AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0504270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0504270 MtrunA17_Chr3g0104211 93.559 621 40 0 253 873 171 791 0.0 1105
Msa0504270 MtrunA17_Chr3g0104211 91.829 257 21 0 1 257 1 257 7.86e-170 512
Msa0504270 MtrunA17_Chr5g0429571 82.986 623 91 3 253 863 171 790 0.0 1001
Msa0504270 MtrunA17_Chr5g0429571 50.923 271 103 8 8 257 4 265 7.55e-69 244
Msa0504270 MtrunA17_Chr3g0143721 50.424 472 219 9 373 839 235 696 1.19e-127 400
Msa0504270 MtrunA17_Chr4g0052411 48.352 455 223 8 386 839 229 672 1.64e-122 386
Msa0504270 MtrunA17_Chr2g0297281 46.947 475 239 9 386 859 286 748 9.55e-121 383
Msa0504270 MtrunA17_Chr7g0217421 54.571 361 153 7 386 745 39 389 1.01e-118 366
Msa0504270 MtrunA17_Chr6g0476861 41.948 503 265 9 339 839 159 636 7.32e-115 365
Msa0504270 MtrunA17_Chr7g0248361 41.176 493 275 6 348 839 153 631 2.49e-111 355
Msa0504270 MtrunA17_Chr4g0031821 43.956 455 237 6 386 839 320 757 6.71e-111 358
Msa0504270 MtrunA17_Chr7g0260601 42.947 475 247 8 386 859 240 691 2.39e-110 354
Msa0504270 MtrunA17_Chr3g0135721 44.035 461 233 8 384 842 221 658 1.23e-104 339
Msa0504270 MtrunA17_Chr3g0135761 43.640 456 233 7 388 842 224 656 2.71e-103 335
Msa0504270 MtrunA17_Chr1g0158881 41.978 455 232 8 387 839 330 754 3.72e-99 327
Msa0504270 MtrunA17_Chr8g0362771 41.453 468 243 8 385 847 236 677 5.59e-98 322
Msa0504270 MtrunA17_Chr3g0094871 40.347 461 235 9 385 839 10 436 1.24e-96 310
Msa0504270 MtrunA17_Chr5g0432631 42.670 457 237 7 388 842 231 664 2.21e-94 316
Msa0504270 MtrunA17_Chr5g0432641 39.875 479 253 10 384 852 188 641 9.02e-93 306
Msa0504270 MtrunA17_Chr6g0456351 55.556 270 112 3 372 639 303 566 1.03e-82 278
Msa0504270 MtrunA17_Chr8g0388371 35.514 535 292 11 352 851 371 887 1.57e-82 285
Msa0504270 MtrunA17_Chr1g0168321 40.741 378 180 5 386 763 164 497 1.69e-81 271
Msa0504270 MtrunA17_Chr2g0331161 39.186 467 248 11 381 841 410 846 9.73e-77 268
Msa0504270 MtrunA17_Chr3g0129971 46.053 304 156 4 379 676 289 590 1.62e-68 244
Msa0504270 MtrunA17_Chr3g0135781 56.098 164 68 1 385 548 54 213 2.52e-55 190
Msa0504270 MtrunA17_Chr4g0050561 40.157 254 145 3 387 639 157 404 3.55e-52 188
Msa0504270 MtrunA17_Chr8g0345461 38.290 269 162 3 374 641 153 418 9.85e-52 187
Msa0504270 MtrunA17_Chr7g0262801 41.111 270 151 4 365 631 166 430 3.21e-51 186
Msa0504270 MtrunA17_Chr1g0182711 40.741 270 152 4 365 631 167 431 5.14e-51 186
Msa0504270 MtrunA17_Chr1g0180791 43.496 246 130 4 378 621 197 435 6.69e-51 192
Msa0504270 MtrunA17_Chr1g0180791 33.241 361 207 9 318 658 394 740 9.63e-48 182
Msa0504270 MtrunA17_Chr2g0327121 43.621 243 128 4 381 621 202 437 3.78e-50 190
Msa0504270 MtrunA17_Chr2g0327121 39.485 233 137 3 385 616 479 708 1.33e-48 185
Msa0504270 MtrunA17_Chr8g0357301 29.058 499 288 12 401 857 485 959 4.05e-50 191
Msa0504270 MtrunA17_Chr7g0264521 43.983 241 128 4 382 621 202 436 5.07e-50 189
Msa0504270 MtrunA17_Chr7g0264521 34.494 316 187 7 318 616 395 707 3.53e-47 181
Msa0504270 MtrunA17_Chr1g0200081 37.918 269 162 4 374 641 163 427 2.08e-49 181
Msa0504270 MtrunA17_Chr3g0145011 39.286 252 141 5 385 631 138 382 6.66e-49 178
Msa0504270 MtrunA17_Chr3g0141901 39.286 252 141 5 385 631 135 379 7.11e-49 178
Msa0504270 MtrunA17_Chr5g0432391 35.789 380 174 11 388 763 54 367 1.42e-48 178
Msa0504270 MtrunA17_Chr1g0192151 41.152 243 137 4 385 625 166 404 5.16e-48 176
Msa0504270 MtrunA17_Chr4g0014731 41.152 243 137 4 385 625 167 405 5.23e-48 176
Msa0504270 MtrunA17_Chr7g0255651 45.259 232 123 3 386 616 282 510 3.00e-47 178
Msa0504270 MtrunA17_Chr7g0255651 30.962 239 143 7 405 630 29 258 8.38e-19 91.3
Msa0504270 MtrunA17_Chr3g0108321 48.705 193 93 3 373 562 146 335 9.00e-46 168
Msa0504270 MtrunA17_Chr7g0255721 40.226 266 148 5 386 644 685 946 3.10e-45 176
Msa0504270 MtrunA17_Chr7g0255721 39.819 221 125 4 397 615 395 609 1.70e-33 139
Msa0504270 MtrunA17_Chr2g0277831 44.828 232 118 3 388 615 245 470 5.62e-44 171
Msa0504270 MtrunA17_Chr2g0277831 39.738 229 133 2 385 612 532 756 4.05e-37 150
Msa0504270 MtrunA17_Chr7g0255691 43.830 235 122 4 386 616 286 514 6.94e-43 164
Msa0504270 MtrunA17_Chr7g0255691 33.459 266 142 10 371 624 6 248 3.21e-23 105
Msa0504270 MtrunA17_Chr7g0255641 36.957 276 160 6 386 654 658 926 7.03e-43 169
Msa0504270 MtrunA17_Chr7g0255641 37.220 223 129 7 397 617 405 618 5.36e-29 124
Msa0504270 MtrunA17_Chr4g0033451 40.161 249 138 4 373 615 367 610 1.51e-40 162
Msa0504270 MtrunA17_Chr3g0086401 40.336 238 126 4 384 612 90 320 6.06e-40 157
Msa0504270 MtrunA17_Chr3g0086401 38.618 246 128 5 386 612 385 626 1.58e-34 141
Msa0504270 MtrunA17_Chr6g0462581 42.731 227 119 5 386 609 500 718 1.66e-39 157
Msa0504270 MtrunA17_Chr8g0387641 40.529 227 125 5 386 609 521 740 8.52e-39 155
Msa0504270 MtrunA17_Chr2g0316851 38.961 231 130 4 388 612 596 821 1.22e-37 153
Msa0504270 MtrunA17_Chr1g0202371 41.304 230 118 7 386 609 397 615 3.01e-37 149
