Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493520 | XP_013459118.1 | 46.559 | 247 | 80 | 4 | 1 | 197 | 1 | 245 | 5.24e-34 | 138 |
| Msa0493520 | XP_013459118.1 | 52.525 | 99 | 29 | 2 | 322 | 404 | 8 | 104 | 9.28e-13 | 79.7 |
| Msa0493520 | XP_013459118.1 | 52.747 | 182 | 49 | 7 | 226 | 398 | 38 | 191 | 5.98e-20 | 100 |
| Msa0493520 | XP_013459118.1 | 83.871 | 217 | 21 | 1 | 121 | 323 | 21 | 237 | 2.55e-88 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493520 | sp|Q9LXB8|PLPK1_ARATH | 54.007 | 287 | 86 | 10 | 128 | 398 | 32 | 288 | 9.80e-50 | 175 |
| Msa0493520 | sp|Q9LXB8|PLPK1_ARATH | 44.330 | 388 | 133 | 15 | 24 | 377 | 28 | 366 | 5.80e-46 | 165 |
| Msa0493520 | sp|Q9LXB8|PLPK1_ARATH | 44.907 | 216 | 75 | 5 | 199 | 408 | 43 | 220 | 1.43e-25 | 110 |
| Msa0493520 | sp|Q9LXB8|PLPK1_ARATH | 42.021 | 188 | 77 | 6 | 36 | 208 | 200 | 370 | 3.26e-15 | 80.1 |
| Msa0493520 | sp|Q9LXB8|PLPK1_ARATH | 40.606 | 165 | 48 | 3 | 251 | 412 | 41 | 158 | 5.77e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493520 | I3S1U4 | 46.559 | 247 | 80 | 4 | 1 | 197 | 1 | 245 | 2.50e-34 | 138 |
| Msa0493520 | I3S1U4 | 52.525 | 99 | 29 | 2 | 322 | 404 | 8 | 104 | 4.43e-13 | 79.7 |
| Msa0493520 | I3S1U4 | 52.747 | 182 | 49 | 7 | 226 | 398 | 38 | 191 | 2.86e-20 | 100 |
| Msa0493520 | I3S1U4 | 83.871 | 217 | 21 | 1 | 121 | 323 | 21 | 237 | 1.22e-88 | 278 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0446170 | Msa0493520 | 0.809406 | 1.922716e-50 | -8.615850e-47 |
| Msa0351890 | Msa0493520 | 0.822945 | 1.804984e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493520 | MtrunA17_Chr3g0087151 | 83.871 | 217 | 21 | 1 | 121 | 323 | 21 | 237 | 2.35e-92 | 278 |
| Msa0493520 | MtrunA17_Chr3g0087151 | 46.559 | 247 | 80 | 4 | 1 | 197 | 1 | 245 | 4.82e-38 | 138 |
| Msa0493520 | MtrunA17_Chr3g0087151 | 52.747 | 182 | 49 | 7 | 226 | 398 | 38 | 191 | 5.50e-24 | 100 |
| Msa0493520 | MtrunA17_Chr3g0087151 | 52.525 | 99 | 29 | 2 | 322 | 404 | 8 | 104 | 8.54e-17 | 79.7 |
| Msa0493520 | MtrunA17_Chr3g0087231 | 54.094 | 342 | 119 | 9 | 1 | 320 | 1 | 326 | 1.17e-75 | 239 |
| Msa0493520 | MtrunA17_Chr3g0087231 | 51.032 | 339 | 78 | 10 | 125 | 395 | 25 | 343 | 6.20e-62 | 203 |
| Msa0493520 | MtrunA17_Chr3g0087231 | 44.444 | 99 | 47 | 1 | 322 | 412 | 8 | 106 | 5.45e-14 | 72.8 |
| Msa0493520 | MtrunA17_Chr3g0087211 | 53.889 | 360 | 107 | 11 | 1 | 313 | 1 | 348 | 6.30e-75 | 238 |
| Msa0493520 | MtrunA17_Chr3g0087211 | 50.437 | 343 | 110 | 8 | 121 | 415 | 21 | 351 | 4.57e-65 | 212 |
| Msa0493520 | MtrunA17_Chr3g0087211 | 59.155 | 71 | 23 | 2 | 323 | 390 | 9 | 76 | 6.81e-13 | 69.7 |
| Msa0493520 | MtrunA17_Chr3g0087041 | 74.699 | 166 | 19 | 3 | 121 | 273 | 21 | 176 | 7.07e-56 | 182 |
| Msa0493520 | MtrunA17_Chr3g0087041 | 53.171 | 205 | 58 | 5 | 1 | 196 | 1 | 176 | 2.52e-40 | 142 |
| Msa0493520 | MtrunA17_Chr3g0087041 | 47.692 | 195 | 44 | 7 | 204 | 395 | 38 | 177 | 4.04e-20 | 87.4 |
| Msa0493520 | MtrunA17_Chr3g0087041 | 50.625 | 160 | 40 | 5 | 253 | 408 | 39 | 163 | 1.42e-18 | 83.2 |
| Msa0493520 | MtrunA17_Chr3g0087041 | 60.000 | 80 | 29 | 1 | 322 | 398 | 8 | 87 | 1.10e-17 | 80.5 |
| Msa0493520 | MtrunA17_Chr3g0087161 | 72.093 | 86 | 24 | 0 | 323 | 408 | 9 | 94 | 3.07e-32 | 118 |
| Msa0493520 | MtrunA17_Chr3g0087161 | 56.589 | 129 | 38 | 3 | 1 | 124 | 1 | 116 | 2.08e-31 | 116 |
| Msa0493520 | MtrunA17_Chr3g0087161 | 47.872 | 94 | 32 | 2 | 125 | 218 | 25 | 101 | 6.33e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493520 | AT5G09530.1 | 54.007 | 287 | 86 | 10 | 128 | 398 | 32 | 288 | 9.97e-51 | 175 |
| Msa0493520 | AT5G09530.1 | 44.330 | 388 | 133 | 15 | 24 | 377 | 28 | 366 | 5.90e-47 | 165 |
| Msa0493520 | AT5G09530.1 | 44.907 | 216 | 75 | 5 | 199 | 408 | 43 | 220 | 1.45e-26 | 110 |
| Msa0493520 | AT5G09530.1 | 42.021 | 188 | 77 | 6 | 36 | 208 | 200 | 370 | 3.31e-16 | 80.1 |
| Msa0493520 | AT5G09530.1 | 40.606 | 165 | 48 | 3 | 251 | 412 | 41 | 158 | 5.87e-13 | 70.5 |
| Msa0493520 | AT5G09520.1 | 55.652 | 115 | 38 | 4 | 123 | 237 | 25 | 126 | 3.84e-21 | 89.0 |
| Msa0493520 | AT5G09520.1 | 63.380 | 71 | 25 | 1 | 251 | 320 | 39 | 109 | 4.87e-14 | 69.3 |
| Msa0493520 | AT5G09520.1 | 49.107 | 112 | 30 | 2 | 183 | 294 | 37 | 121 | 1.63e-13 | 67.8 |
| Msa0493520 | AT5G09520.1 | 55.696 | 79 | 29 | 1 | 248 | 320 | 47 | 125 | 1.21e-12 | 65.1 |
| Msa0493520 | AT5G09520.1 | 51.546 | 97 | 37 | 4 | 199 | 292 | 41 | 130 | 4.26e-11 | 60.8 |
Find 116 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGACTTCTTAAGATTTC+TGG | 0.067425 | 3_4:+18669848 | Msa0493520:CDS |
| TCAGGTACCTTTGGTATTTC+TGG | 0.080700 | 3_4:-18673128 | None:intergenic |
| TCGGGTATCTTTGGAATTTC+TGG | 0.088558 | 3_4:-18672891 | None:intergenic |
| AAACCTAACACATTGGTTTC+TGG | 0.195406 | 3_4:+18676065 | Msa0493520:CDS |
| AGCTCATGTTTGGGCAATTC+AGG | 0.197717 | 3_4:-18672843 | None:intergenic |
| TGAATAACAACTTCGTATTT+AGG | 0.210429 | 3_4:-18670034 | None:intergenic |
| TCAGGTACCTTAGGTAATTC+TGG | 0.230454 | 3_4:-18672684 | None:intergenic |
| AACTCTAGCTTTGGTAATTC+AGG | 0.247874 | 3_4:-18673146 | None:intergenic |
| ACCTTTGGTATTTCTGGTTT+GGG | 0.248136 | 3_4:-18673122 | None:intergenic |
| TTTGGCAATTCGGGTATCTT+TGG | 0.261040 | 3_4:-18672900 | None:intergenic |
| AAACCTAACACAATGGTTTC+GGG | 0.268410 | 3_4:+18669758 | Msa0493520:CDS |
| TACCTTTGGTATTTCTGGTT+TGG | 0.269930 | 3_4:-18673123 | None:intergenic |
| GATGAGTTAATATACAATTT+AGG | 0.275665 | 3_4:-18676295 | None:intergenic |
| TTTGGTAGTTCATAAATCTT+AGG | 0.278830 | 3_4:-18676164 | None:intergenic |
| GACTTTAGGTAGCTCATGTT+TGG | 0.279635 | 3_4:-18672853 | None:intergenic |
| TTTCAGGGTAACTTGGGTTT+TGG | 0.295976 | 3_4:-18673227 | None:intergenic |
| TTAGGTAATTCAGGAATCTT+AGG | 0.302765 | 3_4:-18672660 | None:intergenic |
| AATTCTGGCTTAGGTAATTC+AGG | 0.304530 | 3_4:-18672669 | None:intergenic |
| TCAGGTACCTTAGGGATATC+TGG | 0.309626 | 3_4:-18673029 | None:intergenic |
| ATAGACAATTCGGGGACTTT+AGG | 0.311738 | 3_4:-18672867 | None:intergenic |
| TTAGGAACCAATGTTGTTCT+TGG | 0.317428 | 3_4:-18676277 | None:intergenic |
| AGCTCAGGCTTTGGAAGTTC+AGG | 0.319717 | 3_4:-18672735 | None:intergenic |
| ACCTTAGGTAGTTCGGGTTT+TGG | 0.322718 | 3_4:-18673056 | None:intergenic |
| AGTCCAGGCTTTACCAATTC+AGG | 0.323362 | 3_4:-18673179 | None:intergenic |
| TTAGGCAACTCGGGAACTTT+AGG | 0.329308 | 3_4:-18672816 | None:intergenic |
| ACCTTAAGCAACTCTTGTTT+TGG | 0.329742 | 3_4:-18669941 | None:intergenic |
| TACCTTAGGGATATCTGGTT+TGG | 0.332667 | 3_4:-18673024 | None:intergenic |
| AGAGATGGAAAATCAAGTTT+TGG | 0.332869 | 3_4:-18676125 | None:intergenic |
| TTCAGGTACCTTAGGTAGTT+CGG | 0.333628 | 3_4:-18673063 | None:intergenic |
| AACCTAACACATTGGTTTCT+GGG | 0.342242 | 3_4:+18676066 | Msa0493520:CDS |
