AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0685880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685880 MtrunA17_Chr4g0034441 98.884 448 5 0 1 448 1 448 0.0 927
Msa0685880 MtrunA17_Chr4g0034461 87.255 306 38 1 1 306 1 305 0.0 558
Msa0685880 MtrunA17_Chr4g0034471 91.176 136 12 0 313 448 1 136 2.27e-87 263
Msa0685880 MtrunA17_Chr1g0197471 77.536 138 31 0 112 249 92 229 1.13e-69 222
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685880 AT4G34350.1 77.342 459 88 3 5 448 8 465 0.0 746

Find 124 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGACTTTGAAGGAAAA+TGG 0.141165 4_4:+50141948 Msa0685880:CDS
ATTCTTGGTGGTGAATTTAA+TGG 0.163592 4_4:+50143138 Msa0685880:CDS
CATCATAGACCAATCTATTT+AGG 0.217939 4_4:+50144629 Msa0685880:three_prime_UTR
ATTTAAATTTGCCCTTTCTA+AGG 0.245365 4_4:+50143275 Msa0685880:CDS
AACGCGGAATTCCTTCTTAC+TGG 0.255913 4_4:+50143866 Msa0685880:CDS
TTGTATGCTATTCTGTTTCC+TGG 0.263735 4_4:-50143913 None:intergenic
AGATTCTTACGGAAGAGTTT+TGG 0.268289 4_4:-50140989 None:intergenic
CCACAACCCAACTGTTAATA+AGG 0.284593 4_4:+50142115 Msa0685880:CDS
CAGGATGAACTTGAAATTAC+AGG 0.305982 4_4:+50144497 Msa0685880:three_prime_UTR
TTATTAAATGTATAAATTAC+AGG 0.316839 4_4:+50144478 Msa0685880:three_prime_UTR
GATGTTACACCAATCCTTAA+TGG 0.325134 4_4:-50144098 None:intergenic
TTCTACCAAAGGGTCCATTA+AGG 0.329049 4_4:+50144084 Msa0685880:CDS
GTAGTCATACTGCCTGCTTT+TGG 0.349326 4_4:+50142673 Msa0685880:CDS
TTCATCAGGAAATTGTTTCC+TGG 0.355179 4_4:-50142066 None:intergenic
AGGACTATGATGCGTAAATA+TGG 0.365077 4_4:+50143495 Msa0685880:CDS
TATGTTTGCGACTATATTCT+TGG 0.365313 4_4:+50143123 Msa0685880:CDS
TCAAGGTGTTTGATTTGAAA+AGG 0.366046 4_4:+50144412 Msa0685880:CDS
CCTTGTGACCAAAGCCTTTG+CGG 0.366949 4_4:-50141033 None:intergenic
TGTTTCTTCCCTTCTCCAAT+TGG 0.369463 4_4:-50142625 None:intergenic
AATTATAACCGCAAAGGCTT+TGG 0.372584 4_4:+50141025 Msa0685880:CDS
AAATGCCTCTCTGGTTGAAC+TGG 0.377526 4_4:-50143163 None:intergenic
TCGAATGATAGTACCATTAC+TGG 0.397402 4_4:-50144707 None:intergenic
TTATGTTAGTTGTTGGTGGC+TGG 0.411202 4_4:+50143803 Msa0685880:CDS
GTTCCTCGGCTATCTCTTGT+AGG 0.412759 4_4:-50143846 None:intergenic
CAAGCTGGTGGAGAAAGATA+TGG 0.419899 4_4:+50143777 Msa0685880:CDS
TTAAGACTTTGAAGGAAAAT+GGG 0.420831 4_4:+50141949 Msa0685880:CDS
CAAGGTGTTTGATTTGAAAA+GGG 0.423274 4_4:+50144413 Msa0685880:CDS
TGGGTTGTGGATAATTTCAT+TGG 0.423611 4_4:-50142102 None:intergenic
CATTCGAATATAATGAAAAC+AGG 0.423645 4_4:+50144723 Msa0685880:three_prime_UTR
CCTTATTAACAGTTGGGTTG+TGG 0.426777 4_4:-50142115 None:intergenic
CGGAGAAGAGTTTGCGGCAG+CGG 0.442341 4_4:-50140937 None:intergenic
AATATACCTTATTAACAGTT+GGG 0.443511 4_4:-50142121 None:intergenic
GAATATACCTTATTAACAGT+TGG 0.443926 4_4:-50142122 None:intergenic
GACTATACCTCGATAATTCA+TGG 0.447725 4_4:+50142919 Msa0685880:CDS
CCAATCCTTAATGGACCCTT+TGG 0.452397 4_4:-50144089 None:intergenic
GTGATGCTAGCCGAATCCTT+TGG 0.452734 4_4:+50141999 Msa0685880:CDS
GCAAGAGAAAATACCTTGTC+AGG 0.454180 4_4:-50144134 None:intergenic
CACTTCTTGTGAGATTCTTA+CGG 0.455809 4_4:-50141000 None:intergenic
ATTGACAGCGAGCAAAGAAT+TGG 0.462963 4_4:+50143889 Msa0685880:CDS
TTCAAATTGCTTATGAAGCC+AGG 0.465315 4_4:+50142048 Msa0685880:CDS
CAGTTGCTACGGTTTCCTCA+TGG 0.466058 4_4:-50142951 None:intergenic