Msa0504270 MtrunA17_Chr5g0397121 40.088 227 126 5 386 609 513 732 5.47e-37 149
Msa0504270 MtrunA17_Chr1g0190401 41.081 185 107 2 386 569 677 860 6.64e-37 150
Msa0504270 MtrunA17_Chr7g0255901 35.714 280 155 8 371 630 624 898 7.86e-37 149
Msa0504270 MtrunA17_Chr4g0043381 35.983 239 137 6 390 624 841 1067 7.01e-36 147
Msa0504270 MtrunA17_Chr1g0202381 40.789 228 123 7 386 609 468 687 8.56e-36 145
Msa0504270 MtrunA17_Chr1g0204031 39.744 234 129 6 386 615 557 782 2.53e-35 144
Msa0504270 MtrunA17_Chr3g0116131 40.789 228 124 6 386 609 902 1122 4.38e-35 144
Msa0504270 MtrunA17_Chr6g0459561 38.983 236 128 7 381 610 377 602 4.87e-35 142
Msa0504270 MtrunA17_Chr1g0195731 39.316 234 131 6 386 615 934 1160 2.10e-34 142
Msa0504270 MtrunA17_Chr2g0327231 33.884 242 145 5 318 545 265 505 4.03e-34 137
Msa0504270 MtrunA17_Chr1g0195741 39.316 234 131 6 386 615 938 1164 6.61e-34 140
Msa0504270 MtrunA17_Chr4g0026631 36.885 244 133 7 385 620 126 356 7.54e-33 132
Msa0504270 MtrunA17_Chr2g0321241 37.551 245 130 8 385 620 131 361 1.26e-32 132
Msa0504270 MtrunA17_Chr3g0086411 35.227 264 148 5 386 631 215 473 2.88e-32 132
Msa0504270 MtrunA17_Chr3g0086411 46.259 147 68 2 473 612 7 149 6.87e-26 112
Msa0504270 MtrunA17_Chr4g0038101 38.034 234 122 7 386 609 721 941 4.55e-31 131
Msa0504270 MtrunA17_Chr4g0004121 34.343 297 168 10 386 664 242 529 2.83e-30 126
Msa0504270 MtrunA17_Chr6g0459541 33.591 259 133 8 382 610 38 287 2.76e-29 120
Msa0504270 MtrunA17_Chr7g0246111 35.983 239 140 7 381 615 207 436 7.34e-29 121
Msa0504270 MtrunA17_Chr3g0127431 35.565 239 132 8 386 615 84 309 2.34e-28 118
Msa0504270 MtrunA17_Chr3g0127401 35.983 239 131 8 386 615 81 306 3.01e-28 117
Msa0504270 MtrunA17_Chr4g0047411 37.619 210 116 6 411 608 202 408 3.76e-28 121
Msa0504270 MtrunA17_Chr4g0052271 34.298 242 146 7 385 622 118 350 9.16e-26 110
Msa0504270 MtrunA17_Chr6g0459551 32.836 268 137 11 375 610 91 347 2.23e-25 110
Msa0504270 MtrunA17_Chr3g0135791 30.418 263 165 5 581 842 7 252 9.48e-23 99.8
Msa0504270 MtrunA17_Chr2g0289231 32.218 239 129 9 386 608 297 518 8.62e-21 97.4
Msa0504270 MtrunA17_Chr6g0459531 28.814 295 146 11 335 610 11 260 1.81e-18 87.4
Msa0504270 MtrunA17_Chr4g0062081 48.718 78 38 2 389 464 10 87 7.18e-15 71.2
Msa0504270 MtrunA17_Chr3g0135741 37.410 139 81 3 581 719 5 137 6.55e-14 70.1
Msa0504270 MtrunA17_Chr8g0392971 39.604 101 56 2 598 697 51 147 4.38e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0504270 AT5G58870.1 77.831 627 118 4 253 865 185 804 0.0 942
Msa0504270 AT5G58870.1 46.614 251 118 5 21 257 30 278 3.73e-59 217
Msa0504270 AT3G47060.1 78.491 623 116 5 253 865 186 800 0.0 926
Msa0504270 AT3G47060.1 44.981 269 132 6 4 257 8 275 1.84e-60 221
Msa0504270 AT1G50250.1 50.424 472 219 9 373 839 245 706 1.06e-126 398
Msa0504270 AT2G30950.1 49.011 455 219 9 386 839 224 666 5.22e-124 390
Msa0504270 AT2G30950.2 49.011 455 219 9 386 839 224 666 5.22e-124 390
Msa0504270 AT2G30950.3 49.011 455 219 9 386 839 224 666 5.22e-124 390
Msa0504270 AT2G30950.4 49.011 455 219 9 386 839 228 670 5.30e-124 390
Msa0504270 AT1G06430.1 49.231 455 218 9 386 839 217 659 8.64e-124 389
Msa0504270 AT1G06430.3 49.231 455 218 9 386 839 217 659 8.64e-124 389
Msa0504270 AT1G06430.2 49.231 455 218 9 386 839 217 659 8.64e-124 389
Msa0504270 AT5G42270.1 47.860 514 251 10 333 839 191 694 1.06e-123 390
Msa0504270 AT5G15250.1 47.253 455 228 8 386 839 221 664 1.96e-117 373
Msa0504270 AT2G29080.1 41.983 474 258 7 367 839 300 757 3.95e-107 349
Msa0504270 AT1G07510.1 43.077 455 241 6 386 839 324 761 4.38e-107 349
Msa0504270 AT5G53170.1 42.325 456 229 9 387 839 360 784 3.43e-101 333
Msa0504270 AT2G26140.1 42.641 462 241 8 385 845 223 661 5.49e-101 330
Msa0504270 AT5G15250.2 54.698 298 108 4 386 660 221 514 1.21e-93 305
Msa0504270 AT4G23940.1 38.432 523 261 11 352 835 394 894 1.14e-89 305
Msa0504270 AT3G02450.1 50.774 323 134 5 372 690 317 618 4.75e-86 287
Msa0504270 AT3G16290.1 43.714 350 183 7 381 726 402 741 5.43e-73 257
Msa0504270 AT5G64580.1 45.364 302 155 4 379 674 306 603 1.06e-65 236
Msa0504270 AT1G79560.1 30.129 541 298 17 373 868 483 988 1.85e-53 202
Msa0504270 AT2G20140.1 41.481 270 150 4 365 631 164 428 2.79e-52 189
Msa0504270 AT1G79560.2 29.868 529 293 16 373 856 483 978 3.22e-52 198
Msa0504270 AT5G58290.1 44.444 243 127 4 386 625 152 389 5.85e-52 187
Msa0504270 AT5G19990.2 40.157 254 145 3 387 639 101 348 7.05e-52 186
Msa0504270 AT5G19990.1 39.768 259 153 2 387 644 159 415 1.24e-51 187
Msa0504270 AT5G19990.3 39.768 259 153 2 387 644 159 415 1.24e-51 187
Msa0504270 AT1G53750.1 38.290 269 162 3 374 641 153 418 1.51e-51 187
Msa0504270 AT5G20000.1 39.768 259 153 2 387 644 159 415 2.00e-51 186
Msa0504270 AT4G29040.1 41.111 270 151 4 365 631 164 428 3.23e-51 186
Msa0504270 AT3G09840.1 43.902 246 129 4 378 621 196 434 5.20e-51 193
Msa0504270 AT3G09840.1 39.056 233 139 2 385 616 476 706 4.30e-49 187
