Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412760 | XP_024635477.1 | 95.914 | 514 | 20 | 1 | 1 | 514 | 1 | 513 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412760 | A0A072UXC0 | 95.914 | 514 | 20 | 1 | 1 | 514 | 1 | 513 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003560 | Msa0412760 | 0.851908 | 6.530184e-61 | -8.615850e-47 |
| Msa0015100 | Msa0412760 | 0.802616 | 5.156568e-49 | -8.615850e-47 |
| Msa0138610 | Msa0412760 | 0.840216 | 9.937202e-58 | -8.615850e-47 |
| Msa0145710 | Msa0412760 | 0.845499 | 3.909754e-59 | -8.615850e-47 |
| Msa0213090 | Msa0412760 | 0.801744 | 7.793589e-49 | -8.615850e-47 |
| Msa0365080 | Msa0412760 | 0.896584 | 3.206195e-76 | -8.615850e-47 |
| Msa0404220 | Msa0412760 | 0.814349 | 1.612232e-51 | -8.615850e-47 |
| Msa0412760 | Msa0504270 | 0.811774 | 5.915834e-51 | -8.615850e-47 |
| Msa0412760 | Msa0504410 | 0.919285 | 5.445947e-87 | -8.615850e-47 |
| Msa0412760 | Msa0510560 | 0.804330 | 2.274621e-49 | -8.615850e-47 |
| Msa0412760 | Msa0530380 | 0.860493 | 1.987244e-63 | -8.615850e-47 |
| Msa0412760 | Msa0580390 | -0.867124 | 1.724631e-65 | -8.615850e-47 |
| Msa0412760 | Msa0587290 | 0.851139 | 1.077898e-60 | -8.615850e-47 |
| Msa0412760 | Msa0617850 | 0.800186 | 1.621789e-48 | -8.615850e-47 |
| Msa0412760 | Msa0627080 | 0.852873 | 3.469674e-61 | -8.615850e-47 |
| Msa0412760 | Msa0639030 | 0.808247 | 3.400982e-50 | -8.615850e-47 |
| Msa0412760 | Msa0665150 | 0.811100 | 8.290016e-51 | -8.615850e-47 |
| Msa0412760 | Msa0685880 | 0.807061 | 6.075571e-50 | -8.615850e-47 |
| Msa0412760 | Msa0697600 | 0.819926 | 8.984036e-53 | -8.615850e-47 |
| Msa0412760 | Msa0711850 | 0.806838 | 6.772312e-50 | -8.615850e-47 |
| Msa0412760 | Msa0795890 | -0.865940 | 4.099819e-65 | -8.615850e-47 |
| Msa0412760 | Msa0796950 | 0.832436 | 9.464876e-56 | -8.615850e-47 |
| Msa0412760 | Msa0833670 | -0.852747 | 3.768193e-61 | -8.615850e-47 |
| Msa0412760 | Msa0861560 | 0.800419 | 1.454437e-48 | -8.615850e-47 |
| Msa0412760 | Msa0883670 | 0.802380 | 5.766289e-49 | -8.615850e-47 |
| Msa0412760 | Msa1037020 | 0.805437 | 1.335637e-49 | -8.615850e-47 |
| Msa0412760 | Msa1113190 | 0.825690 | 4.084964e-54 | -8.615850e-47 |
| Msa0412760 | Msa1132860 | -0.866199 | 3.394103e-65 | -8.615850e-47 |
| Msa0412760 | Msa1164530 | 0.801941 | 7.101008e-49 | -8.615850e-47 |
| Msa0412760 | Msa1188820 | 0.800230 | 1.588643e-48 | -8.615850e-47 |
| Msa0412760 | Msa1190330 | 0.802340 | 5.877757e-49 | -8.615850e-47 |
| Msa0412760 | Msa1237260 | 0.814580 | 1.432916e-51 | -8.615850e-47 |
| Msa0412760 | Msa1317710 | 0.811019 | 8.630962e-51 | -8.615850e-47 |
| Msa0412760 | Msa1399700 | 0.802920 | 4.462278e-49 | -8.615850e-47 |
| Msa0412760 | Msa1424510 | 0.804482 | 2.114920e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412760 | MtrunA17_Chr3g0104511 | 95.914 | 514 | 20 | 1 | 1 | 514 | 1 | 513 | 0.0 | 937 |
| Msa0412760 | MtrunA17_Chr5g0436741 | 49.057 | 159 | 73 | 2 | 359 | 509 | 252 | 410 | 1.03e-43 | 159 |
| Msa0412760 | MtrunA17_Chr5g0436741 | 50.746 | 134 | 59 | 2 | 141 | 267 | 90 | 223 | 8.50e-34 | 132 |
| Msa0412760 | MtrunA17_Chr2g0333081 | 41.837 | 98 | 57 | 0 | 400 | 497 | 139 | 236 | 1.17e-18 | 86.3 |
| Msa0412760 | MtrunA17_Chr4g0063891 | 40.206 | 97 | 58 | 0 | 400 | 496 | 162 | 258 | 2.45e-17 | 82.8 |
| Msa0412760 | MtrunA17_Chr7g0262541 | 36.283 | 113 | 65 | 1 | 401 | 506 | 238 | 350 | 3.04e-17 | 83.6 |
| Msa0412760 | MtrunA17_Chr7g0262061 | 38.776 | 98 | 60 | 0 | 401 | 498 | 227 | 324 | 9.76e-17 | 81.6 |
| Msa0412760 | MtrunA17_Chr5g0411051 | 37.634 | 93 | 58 | 0 | 404 | 496 | 126 | 218 | 3.75e-15 | 75.5 |
| Msa0412760 | MtrunA17_Chr1g0186111 | 27.922 | 154 | 103 | 1 | 358 | 503 | 223 | 376 | 1.06e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0412760 | AT1G07280.3 | 53.394 | 545 | 204 | 16 | 8 | 513 | 15 | 548 | 1.66e-176 | 508 |
| Msa0412760 | AT1G07280.1 | 53.394 | 545 | 204 | 16 | 8 | 513 | 15 | 548 | 1.66e-176 | 508 |
| Msa0412760 | AT1G07280.2 | 53.394 | 545 | 204 | 16 | 8 | 513 | 15 | 548 | 1.66e-176 | 508 |
