAGCAGCTCTTTTG+AGG	+	chr8_4:53103930-53103949	Msa1333080:CDS	45.0%
	GCAGGTAAAAGGGCAATCAA+AGG	-	chr8_4:53104302-53104321	None:intergenic	45.0%
	GTCACATACACCTTGATTGG+GGG	+	chr8_4:53104425-53104444	Msa1333080:intron	45.0%
	GAAAATAGTGCCCCCAATCA+AGG	-	chr8_4:53104438-53104457	None:intergenic	45.0%
	CTGCTTCACTTCACTAATGG+AGG	+	chr8_4:53104635-53104654	Msa1333080:CDS	45.0%
	AGAAGAGGCTGAAGATGATG+AGG	+	chr8_4:53104701-53104720	Msa1333080:CDS	45.0%
	GATAGGTATGCTAAAGCTGC+CGG	+	chr8_4:53104966-53104985	Msa1333080:CDS	45.0%
	ATAGGTATGCTAAAGCTGCC+GGG	+	chr8_4:53104967-53104986	Msa1333080:CDS	45.0%
	GGATGTCGAAGATCAAGAAC+TGG	+	chr8_4:53105025-53105044	Msa1333080:CDS	45.0%
!	CTGTCTCCCAGGTTTAGTTT+AGG	+	chr8_4:53105252-53105271	Msa1333080:intron	45.0%
!	AGTTTTCTGAATGCCTTCCC+TGG	+	chr8_4:53105455-53105474	Msa1333080:CDS	45.0%
!	GTTTTCTGAATGCCTTCCCT+GGG	+	chr8_4:53105456-53105475	Msa1333080:CDS	45.0%
	ATATAAACCACACCCAGGGA+AGG	-	chr8_4:53105471-53105490	None:intergenic	45.0%
	ACAATTGAACGTTCAGGCAC+AGG	-	chr8_4:53103589-53103608	None:intergenic	45.0%
	CAAGCTCTATATGTGGCAGA+AGG	-	chr8_4:53103655-53103674	None:intergenic	45.0%
	CAAGCAATAGAGGCTTCCAA+AGG	-	chr8_4:53103810-53103829	None:intergenic	45.0%
	ATGGAAAAGGGTGAAGATGG+AGG	+	chr8_4:53103877-53103896	Msa1333080:CDS	45.0%
!	TGTATCCAGCAGCTCTTTTG+AGG	+	chr8_4:53103930-53103949	Msa1333080:CDS	45.0%
	GCAGGTAAAAGGGCAATCAA+AGG	-	chr8_4:53104302-53104321	None:intergenic	45.0%
	GTCACATACACCTTGATTGG+GGG	+	chr8_4:53104425-53104444	Msa1333080:intron	45.0%
	GAAAATAGTGCCCCCAATCA+AGG	-	chr8_4:53104438-53104457	None:intergenic	45.0%
	CTGCTTCACTTCACTAATGG+AGG	+	chr8_4:53104635-53104654	Msa1333080:CDS	45.0%
	AGAAGAGGCTGAAGATGATG+AGG	+	chr8_4:53104701-53104720	Msa1333080:CDS	45.0%
	GATAGGTATGCTAAAGCTGC+CGG	+	chr8_4:53104966-53104985	Msa1333080:CDS	45.0%
	ATAGGTATGCTAAAGCTGCC+GGG	+	chr8_4:53104967-53104986	Msa1333080:CDS	45.0%
	GGATGTCGAAGATCAAGAAC+TGG	+	chr8_4:53105025-53105044	Msa1333080:CDS	45.0%
!	CTGTCTCCCAGGTTTAGTTT+AGG	+	chr8_4:53105252-53105271	Msa1333080:intron	45.0%
!	AGTTTTCTGAATGCCTTCCC+TGG	+	chr8_4:53105455-53105474	Msa1333080:CDS	45.0%
!	GTTTTCTGAATGCCTTCCCT+GGG	+	chr8_4:53105456-53105475	Msa1333080:CDS	45.0%
	ATATAAACCACACCCAGGGA+AGG	-	chr8_4:53105471-53105490	None:intergenic	45.0%