| TCAGGTACCTTAGGTAGTTC+GGG | 0.349878 | 3_4:-18673062 | None:intergenic |
| AAGTCGAACTTTGGCAATTC+GGG | 0.351787 | 3_4:-18672909 | None:intergenic |
| ATAGGTGGAAAATCAAGTTT+TGG | 0.353325 | 3_4:-18672621 | None:intergenic |
| TGATTAATTTGAGGGGTTCC+AGG | 0.357305 | 3_4:-18670007 | None:intergenic |
| ACTTTGGGAAACTCGGGTTT+TGG | 0.357337 | 3_4:-18672783 | None:intergenic |
| TTTGGTAACTCAGGTACCTT+AGG | 0.357882 | 3_4:-18673038 | None:intergenic |
| TTAGGCAACTCAGGAACTTT+GGG | 0.358876 | 3_4:-18672798 | None:intergenic |
| TAAGTCGAACTTTGGCAATT+CGG | 0.362455 | 3_4:-18672910 | None:intergenic |
| AATTTCTGGCATAGACAATT+CGG | 0.365865 | 3_4:-18672877 | None:intergenic |
| AAAACCTAACACAATGGTTT+CGG | 0.366149 | 3_4:+18669757 | Msa0493520:CDS |
| GGAAGCTCAGGCTTTGGTAT+AGG | 0.376080 | 3_4:-18672639 | None:intergenic |
| AGAGGTGGAAAATCAAGTTT+TGG | 0.377975 | 3_4:-18669818 | None:intergenic |
| TTGGGCAACTCAGAGACTTT+TGG | 0.383888 | 3_4:-18673104 | None:intergenic |
| AGTTCAGGGACATTAACTTT+AGG | 0.387475 | 3_4:-18673203 | None:intergenic |
| CTCAGGAACTTTGGGAAACT+CGG | 0.389158 | 3_4:-18672790 | None:intergenic |
| TTTGGAAGCTGAGGTATGTT+TGG | 0.390763 | 3_4:-18669800 | None:intergenic |
| TTTAGGCAACTCAGGAACTT+TGG | 0.393082 | 3_4:-18672799 | None:intergenic |
| TGAGGGGTTCCAGGCACTCC+TGG | 0.394365 | 3_4:-18669998 | None:intergenic |
| ATCTTAGGAAGCTCAGGCTT+TGG | 0.394512 | 3_4:-18672645 | None:intergenic |
| ATTTCTGGCATAGACAATTC+GGG | 0.397522 | 3_4:-18672876 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+TGG | 0.399783 | 3_4:-18673137 | None:intergenic |
| AACTTAGGTAGCTCAGGCTT+TGG | 0.406351 | 3_4:-18672744 | None:intergenic |
| TAGGTAGTTGATTAATTTGA+GGG | 0.408131 | 3_4:-18670015 | None:intergenic |
| ACTTTAGGTAGCTCATGTTT+GGG | 0.416336 | 3_4:-18672852 | None:intergenic |
| GATTTCTGGATTGTCAAAAT+CGG | 0.420632 | 3_4:+18669862 | Msa0493520:CDS |
| TTCAGGGACTTTAGGTGGCT+CGG | 0.421818 | 3_4:-18672964 | None:intergenic |
| ACCTTAGGGATATCTGGTTT+GGG | 0.423518 | 3_4:-18673023 | None:intergenic |
| ATGATTGTAGTTATATTGTC+AGG | 0.425630 | 3_4:+18676041 | Msa0493520:CDS |
| TTTACCAATTCAGGTACCTT+AGG | 0.428581 | 3_4:-18673170 | None:intergenic |
| ATAGTAACAGCGACGGGATC+AGG | 0.430565 | 3_4:-18670058 | None:intergenic |
| ATTATTGTAGTTATATTGTC+AGG | 0.431395 | 3_4:+18669734 | Msa0493520:CDS |
| GTTACCTAAGGTACCTGAAT+TGG | 0.434651 | 3_4:+18673166 | Msa0493520:CDS |
| ACCTTAGGTAACTCTAGCTT+TGG | 0.436884 | 3_4:-18673155 | None:intergenic |
| AGAGTATTACAATGGTTGTC+GGG | 0.440611 | 3_4:+18672562 | Msa0493520:intron |
| GCCCCAGAAACCAATGTGTT+AGG | 0.444090 | 3_4:-18676068 | None:intergenic |
| AATTTAGGTAAGTCGAACTT+TGG | 0.451350 | 3_4:-18672918 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+AGG | 0.451961 | 3_4:-18673071 | None:intergenic |
| TCAGGAATCTTAGGAAGCTC+AGG | 0.453881 | 3_4:-18672651 | None:intergenic |
| ATTGAAATCCCAGGAGTGCC+TGG | 0.454728 | 3_4:+18669989 | Msa0493520:CDS |
| ACATTAAACTTAGGTAGCTC+AGG | 0.466667 | 3_4:-18672750 | None:intergenic |
| ACCTTAGGTAATTCTGGCTT+AGG | 0.473542 | 3_4:-18672678 | None:intergenic |
| TTAGGTAGTTGATTAATTTG+AGG | 0.473838 | 3_4:-18670016 | None:intergenic |
| GAGGGGTTCCAGGCACTCCT+GGG | 0.477340 | 3_4:-18669997 | None:intergenic |
| AATATAACTACAATAATGAA+TGG | 0.478908 | 3_4:-18669728 | None:intergenic |
| AATATAACTACAATCATGAA+TGG | 0.478908 | 3_4:-18676035 | None:intergenic |
| GGCAATTCAGGGACTTTAGG+TGG | 0.484066 | 3_4:-18672969 | None:intergenic |
| AATTCAGGAACATTAAACTT+AGG | 0.490699 | 3_4:-18672759 | None:intergenic |
| TTGGGCAATTCAGGGAACTT+AGG | 0.491393 | 3_4:-18672834 | None:intergenic |
| AGTTCATGCTTTGCTAGAGA+TGG | 0.498402 | 3_4:-18676140 | None:intergenic |
| TTCAGGGAACTTAGGCAACT+CGG | 0.499436 | 3_4:-18672826 | None:intergenic |
| ACATTAACTTTAGGTAGTCC+AGG | 0.501965 | 3_4:-18673194 | None:intergenic |
| TCAGGGACTTTAGGTGGCTC+GGG | 0.502047 | 3_4:-18672963 | None:intergenic |
| TTCAAAACCAAGAACAACAT+TGG | 0.502428 | 3_4:+18676270 | Msa0493520:CDS |
| GATTCTGGTATTTCTAACTT+TGG | 0.505210 | 3_4:-18676182 | None:intergenic |
| TTGGTAACTCAGGTACCTTA+GGG | 0.506353 | 3_4:-18673037 | None:intergenic |
| GTACCTGAATTGGTAAAGCC+TGG | 0.510210 | 3_4:+18673176 | Msa0493520:CDS |
| GCTCATGTTTGGGCAATTCA+GGG | 0.523757 | 3_4:-18672842 | None:intergenic |
| AAGAGTATTACAATGGTTGT+CGG | 0.526376 | 3_4:+18672561 | Msa0493520:intron |
| ACCTAACACATTGGTTTCTG+GGG | 0.528363 | 3_4:+18676067 | Msa0493520:CDS |
| TCAGGAACTTTGGGAAACTC+GGG | 0.528389 | 3_4:-18672789 | None:intergenic |
| AGCTCAGGCTTTGGTATAGG+TGG | 0.530445 | 3_4:-18672636 | None:intergenic |
| GCCAAAACAAGAGTTGCTTA+AGG | 0.535506 | 3_4:+18669940 | Msa0493520:CDS |
| ACCAAAACCCGAACTACCTA+AGG | 0.540714 | 3_4:+18673055 | Msa0493520:CDS |
| TGACAATGAAATGCAAGCCA+TGG | 0.548993 | 3_4:-18669693 | None:intergenic |
| ACCTAACACAATGGTTTCGG+GGG | 0.565936 | 3_4:+18669760 | Msa0493520:CDS |
| TCGGGAACTTTAGGCAACTC+AGG | 0.569614 | 3_4:-18672807 | None:intergenic |
| TTTCCACCTCTAGCAAAGCA+TGG | 0.577094 | 3_4:+18669830 | Msa0493520:CDS |
| GTCAGGAAAACCTAACACAT+TGG | 0.577135 | 3_4:+18676058 | Msa0493520:CDS |
| TCAGGGAACTTAGGCAACTC+GGG | 0.582113 | 3_4:-18672825 | None:intergenic |
| CCAGGTATAGTAACAGCGAC+GGG | 0.583912 | 3_4:-18670064 | None:intergenic |
| AGTCCATGCTTTGCTAGAGG+TGG | 0.592180 | 3_4:-18669833 | None:intergenic |
| AACCTAACACAATGGTTTCG+GGG | 0.595061 | 3_4:+18669759 | Msa0493520:CDS |
| ACCTAAGCCAGAATTACCTA+AGG | 0.608272 | 3_4:+18672677 | Msa0493520:CDS |
| TTTCTGGCATAGACAATTCG+GGG | 0.611978 | 3_4:-18672875 | None:intergenic |
| ACCAAAGCTAGAGTTACCTA+AGG | 0.616598 | 3_4:+18673154 | Msa0493520:CDS |
| TCCAGGTATAGTAACAGCGA+CGG | 0.619107 | 3_4:-18670065 | None:intergenic |
| CATGAGCTAATTGAAATCCC+AGG | 0.624030 | 3_4:+18669980 | Msa0493520:CDS |
| AGAAGTCCATGCTTTGCTAG+AGG | 0.627744 | 3_4:-18669836 | None:intergenic |
| GAGTATTACAATGGTTGTCG+GGG | 0.633099 | 3_4:+18672563 | Msa0493520:intron |
| AGGTAGTTGATTAATTTGAG+GGG | 0.635270 | 3_4:-18670014 | None:intergenic |
| GTCAGGAAAACCTAACACAA+TGG | 0.647104 | 3_4:+18669751 | Msa0493520:CDS |
| GCCCAAACCAGATATCCCTA+AGG | 0.649847 | 3_4:+18673022 | Msa0493520:CDS |
| ATTACTGGCACAAACAACTC+AGG | 0.653108 | 3_4:-18669899 | None:intergenic |
| GTCAGCCAAGAGTATTACAA+TGG | 0.663719 | 3_4:+18672554 | Msa0493520:intron |
| GCCCAAACCAGAAATACCAA+AGG | 0.685777 | 3_4:+18673121 | Msa0493520:CDS |
| TCTAGAGTCGAACATACCTG+AGG | 0.701502 | 3_4:+18672596 | Msa0493520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr3_4:18671891-18671910 | Msa0493520:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr3_4:18671892-18671911 | Msa0493520:intron | 0.0% |