| Msa0412760 | AT2G29670.1 | 50.355 | 564 | 198 | 18 | 1 | 513 | 1 | 533 | 4.00e-159 | 463 |
| Msa0412760 | AT2G29670.2 | 50.355 | 564 | 198 | 18 | 1 | 513 | 1 | 533 | 4.00e-159 | 463 |
| Msa0412760 | AT1G07280.4 | 49.682 | 471 | 181 | 16 | 8 | 436 | 15 | 471 | 1.98e-126 | 378 |
| Msa0412760 | AT3G47080.1 | 42.385 | 545 | 227 | 15 | 10 | 514 | 17 | 514 | 5.75e-126 | 378 |
| Msa0412760 | AT4G17940.1 | 39.785 | 93 | 56 | 0 | 404 | 496 | 154 | 246 | 1.01e-16 | 80.9 |
| Msa0412760 | AT5G20190.1 | 38.776 | 98 | 60 | 0 | 400 | 497 | 156 | 253 | 1.09e-16 | 81.3 |
| Msa0412760 | AT1G80130.1 | 35.052 | 97 | 63 | 0 | 400 | 496 | 165 | 261 | 2.97e-11 | 65.1 |
| Msa0412760 | AT4G32340.1 | 35.789 | 95 | 60 | 1 | 404 | 497 | 114 | 208 | 4.93e-11 | 63.5 |
Find 108 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAAAACAAGATCAAAAT+TGG | 0.146495 | 3_2:-56453933 | Msa0412760:three_prime_UTR |
| CACGAATTTGTTTCGTGATT+TGG | 0.185372 | 3_2:+56456560 | None:intergenic |
| TTCACATACACCAACGTTAA+TGG | 0.200607 | 3_2:-56455935 | Msa0412760:CDS |
| AAATAATGCAATTATGGATT+TGG | 0.248943 | 3_2:-56456328 | Msa0412760:CDS |
| TCTTCACAGGTCTCGTTCTT+TGG | 0.254491 | 3_2:-56456493 | Msa0412760:CDS |
| GAACGAAAATAATGCAATTA+TGG | 0.275782 | 3_2:-56456334 | Msa0412760:CDS |
| TCTTGTTCTTCCGGTTCTTC+TGG | 0.286031 | 3_2:-56456276 | Msa0412760:CDS |
| ATTGTTATGCAGTTAGTTAT+AGG | 0.288336 | 3_2:-56453662 | Msa0412760:three_prime_UTR |
| TCTTCTTCCTCTTCTTGTAT+TGG | 0.302233 | 3_2:+56456455 | None:intergenic |
| GGCTGCAGAAGAGACTTATT+TGG | 0.302406 | 3_2:-56454095 | Msa0412760:CDS |
| ACTTCCTCTTCTTGTTCTTC+CGG | 0.317190 | 3_2:-56456285 | Msa0412760:CDS |
| ACAGAACTTGTTTATCAAAC+AGG | 0.327067 | 3_2:-56455457 | Msa0412760:CDS |
| AGCATAATTTGCAGCATAAT+AGG | 0.327559 | 3_2:+56454045 | None:intergenic |
| AAGAAGAAGAAACTAAGATA+TGG | 0.341917 | 3_2:-56455600 | Msa0412760:CDS |
| AACTAAGATATGGGAATCTA+TGG | 0.346469 | 3_2:-56455590 | Msa0412760:CDS |
| AATGGTGGTGTTTATAAAAC+CGG | 0.350156 | 3_2:-56455640 | Msa0412760:CDS |
| AGACCTGTGAAGAACAAAAT+TGG | 0.372971 | 3_2:+56456503 | None:intergenic |
| TTATTATAAGCTTCAGCATC+TGG | 0.373541 | 3_2:+56454157 | None:intergenic |
| GCAAGTAACAAAGCATTGTT+TGG | 0.387537 | 3_2:+56455421 | None:intergenic |
| ACTAAAACAAGATCAAAATT+GGG | 0.394468 | 3_2:-56453932 | Msa0412760:three_prime_UTR |
| AGTAATACTGCCTCGGTTGA+TGG | 0.395286 | 3_2:-56455736 | Msa0412760:CDS |
| CGTTGTTACTTGACATAGAA+TGG | 0.397116 | 3_2:+56455878 | None:intergenic |
| TCTTCCTCTTCTTGTATTGG+TGG | 0.400469 | 3_2:+56456458 | None:intergenic |
| TTGTTTCGTGATTTGGATGA+TGG | 0.417401 | 3_2:+56456567 | None:intergenic |
| CTCCGGTGGCTCAAAATTAA+CGG | 0.427707 | 3_2:+56456245 | None:intergenic |
| CTTCTTGTATTGGTGGAAAG+TGG | 0.431042 | 3_2:+56456465 | None:intergenic |
| ATTTGACGGGGATGGACAAA+CGG | 0.433726 | 3_2:-56455671 | Msa0412760:CDS |
| AAATATAAACCGGTGGGGAG+TGG | 0.442813 | 3_2:-56455694 | Msa0412760:CDS |
| TTCATCCACCTCAGTTTCCC+CGG | 0.445114 | 3_2:+56455621 | None:intergenic |
| TTTGACGGGGATGGACAAAC+GGG | 0.447656 | 3_2:-56455670 | Msa0412760:CDS |
| GGCATGAGAACCAGAAGAAC+CGG | 0.459143 | 3_2:+56456266 | None:intergenic |
| TTCTTGTATTGGTGGAAAGT+GGG | 0.467059 | 3_2:+56456466 | None:intergenic |
| GATTCTTGAAAGAGTGCAAA+AGG | 0.467494 | 3_2:-56455998 | Msa0412760:CDS |
| TTTAAAGAAACTTACTCAAA+CGG | 0.471650 | 3_2:+56457051 | None:intergenic |
| AATGAAACAATTTGTTTCGC+CGG | 0.474336 | 3_2:-56455524 | Msa0412760:CDS |
| GAGGAAGAAGAACAATAAGA+AGG | 0.486358 | 3_2:-56456443 | Msa0412760:CDS |
| GATTCAATCTTAGCAGAAAC+CGG | 0.486755 | 3_2:+56455505 | None:intergenic |
| ATAAATATGCAATGTTCTTG+TGG | 0.494374 | 3_2:-56454138 | Msa0412760:CDS |
| TTCAAGATTCTCAGCGAAAA+CGG | 0.494566 | 3_2:+56456177 | None:intergenic |
| TCCTCCGTCGTCAAACTCAC+CGG | 0.496712 | 3_2:-56457121 | Msa0412760:five_prime_UTR |
| GCCTCGGTTGATGGAGGAAG+TGG | 0.496999 | 3_2:-56455727 | Msa0412760:CDS |
| AGTATTACTTCCACTTGAAA+CGG | 0.497881 | 3_2:+56455750 | None:intergenic |
| AGAAGAAGAAACTAAGATAT+GGG | 0.504906 | 3_2:-56455599 | Msa0412760:CDS |