Msa0504270 AT1G79560.3 30.658 486 264 15 401 841 505 962 5.62e-51 194
Msa0504270 AT5G03340.1 43.902 246 129 4 378 621 196 434 6.49e-51 192
Msa0504270 AT5G03340.1 38.627 233 139 3 385 616 476 705 3.96e-46 178
Msa0504270 AT3G56690.1 42.688 253 138 5 386 637 721 967 2.11e-50 192
Msa0504270 AT3G56690.1 33.333 237 151 3 381 615 375 606 1.61e-31 133
Msa0504270 AT3G53230.1 43.548 248 133 4 378 624 197 438 2.61e-50 191
Msa0504270 AT3G53230.1 39.056 233 138 3 385 616 477 706 6.21e-47 181
Msa0504270 AT1G53780.1 39.630 270 157 5 374 641 325 590 4.55e-50 187
Msa0504270 AT1G53780.4 39.630 270 157 5 374 641 325 590 4.55e-50 187
Msa0504270 AT1G53780.3 39.630 270 157 5 374 641 324 589 5.31e-50 187
Msa0504270 AT1G53780.2 39.630 270 157 5 374 641 346 611 9.18e-50 186
Msa0504270 AT1G45000.1 40.079 252 139 5 385 631 135 379 1.64e-49 180
Msa0504270 AT5G43010.1 39.683 252 140 5 385 631 135 379 2.07e-49 180
Msa0504270 AT3G05530.1 41.564 243 136 4 385 625 167 405 1.90e-48 178
Msa0504270 AT1G09100.1 40.741 243 138 4 385 625 166 404 6.45e-47 174
Msa0504270 AT3G01610.1 43.210 243 113 7 387 616 231 461 9.86e-43 168
Msa0504270 AT3G01610.1 39.326 267 147 6 386 650 525 778 8.79e-34 140
Msa0504270 AT3G01610.2 43.210 243 113 7 387 616 231 461 1.10e-42 168
Msa0504270 AT3G01610.2 39.326 267 147 6 386 650 525 778 9.80e-34 140
Msa0504270 AT1G05910.1 37.500 272 159 4 373 638 365 631 1.81e-41 165
Msa0504270 AT2G03670.1 41.379 232 133 2 386 616 283 512 4.12e-40 157
Msa0504270 AT2G03670.1 37.308 260 138 8 389 635 22 269 7.77e-33 135
Msa0504270 AT5G08470.1 38.750 240 134 5 377 612 832 1062 1.10e-38 156
Msa0504270 AT5G08470.3 38.750 240 134 5 377 612 823 1053 1.26e-38 156
Msa0504270 AT4G28000.3 40.529 227 124 5 386 609 517 735 3.77e-38 153
Msa0504270 AT4G28000.2 40.529 227 124 5 386 609 517 735 3.81e-38 154
Msa0504270 AT4G28000.1 40.529 227 124 5 386 609 515 733 3.88e-38 154
Msa0504270 AT3G04340.1 42.162 185 105 2 386 569 781 964 1.12e-37 153
Msa0504270 AT1G03000.1 36.170 282 154 9 371 631 640 916 2.82e-37 151
Msa0504270 AT1G64110.5 39.912 228 127 5 385 609 515 735 1.03e-36 149
Msa0504270 AT1G64110.3 39.912 228 127 5 385 609 515 735 1.03e-36 149
Msa0504270 AT1G64110.2 39.912 228 127 5 385 609 517 737 1.12e-36 149
Msa0504270 AT1G64110.4 39.912 228 127 5 385 609 517 737 1.12e-36 149
Msa0504270 AT1G64110.1 39.912 228 127 5 385 609 512 732 1.25e-36 149
Msa0504270 AT4G24860.3 39.834 241 131 7 386 622 815 1045 3.28e-36 148
Msa0504270 AT4G24860.1 39.834 241 131 7 386 622 817 1047 3.47e-36 148
Msa0504270 AT4G24860.2 39.834 241 131 7 386 622 813 1043 4.22e-36 148
Msa0504270 AT4G24860.4 39.834 241 131 7 386 622 790 1020 5.02e-36 147
Msa0504270 AT5G52882.1 39.207 227 127 5 386 609 514 732 1.06e-35 146
Msa0504270 AT1G02890.1 38.760 258 140 8 386 639 941 1184 6.45e-35 144
Msa0504270 AT3G15120.1 37.083 240 139 5 380 612 709 943 4.25e-34 142
Msa0504270 AT3G15120.2 37.083 240 139 5 380 612 719 953 4.56e-34 142
Msa0504270 AT2G03670.2 37.308 260 138 8 389 635 22 269 1.64e-33 134
Msa0504270 AT2G03670.2 41.429 140 81 1 386 524 283 422 8.67e-21 96.7
Msa0504270 AT4G02480.1 39.744 234 130 6 386 615 960 1186 1.73e-33 140
Msa0504270 AT3G27120.1 37.815 238 138 7 376 610 390 620 3.75e-33 137
Msa0504270 AT2G45500.4 36.555 238 140 6 381 615 75 304 5.72e-32 128
Msa0504270 AT2G45500.3 36.555 238 140 6 381 615 75 304 5.72e-32 128
Msa0504270 AT2G45500.2 36.555 238 140 6 381 615 208 437 3.17e-31 129
Msa0504270 AT2G45500.1 36.555 238 140 6 381 615 212 441 3.46e-31 129
Msa0504270 AT2G45500.5 36.555 238 140 6 381 615 218 447 3.58e-31 129
Msa0504270 AT2G27600.1 35.246 244 137 7 385 620 128 358 5.69e-31 127
Msa0504270 AT1G80350.1 37.083 240 132 7 386 615 236 466 5.95e-30 125
Msa0504270 AT3G19740.1 37.281 228 132 6 386 609 701 921 1.52e-29 127
Msa0504270 AT1G50140.3 38.034 234 122 7 386 609 711 931 1.74e-29 127
Msa0504270 AT1G50140.1 38.034 234 122 7 386 609 711 931 1.74e-29 127
Msa0504270 AT1G50140.4 38.034 234 122 7 386 609 711 931 1.74e-29 127
Msa0504270 AT1G50140.2 38.034 234 122 7 386 609 689 909 1.93e-29 126
Msa0504270 AT1G50140.5 38.034 234 122 7 386 609 689 909 1.93e-29 126
Msa0504270 AT2G34560.1 35.537 242 142 8 385 621 99 331 1.31e-28 119
Msa0504270 AT2G34560.2 35.537 242 142 8 385 621 108 340 1.37e-28 119
Msa0504270 AT4G04910.1 36.885 244 126 10 411 629 239 479 2.02e-28 122
Msa0504270 AT5G53540.1 36.441 236 134 8 386 615 84 309 6.00e-28 117
Msa0504270 AT1G62130.1 37.344 241 125 9 386 622 750 968 8.22e-28 121
Msa0504270 AT1G62130.2 37.344 241 125 9 386 622 743 961 8.90e-28 121
Msa0504270 AT1G45000.2 40.559 143 79 3 385 524 135 274 7.13e-27 113
Msa0504270 AT4G27680.1 34.322 236 139 7 386 615 81 306 1.49e-26 113
Msa0504270 AT4G04180.1 31.356 236 139 7 384 608 314 537 9.65e-25 110
Msa0504270 AT4G04180.2 31.356 236 139 7 384 608 309 532 1.23e-24 110
Msa0504270 AT1G02890.2 36.434 258 118 11 386 639 941 1156 1.40e-24 111