!!!	TTAATTTATTTTTTTAATTG+GGG	+	chr8_4:53105654-53105673	Msa1333080:three_prime_UTR	5.0%
!!!	TTAATTTATTTTTTTAATTG+GGG	+	chr8_4:53105654-53105673	Msa1333080:three_prime_UTR	5.0%
	TGTCAGAGCTGCTGTCAGTT+TGG	+	chr8_4:53103419-53103438	Msa1333080:CDS	50.0%
	GGTCTGCAATGATTGCAGAG+TGG	+	chr8_4:53103440-53103459	Msa1333080:CDS	50.0%
	TGATTGCAGAGTGGCATGCA+TGG	+	chr8_4:53103449-53103468	Msa1333080:CDS	50.0%
	GATTGCAGAGTGGCATGCAT+GGG	+	chr8_4:53103450-53103469	Msa1333080:CDS	50.0%
	ATTGAACGTTCAGGCACAGG+TGG	-	chr8_4:53103586-53103605	None:intergenic	50.0%
	AGAGGCTTCCAAAGGGAACT+GGG	-	chr8_4:53103802-53103821	None:intergenic	50.0%
	TAGAGGCTTCCAAAGGGAAC+TGG	-	chr8_4:53103803-53103822	None:intergenic	50.0%
	AGTAGCCTCAAAAGAGCTGC+TGG	-	chr8_4:53103938-53103957	None:intergenic	50.0%
!!!	AGCAGCTCTTTTGAGGCTAC+TGG	+	chr8_4:53103937-53103956	Msa1333080:CDS	50.0%
	GGCTGAAGATGATGAGGATG+AGG	+	chr8_4:53104707-53104726	Msa1333080:CDS	50.0%
	TAGGTATGCTAAAGCTGCCG+GGG	+	chr8_4:53104968-53104987	Msa1333080:CDS	50.0%
	TGAACCATCTTCCAATGCCC+CGG	-	chr8_4:53104988-53105007	None:intergenic	50.0%
	TGGGAGACAGCAAGTAAAGC+CGG	-	chr8_4:53105242-53105261	None:intergenic	50.0%
	AAACTCATGACGAGCTGCGA+CGG	-	chr8_4:53105440-53105459	None:intergenic	50.0%
	TGTCAGAGCTGCTGTCAGTT+TGG	+	chr8_4:53103419-53103438	Msa1333080:CDS	50.0%
	GGTCTGCAATGATTGCAGAG+TGG	+	chr8_4:53103440-53103459	Msa1333080:CDS	50.0%
	TGATTGCAGAGTGGCATGCA+TGG	+	chr8_4:53103449-53103468	Msa1333080:CDS	50.0%
	GATTGCAGAGTGGCATGCAT+GGG	+	chr8_4:53103450-53103469	Msa1333080:CDS	50.0%
	ATTGAACGTTCAGGCACAGG+TGG	-	chr8_4:53103586-53103605	None:intergenic	50.0%
	AGAGGCTTCCAAAGGGAACT+GGG	-	chr8_4:53103802-53103821	None:intergenic	50.0%
	TAGAGGCTTCCAAAGGGAAC+TGG	-	chr8_4:53103803-53103822	None:intergenic	50.0%
	AGTAGCCTCAAAAGAGCTGC+TGG	-	chr8_4:53103938-53103957	None:intergenic	50.0%
!!!	AGCAGCTCTTTTGAGGCTAC+TGG	+	chr8_4:53103937-53103956	Msa1333080:CDS	50.0%
	GGCTGAAGATGATGAGGATG+AGG	+	chr8_4:53104707-53104726	Msa1333080:CDS	50.0%
	TAGGTATGCTAAAGCTGCCG+GGG	+	chr8_4:53104968-53104987	Msa1333080:CDS	50.0%
	TGAACCATCTTCCAATGCCC+CGG	-	chr8_4:53104988-53105007	None:intergenic	50.0%
	TGGGAGACAGCAAGTAAAGC+CGG	-	chr8_4:53105242-53105261	None:intergenic	50.0%
	AAACTCATGACGAGCTGCGA+CGG	-	chr8_4:53105440-53105459	None:intergenic	50.0%
	GAAGCGAACCCAGTTCCCTT+TGG	+	chr8_4:53103791-53103810	Msa1333080:CDS	55.0%