| !! | AATATAAATAAATAATAATT+TGG | + | chr3_4:18673716-18673735 | Msa0493520:intron | 0.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | + | chr3_4:18670233-18670252 | Msa0493520:intron | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | + | chr3_4:18670234-18670253 | Msa0493520:intron | 10.0% |
| !!! | ATTTATTTTTCAAAGATTAT+AGG | + | chr3_4:18671611-18671630 | Msa0493520:intron | 10.0% |
| !!! | TTTATTTTTCAAAGATTATA+GGG | + | chr3_4:18671612-18671631 | Msa0493520:intron | 10.0% |
| !! | TATAATATGTAATCTTAATA+AGG | - | chr3_4:18673445-18673464 | None:intergenic | 10.0% |
| !! | ATAAATAAATAATAATTTGG+TGG | + | chr3_4:18673719-18673738 | Msa0493520:intron | 10.0% |
| !!! | ATTTAAACAATTTTTTTTAC+AGG | - | chr3_4:18674252-18674271 | None:intergenic | 10.0% |
| !!! | ATTTAAAGATTTTTTGATTT+TGG | - | chr3_4:18674406-18674425 | None:intergenic | 10.0% |
| !! | TCAAAAAATCTTTAAATTAT+AGG | + | chr3_4:18674409-18674428 | Msa0493520:intron | 10.0% |
| !! | CAAAAAATCTTTAAATTATA+GGG | + | chr3_4:18674410-18674429 | Msa0493520:intron | 10.0% |
| !! | TTTAAAAAAAAAGACTAAAT+AGG | + | chr3_4:18675152-18675171 | Msa0493520:intron | 10.0% |
| !!! | TTTTAATGAAAAATAAAACT+GGG | - | chr3_4:18675284-18675303 | None:intergenic | 10.0% |
| !!! | ATTTTAATGAAAAATAAAAC+TGG | - | chr3_4:18675285-18675304 | None:intergenic | 10.0% |
| !!! | TTTAATTACAACTATTTTTT+TGG | - | chr3_4:18675832-18675851 | None:intergenic | 10.0% |
| !! | AATATAACTACAATAATGAA+TGG | - | chr3_4:18669731-18669750 | None:intergenic | 15.0% |
| !! | TGATGAATAATTTAATCTAA+AGG | - | chr3_4:18671047-18671066 | None:intergenic | 15.0% |
| !!! | TTATTTTTCAAAGATTATAG+GGG | + | chr3_4:18671613-18671632 | Msa0493520:intron | 15.0% |
| !! | TATAATTATACGACATAATT+TGG | + | chr3_4:18671717-18671736 | Msa0493520:intron | 15.0% |
| !!! | TTTGATCGTAATATATATTT+TGG | + | chr3_4:18671855-18671874 | Msa0493520:intron | 15.0% |
| !! | TTAAATACCCATTAATATAT+GGG | - | chr3_4:18672085-18672104 | None:intergenic | 15.0% |
| !!! | CTAATTAAATTTTGTATAAC+TGG | + | chr3_4:18672254-18672273 | Msa0493520:intron | 15.0% |
| !!! | TCAAATTTAATTTTTAGTTG+AGG | - | chr3_4:18673955-18673974 | None:intergenic | 15.0% |
| !! | TAGAAATCGTTAATATTATA+GGG | - | chr3_4:18674221-18674240 | None:intergenic | 15.0% |
| !!! | ATCTAAACAAATTTTTTTAC+AGG | + | chr3_4:18674438-18674457 | Msa0493520:intron | 15.0% |
| !!! | TCTAAACAAATTTTTTTACA+GGG | + | chr3_4:18674439-18674458 | Msa0493520:intron | 15.0% |
| !! | TATCATTAACAAATTAACTT+GGG | - | chr3_4:18674733-18674752 | None:intergenic | 15.0% |
| !! | TTATCATTAACAAATTAACT+TGG | - | chr3_4:18674734-18674753 | None:intergenic | 15.0% |
| !!! | ATCTAAAATCTAAAATTGTA+AGG | + | chr3_4:18674965-18674984 | Msa0493520:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTATGTGG+TGG | - | chr3_4:18675391-18675410 | None:intergenic | 15.0% |
| !!! | TTTAGACATAAGTTTTTTAA+TGG | - | chr3_4:18675445-18675464 | None:intergenic | 15.0% |
| !! | ATTATTGTAGTTATATTGTC+AGG | + | chr3_4:18669734-18669753 | Msa0493520:CDS | 20.0% |
| !!! | AATAAAATTGTTGTTTAAGC+TGG | + | chr3_4:18670378-18670397 | Msa0493520:intron | 20.0% |
| !! | AAAATTAGGAACTCAAAATT+TGG | - | chr3_4:18670441-18670460 | None:intergenic | 20.0% |
| !!! | AGCAAGATTTCTAAAAAATT+AGG | - | chr3_4:18670455-18670474 | None:intergenic | 20.0% |
| !! | TAGAAATGAAAGGAATAATT+AGG | + | chr3_4:18670478-18670497 | Msa0493520:intron | 20.0% |
| !! | TCTAACATAAATCTAACATT+TGG | - | chr3_4:18670626-18670645 | None:intergenic | 20.0% |
| !! | TCACGAAAAGAAAAAAAAAA+TGG | + | chr3_4:18670977-18670996 | Msa0493520:intron | 20.0% |
| !! | AAAATAGTAGTCTAAGTATT+TGG | - | chr3_4:18671021-18671040 | None:intergenic | 20.0% |
| !!! | ATCACATTTTATTATCTTCA+AGG | + | chr3_4:18671063-18671082 | Msa0493520:intron | 20.0% |
| !!! | AACAATTTTTTACACGATAT+AGG | + | chr3_4:18671485-18671504 | Msa0493520:intron | 20.0% |
| !!! | ACAATTTTTTACACGATATA+GGG | + | chr3_4:18671486-18671505 | Msa0493520:intron | 20.0% |
| !! | ATGGAAGATTAATTTAATGA+TGG | + | chr3_4:18671743-18671762 | Msa0493520:intron | 20.0% |
| !! | TAAATACCCATTAATATATG+GGG | - | chr3_4:18672084-18672103 | None:intergenic | 20.0% |
| !! | GTTAAATACCCATTAATATA+TGG | - | chr3_4:18672086-18672105 | None:intergenic | 20.0% |
| !! | AAAAATTAGAACGTTATTGT+TGG | - | chr3_4:18672211-18672230 | None:intergenic | 20.0% |
| !! | TTCAAGAAGATATATTATAG+TGG | - | chr3_4:18672452-18672471 | None:intergenic | 20.0% |
| !!! | ACTTTAGAATTTGAAAATCT+TGG | - | chr3_4:18673576-18673595 | None:intergenic | 20.0% |
| !! | AAAAGTTATGAAGTTGAATT+TGG | - | chr3_4:18673648-18673667 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATCTACATTTT+AGG | - | chr3_4:18674015-18674034 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTAATGAC+CGG | + | chr3_4:18674114-18674133 | Msa0493520:intron | 20.0% |
| !! | AGAAATCGTTAATATTATAG+GGG | - | chr3_4:18674220-18674239 | None:intergenic | 20.0% |
| !! | CTAGAAATCGTTAATATTAT+AGG | - | chr3_4:18674222-18674241 | None:intergenic | 20.0% |
| !!! | CCAAAAATTTTCAAATTACA+GGG | - | chr3_4:18674280-18674299 | None:intergenic | 20.0% |
| !!! | ACCAAAAATTTTCAAATTAC+AGG | - | chr3_4:18674281-18674300 | None:intergenic | 20.0% |
| !!! | AGAATTTTCTCAAATTACAA+GGG | + | chr3_4:18674358-18674377 | Msa0493520:intron | 20.0% |
| !!! | CTAAACAAATTTTTTTACAG+GGG | + | chr3_4:18674440-18674459 | Msa0493520:intron | 20.0% |
| !!! | ATAAGCAAAAAACAACATTT+TGG | + | chr3_4:18674596-18674615 | Msa0493520:intron | 20.0% |
| !! | CATTCATTTAATGATGTATT+TGG | - | chr3_4:18674661-18674680 | None:intergenic | 20.0% |
| !! | CAATTAAAATCACAATTTGA+CGG | - | chr3_4:18674914-18674933 | None:intergenic | 20.0% |
| !!! | TTTCTTTGAAATAAGTTTCA+TGG | + | chr3_4:18675056-18675075 | Msa0493520:intron | 20.0% |
| !!! | TTCTTTGAAATAAGTTTCAT+GGG | + | chr3_4:18675057-18675076 | Msa0493520:intron | 20.0% |
| !!! | CTAATATGATGATTTTGATA+TGG | - | chr3_4:18675913-18675932 | None:intergenic | 20.0% |
| !! | AATATAACTACAATCATGAA+TGG | - | chr3_4:18676038-18676057 | None:intergenic | 20.0% |
| !!! | AAGACAACTCAAATATTTTA+GGG | - | chr3_4:18676223-18676242 | None:intergenic | 20.0% |
| !!! | GTTTTGAAATTTACATAACT+CGG | - | chr3_4:18676258-18676277 | None:intergenic | 20.0% |
| !! | GATGAGTTAATATACAATTT+AGG | - | chr3_4:18676298-18676317 | None:intergenic | 20.0% |
| !! | TAGGTAGTTGATTAATTTGA+GGG | - | chr3_4:18670018-18670037 | None:intergenic | 25.0% |
| !! | TTAGGTAGTTGATTAATTTG+AGG | - | chr3_4:18670019-18670038 | None:intergenic | 25.0% |
| ! | TGAATAACAACTTCGTATTT+AGG | - | chr3_4:18670037-18670056 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | - | chr3_4:18670301-18670320 | None:intergenic | 25.0% |
| ! | AAATGAAAGGAATAATTAGG+TGG | + | chr3_4:18670481-18670500 | Msa0493520:intron | 25.0% |
| ! | GACATTGCATAATTTATACA+GGG | + | chr3_4:18670713-18670732 | Msa0493520:intron | 25.0% |