Msa0504270 AT5G08470.2 34.337 166 98 3 377 538 832 990 1.61e-20 98.2
Msa0504270 AT5G17760.1 30.986 213 120 9 357 552 180 382 3.79e-11 67.0
Msa0504270 AT2G18193.1 33.908 174 96 7 387 552 207 369 3.93e-11 67.0

Find 263 sgRNAs with CRISPR-Local

Find 2 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATTTGGTTAAATTATT+TGG 0.000916 3_4:-48524431 None:intergenic
GGTCGCCTGGTGACCCTTCT+TGG 0.206218 3_4:+48522907 Msa0504270:CDS
GCTGAAGAAGTTGTTTATTC+TGG 0.219593 3_4:+48522940 Msa0504270:CDS
TGGGACAAACCCTAGAATTT+TGG 0.222363 3_4:-48515934 None:intergenic
TAATTTACTTTGCTTCAATT+TGG 0.242522 3_4:-48524444 None:intergenic
CCGAGCAAATCCTACTGTTT+TGG 0.245175 3_4:+48523287 Msa0504270:CDS
ATCTTACAGGCAGGCCTTCC+TGG 0.249720 3_4:+48521133 Msa0504270:intron
ATCTCTTTGCAAGGGCAAAA+AGG 0.255239 3_4:+48521275 Msa0504270:CDS
TTGGAGAGTGAGGTGGAGTT+TGG 0.260879 3_4:+48518351 Msa0504270:CDS
TTTGATTATGTGAAAGATAT+TGG 0.262015 3_4:+48524388 Msa0504270:three_prime_UTR
CCAAGGTCAGGAGGGGCTTT+GGG 0.262526 3_4:+48522823 Msa0504270:CDS
AATGCCACAGGTCTGGTAAA+TGG 0.269543 3_4:+48524263 Msa0504270:three_prime_UTR
TACCTCGTCGATAAATATTA+TGG 0.283704 3_4:-48521308 None:intergenic
CTTATATCTCAAATACTAAT+AGG 0.305751 3_4:+48524132 Msa0504270:three_prime_UTR
TTGGAGAATCAGGTGGAGTT+TGG 0.312434 3_4:+48516556 Msa0504270:CDS
GCCAAGGTCAGGAGGGGCTT+TGG 0.312957 3_4:+48522822 Msa0504270:CDS
TCAATTTGGTTAAATTATTT+GGG 0.313139 3_4:-48524430 None:intergenic
CTCACCTGAGAAAAGTTTAC+AGG 0.315173 3_4:-48520091 None:intergenic
GCTTCTCTTCCGATCCTATC+AGG 0.316464 3_4:-48522041 None:intergenic
AGTTCATGAATCAGATTCTT+TGG 0.317104 3_4:+48518248 Msa0504270:CDS
TAGCAGTGTGGAATGTAATT+TGG 0.320256 3_4:+48524071 Msa0504270:three_prime_UTR
CTAGCAGAACAACTTATAAA+TGG 0.322600 3_4:-48521205 None:intergenic
GCTGTTGATGATACCGGTTC+AGG 0.331468 3_4:+48516097 Msa0504270:CDS
AATTCTGCAGTGATAGTTCT+TGG 0.332473 3_4:+48521636 Msa0504270:CDS
AGTGGTGGGATCGATGAATC+TGG 0.332790 3_4:+48523081 Msa0504270:CDS
GTGAAGAAAGTGGAGGTAGA+TGG 0.339099 3_4:+48516376 Msa0504270:CDS
TCTATGACCACTGGTTTCAC+TGG 0.340124 3_4:+48522134 Msa0504270:CDS
GCTACAAAAGTGGTTAAAAT+TGG 0.342779 3_4:+48523925 Msa0504270:CDS
GGAGGGTCTTGGTGCTTACT+TGG 0.343003 3_4:+48523308 Msa0504270:CDS
GCAGTTGCAAAGCTTCTTCC+TGG 0.354861 3_4:+48522626 Msa0504270:CDS
AGTAGGATTTGCTCGGATAA+TGG 0.355003 3_4:-48523280 None:intergenic
TGAGAAGATGTTGGAGAATC+AGG 0.357066 3_4:+48516546 Msa0504270:CDS
GGGTCGCCGGATAAGTGTTC+TGG 0.374607 3_4:+48518372 Msa0504270:CDS
AGCAGTGTGGAATGTAATTT+GGG 0.377888 3_4:+48524072 Msa0504270:three_prime_UTR
CCTTGTTGATCTTGTTCAAA+AGG 0.380535 3_4:+48523215 Msa0504270:CDS
TGAAGAAAGTGGAGGTAGAT+GGG 0.382487 3_4:+48516377 Msa0504270:CDS
GTAAAGCAGCCTCGTTTACT+AGG 0.389025 3_4:-48522254 None:intergenic
CAGATTCGGAATCGCAAATC+AGG 0.392571 3_4:+48520227 Msa0504270:CDS
ACAAAAGTTGTTGAAACCTT+AGG 0.393827 3_4:-48516307 None:intergenic
GTGGCATTGATTGTGTGAAT+TGG 0.396339 3_4:-48524248 None:intergenic
ACTACACGGTCAAATCTTCC+TGG 0.397635 3_4:-48521702 None:intergenic
GACCCTGCTGTTCGCCGTCC+AGG 0.397650 3_4:+48521684 Msa0504270:CDS
TACAAGGCTATAGCTGAATA+TGG 0.397696 3_4:+48523015 Msa0504270:CDS
GGGTCGCCGGATAAGCGTTC+TGG 0.397720 3_4:+48516577 Msa0504270:CDS
GCGAGGAAAGTGGAGGTTGA+TGG 0.399784 3_4:+48518171 Msa0504270:CDS
AGTGTATGATTCAGAGTCTT+TGG 0.400697 3_4:+48516453 Msa0504270:CDS
TTCCTCTGAATCGGTTTCAC+TGG 0.409152 3_4:-48516068 None:intergenic
CGAGGAAAGTGGAGGTTGAT+GGG 0.412535 3_4:+48518172 Msa0504270:CDS
CAACTTTGTATATTTCTGTA+AGG 0.414676 3_4:+48524170 Msa0504270:three_prime_UTR
TATGTCATATTAACAATGTA+TGG 0.415980 3_4:-48524325 None:intergenic
TGACGAGTTGCTTGGTCGCC+TGG 0.417310 3_4:+48522894 Msa0504270:CDS
CTCTGAATCGGTTTCACTGG+TGG 0.419503 3_4:-48516065 None:intergenic
TACTCTGTTTCTCCTTCCTC+CGG 0.421054 3_4:-48516135 None:intergenic
GGCGGGAAAATTGACATGTT+TGG 0.422129 3_4:-48515913 None:intergenic
AAGGAGAAACAGAGTAAAAG+TGG 0.422395 3_4:+48516142 Msa0504270:CDS
TTAGCCAAGGATGTTGGCCT+TGG 0.425284 3_4:+48522101 Msa0504270:CDS
CTTCCTGGACGGCGAACAGC+AGG 0.426000 3_4:-48521687 None:intergenic
AAGATTTGACCGTGTAGTTA+TGG 0.428371 3_4:+48521707 Msa0504270:CDS
GGTGGAGGTGGCCGGAGTTA+CGG 0.428992 3_4:+48516173 Msa0504270:CDS
GGAATAAAACGACGTGGGTT+GGG 0.429589 3_4:-48515953 None:intergenic
AGCTCCTTGGGGAAAGGATC+AGG 0.431395 3_4:+48523110 Msa0504270:CDS
TGGAGAATCAGGTGGAGTTT+GGG 0.433226 3_4:+48516557 Msa0504270:CDS
GTGGTGGGATCGATGAATCT+GGG 0.433378 3_4:+48523082 Msa0504270:CDS
CCAAGTCGTGTGTATCTGTC+TGG 0.439684 3_4:-48520508 None:intergenic
CTATTAGCAAAGGCTGTGGC+TGG 0.441269 3_4:+48521169 Msa0504270:CDS
CGGCCCGGAGTTTCGTTACC+CGG 0.443890 3_4:+48516277 Msa0504270:CDS
CTATTCATTGACGAGTTGCT+TGG 0.447609 3_4:+48522886 Msa0504270:CDS
TTCACGAAGATTTGGATTGT+GGG 0.448501 3_4:+48516009 Msa0504270:CDS
CATACGAAGAGCGACTGATA+TGG 0.449900 3_4:+48522990 Msa0504270:CDS
TGGAGAGTGAGGTGGAGTTT+GGG 0.450879 3_4:+48518352 Msa0504270:CDS