| TCTTGAGAAGAATCAGATAG+AGG | 0.509178 | 3_2:+56453983 | None:intergenic |
| TTATAGAAACGAAGAGGGAT+TGG | 0.510770 | 3_2:-56455557 | Msa0412760:CDS |
| GCAGCATAATAGGTGTTGCT+AGG | 0.514052 | 3_2:+56454055 | None:intergenic |
| TTTAGCTGCGGTTGCAACCC+CGG | 0.514830 | 3_2:-56455854 | Msa0412760:CDS |
| AAGGAAGAATTCAGAGATGT+TGG | 0.520097 | 3_2:-56456138 | Msa0412760:CDS |
| TCGTTGCACATGAATTTGAC+AGG | 0.520886 | 3_2:-56455375 | Msa0412760:intron |
| GGGAGTGGATTTGACGGGGA+TGG | 0.521084 | 3_2:-56455679 | Msa0412760:CDS |
| CCGGTGGGGAGTGGATTTGA+CGG | 0.530493 | 3_2:-56455685 | Msa0412760:CDS |
| TCACGGCGGAGAGATTATTC+CGG | 0.539322 | 3_2:+56457102 | None:intergenic |
| TGCAGAAGAGACTTATTTGG+AGG | 0.539439 | 3_2:-56454092 | Msa0412760:CDS |
| CAGAACTTGTTTATCAAACA+GGG | 0.550923 | 3_2:-56455456 | Msa0412760:CDS |
| CCGCGGTGGGAAATATAAAC+CGG | 0.553139 | 3_2:-56455704 | Msa0412760:CDS |
| ATGGTGGTGTTTATAAAACC+GGG | 0.553717 | 3_2:-56455639 | Msa0412760:CDS |
| GAAACTTACTCAAACGGTGG+TGG | 0.555885 | 3_2:+56457057 | None:intergenic |
| GATGGAGGAAGTGGCCGCGG+TGG | 0.560003 | 3_2:-56455718 | Msa0412760:CDS |
| CCTGTGAAGAACAAAATTGG+TGG | 0.560358 | 3_2:+56456506 | None:intergenic |
| CAAATCACGAAACAAATTCG+TGG | 0.561853 | 3_2:-56456559 | Msa0412760:CDS |
| CTTTCCACCAATACAAGAAG+AGG | 0.562841 | 3_2:-56456462 | Msa0412760:CDS |
| ATGGAGGAAGTGGCCGCGGT+GGG | 0.564800 | 3_2:-56455717 | Msa0412760:CDS |
| ATGGGAATCTATGGTTGAAG+AGG | 0.565563 | 3_2:-56455581 | Msa0412760:CDS |
| CTTCAAGAGAGCTATAGAAG+TGG | 0.567749 | 3_2:-56454185 | Msa0412760:CDS |
| AGGAAGAAGAACAATAAGAA+GGG | 0.569239 | 3_2:-56456442 | Msa0412760:CDS |
| GTTGATGGAGGAAGTGGCCG+CGG | 0.570618 | 3_2:-56455721 | Msa0412760:CDS |
| AAGTGGAAGTAATACTGCCT+CGG | 0.571756 | 3_2:-56455743 | Msa0412760:CDS |
| CGATCGAAGAAGTCTCCACC+GGG | 0.571840 | 3_2:+56455836 | None:intergenic |
| AGAACCGGAAGAACAAGAAG+AGG | 0.572363 | 3_2:+56456281 | None:intergenic |
| AAAACGTTCTCCGTTTCAAG+TGG | 0.573365 | 3_2:-56455760 | Msa0412760:CDS |
| TCCGGTGAGTTTGACGACGG+AGG | 0.580178 | 3_2:+56457120 | None:intergenic |
| CGGTGGGGAGTGGATTTGAC+GGG | 0.580234 | 3_2:-56455684 | Msa0412760:CDS |
| CATGTGTGTGATGTATATAT+AGG | 0.585091 | 3_2:+56457192 | None:intergenic |
| CTAAAACAAGATCAAAATTG+GGG | 0.585959 | 3_2:-56453931 | Msa0412760:three_prime_UTR |
| TTATAAGCTTCAGCATCTGG+TGG | 0.586028 | 3_2:+56454160 | None:intergenic |
| ATGAAGAAAATATGAATCTG+AGG | 0.586541 | 3_2:+56456711 | None:intergenic |
| TTTCACTTTACAAATGAGAG+AGG | 0.591681 | 3_2:-56456046 | Msa0412760:CDS |
| GGTGGATCGAAACAAATTCG+TGG | 0.595714 | 3_2:+56456524 | None:intergenic |
| CCGTCAAATCCACTCCCCAC+CGG | 0.599440 | 3_2:+56455685 | None:intergenic |
| ACGATCGAAGAAGTCTCCAC+CGG | 0.601465 | 3_2:+56455835 | None:intergenic |
| GTGGATCGAAACAAATTCGT+GGG | 0.604278 | 3_2:+56456525 | None:intergenic |
| AAAGAAACTTACTCAAACGG+TGG | 0.605610 | 3_2:+56457054 | None:intergenic |
| AAATCACGAAACAAATTCGT+GGG | 0.608197 | 3_2:-56456558 | Msa0412760:CDS |
| TTCACCTCAACCCATCCCCA+TGG | 0.614582 | 3_2:+56453821 | None:intergenic |
| GAGGCTTATAGAAACGAAGA+GGG | 0.619193 | 3_2:-56455562 | Msa0412760:CDS |
| TCTATGGAATACTGGTGGAG+AGG | 0.619309 | 3_2:-56454017 | Msa0412760:CDS |
| TAAAACCGGGGAAACTGAGG+TGG | 0.619798 | 3_2:-56455626 | Msa0412760:CDS |
| GCTAGTGTTTGTGATGAAGA+TGG | 0.620714 | 3_2:+56456606 | None:intergenic |
| CGGTGGGAAATATAAACCGG+TGG | 0.621319 | 3_2:-56455701 | Msa0412760:CDS |
| GGTGGGAAATATAAACCGGT+GGG | 0.628312 | 3_2:-56455700 | Msa0412760:CDS |
| ATTATCGCTGGTATAAACTC+CGG | 0.629792 | 3_2:+56456228 | None:intergenic |
| AGAGGCTTATAGAAACGAAG+AGG | 0.630772 | 3_2:-56455563 | Msa0412760:CDS |
| ATCGCTGGTATAAACTCCGG+TGG | 0.635655 | 3_2:+56456231 | None:intergenic |
| AAGTAACAACGCTTTAGCTG+CGG | 0.636246 | 3_2:-56455866 | Msa0412760:CDS |
| AATACTGCCTCGGTTGATGG+AGG | 0.639281 | 3_2:-56455733 | Msa0412760:CDS |
| GCCACTTCCTCCATCAACCG+AGG | 0.643564 | 3_2:+56455726 | None:intergenic |
| AGCTGCGGTTGCAACCCCGG+TGG | 0.647798 | 3_2:-56455851 | Msa0412760:CDS |