| ! | ACATTGCATAATTTATACAG+GGG | + | chr3_4:18670714-18670733 | Msa0493520:intron | 25.0% |
| ! | TACTTATATTCAAAGAGTTG+TGG | - | chr3_4:18670916-18670935 | None:intergenic | 25.0% |
| !! | TGTGTTTATTAGTTAGTTTG+CGG | - | chr3_4:18670951-18670970 | None:intergenic | 25.0% |
| ! | TTGTGATAAAGTTCATCTTA+GGG | - | chr3_4:18671278-18671297 | None:intergenic | 25.0% |
| ! | TTGTTTATGTATTCCAGAAA+AGG | + | chr3_4:18671402-18671421 | Msa0493520:intron | 25.0% |
| ! | TGTTTATGTATTCCAGAAAA+GGG | + | chr3_4:18671403-18671422 | Msa0493520:intron | 25.0% |
| ! | AAGTAGTTAAATACACCTTA+AGG | - | chr3_4:18672002-18672021 | None:intergenic | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | + | chr3_4:18672044-18672063 | Msa0493520:intron | 25.0% |
| ! | TCAAATTTCAATCCAGATAT+AGG | + | chr3_4:18672177-18672196 | Msa0493520:intron | 25.0% |
| ! | TGTATAACTGGATAATGTAT+AGG | + | chr3_4:18672266-18672285 | Msa0493520:intron | 25.0% |
| ! | AGTATAGCTAGAATGATTAA+TGG | - | chr3_4:18672534-18672553 | None:intergenic | 25.0% |
| ! | AATTCAGGAACATTAAACTT+AGG | - | chr3_4:18672762-18672781 | None:intergenic | 25.0% |
| !! | ACTTTAGAAAATGCAATGAA+AGG | - | chr3_4:18673298-18673317 | None:intergenic | 25.0% |
| !! | CTAAAGTTCATCTTTTATGA+TGG | + | chr3_4:18673347-18673366 | Msa0493520:intron | 25.0% |
| ! | ATTGTACTACTTCTTATTGT+TGG | + | chr3_4:18673489-18673508 | Msa0493520:intron | 25.0% |
| ! | TCAACAACATTTATACATGA+AGG | - | chr3_4:18673521-18673540 | None:intergenic | 25.0% |
| !!! | AAATTCTAAAGTTGTTTGAG+AGG | + | chr3_4:18673584-18673603 | Msa0493520:intron | 25.0% |
| ! | TAACTTAGTTGTCAATGAAA+GGG | - | chr3_4:18673830-18673849 | None:intergenic | 25.0% |
| ! | ATAACTTAGTTGTCAATGAA+AGG | - | chr3_4:18673831-18673850 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr3_4:18674005-18674024 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr3_4:18674622-18674641 | None:intergenic | 25.0% |
| !! | AAGTACACAACTTAGAATTT+TGG | + | chr3_4:18674179-18674198 | Msa0493520:intron | 25.0% |
| !! | AGTACACAACTTAGAATTTT+GGG | + | chr3_4:18674180-18674199 | Msa0493520:intron | 25.0% |
| ! | GAAATCGTTAATATTATAGG+GGG | - | chr3_4:18674219-18674238 | None:intergenic | 25.0% |
| !! | CCCTGTAATTTGAAAATTTT+TGG | + | chr3_4:18674277-18674296 | Msa0493520:intron | 25.0% |
| ! | TACAAAATCAATGATATGAC+AGG | + | chr3_4:18674326-18674345 | Msa0493520:intron | 25.0% |
| ! | CTTGTAATTTGAGAAAATTC+TGG | - | chr3_4:18674359-18674378 | None:intergenic | 25.0% |
| !! | CAGAATTTTCTCAAATTACA+AGG | + | chr3_4:18674357-18674376 | Msa0493520:intron | 25.0% |
| !! | GAATTTTCTCAAATTACAAG+GGG | + | chr3_4:18674359-18674378 | Msa0493520:intron | 25.0% |
| ! | TCTACTTACTTCTGTATATA+TGG | - | chr3_4:18674553-18674572 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr3_4:18674696-18674715 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3_4:18674622-18674641 | Msa0493520:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr3_4:18674696-18674715 | Msa0493520:intron | 25.0% |
| !!! | TTTTTGATAATGCTAGTTAG+TGG | - | chr3_4:18674787-18674806 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCATCGAAAAGA+TGG | + | chr3_4:18675128-18675147 | Msa0493520:intron | 25.0% |
| !! | AGGATAAAAGATTGTCTTTT+TGG | + | chr3_4:18675172-18675191 | Msa0493520:intron | 25.0% |
| ! | AAGATATACTATAGTATGGT+TGG | - | chr3_4:18675950-18675969 | None:intergenic | 25.0% |
| ! | CAGAAAGATATACTATAGTA+TGG | - | chr3_4:18675954-18675973 | None:intergenic | 25.0% |
| ! | ATGATTGTAGTTATATTGTC+AGG | + | chr3_4:18676041-18676060 | Msa0493520:CDS | 25.0% |
| !! | TTTGGTAGTTCATAAATCTT+AGG | - | chr3_4:18676167-18676186 | None:intergenic | 25.0% |
| !! | GAAGACAACTCAAATATTTT+AGG | - | chr3_4:18676224-18676243 | None:intergenic | 25.0% |
| AAAACCTAACACAATGGTTT+CGG | + | chr3_4:18669757-18669776 | Msa0493520:CDS | 30.0% | |
| ! | GATTTCTGGATTGTCAAAAT+CGG | + | chr3_4:18669862-18669881 | Msa0493520:CDS | 30.0% |
| ! | AGGTAGTTGATTAATTTGAG+GGG | - | chr3_4:18670017-18670036 | None:intergenic | 30.0% |
| TATGGACGATTACCTAAAAT+AGG | - | chr3_4:18670091-18670110 | None:intergenic | 30.0% | |
| !! | TTAGGATTAGTTCCAACTTA+TGG | - | chr3_4:18670109-18670128 | None:intergenic | 30.0% |
| TGATGAATTCAAGAATGACA+TGG | - | chr3_4:18670271-18670290 | None:intergenic | 30.0% | |
| CATCAATAAGTAGTAGTACA+AGG | - | chr3_4:18670324-18670343 | None:intergenic | 30.0% | |
| CTTGTACTACTACTTATTGA+TGG | + | chr3_4:18670322-18670341 | Msa0493520:intron | 30.0% | |
| TCAACAACACATATACATGA+AGG | - | chr3_4:18670354-18670373 | None:intergenic | 30.0% | |
| ATTAGGAACTCAAAATTTGG+AGG | - | chr3_4:18670438-18670457 | None:intergenic | 30.0% | |
| CGACATTGCATAATTTATAC+AGG | + | chr3_4:18670712-18670731 | Msa0493520:intron | 30.0% | |
| CAATTAAATGTGGAGAAATG+AGG | - | chr3_4:18670761-18670780 | None:intergenic | 30.0% | |
| ATAGTAGTCTAAGTATTTGG+TGG | - | chr3_4:18671018-18671037 | None:intergenic | 30.0% | |
| AGGAACTTTGGTTAATATTG+TGG | - | chr3_4:18671153-18671172 | None:intergenic | 30.0% | |
| GGTTCTTTGTAAAAACTTAC+TGG | + | chr3_4:18671180-18671199 | Msa0493520:intron | 30.0% | |
| GTTGTGATAAAGTTCATCTT+AGG | - | chr3_4:18671279-18671298 | None:intergenic | 30.0% | |
| GAGAAAATTGTATTCTCTAG+AGG | - | chr3_4:18671312-18671331 | None:intergenic | 30.0% | |
| ! | GTTTATTCTTTACCCTTTTC+TGG | - | chr3_4:18671418-18671437 | None:intergenic | 30.0% |
| ! | ATACGACATAATTTGGCTTA+TGG | + | chr3_4:18671724-18671743 | Msa0493520:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | + | chr3_4:18672043-18672062 | Msa0493520:intron | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | - | chr3_4:18672050-18672069 | None:intergenic | 30.0% |
| ! | ATTAATATATGGGGTTTGCT+AGG | - | chr3_4:18672075-18672094 | None:intergenic | 30.0% |
| TAGCAAACCCCATATATTAA+TGG | + | chr3_4:18672074-18672093 | Msa0493520:intron | 30.0% | |
| AGCAAACCCCATATATTAAT+GGG | + | chr3_4:18672075-18672094 | Msa0493520:intron | 30.0% | |
| ! | GGTATTTAACTAATTTGTGC+TGG | + | chr3_4:18672096-18672115 | Msa0493520:intron | 30.0% |
| TTGGTTAACTAACCTATATC+TGG | - | chr3_4:18672192-18672211 | None:intergenic | 30.0% | |
| AACTAAAAATGTGCAAGCAA+GGG | - | chr3_4:18672342-18672361 | None:intergenic | 30.0% | |
| TGACAAATTGATGTAAGTCA+TGG | - | chr3_4:18672499-18672518 | None:intergenic | 30.0% | |
| !! | AAGAGTATTACAATGGTTGT+CGG | + | chr3_4:18672561-18672580 | Msa0493520:intron | 30.0% |
| ! | ATAGGTGGAAAATCAAGTTT+TGG | - | chr3_4:18672624-18672643 | None:intergenic | 30.0% |
| TTAGGTAATTCAGGAATCTT+AGG | - | chr3_4:18672663-18672682 | None:intergenic | 30.0% | |
| !! | AATTTCTGGCATAGACAATT+CGG | - | chr3_4:18672880-18672899 | None:intergenic | 30.0% |
| AATTTAGGTAAGTCGAACTT+TGG | - | chr3_4:18672921-18672940 | None:intergenic | 30.0% | |