ACCTCAACACGTGGTTGTCC+AGG 0.451266 3_4:-48522644 None:intergenic
GTGGAAAGTGGCGGTGGAGG+TGG 0.452088 3_4:+48516161 Msa0504270:CDS
GTCATAAACTTGTCTGCAAT+GGG 0.453109 3_4:-48524024 None:intergenic
CTTAGGTGGAAGCACCTGAT+AGG 0.455298 3_4:+48522027 Msa0504270:intron
AATCCACCAGAACGCTTATC+CGG 0.456636 3_4:-48516583 None:intergenic
TATTCTGGACGAGTTTCAAC+TGG 0.458779 3_4:+48522955 Msa0504270:CDS
GGGTGCAGCTCCTTGGGGAA+AGG 0.459201 3_4:+48523104 Msa0504270:CDS
GTCGCCAAGGCCAACATCCT+TGG 0.459223 3_4:-48522105 None:intergenic
TTAGTTCAAGCACAGGAGAT+TGG 0.461961 3_4:+48516205 Msa0504270:CDS
ACATAGATATATAAATCAAT+TGG 0.462487 3_4:+48524292 Msa0504270:three_prime_UTR
TTTATGCTGCTGCGCTTGCA+GGG 0.462703 3_4:+48520053 Msa0504270:CDS
AAATATCTATCCTCATTTGT+TGG 0.464047 3_4:-48522862 None:intergenic
AGCATACTGCTGGTCAGATT+CGG 0.467332 3_4:+48520213 Msa0504270:intron
GTTACCCGGGGCGGAACCTA+AGG 0.468223 3_4:+48516291 Msa0504270:CDS
TGAACCGTTGCTCCCTGAAC+CGG 0.469975 3_4:-48516110 None:intergenic
CACAATCAATGCCACAGGTC+TGG 0.471990 3_4:+48524256 Msa0504270:three_prime_UTR
CCCAAAGCCCCTCCTGACCT+TGG 0.473553 3_4:-48522823 None:intergenic
TGTAGAGTTGTATGTTGGCA+TGG 0.475461 3_4:+48521234 Msa0504270:CDS
GTCCTCCAAGAAGGGTCACC+AGG 0.476492 3_4:-48522912 None:intergenic
TGCTTACCAATGCAGAGTTA+AGG 0.476845 3_4:-48516606 None:intergenic
TTCTCCAACATCTTCTCATA+AGG 0.478310 3_4:-48516541 None:intergenic
TATTTGAGATATAAGTTCAC+TGG 0.479383 3_4:-48524124 None:intergenic
AAAGGTGGTGTTGGAAATGT+TGG 0.480721 3_4:+48516421 Msa0504270:CDS
TGAGGTGGAGTTTGGGTCGC+CGG 0.482018 3_4:+48518359 Msa0504270:CDS
AGGAATAAAACGACGTGGGT+TGG 0.483773 3_4:-48515954 None:intergenic
AACTTTACTGCAGTCTGCAC+TGG 0.484495 3_4:+48523245 Msa0504270:CDS
ATTCACGAAGATTTGGATTG+TGG 0.486033 3_4:+48516008 Msa0504270:CDS
TCAGGTGGAGTTTGGGTCGC+CGG 0.486477 3_4:+48516564 Msa0504270:CDS
TCAGAAAAGGAGAAAGTTGA+GGG 0.486957 3_4:+48523896 Msa0504270:intron
TTGTTAATATGACATATGAC+TGG 0.487131 3_4:+48524332 Msa0504270:three_prime_UTR
GACATTGCTTCTATGACCAC+TGG 0.488410 3_4:+48522125 Msa0504270:CDS
TAAGGGGTTCTAATATAACT+TGG 0.491897 3_4:-48518318 None:intergenic
TTTCTCACTTCCTTGCAACT+TGG 0.491996 3_4:-48522558 None:intergenic
TGCTGTTTGCAGCATACTGC+TGG 0.493014 3_4:+48520203 Msa0504270:intron
AACGAGGCTGCTTTACTAGC+TGG 0.494002 3_4:+48522261 Msa0504270:CDS
CGCCTGGTGACCCTTCTTGG+AGG 0.497834 3_4:+48522910 Msa0504270:CDS
ACAAAAGTGGTTAAAATTGG+TGG 0.498015 3_4:+48523928 Msa0504270:CDS
GAGTAGGGTTAATGGTAATG+AGG 0.504036 3_4:+48516354 Msa0504270:CDS
TGAATCAGATTCTTTGGTGA+AGG 0.504371 3_4:+48518254 Msa0504270:CDS
TCTTACAGGCAGGCCTTCCT+GGG 0.507245 3_4:+48521134 Msa0504270:intron
GTAGAGTTGTATGTTGGCAT+GGG 0.508160 3_4:+48521235 Msa0504270:CDS
AAAGTGGAAAGTGGCGGTGG+AGG 0.508700 3_4:+48516158 Msa0504270:CDS
TTAAGTATATTGCCAAGGTC+AGG 0.509180 3_4:+48522811 Msa0504270:CDS
AAAAGTTTACAGGGAATCGT+TGG 0.510524 3_4:-48520081 None:intergenic
TTTACATTACAGGAGATGGA+TGG 0.513233 3_4:+48521603 Msa0504270:intron
CAGCTGCACGTCCTCCAAGA+AGG 0.513525 3_4:-48522921 None:intergenic
TACTAATAGATCAGATGTCT+TGG 0.514690 3_4:+48521662 Msa0504270:CDS
TGTCATAAACTTGTCTGCAA+TGG 0.515279 3_4:-48524025 None:intergenic
CAGGCAGGCCTTCCTGGGAC+AGG 0.515319 3_4:+48521139 Msa0504270:intron
AAAGTGGCGGTGGAGGTGGC+CGG 0.515410 3_4:+48516165 Msa0504270:CDS
GGACATTGACATAGGGCCTA+TGG 0.516265 3_4:-48523049 None:intergenic
ACGAAAAGAGCAAGCTCTGT+TGG 0.518247 3_4:-48523956 None:intergenic
TTCAAGTTGAAAGGTGGTGT+TGG 0.518250 3_4:+48516412 Msa0504270:CDS
AATAGAGTCTTGCCTGTCCC+AGG 0.519122 3_4:-48521151 None:intergenic
TAATGAAAGTGGTACTCTAA+AGG 0.519238 3_4:-48515857 None:intergenic
TCGTTCAGATGACTTTGTAC+TGG 0.519611 3_4:-48520255 None:intergenic
TATTAGCAAAGGCTGTGGCT+GGG 0.520301 3_4:+48521170 Msa0504270:CDS
ATCTCCTGTGCTTGAACTAA+CGG 0.521532 3_4:-48516202 None:intergenic
CTGTTGATGATACCGGTTCA+GGG 0.521684 3_4:+48516098 Msa0504270:CDS
GGCCCGGAGTTTCGTTACCC+GGG 0.522078 3_4:+48516278 Msa0504270:CDS
GTATAAACTATCCTCTTACT+TGG 0.522332 3_4:-48516490 None:intergenic
ATTAGCAAAGGCTGTGGCTG+GGG 0.524320 3_4:+48521171 Msa0504270:CDS
AGAAATATACAAAGTTGTAA+AGG 0.525869 3_4:-48524164 None:intergenic
GGAGAAGAGACTCTTGCAAT+GGG 0.527586 3_4:-48524003 None:intergenic
AATCCACCAGAACACTTATC+CGG 0.528009 3_4:-48518378 None:intergenic
AGCGACTGATATGGCATACA+AGG 0.528014 3_4:+48522999 Msa0504270:CDS
TTGAAGATAGTGATTAGAGA+AGG 0.528244 3_4:-48515828 None:intergenic
TGGTAATGAGGTGAAGAAAG+TGG 0.528245 3_4:+48516366 Msa0504270:CDS
CTTCCTTTAGCCAAGGATGT+TGG 0.528904 3_4:+48522095 Msa0504270:CDS
AGAAATTAAGTATATTGCCA+AGG 0.530591 3_4:+48522806 Msa0504270:intron
AACCCCTTATGAAAAGATGT+TGG 0.530837 3_4:+48518332 Msa0504270:CDS
AATGTTATGTTCAAGTTGAA+AGG 0.531818 3_4:+48516403 Msa0504270:CDS
AACGGTTGCCACCGTAACTC+CGG 0.533323 3_4:-48516184 None:intergenic
TGGATTCTTTAACTTTGCGC+TGG 0.533649 3_4:+48518395 Msa0504270:CDS
AGGCCAACATCCTTGGCTAA+AGG 0.534449 3_4:-48522098 None:intergenic