!!	GGCTTTACTTGCTGTCTCCC+AGG	+	chr8_4:53105241-53105260	Msa1333080:intron	55.0%
	GAAGCGAACCCAGTTCCCTT+TGG	+	chr8_4:53103791-53103810	Msa1333080:CDS	55.0%
!!	GGCTTTACTTGCTGTCTCCC+AGG	+	chr8_4:53105241-53105260	Msa1333080:intron	55.0%
	TGCTAAAGCTGCCGGGGCAT+TGG	+	chr8_4:53104974-53104993	Msa1333080:CDS	60.0%
	CTGAATGCCTTCCCTGGGTG+TGG	+	chr8_4:53105461-53105480	Msa1333080:CDS	60.0%
!!!	TTTTTTGGGCGGGGGGAGTG+TGG	+	chr8_4:53105612-53105631	Msa1333080:three_prime_UTR	60.0%
	TGCTAAAGCTGCCGGGGCAT+TGG	+	chr8_4:53104974-53104993	Msa1333080:CDS	60.0%
	CTGAATGCCTTCCCTGGGTG+TGG	+	chr8_4:53105461-53105480	Msa1333080:CDS	60.0%
!!!	TTTTTTGGGCGGGGGGAGTG+TGG	+	chr8_4:53105612-53105631	Msa1333080:three_prime_UTR	60.0%
	AGGCACAGGTGGAGCTGGAG+GGG	-	chr8_4:53103575-53103594	None:intergenic	65.0%
	CAGGCACAGGTGGAGCTGGA+GGG	-	chr8_4:53103576-53103595	None:intergenic	65.0%
	TCAGGCACAGGTGGAGCTGG+AGG	-	chr8_4:53103577-53103596	None:intergenic	65.0%
	CGTTCAGGCACAGGTGGAGC+TGG	-	chr8_4:53103580-53103599	None:intergenic	65.0%
!!	GCTGCCGGGGCATTGGAAGA+TGG	+	chr8_4:53104981-53105000	Msa1333080:CDS	65.0%
	AGGCACAGGTGGAGCTGGAG+GGG	-	chr8_4:53103575-53103594	None:intergenic	65.0%
	CAGGCACAGGTGGAGCTGGA+GGG	-	chr8_4:53103576-53103595	None:intergenic	65.0%
	TCAGGCACAGGTGGAGCTGG+AGG	-	chr8_4:53103577-53103596	None:intergenic	65.0%
	CGTTCAGGCACAGGTGGAGC+TGG	-	chr8_4:53103580-53103599	None:intergenic	65.0%
!!	GCTGCCGGGGCATTGGAAGA+TGG	+	chr8_4:53104981-53105000	Msa1333080:CDS	65.0%
	ACAGGTGGAGCTGGAGGGGG+CGG	-	chr8_4:53103571-53103590	None:intergenic	70.0%
	GGCACAGGTGGAGCTGGAGG+GGG	-	chr8_4:53103574-53103593	None:intergenic	70.0%
	ACAGGTGGAGCTGGAGGGGG+CGG	-	chr8_4:53103571-53103590	None:intergenic	70.0%
	GGCACAGGTGGAGCTGGAGG+GGG	-	chr8_4:53103574-53103593	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	53103268	53105688	53103268	ID=Msa1333080;Name=Msa1333080
chr8_4	mRNA	53103268	53105688	53103268	ID=Msa1333080-mRNA-1;Parent=Msa1333080;Name=Msa1333080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0\|0.66\|0.75\|1\|1\|1\|4\|183\|394
chr8_4	exon	53103268	53103958	53103268	ID=Msa1333080-mRNA-1:exon:16209;Parent=Msa1333080-mRNA-1
chr8_4	exon	53104565	53104764	53104565	ID=Msa1333080-mRNA-1:exon:16210;Parent=Msa1333080-mRNA-1