| TTATAAAACCGGGGAAACTG+AGG | 0.650462 | 3_2:-56455629 | Msa0412760:CDS |
| TGAACGAAAAGCGAATAGCG+TGG | 0.660919 | 3_2:-56456205 | Msa0412760:CDS |
| ATAACATAAACCATTAACGT+TGG | 0.667251 | 3_2:+56455925 | None:intergenic |
| TGGTGGTGTTTATAAAACCG+GGG | 0.688559 | 3_2:-56455638 | Msa0412760:CDS |
| TAAAACAAGATCAAAATTGG+GGG | 0.697852 | 3_2:-56453930 | Msa0412760:three_prime_UTR |
| TATTCCGGTGAGTTTGACGA+CGG | 0.700296 | 3_2:+56457117 | None:intergenic |
| CCGGTTTATATTTCCCACCG+CGG | 0.731142 | 3_2:+56455704 | None:intergenic |
| GTGGGAAATATAAACCGGTG+GGG | 0.746911 | 3_2:-56455699 | Msa0412760:CDS |
| GGTGGGGAGTGGATTTGACG+GGG | 0.753129 | 3_2:-56455683 | Msa0412760:CDS |
| TTGGTGATGTAATATCACGG+CGG | 0.820679 | 3_2:+56457088 | None:intergenic |
| GATCGAAGAAGTCTCCACCG+GGG | 0.831475 | 3_2:+56455837 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTATATTTAAAGAAAAAA+TGG | + | chr3_2:56453862-56453881 | None:intergenic | 10.0% |
| !!! | TTTTAATTTTTTTTTTTTGC+AGG | - | chr3_2:56454073-56454092 | Msa0412760:CDS | 10.0% |
| !!! | TGTTTTTTCTTTTTCAATTA+AGG | + | chr3_2:56454204-56454223 | None:intergenic | 15.0% |
| !! | TTGAAAAAGAAAAAACATTA+TGG | - | chr3_2:56454207-56454226 | Msa0412760:intron | 15.0% |
| !! | TGAAAAAGAAAAAACATTAT+GGG | - | chr3_2:56454208-56454227 | Msa0412760:intron | 15.0% |
| !!! | TTTCTTATAATAGTATTGAA+GGG | + | chr3_2:56455882-56455901 | None:intergenic | 15.0% |
| !!! | TTTTCTTATAATAGTATTGA+AGG | + | chr3_2:56455883-56455902 | None:intergenic | 15.0% |
| !!! | TTTGATTTTTTTTTTTTCCA+TGG | - | chr3_2:56457042-56457061 | Msa0412760:intron | 15.0% |
| !!! | TTGATTTTTTTTTTTTCCAT+GGG | - | chr3_2:56457043-56457062 | Msa0412760:intron | 15.0% |
| !! | TTTAAAGAAACTTACTCAAA+CGG | + | chr3_2:56453832-56453851 | None:intergenic | 20.0% |
| !! | ATTACAAAAGCCATAAAAAT+AGG | + | chr3_2:56453996-56454015 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGCAGGTTAAA+AGG | - | chr3_2:56454081-56454100 | Msa0412760:CDS | 20.0% |
| !!! | GATGAAACTTTTATACAAAT+TGG | + | chr3_2:56454142-56454161 | None:intergenic | 20.0% |
| !! | AAATAATGCAATTATGGATT+TGG | - | chr3_2:56454552-56454571 | Msa0412760:intron | 20.0% |
| !!! | TTTTGTATGAAGATTTACAA+GGG | - | chr3_2:56454860-56454879 | Msa0412760:intron | 20.0% |
| !! | AAAAAAATGAAAAGATTCCA+TGG | + | chr3_2:56455548-56455567 | None:intergenic | 20.0% |
| !! | AGACTATACTATTGAAATTT+AGG | - | chr3_2:56455733-56455752 | Msa0412760:CDS | 20.0% |
| !! | TAGGATTTGAATTGAAAAAT+AGG | - | chr3_2:56455752-56455771 | Msa0412760:CDS | 20.0% |
| !!! | AATTGAAAAATAGGTGTTAT+TGG | - | chr3_2:56455761-56455780 | Msa0412760:CDS | 20.0% |
| !!! | ATTGAAAAATAGGTGTTATT+GGG | - | chr3_2:56455762-56455781 | Msa0412760:CDS | 20.0% |
| !! | ATGAATGAATTAACTTTACA+TGG | - | chr3_2:56456087-56456106 | Msa0412760:CDS | 20.0% |
| !!! | ATCTGATTTTATTCCATAAT+TGG | + | chr3_2:56456290-56456309 | None:intergenic | 20.0% |
| !!! | AGATTTATTATGCTATTTTG+AGG | - | chr3_2:56456306-56456325 | Msa0412760:CDS | 20.0% |
| !!! | TTTTTTCCTTCTTCTATTTT+TGG | + | chr3_2:56456341-56456360 | None:intergenic | 20.0% |
| !! | CTTATGAAAAATCATGTAAT+TGG | + | chr3_2:56456540-56456559 | None:intergenic | 20.0% |
| !!! | CAATTACATGATTTTTCATA+AGG | - | chr3_2:56456538-56456557 | Msa0412760:CDS | 20.0% |
| !!! | AGTTGTATAATTGACAATTT+TGG | - | chr3_2:56456639-56456658 | Msa0412760:CDS | 20.0% |
| !!! | CTTGTTTTAGTTGATTATTA+TGG | + | chr3_2:56456939-56456958 | None:intergenic | 20.0% |
| !! | AACTAAAACAAGATCAAAAT+TGG | - | chr3_2:56456947-56456966 | Msa0412760:intron | 20.0% |
| !! | ACTAAAACAAGATCAAAATT+GGG | - | chr3_2:56456948-56456967 | Msa0412760:intron | 20.0% |
| !!! | TGATTTTTTTTTTTTCCATG+GGG | - | chr3_2:56457044-56457063 | Msa0412760:intron | 20.0% |
| !!! | AGTGAATCTTTTTGATTTTA+TGG | - | chr3_2:56457156-56457175 | Msa0412760:five_prime_UTR | 20.0% |
| ! | ATATAGGCAAAGAAGAAAAA+TGG | + | chr3_2:56453675-56453694 | None:intergenic | 25.0% |
| !!! | TTTTTGGTGATGTAATATCA+CGG | + | chr3_2:56453798-56453817 | None:intergenic | 25.0% |