TGGTAATTAGGCGAGGAAAG+TGG 0.535561 3_4:+48518161 Msa0504270:intron
TGGATTCCTTAACTCTGCAT+TGG 0.535985 3_4:+48516600 Msa0504270:CDS
GAAACCTTAGGTTCCGCCCC+GGG 0.538238 3_4:-48516295 None:intergenic
GGTCTTGGTGCTTACTTGGA+AGG 0.538276 3_4:+48523312 Msa0504270:CDS
GCATAAACTATCCTCTTAGT+TGG 0.539021 3_4:-48518285 None:intergenic
CGCCCCGGGTAACGAAACTC+CGG 0.541728 3_4:-48516281 None:intergenic
GAAAGTGTGGACATTGACAT+AGG 0.541780 3_4:-48523057 None:intergenic
GAGGCTGGTCACGCCGTAGT+AGG 0.543790 3_4:+48522599 Msa0504270:CDS
AAACCGGCTGTTGATGATAC+CGG 0.545529 3_4:+48516091 Msa0504270:CDS
GACTCTTGCAATGGGAGAAG+AGG 0.546106 3_4:-48523995 None:intergenic
TATCTATCCTCATTTGTTGG+CGG 0.547036 3_4:-48522859 None:intergenic
AACTCCTTATGAGAAGATGT+TGG 0.548826 3_4:+48516537 Msa0504270:CDS
CTATGACCACTGGTTTCACT+GGG 0.550111 3_4:+48522135 Msa0504270:CDS
GATTCAGAGTCTTTGGTGAA+GGG 0.550853 3_4:+48516460 Msa0504270:CDS
TTACATTACAGGAGATGGAT+GGG 0.551162 3_4:+48521604 Msa0504270:intron
TGAAAAGATGTTGGAGAGTG+AGG 0.552656 3_4:+48518341 Msa0504270:CDS
GTGAACAACAATGGTGGATG+AGG 0.553063 3_4:-48515744 None:intergenic
TGGTGGGATCGATGAATCTG+GGG 0.555277 3_4:+48523083 Msa0504270:CDS
CCAGACAGATACACACGACT+TGG 0.556608 3_4:+48520508 Msa0504270:CDS
GATTGAAAACGACATGAAGA+AGG 0.557865 3_4:-48515974 None:intergenic
GAATCAGATTCTTTGGTGAA+GGG 0.558077 3_4:+48518255 Msa0504270:CDS
TCGTCGATAAATATTATGGA+TGG 0.558809 3_4:-48521304 None:intergenic
AAAAGAACTTCCTTTAGCCA+AGG 0.558871 3_4:+48522088 Msa0504270:CDS
AAAGGTGGTGTTGAAAATGT+TGG 0.559409 3_4:+48518216 Msa0504270:CDS
TTATACTCCGCCAACAAATG+AGG 0.559411 3_4:+48522852 Msa0504270:CDS
AGCTGCACGTCCTCCAAGAA+GGG 0.560964 3_4:-48522920 None:intergenic
TCAACGAAAGATCCACAAGA+TGG 0.563627 3_4:+48516032 Msa0504270:CDS
ATGTCCACACTTTCTAGTGG+TGG 0.564866 3_4:+48523066 Msa0504270:CDS
AAGAAAACTGCCAAGTTGCA+AGG 0.566875 3_4:+48522548 Msa0504270:CDS
GAAGAAAGTGGAGGTAGATG+GGG 0.570444 3_4:+48516378 Msa0504270:CDS
GAGGAAAGTGGAGGTTGATG+GGG 0.571091 3_4:+48518173 Msa0504270:CDS
AATGTAATGTTCAAGTTGAA+AGG 0.571673 3_4:+48518198 Msa0504270:CDS
TTCAGAAAAGGAGAAAGTTG+AGG 0.572958 3_4:+48523895 Msa0504270:intron
CAGGGAGCAACGGTTCAGAC+CGG 0.574390 3_4:+48516116 Msa0504270:CDS
AGAGGAGCTAGAAGAGATTG+TGG 0.574409 3_4:+48520325 Msa0504270:CDS
GGGAGAAGAGACTCTTGCAA+TGG 0.574587 3_4:-48524004 None:intergenic
CAACGGTTCAGACCGGAGGA+AGG 0.575011 3_4:+48516123 Msa0504270:CDS
TATGGTCTTAATCAGACCAT+AGG 0.576028 3_4:+48523033 Msa0504270:CDS
TCCTGGACAACCACGTGTTG+AGG 0.576316 3_4:+48522643 Msa0504270:CDS
GAGTTTGTAGAGTTGTATGT+TGG 0.577372 3_4:+48521229 Msa0504270:CDS
CCAAAACAGTAGGATTTGCT+CGG 0.578991 3_4:-48523287 None:intergenic
GTAATGAGGTTGATTCGGCC+CGG 0.581191 3_4:+48516262 Msa0504270:CDS
TCGCCGGATAAGCGTTCTGG+TGG 0.582027 3_4:+48516580 Msa0504270:CDS
AGTATATTGCCAAGGTCAGG+AGG 0.583606 3_4:+48522814 Msa0504270:CDS
GCCCCGGGTAACGAAACTCC+GGG 0.584705 3_4:-48516280 None:intergenic
ACCAATAAAACACCGCGAGG+AGG 0.585423 3_4:-48520538 None:intergenic
AAGGAGATCGATAATGAAAG+TGG 0.586063 3_4:-48515868 None:intergenic
TCGCCGGATAAGTGTTCTGG+TGG 0.587976 3_4:+48518375 Msa0504270:CDS
TGATTCAGAGTCTTTGGTGA+AGG 0.588768 3_4:+48516459 Msa0504270:CDS
GTAAAAGTGGAAAGTGGCGG+TGG 0.589178 3_4:+48516155 Msa0504270:CDS
TGTTGATCTTGTTCAAAAGG+AGG 0.589704 3_4:+48523218 Msa0504270:CDS
TGAAACCTTAGGTTCCGCCC+CGG 0.589916 3_4:-48516296 None:intergenic
CAACGAAAGATCCACAAGAT+GGG 0.594321 3_4:+48516033 Msa0504270:CDS
AAAGTGTGGACATTGACATA+GGG 0.596465 3_4:-48523056 None:intergenic
GGAGGTGGCCGGAGTTACGG+TGG 0.596936 3_4:+48516176 Msa0504270:CDS
TGTCCACACTTTCTAGTGGT+GGG 0.597109 3_4:+48523067 Msa0504270:CDS
GACTCTATTAGCAAAGGCTG+TGG 0.597902 3_4:+48521165 Msa0504270:CDS
GTTGTTGCACGACATGAGGC+TGG 0.598300 3_4:+48522584 Msa0504270:CDS
GCCCGGAGTTTCGTTACCCG+GGG 0.603093 3_4:+48516279 Msa0504270:CDS
CGGAGTTTCGTTACCCGGGG+CGG 0.604794 3_4:+48516282 Msa0504270:CDS
GTGTAAGAGATCTCTTTGCA+AGG 0.606593 3_4:+48521266 Msa0504270:CDS
TGCAACTGCAGTACCTACTA+CGG 0.606970 3_4:-48522612 None:intergenic
ATTTCCATTTACCAGACCTG+TGG 0.610516 3_4:-48524267 None:intergenic
TGGTGTGGATGAAGCTAAAG+AGG 0.610821 3_4:+48520307 Msa0504270:CDS
GTTATGTTCAAGTTGAAAGG+TGG 0.611280 3_4:+48516406 Msa0504270:CDS
GAAGATGTTGGAGAATCAGG+TGG 0.614939 3_4:+48516549 Msa0504270:CDS
GGAACGACAAACCCATCTTG+TGG 0.615952 3_4:-48516044 None:intergenic
CCAAGACCCTCCAAAACAGT+AGG 0.616383 3_4:-48523297 None:intergenic
GTGGAAGCACCTGATAGGAT+CGG 0.618110 3_4:+48522032 Msa0504270:CDS
TATATTGCCAAGGTCAGGAG+GGG 0.618324 3_4:+48522816 Msa0504270:CDS
GCAACCGTTAGTTCAAGCAC+AGG 0.618526 3_4:+48516198 Msa0504270:CDS
AACAGAGTAAAAGTGGAAAG+TGG 0.619020 3_4:+48516149 Msa0504270:CDS
AAAGATGTTGGAGAGTGAGG+TGG 0.619088 3_4:+48518344 Msa0504270:CDS
ATTCACACAATCAATGCCAC+AGG 0.622711 3_4:+48524251 Msa0504270:three_prime_UTR
GGTGTTGGAAATGTTGGTGA+TGG 0.623390 3_4:+48516427 Msa0504270:CDS
GTATATTGCCAAGGTCAGGA+GGG 0.623407 3_4:+48522815 Msa0504270:CDS