chr8_4	exon	53104921	53105059	53104921	ID=Msa1333080-mRNA-1:exon:16211;Parent=Msa1333080-mRNA-1
chr8_4	exon	53105351	53105688	53105351	ID=Msa1333080-mRNA-1:exon:16212;Parent=Msa1333080-mRNA-1
chr8_4	CDS	53103268	53103958	53103268	ID=Msa1333080-mRNA-1:cds;Parent=Msa1333080-mRNA-1
chr8_4	CDS	53104565	53104764	53104565	ID=Msa1333080-mRNA-1:cds;Parent=Msa1333080-mRNA-1
chr8_4	CDS	53104921	53105059	53104921	ID=Msa1333080-mRNA-1:cds;Parent=Msa1333080-mRNA-1
chr8_4	CDS	53105351	53105505	53105351	ID=Msa1333080-mRNA-1:cds;Parent=Msa1333080-mRNA-1
chr8_4	three_prime_UTR	53105506	53105688	53105506	ID=Msa1333080-mRNA-1:three_prime_utr;Parent=Msa1333080-mRNA-1

Gene Sequence

>Msa1333080

ATGCTAGTTTTTTTGAAGTGTTCTTCTGAATTTAATAAGGATGAACAAGACCAGAATTTTCCGAATTCATCATGCATAGAAGATTTGTCAACTTTGTTACGGTCTGTCATGCTATCTGTTGATGGGAATCACTTGATTCAAGAGCTTAAAGTGTCAGAGCTGCTGTCAGTTTGGTCTGCAATGATTGCAGAGTGGCATGCATGGGAAGAATCAGAAGATTTGTCAATTTTTTATGTGATTAAAGAAATTGTGAATTTAGATGGTTCATACAAGCTCAAAAACTTTCTTGTAAAAGAGATTCCGCCCCCTCCAGCTCCACCTGTGCCTGAACGTTCAATTGTAGAAGGAATTGGCACTTTTGTTAGTGAGGCCATTAAGCAATATCCTTCTGCCACATATAGAGCTTGCTCATGTGTCCATGCATTACTACATTGTCCAACATACTCAATTGAAACTGAAGGTGTAAAGCAGTCATTGGCTATTGTTTTTAGTCGGGCAGCATTCTCTCGCTTTGTTGAAGTTCGAAGCGAACCCAGTTCCCTTTGGAAGCCTCTATTGCTTGCCATATCTTCGTGCTATTTGTGTTATCCTGAAATTGTAGAAGGTATAATGGAAAAGGGTGAAGATGGAGGCATATCAATTTGGGCATCTGCATTGTGCGATGTATCCAGCAGCTCTTTTGAGGCTACTGTGATGACACTGGCGCGATTGATTGAGCAACTCTTGAATCAAGGGAAGTCATGTGGTGATTCAATTCAAAACTGCTTCACTTCACTAATGGAGGTATCCATTCAGTTGAAAGAATTACAAGATGAGAAAGGAGATGAAGAAGAGGCTGAAGATGATGAGGATGAGGATAGTGACGATGATGACTCTGAAGATTACGATGAGGACTCGGAGGTTGAAGAATTTGAAGAAACGGAAGAAGAATTTCTTGATAGGTATGCTAAAGCTGCCGGGGCATTGGAAGATGGTTCAGTTATTATTGAAGAGGGGGATGTCGAAGATCAAGAACTGGATATGGAATTAGGTCAATTACTTGACGTTGATGAGCAGAAAATTGTGTTGTCCTTGATAGACAAATACCATCATGTGCTTATACAAGGACAAGGTTTGCCGTCGCAGCTCGTCATGAGTTTTCTGAATGCCTTCCCTGGGTGTGGTTTATATTTCCAGCAAAACTGA

Protein sequence

>Msa1333080

MLVFLKCSSEFNKDEQDQNFPNSSCIEDLSTLLRSVMLSVDGNHLIQELKVSELLSVWSAMIAEWHAWEESEDLSIFYVIKEIVNLDGSYKLKNFLVKEIPPPPAPPVPERSIVEGIGTFVSEAIKQYPSATYRACSCVHALLHCPTYSIETEGVKQSLAIVFSRAAFSRFVEVRSEPSSLWKPLLLAISSCYLCYPEIVEGIMEKGEDGGISIWASALCDVSSSSFEATVMTLARLIEQLLNQGKSCGDSIQNCFTSLMEVSIQLKELQDEKGDEEEAEDDEDEDSDDDDSEDYDEDSEVEEFEETEEEFLDRYAKAAGALEDGSVIIEEGDVEDQELDMELGQLLDVDEQKIVLSLIDKYHHVLIQGQGLPSQLVMSFLNAFPGCGLYFQQN*