| ! | TTAACACACTTTAATTCTCT+TGG | - | chr3_2:56453939-56453958 | Msa0412760:three_prime_UTR | 25.0% |
| !!! | GTTATACGATCCTATTTTTA+TGG | - | chr3_2:56453983-56454002 | Msa0412760:CDS | 25.0% |
| !! | TTTTGTGGTTTTTGTTCAAA+AGG | - | chr3_2:56454110-56454129 | Msa0412760:CDS | 25.0% |
| !! | TTTGTGGTTTTTGTTCAAAA+GGG | - | chr3_2:56454111-56454130 | Msa0412760:CDS | 25.0% |
| ! | ATGAAGAAAATATGAATCTG+AGG | + | chr3_2:56454172-56454191 | None:intergenic | 25.0% |
| ! | GAACGAAAATAATGCAATTA+TGG | - | chr3_2:56454546-56454565 | Msa0412760:intron | 25.0% |
| !! | CTTTTGTATGAAGATTTACA+AGG | - | chr3_2:56454859-56454878 | Msa0412760:intron | 25.0% |
| ! | ATAACATAAACCATTAACGT+TGG | + | chr3_2:56454958-56454977 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAACTAAGATA+TGG | - | chr3_2:56455280-56455299 | Msa0412760:intron | 25.0% |
| ! | AGAAGAAGAAACTAAGATAT+GGG | - | chr3_2:56455281-56455300 | Msa0412760:intron | 25.0% |
| ! | GACTAGATACATCAATTATT+TGG | + | chr3_2:56455949-56455968 | None:intergenic | 25.0% |
| !!! | TAGTTTGTATTTTAAGCTAC+CGG | - | chr3_2:56456212-56456231 | Msa0412760:CDS | 25.0% |
| !!! | AATTTGCATTGGAGATTTTT+TGG | - | chr3_2:56456253-56456272 | Msa0412760:CDS | 25.0% |
| ! | ATCTAACCAAAAATAGAAGA+AGG | - | chr3_2:56456332-56456351 | Msa0412760:CDS | 25.0% |
| !! | TGTATGCTTTTGAATATTCA+GGG | - | chr3_2:56456662-56456681 | Msa0412760:exon | 25.0% |
| ! | ATAAATATGCAATGTTCTTG+TGG | - | chr3_2:56456742-56456761 | Msa0412760:five_prime_UTR | 25.0% |
| !! | GAAAGTGAAAAATGATTTGT+GGG | - | chr3_2:56456764-56456783 | Msa0412760:five_prime_UTR | 25.0% |
| !! | CAAATTATGCTCATTTTCTA+TGG | - | chr3_2:56456847-56456866 | Msa0412760:intron | 25.0% |
| ! | CTAAAACAAGATCAAAATTG+GGG | - | chr3_2:56456949-56456968 | Msa0412760:intron | 25.0% |
| ! | TAAAACAAGATCAAAATTGG+GGG | - | chr3_2:56456950-56456969 | Msa0412760:intron | 25.0% |
| ! | ATTGTTATGCAGTTAGTTAT+AGG | - | chr3_2:56457218-56457237 | Msa0412760:five_prime_UTR | 25.0% |
| CATGTGTGTGATGTATATAT+AGG | + | chr3_2:56453691-56453710 | None:intergenic | 30.0% | |
| ! | GTTAAAAGGAAGACTTTTTG+TGG | - | chr3_2:56454095-56454114 | Msa0412760:CDS | 30.0% |
| AAAAAACATTATGGGACTTG+AGG | - | chr3_2:56454216-56454235 | Msa0412760:intron | 30.0% | |
| AAATCACGAAACAAATTCGT+GGG | - | chr3_2:56454322-56454341 | Msa0412760:intron | 30.0% | |
| AGGAAGAAGAACAATAAGAA+GGG | - | chr3_2:56454438-56454457 | Msa0412760:intron | 30.0% | |
| ! | CATTATTTTCGTTCGAGATT+TGG | + | chr3_2:56454540-56454559 | None:intergenic | 30.0% |
| !! | GAAGAAAGCTTTTTCTTCTA+TGG | - | chr3_2:56454786-56454805 | Msa0412760:intron | 30.0% |
| TTTCACTTTACAAATGAGAG+AGG | - | chr3_2:56454834-56454853 | Msa0412760:intron | 30.0% | |
| AGTATTACTTCCACTTGAAA+CGG | + | chr3_2:56455133-56455152 | None:intergenic | 30.0% | |
| ! | AATGGTGGTGTTTATAAAAC+CGG | - | chr3_2:56455240-56455259 | Msa0412760:intron | 30.0% |
| AACTAAGATATGGGAATCTA+TGG | - | chr3_2:56455290-56455309 | Msa0412760:intron | 30.0% | |
| ! | AATGAAACAATTTGTTTCGC+CGG | - | chr3_2:56455356-56455375 | Msa0412760:intron | 30.0% |
| ! | ACAGAACTTGTTTATCAAAC+AGG | - | chr3_2:56455423-56455442 | Msa0412760:CDS | 30.0% |
| ! | CAGAACTTGTTTATCAAACA+GGG | - | chr3_2:56455424-56455443 | Msa0412760:CDS | 30.0% |
| TGAAAAGATTCCATGGAATT+TGG | + | chr3_2:56455541-56455560 | None:intergenic | 30.0% | |
| ! | TTCATTTTACCTCCCAATTT+TGG | - | chr3_2:56455587-56455606 | Msa0412760:CDS | 30.0% |
| TGTTGCTATAATCCTATTGT+TGG | - | chr3_2:56455708-56455727 | Msa0412760:CDS | 30.0% | |
| AGTATAGTCTAACCAACAAT+AGG | + | chr3_2:56455723-56455742 | None:intergenic | 30.0% | |
| ATGCACTAAACAATTTGCAT+TGG | - | chr3_2:56456242-56456261 | Msa0412760:CDS | 30.0% | |
| GTCTTGATGAATATTGAAAG+AGG | - | chr3_2:56456376-56456395 | Msa0412760:CDS | 30.0% | |
| AATATTGAAAGAGGAGTTTG+CGG | - | chr3_2:56456385-56456404 | Msa0412760:CDS | 30.0% | |
| !!! | TATTTTCTTTTGAGACACGA+GGG | + | chr3_2:56456478-56456497 | None:intergenic | 30.0% |
| !!! | ATATTTTCTTTTGAGACACG+AGG | + | chr3_2:56456479-56456498 | None:intergenic | 30.0% |