CACCAGTGAAACCGATTCAG+AGG 0.624894 3_4:+48516066 Msa0504270:CDS
TGTTAATATGACATATGACT+GGG 0.626536 3_4:+48524333 Msa0504270:three_prime_UTR
TAAGGAGTTCTAATATCACT+TGG 0.626700 3_4:-48516523 None:intergenic
AAGCGCAGCAGCATAAAACA+AGG 0.626930 3_4:-48520047 None:intergenic
GAGTCTTGCCTGTCCCAGGA+AGG 0.627114 3_4:-48521147 None:intergenic
GAACCGGTATCATCAACAGC+CGG 0.630121 3_4:-48516094 None:intergenic
TCGTGAGGCAAAATTTCGCA+TGG 0.631448 3_4:+48521446 Msa0504270:CDS
TGTAAGAGATCTCTTTGCAA+GGG 0.632382 3_4:+48521267 Msa0504270:CDS
AGGCAAGACTCTATTAGCAA+AGG 0.633199 3_4:+48521159 Msa0504270:CDS
TCACCTGAGAAAAGTTTACA+GGG 0.634175 3_4:-48520090 None:intergenic
TCATAGAAGCAATGTCGCCA+AGG 0.635335 3_4:-48522118 None:intergenic
AGGGTGTTGTACCAAGTAAG+AGG 0.640950 3_4:+48516479 Msa0504270:CDS
GTAATGTTCAAGTTGAAAGG+TGG 0.642467 3_4:+48518201 Msa0504270:CDS
GGTGTTGAAAATGTTGGTGA+TGG 0.644288 3_4:+48518222 Msa0504270:CDS
TGCTGTCGCTAAAAGTCGTG+AGG 0.644788 3_4:+48521431 Msa0504270:CDS
AGCTGTTGTTGCACGACATG+AGG 0.649841 3_4:+48522580 Msa0504270:CDS
GCAACCTGATCCTTTCCCCA+AGG 0.649883 3_4:-48523114 None:intergenic
GATCCCACCACTAGAAAGTG+TGG 0.654135 3_4:-48523070 None:intergenic
TCAATGTCCACACTTTCTAG+TGG 0.654211 3_4:+48523063 Msa0504270:CDS
TAATTAGGCGAGGAAAGTGG+AGG 0.656543 3_4:+48518164 Msa0504270:intron
GATACCGGTTCAGGGAGCAA+CGG 0.660420 3_4:+48516106 Msa0504270:CDS
CTTGGTGCTCGTCCTCCTCG+CGG 0.663027 3_4:+48520526 Msa0504270:CDS
CACGGTCAAATCTTCCTGGA+CGG 0.663665 3_4:-48521698 None:intergenic
AAAGAGTTTACCTCAACACG+TGG 0.669101 3_4:-48522653 None:intergenic
AGGGTGAAGAGCTACAAAAG+TGG 0.669383 3_4:+48523915 Msa0504270:CDS
GGTGGGATCGATGAATCTGG+GGG 0.671837 3_4:+48523084 Msa0504270:CDS
TAATGAGGTGAAGAAAGTGG+AGG 0.675888 3_4:+48516369 Msa0504270:CDS
GGAGCAACGGTTCAGACCGG+AGG 0.676317 3_4:+48516119 Msa0504270:CDS
AGGGTGTTGCACCAACTAAG+AGG 0.677615 3_4:+48518274 Msa0504270:CDS
TTCCTGGACGGCGAACAGCA+GGG 0.682979 3_4:-48521686 None:intergenic
ATCCATAATATTTATCGACG+AGG 0.688964 3_4:+48521306 Msa0504270:CDS
AAGAAGGAATAAAACGACGT+GGG 0.689893 3_4:-48515958 None:intergenic
AAAGAGATCTCTTACACGAG+AGG 0.693569 3_4:-48521260 None:intergenic
AGAGTAAAAGTGGAAAGTGG+CGG 0.700091 3_4:+48516152 Msa0504270:CDS
GAAGAAGGAATAAAACGACG+TGG 0.713627 3_4:-48515959 None:intergenic
AGTACAAAGTCATCTGAACG+AGG 0.722314 3_4:+48520257 Msa0504270:CDS
TCTTGCAAACCTAGTAAACG+AGG 0.725490 3_4:+48522245 Msa0504270:CDS
GAATTACCCAGTGAAACCAG+TGG 0.728736 3_4:-48522141 None:intergenic
TTGGGTGTGAACAACAATGG+TGG 0.728856 3_4:-48515750 None:intergenic
GAATACATACCATAACTACA+CGG 0.737409 3_4:-48521716 None:intergenic
GCAGTGTGGAATGTAATTTG+GGG 0.751424 3_4:+48524073 Msa0504270:three_prime_UTR
CATACCAATAAAACACCGCG+AGG 0.758136 3_4:-48520541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTGAACAACAATGGTGGATG+AGG - chr3_4:48515747-48515766 None:intergenic 45.0%
TTGGGTGTGAACAACAATGG+TGG - chr3_4:48515753-48515772 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 48515660 48524452 48515660 ID=Msa0504270;Name=Msa0504270
chr3_4 mRNA 48515660 48524452 48515660 ID=Msa0504270-mRNA-1;Parent=Msa0504270;Name=Msa0504270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=191|0.85|0.93|1|0.92|0.86|15|382|873
chr3_4 exon 48515660 48516621 48515660 ID=Msa0504270-mRNA-1:exon:10430;Parent=Msa0504270-mRNA-1
chr3_4 exon 48518171 48518416 48518171 ID=Msa0504270-mRNA-1:exon:10431;Parent=Msa0504270-mRNA-1
chr3_4 exon 48520043 48520108 48520043 ID=Msa0504270-mRNA-1:exon:10432;Parent=Msa0504270-mRNA-1
chr3_4 exon 48520215 48520346 48520215 ID=Msa0504270-mRNA-1:exon:10433;Parent=Msa0504270-mRNA-1
chr3_4 exon 48520493 48520558 48520493 ID=Msa0504270-mRNA-1:exon:10434;Parent=Msa0504270-mRNA-1
chr3_4 exon 48521142 48521327 48521142 ID=Msa0504270-mRNA-1:exon:10435;Parent=Msa0504270-mRNA-1
chr3_4 exon 48521426 48521512 48521426 ID=Msa0504270-mRNA-1:exon:10436;Parent=Msa0504270-mRNA-1
chr3_4 exon 48521615 48521728 48521615 ID=Msa0504270-mRNA-1:exon:10437;Parent=Msa0504270-mRNA-1
chr3_4 exon 48522032 48522156 48522032 ID=Msa0504270-mRNA-1:exon:10438;Parent=Msa0504270-mRNA-1
chr3_4 exon 48522239 48522347 48522239 ID=Msa0504270-mRNA-1:exon:10439;Parent=Msa0504270-mRNA-1
chr3_4 exon 48522539 48522664 48522539 ID=Msa0504270-mRNA-1:exon:10440;Parent=Msa0504270-mRNA-1
chr3_4 exon 48522808 48523131 48522808 ID=Msa0504270-mRNA-1:exon:10441;Parent=Msa0504270-mRNA-1
chr3_4 exon 48523210 48523333 48523210 ID=Msa0504270-mRNA-1:exon:10442;Parent=Msa0504270-mRNA-1
chr3_4 exon 48523900 48524098 48523900 ID=Msa0504270-mRNA-1:exon:10443;Parent=Msa0504270-mRNA-1
chr3_4 exon 48524124 48524452 48524124 ID=Msa0504270-mRNA-1:exon:10444;Parent=Msa0504270-mRNA-1