| AATTCAGGGGGATTAAATTT+AGG | - | chr3_4:18672936-18672955 | None:intergenic | 30.0% | |
| ! | ACTTTAGGTAGTTCATGTTT+TGG | - | chr3_4:18672993-18673012 | None:intergenic | 30.0% |
| AAGGAATTAGTTCCAACTTA+AGG | - | chr3_4:18673279-18673298 | None:intergenic | 30.0% | |
| TATGTTGTAGATCACAGTTA+TGG | + | chr3_4:18673408-18673427 | Msa0493520:intron | 30.0% | |
| CATTCATTTAATGATGCACA+TGG | + | chr3_4:18674040-18674059 | Msa0493520:intron | 30.0% | |
| TGTACAGTCAAAATTCATGA+AGG | - | chr3_4:18674310-18674329 | None:intergenic | 30.0% | |
| AAAATCAATGATATGACAGG+AGG | + | chr3_4:18674329-18674348 | Msa0493520:intron | 30.0% | |
| CTGAAATCGCTAATATTACA+GGG | + | chr3_4:18674470-18674489 | Msa0493520:intron | 30.0% | |
| TGAAATCGCTAATATTACAG+GGG | + | chr3_4:18674471-18674490 | Msa0493520:intron | 30.0% | |
| ! | TCAAACATTGCTTGTTAACA+AGG | + | chr3_4:18674829-18674848 | Msa0493520:intron | 30.0% |
| ! | TTAGCCTTTGTTCGAATTTA+TGG | + | chr3_4:18674869-18674888 | Msa0493520:intron | 30.0% |
| !!! | TGTCTTTTTGGCTTACATTT+TGG | + | chr3_4:18675184-18675203 | Msa0493520:intron | 30.0% |
| !!! | GTCTTTTTGGCTTACATTTT+GGG | + | chr3_4:18675185-18675204 | Msa0493520:intron | 30.0% |
| ! | TGAGTTTATCTCAGTTGATA+TGG | + | chr3_4:18675324-18675343 | Msa0493520:intron | 30.0% |
| !!! | TTTTTTTTTTATGTGGTGGC+CGG | - | chr3_4:18675387-18675406 | None:intergenic | 30.0% |
| ! | CTCATGCGCAAAAAAAATTT+TGG | + | chr3_4:18675548-18675567 | Msa0493520:intron | 30.0% |
| !! | TTGATGGATGATCGTAATTT+TGG | + | chr3_4:18675604-18675623 | Msa0493520:intron | 30.0% |
| AAAAGCAATCTTAAAGTCAG+TGG | - | chr3_4:18675766-18675785 | None:intergenic | 30.0% | |
| !! | TGCTTTTTGTTTGAGAACAT+AGG | + | chr3_4:18675779-18675798 | Msa0493520:intron | 30.0% |
| TAGGCTTTCAATGCATATAT+AGG | + | chr3_4:18675798-18675817 | Msa0493520:intron | 30.0% | |
| CTTTCAATGCATATATAGGA+TGG | + | chr3_4:18675802-18675821 | Msa0493520:intron | 30.0% | |
| GAACTACATTGTTATATGTG+AGG | - | chr3_4:18675884-18675903 | None:intergenic | 30.0% | |
| TTATCATCTTGATTCAACCA+TGG | + | chr3_4:18675983-18676002 | Msa0493520:intron | 30.0% | |
| ! | AGAGATGGAAAATCAAGTTT+TGG | - | chr3_4:18676128-18676147 | None:intergenic | 30.0% |
| ! | GATTCTGGTATTTCTAACTT+TGG | - | chr3_4:18676185-18676204 | None:intergenic | 30.0% |
| TTCAAAACCAAGAACAACAT+TGG | + | chr3_4:18676270-18676289 | Msa0493520:CDS | 30.0% | |
| AAACCTAACACAATGGTTTC+GGG | + | chr3_4:18669758-18669777 | Msa0493520:CDS | 35.0% | |
| !!! | AAATCAAGTTTTGGAAGCTG+AGG | - | chr3_4:18669812-18669831 | None:intergenic | 35.0% |
| ! | AGAGGTGGAAAATCAAGTTT+TGG | - | chr3_4:18669821-18669840 | None:intergenic | 35.0% |
| CATGGACTTCTTAAGATTTC+TGG | + | chr3_4:18669848-18669867 | Msa0493520:CDS | 35.0% | |
| !! | ACCTTAAGCAACTCTTGTTT+TGG | - | chr3_4:18669944-18669963 | None:intergenic | 35.0% |
| ! | ACTATACCTGGACCTATTTT+AGG | + | chr3_4:18670076-18670095 | Msa0493520:intron | 35.0% |
| TTAGGTAATCGTCCATAAGT+TGG | + | chr3_4:18670094-18670113 | Msa0493520:intron | 35.0% | |
| CGAGACAATGCAATGAAATT+AGG | - | chr3_4:18670127-18670146 | None:intergenic | 35.0% | |
| TAGCCAATAAAATCTCAGTC+TGG | + | chr3_4:18670157-18670176 | Msa0493520:intron | 35.0% | |
| ! | TCTTGCTCTCTAGAAATGAA+AGG | + | chr3_4:18670468-18670487 | Msa0493520:intron | 35.0% |
| GAAAGGAATAATTAGGTGGT+TGG | + | chr3_4:18670485-18670504 | Msa0493520:intron | 35.0% | |
| ! | GTTTGGTCTTTGTAGGATAT+TGG | - | chr3_4:18670527-18670546 | None:intergenic | 35.0% |
| ! | CCAAAATGTTTGGTCTTTGT+AGG | - | chr3_4:18670534-18670553 | None:intergenic | 35.0% |
| ! | CCTACAAAGACCAAACATTT+TGG | + | chr3_4:18670531-18670550 | Msa0493520:intron | 35.0% |
| AATCTAACATTTGGCTAGAC+CGG | - | chr3_4:18670617-18670636 | None:intergenic | 35.0% | |
| ACCAACTGAATTAAGCTCAT+GGG | - | chr3_4:18670690-18670709 | None:intergenic | 35.0% | |
| TACCAACTGAATTAAGCTCA+TGG | - | chr3_4:18670691-18670710 | None:intergenic | 35.0% | |
| AGAGCTCACACAATTAAATG+TGG | - | chr3_4:18670771-18670790 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTCTAGTAGCCTAG+TGG | - | chr3_4:18670796-18670815 | None:intergenic | 35.0% |
| TTTCCTTAACAATGTCTCAG+AGG | + | chr3_4:18670881-18670900 | Msa0493520:intron | 35.0% | |
| GTTCCTCTTAATTCATCAAG+TGG | + | chr3_4:18671116-18671135 | Msa0493520:intron | 35.0% | |
| GTACCACTTGATGAATTAAG+AGG | - | chr3_4:18671122-18671141 | None:intergenic | 35.0% | |
| CTTAATTCATCAAGTGGTAC+TGG | + | chr3_4:18671122-18671141 | Msa0493520:intron | 35.0% | |
| TTTACAAAGAACCAGTGAAG+AGG | - | chr3_4:18671173-18671192 | None:intergenic | 35.0% | |
| ATGTGAATATGTATGCAGTC+AGG | + | chr3_4:18671233-18671252 | Msa0493520:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr3_4:18671957-18671976 | Msa0493520:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | - | chr3_4:18671963-18671982 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAGCTACACCTTA+AGG | + | chr3_4:18671984-18672003 | Msa0493520:intron | 35.0% |
| CAACTAAAAATGTGCAAGCA+AGG | - | chr3_4:18672343-18672362 | None:intergenic | 35.0% | |
| GACAACCATTGTAATACTCT+TGG | - | chr3_4:18672562-18672581 | None:intergenic | 35.0% | |
| ! | AGAGTATTACAATGGTTGTC+GGG | + | chr3_4:18672562-18672581 | Msa0493520:intron | 35.0% |
| !!! | AAATCAAGTTTTGGAACCTC+AGG | - | chr3_4:18672615-18672634 | None:intergenic | 35.0% |
| !! | AATTCTGGCTTAGGTAATTC+AGG | - | chr3_4:18672672-18672691 | None:intergenic | 35.0% |
| ACATTAAACTTAGGTAGCTC+AGG | - | chr3_4:18672753-18672772 | None:intergenic | 35.0% | |
| ACTTTAGGTAGCTCATGTTT+GGG | - | chr3_4:18672855-18672874 | None:intergenic | 35.0% | |
| !! | ATTTCTGGCATAGACAATTC+GGG | - | chr3_4:18672879-18672898 | None:intergenic | 35.0% |
| TAAGTCGAACTTTGGCAATT+CGG | - | chr3_4:18672913-18672932 | None:intergenic | 35.0% | |
| !!! | GTTCATGTTTTGGCAATTCA+GGG | - | chr3_4:18672983-18673002 | None:intergenic | 35.0% |
| !!! | AGTTCATGTTTTGGCAATTC+AGG | - | chr3_4:18672984-18673003 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+AGG | - | chr3_4:18673074-18673093 | None:intergenic | 35.0% |
| !! | ACCTTTGGTATTTCTGGTTT+GGG | - | chr3_4:18673125-18673144 | None:intergenic | 35.0% |
| !! | TACCTTTGGTATTTCTGGTT+TGG | - | chr3_4:18673126-18673145 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+TGG | - | chr3_4:18673074-18673093 | None:intergenic | 35.0% |
| !! | AACTCTAGCTTTGGTAATTC+AGG | - | chr3_4:18673149-18673168 | None:intergenic | 35.0% |
| TTTACCAATTCAGGTACCTT+AGG | - | chr3_4:18673173-18673192 | None:intergenic | 35.0% | |
| ACATTAACTTTAGGTAGTCC+AGG | - | chr3_4:18673197-18673216 | None:intergenic | 35.0% | |
| AGTTCAGGGACATTAACTTT+AGG | - | chr3_4:18673206-18673225 | None:intergenic | 35.0% | |
| ! | GAACATCTTTAGGAGTTTCA+GGG | - | chr3_4:18673245-18673264 | None:intergenic | 35.0% |