| ! | GTGTATGCTTTTGAATATTC+AGG | - | chr3_2:56456661-56456680 | Msa0412760:exon | 30.0% |
| TTATTATAAGCTTCAGCATC+TGG | + | chr3_2:56456726-56456745 | None:intergenic | 30.0% | |
| GGAAAGTGAAAAATGATTTG+TGG | - | chr3_2:56456763-56456782 | Msa0412760:five_prime_UTR | 30.0% | |
| ! | AGCATAATTTGCAGCATAAT+AGG | + | chr3_2:56456838-56456857 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTCCATGGGGA+TGG | - | chr3_2:56457048-56457067 | Msa0412760:intron | 30.0% |
| !!! | TTTTTTTTTTCCATGGGGAT+GGG | - | chr3_2:56457049-56457068 | Msa0412760:intron | 30.0% |
| GCTTCAGTCATATCGAAAAA+AGG | + | chr3_2:56453721-56453740 | None:intergenic | 35.0% | |
| AAAGAAACTTACTCAAACGG+TGG | + | chr3_2:56453829-56453848 | None:intergenic | 35.0% | |
| ! | TTGTTTCGTGATTTGGATGA+TGG | + | chr3_2:56454316-56454335 | None:intergenic | 35.0% |
| ! | CACGAATTTGTTTCGTGATT+TGG | + | chr3_2:56454323-56454342 | None:intergenic | 35.0% |
| CAAATCACGAAACAAATTCG+TGG | - | chr3_2:56454321-56454340 | Msa0412760:intron | 35.0% | |
| AGACCTGTGAAGAACAAAAT+TGG | + | chr3_2:56454380-56454399 | None:intergenic | 35.0% | |
| ! | TTCTTGTATTGGTGGAAAGT+GGG | + | chr3_2:56454417-56454436 | None:intergenic | 35.0% |
| TCTTCTTCCTCTTCTTGTAT+TGG | + | chr3_2:56454428-56454447 | None:intergenic | 35.0% | |
| GAGGAAGAAGAACAATAAGA+AGG | - | chr3_2:56454437-56454456 | Msa0412760:intron | 35.0% | |
| ATTATCGCTGGTATAAACTC+CGG | + | chr3_2:56454655-56454674 | None:intergenic | 35.0% | |
| TTCAAGATTCTCAGCGAAAA+CGG | + | chr3_2:56454706-56454725 | None:intergenic | 35.0% | |
| GAAAAAGAAACTGAAGCTGA+AGG | - | chr3_2:56454723-56454742 | Msa0412760:intron | 35.0% | |
| AAGGAAGAATTCAGAGATGT+TGG | - | chr3_2:56454742-56454761 | Msa0412760:intron | 35.0% | |
| ! | GATTCTTGAAAGAGTGCAAA+AGG | - | chr3_2:56454882-56454901 | Msa0412760:intron | 35.0% |
| ! | AAATGCACGCTTCTTTTGTT+TGG | - | chr3_2:56454905-56454924 | Msa0412760:intron | 35.0% |
| TTCACATACACCAACGTTAA+TGG | - | chr3_2:56454945-56454964 | Msa0412760:intron | 35.0% | |
| ! | CGTTGTTACTTGACATAGAA+TGG | + | chr3_2:56455005-56455024 | None:intergenic | 35.0% |
| ! | ATGGTGGTGTTTATAAAACC+GGG | - | chr3_2:56455241-56455260 | Msa0412760:intron | 35.0% |
| TTATAGAAACGAAGAGGGAT+TGG | - | chr3_2:56455323-56455342 | Msa0412760:intron | 35.0% | |
| GATTCAATCTTAGCAGAAAC+CGG | + | chr3_2:56455378-56455397 | None:intergenic | 35.0% | |
| !! | GCAAGTAACAAAGCATTGTT+TGG | + | chr3_2:56455462-56455481 | None:intergenic | 35.0% |
| TGCGTATATTCCAAATTCCA+TGG | - | chr3_2:56455528-56455547 | Msa0412760:CDS | 35.0% | |
| CCAATGAAGCTACCAAAATT+GGG | + | chr3_2:56455602-56455621 | None:intergenic | 35.0% | |
| ACCAATGAAGCTACCAAAAT+TGG | + | chr3_2:56455603-56455622 | None:intergenic | 35.0% | |
| TGTTTAGTGCATCTAGAAAC+CGG | + | chr3_2:56456234-56456253 | None:intergenic | 35.0% | |
| ! | GGAGCTAAGTTTTCCAATTA+TGG | - | chr3_2:56456274-56456293 | Msa0412760:CDS | 35.0% |
| ATGTAATTGGTACGACTGAA+AGG | + | chr3_2:56456527-56456546 | None:intergenic | 35.0% | |
| ! | GCTCATTTTCTATGGAATAC+TGG | - | chr3_2:56456855-56456874 | Msa0412760:intron | 35.0% |
| ! | CATTTTCTATGGAATACTGG+TGG | - | chr3_2:56456858-56456877 | Msa0412760:intron | 35.0% |
| TCTTGAGAAGAATCAGATAG+AGG | + | chr3_2:56456900-56456919 | None:intergenic | 35.0% | |
| !! | TTGGTGATGTAATATCACGG+CGG | + | chr3_2:56453795-56453814 | None:intergenic | 40.0% |
| !!! | AACGGTGGTGGAAATGTTTT+TGG | + | chr3_2:56453814-56453833 | None:intergenic | 40.0% |
| ! | CTCGTCTAAGACGGAAAAAT+GGG | + | chr3_2:56453884-56453903 | None:intergenic | 40.0% |
| ! | ACTCGTCTAAGACGGAAAAA+TGG | + | chr3_2:56453885-56453904 | None:intergenic | 40.0% |
| TGTTTGTCACTCGTCTAAGA+CGG | + | chr3_2:56453893-56453912 | None:intergenic | 40.0% | |
| GCTAGTGTTTGTGATGAAGA+TGG | + | chr3_2:56454277-56454296 | None:intergenic | 40.0% | |
| GTGGATCGAAACAAATTCGT+GGG | + | chr3_2:56454358-56454377 | None:intergenic | 40.0% | |
| CCTGTGAAGAACAAAATTGG+TGG | + | chr3_2:56454377-56454396 | None:intergenic | 40.0% | |
| ! | CCACCAATTTTGTTCTTCAC+AGG | - | chr3_2:56454374-56454393 | Msa0412760:intron | 40.0% |