chr3_4 five_prime_UTR 48515660 48515850 48515660 ID=Msa0504270-mRNA-1:five_prime_utr;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48515851 48516621 48515851 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48518171 48518416 48518171 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48520043 48520108 48520043 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48520215 48520346 48520215 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48520493 48520558 48520493 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48521142 48521327 48521142 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48521426 48521512 48521426 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48521615 48521728 48521615 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48522032 48522156 48522032 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48522239 48522347 48522239 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48522539 48522664 48522539 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48522808 48523131 48522808 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48523210 48523333 48523210 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 CDS 48523900 48524045 48523900 ID=Msa0504270-mRNA-1:cds;Parent=Msa0504270-mRNA-1
chr3_4 three_prime_UTR 48524046 48524098 48524046 ID=Msa0504270-mRNA-1:three_prime_utr;Parent=Msa0504270-mRNA-1
chr3_4 three_prime_UTR 48524124 48524452 48524124 ID=Msa0504270-mRNA-1:three_prime_utr;Parent=Msa0504270-mRNA-1
Gene Sequence

>Msa0504270

ATGTTACCTTTAGAGTACCACTTTCATTATCGATCTCCTTTAACCTATCAAAATTCACATCACCAAACATGTCAATTTTCCCGCCAAAATTCTAGGGTTTGTCCCAACCCACGTCGTTTTATTCCTTCTTCATGTCGTTTTCAATCTCAATTTTACAATTCACGAAGATTTGGATTGTGGGTCAACGAAAGATCCACAAGATGGGTTTGTCGTTCCACCAGTGAAACCGATTCAGAGGAAAAACCGGCTGTTGATGATACCGGTTCAGGGAGCAACGGTTCAGACCGGAGGAAGGAGAAACAGAGTAAAAGTGGAAAGTGGCGGTGGAGGTGGCCGGAGTTACGGTGGCAACCGTTAGTTCAAGCACAGGAGATTGGTGTTTTGCTTTTGCAGCTAGGGATGATGGTTTTTGTAATGAGGTTGATTCGGCCCGGAGTTTCGTTACCCGGGGCGGAACCTAAGGTTTCAACAACTTTTGTGAGTGTGCCTTATAGTGAGTTTTTGAGTAGGGTTAATGGTAATGAGGTGAAGAAAGTGGAGGTAGATGGGGTGAATGTTATGTTCAAGTTGAAAGGTGGTGTTGGAAATGTTGGTGATGGTGAAGTGTATGATTCAGAGTCTTTGGTGAAGGGTGTTGTACCAAGTAAGAGGATAGTTTATACTACAACAAGACCAAGTGATATTAGAACTCCTTATGAGAAGATGTTGGAGAATCAGGTGGAGTTTGGGTCGCCGGATAAGCGTTCTGGTGGATTCCTTAACTCTGCATTGGCGAGGAAAGTGGAGGTTGATGGGGTGAATGTAATGTTCAAGTTGAAAGGTGGTGTTGAAAATGTTGGTGATGGTGAAGTTCATGAATCAGATTCTTTGGTGAAGGGTGTTGCACCAACTAAGAGGATAGTTTATGCTACAACAAAGCCAAGTTATATTAGAACCCCTTATGAAAAGATGTTGGAGAGTGAGGTGGAGTTTGGGTCGCCGGATAAGTGTTCTGGTGGATTCTTTAACTTTGCGCTGATAGCCTTGTTTTATGCTGCTGCGCTTGCAGGGCTTCTCCAACGATTCCCTGTAAACTTTTCTCAGCATACTGCTGGTCAGATTCGGAATCGCAAATCAGGCACTGCCAGTACAAAGTCATCTGAACGAGGTGAAACAGTCACTTTTGCTGATATTGCTGGTGTGGATGAAGCTAAAGAGGAGCTAGAAGAGATTGTGGAATTTCTTCGAAATCCAGACAGATACACACGACTTGGTGCTCGTCCTCCTCGCGGTGTTTTATTGGCAGGCCTTCCTGGGACAGGCAAGACTCTATTAGCAAAGGCTGTGGCTGGGGAAGCTGATGTGCCATTTATAAGTTGTTCTGCTAGTGAGTTTGTAGAGTTGTATGTTGGCATGGGTGCCTCTCGTGTAAGAGATCTCTTTGCAAGGGCAAAAAGGGAAGCTCCATCCATAATATTTATCGACGAGATAGATGCTGTCGCTAAAAGTCGTGAGGCAAAATTTCGCATGGTCAGCAATGATGAACGAGAGCAAACTTTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGCAATTCTGCAGTGATAGTTCTTGGAGCTACTAATAGATCAGATGTCTTGGACCCTGCTGTTCGCCGTCCAGGAAGATTTGACCGTGTAGTTATGGTGGAAGCACCTGATAGGATCGGAAGAGAAGCAATCCTAAAAGTTCATGTTTCCAAAAAAGAACTTCCTTTAGCCAAGGATGTTGGCCTTGGCGACATTGCTTCTATGACCACTGGTTTCACTGGAGCAGATCTTGCAAACCTAGTAAACGAGGCTGCTTTACTAGCTGGAAGACAAAGTAAATCTGTAGTAGAGAAAATTGATTTCATTCATGCTGTAGAAAGATCAATAGCTGGCATAGAAAAGAAAACTGCCAAGTTGCAAGGAAGTGAGAAAGCTGTTGTTGCACGACATGAGGCTGGTCACGCCGTAGTAGGTACTGCAGTTGCAAAGCTTCTTCCTGGACAACCACGTGTTGAGAAATTAAGTATATTGCCAAGGTCAGGAGGGGCTTTGGGATTTACTTATACTCCGCCAACAAATGAGGATAGATATTTGCTATTCATTGACGAGTTGCTTGGTCGCCTGGTGACCCTTCTTGGAGGACGTGCAGCTGAAGAAGTTGTTTATTCTGGACGAGTTTCAACTGGTGCATTTGATGACATACGAAGAGCGACTGATATGGCATACAAGGCTATAGCTGAATATGGTCTTAATCAGACCATAGGCCCTATGTCAATGTCCACACTTTCTAGTGGTGGGATCGATGAATCTGGGGGTGCAGCTCCTTGGGGAAAGGATCAGGGAGACCTTGTTGATCTTGTTCAAAAGGAGGTGCAAACTTTACTGCAGTCTGCACTGGCTGTTGCTCTTTCCATTATCCGAGCAAATCCTACTGTTTTGGAGGGTCTTGGTGCTTACTTGGAAGAAAAGGAGAAAGTTGAGGGTGAAGAGCTACAAAAGTGGTTAAAATTGGTGGTTGCACCAACAGAGCTTGCTCTTTTCGTCAAAAGTACTCAAGCACCTCTTCTCCCATTGCAAGAGTCTCTTCTCCCATTGCAGACAAGTTTATGA
Protein sequence

>Msa0504270

MLPLEYHFHYRSPLTYQNSHHQTCQFSRQNSRVCPNPRRFIPSSCRFQSQFYNSRRFGLWVNERSTRWVCRSTSETDSEEKPAVDDTGSGSNGSDRRKEKQSKSGKWRWRWPELRWQPLVQAQEIGVLLLQLGMMVFVMRLIRPGVSLPGAEPKVSTTFVSVPYSEFLSRVNGNEVKKVEVDGVNVMFKLKGGVGNVGDGEVYDSESLVKGVVPSKRIVYTTTRPSDIRTPYEKMLENQVEFGSPDKRSGGFLNSALARKVEVDGVNVMFKLKGGVENVGDGEVHESDSLVKGVAPTKRIVYATTKPSYIRTPYEKMLESEVEFGSPDKCSGGFFNFALIALFYAAALAGLLQRFPVNFSQHTAGQIRNRKSGTASTKSSERGETVTFADIAGVDEAKEELEEIVEFLRNPDRYTRLGARPPRGVLLAGLPGTGKTLLAKAVAGEADVPFISCSASEFVELYVGMGASRVRDLFARAKREAPSIIFIDEIDAVAKSREAKFRMVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAVRRPGRFDRVVMVEAPDRIGREAILKVHVSKKELPLAKDVGLGDIASMTTGFTGADLANLVNEAALLAGRQSKSVVEKIDFIHAVERSIAGIEKKTAKLQGSEKAVVARHEAGHAVVGTAVAKLLPGQPRVEKLSILPRSGGALGFTYTPPTNEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRVSTGAFDDIRRATDMAYKAIAEYGLNQTIGPMSMSTLSSGGIDESGGAAPWGKDQGDLVDLVQKEVQTLLQSALAVALSIIRANPTVLEGLGAYLEEKEKVEGEELQKWLKLVVAPTELALFVKSTQAPLLPLQESLLPLQTSL*