| !! | GTATTGGTTGGAACATCTTT+AGG | - | chr3_4:18673255-18673274 | None:intergenic | 35.0% |
| ! | AGTTCCAACTTAAGGAGTAT+TGG | - | chr3_4:18673271-18673290 | None:intergenic | 35.0% |
| TTAGTTGAGGAAAATCATGC+AGG | - | chr3_4:18673942-18673961 | None:intergenic | 35.0% | |
| TTGCTTATATTAATGACCGG+AGG | + | chr3_4:18674117-18674136 | Msa0493520:intron | 35.0% | |
| TGCTTATATTAATGACCGGA+GGG | + | chr3_4:18674118-18674137 | Msa0493520:intron | 35.0% | |
| ! | TTGATTTTGGACCTTCATGA+AGG | - | chr3_4:18674393-18674412 | None:intergenic | 35.0% |
| CCTGTAATATTAGCGATTTC+AGG | - | chr3_4:18674472-18674491 | None:intergenic | 35.0% | |
| CCTGAAATCGCTAATATTAC+AGG | + | chr3_4:18674469-18674488 | Msa0493520:intron | 35.0% | |
| GAAATCGCTAATATTACAGG+GGG | + | chr3_4:18674472-18674491 | Msa0493520:intron | 35.0% | |
| TAAGTAGATAATACACCCTC+CGG | + | chr3_4:18674565-18674584 | Msa0493520:intron | 35.0% | |
| AACGCCATAAATTCGAACAA+AGG | - | chr3_4:18674876-18674895 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTATGTGGTGGCC+GGG | - | chr3_4:18675386-18675405 | None:intergenic | 35.0% |
| ! | GATGTGATGACATCTTTTGA+TGG | + | chr3_4:18675588-18675607 | Msa0493520:intron | 35.0% |
| ! | ATGGATGATCGTAATTTTGG+TGG | + | chr3_4:18675607-18675626 | Msa0493520:intron | 35.0% |
| AACTTTAGATGAACTCCAAG+TGG | - | chr3_4:18675693-18675712 | None:intergenic | 35.0% | |
| !! | AAACCTAACACATTGGTTTC+TGG | + | chr3_4:18676065-18676084 | Msa0493520:CDS | 35.0% |
| !! | AACCTAACACATTGGTTTCT+GGG | + | chr3_4:18676066-18676085 | Msa0493520:CDS | 35.0% |
| !!! | AAATCAAGTTTTGGAAGCTG+AGG | - | chr3_4:18669812-18669831 | None:intergenic | 35.0% |
| !!! | AACTCTAGTTTTGACGATTC+TGG | - | chr3_4:18676200-18676219 | None:intergenic | 35.0% |
| TTAGGAACCAATGTTGTTCT+TGG | - | chr3_4:18676280-18676299 | None:intergenic | 35.0% | |
| GTCAGGAAAACCTAACACAA+TGG | + | chr3_4:18669751-18669770 | Msa0493520:CDS | 40.0% | |
| AACCTAACACAATGGTTTCG+GGG | + | chr3_4:18669759-18669778 | Msa0493520:CDS | 40.0% | |
| TTTGGAAGCTGAGGTATGTT+TGG | - | chr3_4:18669803-18669822 | None:intergenic | 40.0% | |
| ATTACTGGCACAAACAACTC+AGG | - | chr3_4:18669902-18669921 | None:intergenic | 40.0% | |
| GTTTGTGCCAGTAATACCAA+AGG | + | chr3_4:18669907-18669926 | Msa0493520:intron | 40.0% | |
| ! | TGAGGTACCTTTGGTATTAC+TGG | - | chr3_4:18669917-18669936 | None:intergenic | 40.0% |
| !!! | AACTCTTGTTTTGGCAGTTG+AGG | - | chr3_4:18669935-18669954 | None:intergenic | 40.0% |
| GCCAAAACAAGAGTTGCTTA+AGG | + | chr3_4:18669940-18669959 | Msa0493520:CDS | 40.0% | |
| CATGAGCTAATTGAAATCCC+AGG | + | chr3_4:18669980-18669999 | Msa0493520:CDS | 40.0% | |
| ! | TGATTAATTTGAGGGGTTCC+AGG | - | chr3_4:18670010-18670029 | None:intergenic | 40.0% |
| CGATTACCTAAAATAGGTCC+AGG | - | chr3_4:18670085-18670104 | None:intergenic | 40.0% | |
| CAATAAAATCTCAGTCTGGC+CGG | + | chr3_4:18670161-18670180 | Msa0493520:intron | 40.0% | |
| AATAGGCATGCCAATCGATT+GGG | + | chr3_4:18670587-18670606 | Msa0493520:intron | 40.0% | |
| CCAACTGAATTAAGCTCATG+GGG | - | chr3_4:18670689-18670708 | None:intergenic | 40.0% | |
| CATAATTTATACAGGGGCCA+GGG | + | chr3_4:18670720-18670739 | Msa0493520:intron | 40.0% | |
| ! | ATGTGGAGAAATGAGGTGTT+CGG | - | chr3_4:18670754-18670773 | None:intergenic | 40.0% |
| TAACCAAAGTTCCTCTTCAC+TGG | + | chr3_4:18671159-18671178 | Msa0493520:intron | 40.0% | |
| TAAAAACTTACTGGAGCCTC+AGG | + | chr3_4:18671189-18671208 | Msa0493520:intron | 40.0% | |
| ATTATAGGGGCAATGTTCTG+CGG | + | chr3_4:18671626-18671645 | Msa0493520:intron | 40.0% | |
| ! | GTATCTTTTGACGTCCTTCT+TGG | + | chr3_4:18671805-18671824 | Msa0493520:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr3_4:18671956-18671975 | Msa0493520:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | - | chr3_4:18671964-18671983 | None:intergenic | 40.0% | |
| TTACGCTTCCATGGTTCAAT+TGG | + | chr3_4:18672119-18672138 | Msa0493520:intron | 40.0% | |
| TCTCAAAGCCAATTGAACCA+TGG | - | chr3_4:18672130-18672149 | None:intergenic | 40.0% | |
| !! | GTCAGCCAAGAGTATTACAA+TGG | + | chr3_4:18672554-18672573 | Msa0493520:intron | 40.0% |
| GAGTATTACAATGGTTGTCG+GGG | + | chr3_4:18672563-18672582 | Msa0493520:intron | 40.0% | |
| ACCTAAGCCAGAATTACCTA+AGG | + | chr3_4:18672677-18672696 | Msa0493520:CDS | 40.0% | |
| !! | ACCTTAGGTAATTCTGGCTT+AGG | - | chr3_4:18672681-18672700 | None:intergenic | 40.0% |
| TCAGGTACCTTAGGTAATTC+TGG | - | chr3_4:18672687-18672706 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGTACCTT+AGG | - | chr3_4:18672696-18672715 | None:intergenic | 40.0% | |
| !! | AATTCTGGCTTTGGCAATTC+AGG | - | chr3_4:18672705-18672724 | None:intergenic | 40.0% |
| !! | ACCTTAGGTAATTCTGGCTT+TGG | - | chr3_4:18672681-18672700 | None:intergenic | 40.0% |
| TCAGGTACCTTAGGTAATTC+TGG | - | chr3_4:18672687-18672706 | None:intergenic | 40.0% | |
| TTTGGAAGTTCAGGTACCTT+AGG | - | chr3_4:18672729-18672748 | None:intergenic | 40.0% | |
| TTAGGCAACTCAGGAACTTT+GGG | - | chr3_4:18672801-18672820 | None:intergenic | 40.0% | |
| TTTAGGCAACTCAGGAACTT+TGG | - | chr3_4:18672802-18672821 | None:intergenic | 40.0% | |
| GACTTTAGGTAGCTCATGTT+TGG | - | chr3_4:18672856-18672875 | None:intergenic | 40.0% | |
| ATAGACAATTCGGGGACTTT+AGG | - | chr3_4:18672870-18672889 | None:intergenic | 40.0% | |
| ! | TTTCTGGCATAGACAATTCG+GGG | - | chr3_4:18672878-18672897 | None:intergenic | 40.0% |
| !! | TCGGGTATCTTTGGAATTTC+TGG | - | chr3_4:18672894-18672913 | None:intergenic | 40.0% |
| TTTGGCAATTCGGGTATCTT+TGG | - | chr3_4:18672903-18672922 | None:intergenic | 40.0% | |
| AAGTCGAACTTTGGCAATTC+GGG | - | chr3_4:18672912-18672931 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGGACTTT+AGG | - | chr3_4:18672975-18672994 | None:intergenic | 40.0% | |
| ! | ACCTTAGGGATATCTGGTTT+GGG | - | chr3_4:18673026-18673045 | None:intergenic | 40.0% |
| TACCTTAGGGATATCTGGTT+TGG | - | chr3_4:18673027-18673046 | None:intergenic | 40.0% | |
| ! | TTGGTAACTCAGGTACCTTA+GGG | - | chr3_4:18673040-18673059 | None:intergenic | 40.0% |
| ! | TTTGGTAACTCAGGTACCTT+AGG | - | chr3_4:18673041-18673060 | None:intergenic | 40.0% |
| TTCAGGTACCTTAGGTAGTT+CGG | - | chr3_4:18673066-18673085 | None:intergenic | 40.0% | |
| !! | AGCTCAGGTTTTGGTAATTC+AGG | - | chr3_4:18673083-18673102 | None:intergenic | 40.0% |
| !! | ACTTTTGGTAGCTCAGGTTT+TGG | - | chr3_4:18673092-18673111 | None:intergenic | 40.0% |
| TCAGGTACCTTTGGTATTTC+TGG | - | chr3_4:18673131-18673150 | None:intergenic | 40.0% | |
| ACCAAAGCTAGAGTTACCTA+AGG | + | chr3_4:18673154-18673173 | Msa0493520:CDS | 40.0% | |
| ! | ACCTTAGGTAACTCTAGCTT+TGG | - | chr3_4:18673158-18673177 | None:intergenic | 40.0% |
| ! | GTTACCTAAGGTACCTGAAT+TGG | + | chr3_4:18673166-18673185 | Msa0493520:CDS | 40.0% |
| ! | TTTCAGGGTAACTTGGGTTT+TGG | - | chr3_4:18673230-18673249 | None:intergenic | 40.0% |