| ! | CTTCTTGTATTGGTGGAAAG+TGG | + | chr3_2:56454418-56454437 | None:intergenic | 40.0% |
| CTTTCCACCAATACAAGAAG+AGG | - | chr3_2:56454418-56454437 | Msa0412760:intron | 40.0% | |
| TCTTCCTCTTCTTGTATTGG+TGG | + | chr3_2:56454425-56454444 | None:intergenic | 40.0% | |
| ACTTCCTCTTCTTGTTCTTC+CGG | - | chr3_2:56454595-56454614 | Msa0412760:intron | 40.0% | |
| ! | GCTTTTCGTTCAATTATCGC+TGG | + | chr3_2:56454667-56454686 | None:intergenic | 40.0% |
| AAGTAACAACGCTTTAGCTG+CGG | - | chr3_2:56455014-56455033 | Msa0412760:intron | 40.0% | |
| AAAACGTTCTCCGTTTCAAG+TGG | - | chr3_2:56455120-56455139 | Msa0412760:intron | 40.0% | |
| AAGTGGAAGTAATACTGCCT+CGG | - | chr3_2:56455137-56455156 | Msa0412760:intron | 40.0% | |
| !! | GGACAAACGGGTTTTTCTAA+TGG | - | chr3_2:56455222-56455241 | Msa0412760:intron | 40.0% |
| !! | CAAACGGGTTTTTCTAATGG+TGG | - | chr3_2:56455225-56455244 | Msa0412760:intron | 40.0% |
| ! | TGGTGGTGTTTATAAAACCG+GGG | - | chr3_2:56455242-56455261 | Msa0412760:intron | 40.0% |
| TTATAAAACCGGGGAAACTG+AGG | - | chr3_2:56455251-56455270 | Msa0412760:intron | 40.0% | |
| ATGGGAATCTATGGTTGAAG+AGG | - | chr3_2:56455299-56455318 | Msa0412760:intron | 40.0% | |
| AGAGGCTTATAGAAACGAAG+AGG | - | chr3_2:56455317-56455336 | Msa0412760:intron | 40.0% | |
| GAGGCTTATAGAAACGAAGA+GGG | - | chr3_2:56455318-56455337 | Msa0412760:intron | 40.0% | |
| TCGTTGCACATGAATTTGAC+AGG | - | chr3_2:56455505-56455524 | Msa0412760:CDS | 40.0% | |
| ATGAAGCTACCAAAATTGGG+AGG | + | chr3_2:56455599-56455618 | None:intergenic | 40.0% | |
| !! | CCCAATTTTGGTAGCTTCAT+TGG | - | chr3_2:56455599-56455618 | Msa0412760:CDS | 40.0% |
| ! | ATAAGTCTGGCTCATGAATC+AGG | + | chr3_2:56456434-56456453 | None:intergenic | 40.0% |
| GGAGGAGAAGTAAATAAGTC+TGG | + | chr3_2:56456447-56456466 | None:intergenic | 40.0% | |
| CTTCAAGAGAGCTATAGAAG+TGG | - | chr3_2:56456695-56456714 | Msa0412760:five_prime_UTR | 40.0% | |
| TTATAAGCTTCAGCATCTGG+TGG | + | chr3_2:56456723-56456742 | None:intergenic | 40.0% | |
| TGCAGAAGAGACTTATTTGG+AGG | - | chr3_2:56456788-56456807 | Msa0412760:five_prime_UTR | 40.0% | |
| TATTCCGGTGAGTTTGACGA+CGG | + | chr3_2:56453766-56453785 | None:intergenic | 45.0% | |
| GAAACTTACTCAAACGGTGG+TGG | + | chr3_2:56453826-56453845 | None:intergenic | 45.0% | |
| GGATCGTATAACAAAGCTCG+AGG | + | chr3_2:56453975-56453994 | None:intergenic | 45.0% | |
| GGTGGATCGAAACAAATTCG+TGG | + | chr3_2:56454359-56454378 | None:intergenic | 45.0% | |
| TCTTCACAGGTCTCGTTCTT+TGG | - | chr3_2:56454387-56454406 | Msa0412760:intron | 45.0% | |
| AGAACCGGAAGAACAAGAAG+AGG | + | chr3_2:56454602-56454621 | None:intergenic | 45.0% | |
| TCTTGTTCTTCCGGTTCTTC+TGG | - | chr3_2:56454604-56454623 | Msa0412760:intron | 45.0% | |
| ! | TGCCGTTAATTTTGAGCCAC+CGG | - | chr3_2:56454633-56454652 | Msa0412760:intron | 45.0% |
| CTCCGGTGGCTCAAAATTAA+CGG | + | chr3_2:56454638-56454657 | None:intergenic | 45.0% | |
| TGAACGAAAAGCGAATAGCG+TGG | - | chr3_2:56454675-56454694 | Msa0412760:intron | 45.0% | |
| AGTAATACTGCCTCGGTTGA+TGG | - | chr3_2:56455144-56455163 | Msa0412760:intron | 45.0% | |
| GGTGGGAAATATAAACCGGT+GGG | - | chr3_2:56455180-56455199 | Msa0412760:intron | 45.0% | |
| GTGGGAAATATAAACCGGTG+GGG | - | chr3_2:56455181-56455200 | Msa0412760:intron | 45.0% | |
| AAATATAAACCGGTGGGGAG+TGG | - | chr3_2:56455186-56455205 | Msa0412760:intron | 45.0% | |
| ATTTGACGGGGATGGACAAA+CGG | - | chr3_2:56455209-56455228 | Msa0412760:intron | 45.0% | |
| GGCTGCAGAAGAGACTTATT+TGG | - | chr3_2:56456785-56456804 | Msa0412760:five_prime_UTR | 45.0% | |
| !! | GCAGCATAATAGGTGTTGCT+AGG | + | chr3_2:56456828-56456847 | None:intergenic | 45.0% |
| TCTATGGAATACTGGTGGAG+AGG | - | chr3_2:56456863-56456882 | Msa0412760:intron | 45.0% | |
| !! | TTTATATTTAAAGAAAAAAT+GGG | + | chr3_2:56453861-56453880 | None:intergenic | 5.0% |
| TCACGGCGGAGAGATTATTC+CGG | + | chr3_2:56453781-56453800 | None:intergenic | 50.0% | |
| GGCATGAGAACCAGAAGAAC+CGG | + | chr3_2:56454617-56454636 | None:intergenic | 50.0% | |
| ATCGCTGGTATAAACTCCGG+TGG | + | chr3_2:56454652-56454671 | None:intergenic | 50.0% | |
| ACGATCGAAGAAGTCTCCAC+CGG | + | chr3_2:56455048-56455067 | None:intergenic | 50.0% | |
| !! | AATACTGCCTCGGTTGATGG+AGG | - | chr3_2:56455147-56455166 | Msa0412760:intron | 50.0% |
| CCGGTTTATATTTCCCACCG+CGG | + | chr3_2:56455179-56455198 | None:intergenic | 50.0% | |
| CCGCGGTGGGAAATATAAAC+CGG | - | chr3_2:56455176-56455195 | Msa0412760:intron | 50.0% | |
| CGGTGGGAAATATAAACCGG+TGG | - | chr3_2:56455179-56455198 | Msa0412760:intron | 50.0% | |
| TTTGACGGGGATGGACAAAC+GGG | - | chr3_2:56455210-56455229 | Msa0412760:intron | 50.0% | |
| TAAAACCGGGGAAACTGAGG+TGG | - | chr3_2:56455254-56455273 | Msa0412760:intron | 50.0% | |
| TTCATCCACCTCAGTTTCCC+CGG | + | chr3_2:56455262-56455281 | None:intergenic | 50.0% | |
| GGCTCATGAATCAGGTACAC+TGG | + | chr3_2:56456426-56456445 | None:intergenic | 50.0% | |
| !!! | TTTTCCATGGGGATGGGTTG+AGG | - | chr3_2:56457055-56457074 | Msa0412760:intron | 50.0% |
| TCCTCCGTCGTCAAACTCAC+CGG | - | chr3_2:56453759-56453778 | Msa0412760:three_prime_UTR | 55.0% | |
| CGCGTCTGTGTGTGAGTTTC+AGG | + | chr3_2:56453919-56453938 | None:intergenic | 55.0% | |
| TTTAGCTGCGGTTGCAACCC+CGG | - | chr3_2:56455026-56455045 | Msa0412760:intron | 55.0% | |
| GATCGAAGAAGTCTCCACCG+GGG | + | chr3_2:56455046-56455065 | None:intergenic | 55.0% | |
| CGATCGAAGAAGTCTCCACC+GGG | + | chr3_2:56455047-56455066 | None:intergenic | 55.0% | |
| TTCACCTCAACCCATCCCCA+TGG | + | chr3_2:56457062-56457081 | None:intergenic | 55.0% | |
| TCCGGTGAGTTTGACGACGG+AGG | + | chr3_2:56453763-56453782 | None:intergenic | 60.0% | |
| !! | GCCTCGGTTGATGGAGGAAG+TGG | - | chr3_2:56455153-56455172 | Msa0412760:intron | 60.0% |
| GCCACTTCCTCCATCAACCG+AGG | + | chr3_2:56455157-56455176 | None:intergenic | 60.0% | |
| ! | GTTGATGGAGGAAGTGGCCG+CGG | - | chr3_2:56455159-56455178 | Msa0412760:intron | 60.0% |
| CCGTCAAATCCACTCCCCAC+CGG | + | chr3_2:56455198-56455217 | None:intergenic | 60.0% | |
| ! | CCGGTGGGGAGTGGATTTGA+CGG | - | chr3_2:56455195-56455214 | Msa0412760:intron | 60.0% |
| ! | CGGTGGGGAGTGGATTTGAC+GGG | - | chr3_2:56455196-56455215 | Msa0412760:intron | 60.0% |
| ! | GGTGGGGAGTGGATTTGACG+GGG | - | chr3_2:56455197-56455216 | Msa0412760:intron | 60.0% |
| ! | GGGAGTGGATTTGACGGGGA+TGG | - | chr3_2:56455201-56455220 | Msa0412760:intron | 60.0% |
| !! | TGAGACACGAGGGCATCACG+TGG | + | chr3_2:56456468-56456487 | None:intergenic | 60.0% |
| ATGGAGGAAGTGGCCGCGGT+GGG | - | chr3_2:56455163-56455182 | Msa0412760:intron | 65.0% | |
| !! | GACACGAGGGCATCACGTGG+AGG | + | chr3_2:56456465-56456484 | None:intergenic | 65.0% |
| AGCTGCGGTTGCAACCCCGG+TGG | - | chr3_2:56455029-56455048 | Msa0412760:intron | 70.0% | |
| GATGGAGGAAGTGGCCGCGG+TGG | - | chr3_2:56455162-56455181 | Msa0412760:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 56453655 | 56457247 | 56453655 | ID=Msa0412760;Name=Msa0412760 |
| chr3_2 | mRNA | 56453655 | 56457247 | 56453655 | ID=Msa0412760-mRNA-1;Parent=Msa0412760;Name=Msa0412760-mRNA-1;_AED=0.12;_eAED=0.12;_QI=313|1|1|1|0.5|0.33|3|321|514 |
| chr3_2 | exon | 56453655 | 56454219 | 56453655 | ID=Msa0412760-mRNA-1:exon:11514;Parent=Msa0412760-mRNA-1 |
| chr3_2 | exon | 56455376 | 56456807 | 56455376 | ID=Msa0412760-mRNA-1:exon:11513;Parent=Msa0412760-mRNA-1 |
| chr3_2 | exon | 56457066 | 56457247 | 56457066 | ID=Msa0412760-mRNA-1:exon:11512;Parent=Msa0412760-mRNA-1 |
| chr3_2 | five_prime_UTR | 56457066 | 56457247 | 56457066 | ID=Msa0412760-mRNA-1:five_prime_utr;Parent=Msa0412760-mRNA-1 |
| chr3_2 | five_prime_UTR | 56456677 | 56456807 | 56456677 | ID=Msa0412760-mRNA-1:five_prime_utr;Parent=Msa0412760-mRNA-1 |
| chr3_2 | CDS | 56455376 | 56456676 | 56455376 | ID=Msa0412760-mRNA-1:cds;Parent=Msa0412760-mRNA-1 |
| chr3_2 | CDS | 56453976 | 56454219 | 56453976 | ID=Msa0412760-mRNA-1:cds;Parent=Msa0412760-mRNA-1 |
| chr3_2 | three_prime_UTR | 56453655 | 56453975 | 56453655 | ID=Msa0412760-mRNA-1:three_prime_utr;Parent=Msa0412760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