| TAGGAGTTTCAGGGTAACTT+GGG | - | chr3_4:18673236-18673255 | None:intergenic | 40.0% | |
| TTAGGAGTTTCAGGGTAACT+TGG | - | chr3_4:18673237-18673256 | None:intergenic | 40.0% | |
| ! | GGAACATCTTTAGGAGTTTC+AGG | - | chr3_4:18673246-18673265 | None:intergenic | 40.0% |
| !! | CCAACTTAAGGAGTATTGGT+TGG | - | chr3_4:18673267-18673286 | None:intergenic | 40.0% |
| CCAACCAATACTCCTTAAGT+TGG | + | chr3_4:18673264-18673283 | Msa0493520:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr3_4:18674001-18674020 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr3_4:18674002-18674021 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr3_4:18674700-18674719 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr3_4:18674699-18674718 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr3_4:18674699-18674718 | Msa0493520:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr3_4:18674700-18674719 | Msa0493520:intron | 40.0% | |
| TTAGTGGTAGCAGTAGATTG+AGG | - | chr3_4:18674771-18674790 | None:intergenic | 40.0% | |
| TCAACTGAGATAAACTCACG+AGG | - | chr3_4:18675322-18675341 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTATGTGGTGGCCG+GGG | - | chr3_4:18675385-18675404 | None:intergenic | 40.0% |
| ! | GTAAATGCTTGTTGAGCTTG+AGG | + | chr3_4:18675648-18675667 | Msa0493520:intron | 40.0% |
| CGTAACTAGCAGAACTGTAT+AGG | - | chr3_4:18675743-18675762 | None:intergenic | 40.0% | |
| TGACAAAGAAATGCAAGCCA+TGG | - | chr3_4:18676003-18676022 | None:intergenic | 40.0% | |
| GTCAGGAAAACCTAACACAT+TGG | + | chr3_4:18676058-18676077 | Msa0493520:CDS | 40.0% | |
| !! | ACCTAACACATTGGTTTCTG+GGG | + | chr3_4:18676067-18676086 | Msa0493520:CDS | 40.0% |
| AGTTCATGCTTTGCTAGAGA+TGG | - | chr3_4:18676143-18676162 | None:intergenic | 40.0% | |
| ACCTAACACAATGGTTTCGG+GGG | + | chr3_4:18669760-18669779 | Msa0493520:CDS | 45.0% | |
| TTTCCACCTCTAGCAAAGCA+TGG | + | chr3_4:18669830-18669849 | Msa0493520:CDS | 45.0% | |
| AGAAGTCCATGCTTTGCTAG+AGG | - | chr3_4:18669839-18669858 | None:intergenic | 45.0% | |
| ! | TTTGGCAGTTGAGGTACCTT+TGG | - | chr3_4:18669926-18669945 | None:intergenic | 45.0% |
| TCCAGGTATAGTAACAGCGA+CGG | - | chr3_4:18670068-18670087 | None:intergenic | 45.0% | |
| ! | CGGCCAGACTGAGATTTTAT+TGG | - | chr3_4:18670163-18670182 | None:intergenic | 45.0% |
| GCGGATCATGCCAAAATGTT+TGG | - | chr3_4:18670544-18670563 | None:intergenic | 45.0% | |
| ! | ATTGACTCACATCCAAGGGT+GGG | + | chr3_4:18670564-18670583 | Msa0493520:intron | 45.0% |
| GAATAGGCATGCCAATCGAT+TGG | + | chr3_4:18670586-18670605 | Msa0493520:intron | 45.0% | |
| ATAGGCATGCCAATCGATTG+GGG | + | chr3_4:18670588-18670607 | Msa0493520:intron | 45.0% | |
| CCCCATGAGCTTAATTCAGT+TGG | + | chr3_4:18670686-18670705 | Msa0493520:intron | 45.0% | |
| GCATAATTTATACAGGGGCC+AGG | + | chr3_4:18670719-18670738 | Msa0493520:intron | 45.0% | |
| ! | TGTGGAGAAATGAGGTGTTC+GGG | - | chr3_4:18670753-18670772 | None:intergenic | 45.0% |
| !! | GTGCCTCTGAGACATTGTTA+AGG | - | chr3_4:18670887-18670906 | None:intergenic | 45.0% |
| GAACCAGTGAAGAGGAACTT+TGG | - | chr3_4:18671165-18671184 | None:intergenic | 45.0% | |
| CTGAAGATATTCCTGTCCTG+AGG | - | chr3_4:18671208-18671227 | None:intergenic | 45.0% | |
| CTCAGGACAGGAATATCTTC+AGG | + | chr3_4:18671206-18671225 | Msa0493520:intron | 45.0% | |
| AGAAACCCCTTATCAGCACA+AGG | - | chr3_4:18671835-18671854 | None:intergenic | 45.0% | |
| ! | TCTAGAGTCGAACATACCTG+AGG | + | chr3_4:18672596-18672615 | Msa0493520:CDS | 45.0% |
| ATCTTAGGAAGCTCAGGCTT+TGG | - | chr3_4:18672648-18672667 | None:intergenic | 45.0% | |
| TCAGGAATCTTAGGAAGCTC+AGG | - | chr3_4:18672654-18672673 | None:intergenic | 45.0% | |
| GCCAAAGCCAGAATTACCTA+AGG | + | chr3_4:18672710-18672729 | Msa0493520:intron | 45.0% | |
| AACTTAGGTAGCTCAGGCTT+TGG | - | chr3_4:18672747-18672766 | None:intergenic | 45.0% | |
| !! | AACTCGGGTTTTGGCAATTC+AGG | - | chr3_4:18672777-18672796 | None:intergenic | 45.0% |
| !! | ACTTTGGGAAACTCGGGTTT+TGG | - | chr3_4:18672786-18672805 | None:intergenic | 45.0% |
| ! | TCAGGAACTTTGGGAAACTC+GGG | - | chr3_4:18672792-18672811 | None:intergenic | 45.0% |
| ! | CTCAGGAACTTTGGGAAACT+CGG | - | chr3_4:18672793-18672812 | None:intergenic | 45.0% |
| TTAGGCAACTCGGGAACTTT+AGG | - | chr3_4:18672819-18672838 | None:intergenic | 45.0% | |
| TTCAGGGAACTTAGGCAACT+CGG | - | chr3_4:18672829-18672848 | None:intergenic | 45.0% | |
| TTGGGCAATTCAGGGAACTT+AGG | - | chr3_4:18672837-18672856 | None:intergenic | 45.0% | |
| GCTCATGTTTGGGCAATTCA+GGG | - | chr3_4:18672845-18672864 | None:intergenic | 45.0% | |
| AGCTCATGTTTGGGCAATTC+AGG | - | chr3_4:18672846-18672865 | None:intergenic | 45.0% | |
| !! | TCGGGTTTTGTCAATTCAGG+GGG | - | chr3_4:18672948-18672967 | None:intergenic | 45.0% |
| !! | CTCGGGTTTTGTCAATTCAG+GGG | - | chr3_4:18672949-18672968 | None:intergenic | 45.0% |
| !! | GCTCGGGTTTTGTCAATTCA+GGG | - | chr3_4:18672950-18672969 | None:intergenic | 45.0% |
| TTGGGCAACTCAGAGACTTT+AGG | - | chr3_4:18673008-18673027 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGGATATC+TGG | - | chr3_4:18673032-18673051 | None:intergenic | 45.0% | |
| !! | AGTTCGGGTTTTGGTAACTC+AGG | - | chr3_4:18673050-18673069 | None:intergenic | 45.0% |
| ACCAAAACCCGAACTACCTA+AGG | + | chr3_4:18673055-18673074 | Msa0493520:CDS | 45.0% | |
| !! | ACCTTAGGTAGTTCGGGTTT+TGG | - | chr3_4:18673059-18673078 | None:intergenic | 45.0% |
| TCAGGTACCTTAGGTAGTTC+GGG | - | chr3_4:18673065-18673084 | None:intergenic | 45.0% | |
| !! | TCAGAGACTTTTGGTAGCTC+AGG | - | chr3_4:18673098-18673117 | None:intergenic | 45.0% |
| ! | TTGGGCAACTCAGAGACTTT+TGG | - | chr3_4:18673008-18673027 | None:intergenic | 45.0% |
| GCCCAAACCAGAAATACCAA+AGG | + | chr3_4:18673121-18673140 | Msa0493520:CDS | 45.0% | |
| GTACCTGAATTGGTAAAGCC+TGG | + | chr3_4:18673176-18673195 | Msa0493520:CDS | 45.0% | |
| AGTCCAGGCTTTACCAATTC+AGG | - | chr3_4:18673182-18673201 | None:intergenic | 45.0% | |
| !! | ACTTGGGTTTTGGCAGTTCA+GGG | - | chr3_4:18673220-18673239 | None:intergenic | 45.0% |
| !! | AACTTGGGTTTTGGCAGTTC+AGG | - | chr3_4:18673221-18673240 | None:intergenic | 45.0% |
| AGAAAGTTGTGTACACCCTC+CGG | - | chr3_4:18674136-18674155 | None:intergenic | 45.0% | |
| !! | GGGAGAAAGTACCTTCATGA+AGG | + | chr3_4:18674379-18674398 | Msa0493520:intron | 45.0% |
| ATTTAACCACACGCAACACG+TGG | + | chr3_4:18674527-18674546 | Msa0493520:intron | 45.0% | |
| AACTTGGGAAATACACCCTC+CGG | - | chr3_4:18674718-18674737 | None:intergenic | 45.0% | |
| AAAGTCCAGAGTTCAAACCC+CGG | + | chr3_4:18675365-18675384 | Msa0493520:intron | 45.0% | |
| TGAACTCCAAGTGGTCATCA+GGG | - | chr3_4:18675684-18675703 | None:intergenic | 45.0% | |
| ATGAACTCCAAGTGGTCATC+AGG | - | chr3_4:18675685-18675704 | None:intergenic | 45.0% | |
| !! | TATTATTTATTTATATTGAA+TGG | - | chr3_4:18673713-18673732 | None:intergenic | 5.0% |
| !! | TTAAATAAATAAAAAATCTA+TGG | - | chr3_4:18674513-18674532 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTATG+TGG | - | chr3_4:18675394-18675413 | None:intergenic | 5.0% |
| !! | TTGAATTTAATATAATTTAA+CGG | - | chr3_4:18675480-18675499 | None:intergenic | 5.0% |
| !! | AATTATATTAAATTCAATAT+AGG | + | chr3_4:18675483-18675502 | Msa0493520:intron | 5.0% |
| AGTCCATGCTTTGCTAGAGG+TGG | - | chr3_4:18669836-18669855 | None:intergenic | 50.0% | |
| !! | ATTGAAATCCCAGGAGTGCC+TGG | + | chr3_4:18669989-18670008 | Msa0493520:CDS | 50.0% |
| ATAGTAACAGCGACGGGATC+AGG | - | chr3_4:18670061-18670080 | None:intergenic | 50.0% | |
| CCAGGTATAGTAACAGCGAC+GGG | - | chr3_4:18670067-18670086 | None:intergenic | 50.0% | |
| TCAGTCTGGCCGGAAATCAT+GGG | + | chr3_4:18670171-18670190 | Msa0493520:intron | 50.0% | |
| !! | TCCGCATTGACTCACATCCA+AGG | + | chr3_4:18670559-18670578 | Msa0493520:intron | 50.0% |
| CCCTTGGATGTGAGTCAATG+CGG | - | chr3_4:18670563-18670582 | None:intergenic | 50.0% | |
| !! | CCGCATTGACTCACATCCAA+GGG | + | chr3_4:18670560-18670579 | Msa0493520:intron | 50.0% |
| !! | CATTGACTCACATCCAAGGG+TGG | + | chr3_4:18670563-18670582 | Msa0493520:intron | 50.0% |
| TCACATCCAAGGGTGGGAAT+AGG | + | chr3_4:18670570-18670589 | Msa0493520:intron | 50.0% | |
| TGCCAATCGATTGGGGTTTC+CGG | + | chr3_4:18670595-18670614 | Msa0493520:intron | 50.0% | |
| ! | GTGGAGAAATGAGGTGTTCG+GGG | - | chr3_4:18670752-18670771 | None:intergenic | 50.0% |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | + | chr3_4:18670778-18670797 | Msa0493520:intron | 50.0% |
| ! | TGGCACACCTTGTGCTGATA+AGG | + | chr3_4:18671825-18671844 | Msa0493520:intron | 50.0% |
| ! | GGCACACCTTGTGCTGATAA+GGG | + | chr3_4:18671826-18671845 | Msa0493520:intron | 50.0% |
| ! | GCACACCTTGTGCTGATAAG+GGG | + | chr3_4:18671827-18671846 | Msa0493520:intron | 50.0% |
| !! | TTGTGCTGGTTACGCTTCCA+TGG | + | chr3_4:18672110-18672129 | Msa0493520:intron | 50.0% |
| ATGTGCAAGCAAGGGTGAGT+TGG | - | chr3_4:18672334-18672353 | None:intergenic | 50.0% | |
| ! | AGCTCAGGCTTTGGTATAGG+TGG | - | chr3_4:18672639-18672658 | None:intergenic | 50.0% |
| ! | GGAAGCTCAGGCTTTGGTAT+AGG | - | chr3_4:18672642-18672661 | None:intergenic | 50.0% |
| !! | AGCTCAGGCTTTGGAAGTTC+AGG | - | chr3_4:18672738-18672757 | None:intergenic | 50.0% |
| TCGGGAACTTTAGGCAACTC+AGG | - | chr3_4:18672810-18672829 | None:intergenic | 50.0% | |
| TCAGGGAACTTAGGCAACTC+GGG | - | chr3_4:18672828-18672847 | None:intergenic | 50.0% | |
| !! | GGCTCGGGTTTTGTCAATTC+AGG | - | chr3_4:18672951-18672970 | None:intergenic | 50.0% |
| TTCAGGGACTTTAGGTGGCT+CGG | - | chr3_4:18672967-18672986 | None:intergenic | 50.0% | |
| GGCAATTCAGGGACTTTAGG+TGG | - | chr3_4:18672972-18672991 | None:intergenic | 50.0% | |
| GCCCAAACCAGATATCCCTA+AGG | + | chr3_4:18673022-18673041 | Msa0493520:CDS | 50.0% | |
| CCATCCTAAAGTACACCCTC+CGG | + | chr3_4:18673983-18674002 | Msa0493520:intron | 50.0% | |
| CAAGTGGTCATCAGGGTCAA+GGG | - | chr3_4:18675677-18675696 | None:intergenic | 50.0% | |
| GCCCCAGAAACCAATGTGTT+AGG | - | chr3_4:18676071-18676090 | None:intergenic | 50.0% | |
| GCCCCCGAAACCATTGTGTT+AGG | - | chr3_4:18669764-18669783 | None:intergenic | 55.0% | |
| CCCGTCGCTGTTACTATACC+TGG | + | chr3_4:18670064-18670083 | Msa0493520:intron | 55.0% | |
| CTCAGTCTGGCCGGAAATCA+TGG | + | chr3_4:18670170-18670189 | Msa0493520:intron | 55.0% | |
| CAGTCTGGCCGGAAATCATG+GGG | + | chr3_4:18670172-18670191 | Msa0493520:intron | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | - | chr3_4:18670183-18670202 | None:intergenic | 55.0% | |
| GACCGGAAACCCCAATCGAT+TGG | - | chr3_4:18670600-18670619 | None:intergenic | 55.0% | |
| ACTTACTGGAGCCTCAGGAC+AGG | + | chr3_4:18671194-18671213 | Msa0493520:intron | 55.0% | |
| CAGCACAAGGTGTGCCAAGA+AGG | - | chr3_4:18671822-18671841 | None:intergenic | 55.0% | |
| TCAGGGACTTTAGGTGGCTC+GGG | - | chr3_4:18672966-18672985 | None:intergenic | 55.0% | |
| ! | CCGGAGGGTGTACTTTAGGA+TGG | - | chr3_4:18673986-18674005 | None:intergenic | 55.0% |
| ! | GTGACCGGAGGGTGTACTTT+AGG | - | chr3_4:18673990-18674009 | None:intergenic | 55.0% |
| ATATGGCCACGTGTTGCGTG+TGG | - | chr3_4:18674536-18674555 | None:intergenic | 55.0% | |
| CCAAGTGGTCATCAGGGTCA+AGG | - | chr3_4:18675678-18675697 | None:intergenic | 55.0% | |
| CCTTGACCCTGATGACCACT+TGG | + | chr3_4:18675675-18675694 | Msa0493520:intron | 55.0% | |
| TCTGGCCGGAAATCATGGGG+TGG | + | chr3_4:18670175-18670194 | Msa0493520:intron | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | + | chr3_4:18670179-18670198 | Msa0493520:intron | 60.0% | |
| GGCATGCCTATTCCCACCCT+TGG | - | chr3_4:18670579-18670598 | None:intergenic | 60.0% | |
| GAGGGGTTCCAGGCACTCCT+GGG | - | chr3_4:18670000-18670019 | None:intergenic | 65.0% | |
| TGAGGGGTTCCAGGCACTCC+TGG | - | chr3_4:18670001-18670020 | None:intergenic | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | + | chr3_4:18670178-18670197 | Msa0493520:intron | 65.0% | |
| GGTGTTCGGGGTTCGAACCC+TGG | - | chr3_4:18670740-18670759 | None:intergenic | 65.0% | |
| GGTGGCCGGGGTTTGAACTC+TGG | - | chr3_4:18675373-18675392 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 18669695 | 18676322 | 18669695 | ID=Msa0493520;Name=Msa0493520 |
| chr3_4 | mRNA | 18669695 | 18676322 | 18669695 | ID=Msa0493520-mRNA-1;Parent=Msa0493520;Name=Msa0493520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|6|0|420 |
| chr3_4 | exon | 18669695 | 18669916 | 18669695 | ID=Msa0493520-mRNA-1:exon:5118;Parent=Msa0493520-mRNA-1 |
| chr3_4 | exon | 18669929 | 18670072 | 18669929 | ID=Msa0493520-mRNA-1:exon:5119;Parent=Msa0493520-mRNA-1 |
| chr3_4 | exon | 18672564 | 18672698 | 18672564 | ID=Msa0493520-mRNA-1:exon:5120;Parent=Msa0493520-mRNA-1 |
| chr3_4 | exon | 18672732 | 18672977 | 18672732 | ID=Msa0493520-mRNA-1:exon:5121;Parent=Msa0493520-mRNA-1 |
| chr3_4 | exon | 18673020 | 18673237 | 18673020 | ID=Msa0493520-mRNA-1:exon:5122;Parent=Msa0493520-mRNA-1 |
| chr3_4 | exon | 18676025 | 18676322 | 18676025 | ID=Msa0493520-mRNA-1:exon:5123;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18669695 | 18669916 | 18669695 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18669929 | 18670072 | 18669929 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18672564 | 18672698 | 18672564 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18672732 | 18672977 | 18672732 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18673020 | 18673237 | 18673020 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| chr3_4 | CDS | 18676025 | 18676322 | 18676025 | ID=Msa0493520-mRNA-1:cds;Parent=Msa0493520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