ATGGATGATCCTAAATAGAT+TGG 0.466225 4_4:-50144638 None:intergenic
CTCGCGATTCATGAGTTTGA+GGG 0.471780 4_4:-50141062 None:intergenic
GATCTTATGTTAGTTGTTGG+TGG 0.473078 4_4:+50143799 Msa0685880:CDS
TTTAAATTTGCCCTTTCTAA+GGG 0.475566 4_4:+50143276 Msa0685880:CDS
ATGGATCTTATGTTAGTTGT+TGG 0.478899 4_4:+50143796 Msa0685880:CDS
GAAGTGCAGAATATTCCAAT+TGG 0.482048 4_4:+50142610 Msa0685880:CDS
CACAATTTGTGATGCTACTC+AGG 0.482457 4_4:+50143554 Msa0685880:CDS
CCAACAAAATCCAAAGGATT+CGG 0.483780 4_4:-50142009 None:intergenic
TTAAGGATTGGTGTAACATC+TGG 0.487090 4_4:+50144101 Msa0685880:CDS
TGACATCATTAAGACTTTGA+AGG 0.488498 4_4:+50141941 Msa0685880:CDS
AACTTGCCCGTGGGTTTCAA+AGG 0.489241 4_4:+50142753 Msa0685880:CDS
AAAATGGGTTTGAGTATACA+TGG 0.492239 4_4:+50141964 Msa0685880:CDS
AGAAGGAATTCCGCGTTCCT+CGG 0.495852 4_4:-50143860 None:intergenic
CAGAATATTCCAATTGGAGA+AGG 0.503145 4_4:+50142616 Msa0685880:CDS
TCAACTGCGGCTCCAAAAGC+AGG 0.503912 4_4:-50142685 None:intergenic
GACAGTGACCTGGTAAAACT+TGG 0.507138 4_4:+50143309 Msa0685880:CDS
CTTTCAGCATGGTGAGCTTG+TGG 0.510724 4_4:+50144049 Msa0685880:intron
AAATAGAGAACACGAGTTTG+CGG 0.512910 4_4:+50140768 None:intergenic
AGCAAAAGATGCAGTTGCTA+CGG 0.513891 4_4:-50142962 None:intergenic
AAAGAAAACTTTCTACCAAA+GGG 0.517497 4_4:+50144074 Msa0685880:CDS
AGTTGCTACGGTTTCCTCAT+GGG 0.518159 4_4:-50142950 None:intergenic
AGAAGGGAAGAAACAATTTG+AGG 0.519363 4_4:+50142633 Msa0685880:CDS
TCATCCATGCATTTGTACTC+TGG 0.521867 4_4:+50144653 Msa0685880:three_prime_UTR
GATGCAGCGGCTAGAGGAGA+TGG 0.525080 4_4:+50142588 Msa0685880:intron
CCGCAAAGGCTTTGGTCACA+AGG 0.525512 4_4:+50141033 Msa0685880:CDS
CTGTCAGGACAGAGACAAAC+GGG 0.526766 4_4:-50140835 None:intergenic
TGTCCTGACAGTATCTTCAA+TGG 0.529422 4_4:+50140847 Msa0685880:exon
GAAAGAAAACTTTCTACCAA+AGG 0.530120 4_4:+50144073 Msa0685880:CDS
GGAACGTCGATACGAGTGGC+GGG 0.534181 4_4:-50140899 None:intergenic
CAGCGGAAAGTGGTCGGAGA+AGG 0.536733 4_4:-50140920 None:intergenic
CGTGGAAGATGCTCTTATCA+AGG 0.542913 4_4:+50144395 Msa0685880:CDS
ACTCGCGATTCATGAGTTTG+AGG 0.543010 4_4:-50141063 None:intergenic
CTGGATCAAAGCCCTTAGAA+AGG 0.544154 4_4:-50143287 None:intergenic
ATGTCTCTATTGACCAGTAA+TGG 0.544999 4_4:+50144694 Msa0685880:three_prime_UTR
AGAAAATACCTTGTCAGGTG+TGG 0.545193 4_4:-50144129 None:intergenic
TGGATCAAAGCCCTTAGAAA+GGG 0.549420 4_4:-50143286 None:intergenic
AATCGGAGTCGGCGGAGCAA+CGG 0.550136 4_4:-50140961 None:intergenic
CCAAAGGGTCCATTAAGGAT+TGG 0.551091 4_4:+50144089 Msa0685880:CDS
ACAATTTGAGGTTGTTAACA+AGG 0.556630 4_4:+50142645 Msa0685880:CDS
ATTCATTTAATATAACATTG+AGG 0.557891 4_4:-50144554 None:intergenic
GAGTTTGCGGCAGCGGAAAG+TGG 0.561477 4_4:-50140930 None:intergenic
AGCGAGCAAAGAATTGGTCC+AGG 0.563565 4_4:+50143895 Msa0685880:CDS
GAGCCATTGAAGATACTGTC+AGG 0.564228 4_4:-50140850 None:intergenic
ACTGTCAGGACAGAGACAAA+CGG 0.566093 4_4:-50140836 None:intergenic
AACGGACGGAGAAGAGTTTG+CGG 0.566321 4_4:-50140943 None:intergenic
CGTCGATACAACTTGCCCGT+GGG 0.568131 4_4:+50142744 Msa0685880:CDS
ACAAGATGCTATTTACAAGC+TGG 0.568463 4_4:+50143762 Msa0685880:CDS
AAATCAGACAACAATGCTCA+AGG 0.577136 4_4:+50143338 Msa0685880:CDS
ATGATTGATGCAGCGGCTAG+AGG 0.580973 4_4:+50142582 Msa0685880:intron
TCGCTGTCAATCCAGTAAGA+AGG 0.582364 4_4:-50143877 None:intergenic
AAATGGGTTTGAGTATACAT+GGG 0.586456 4_4:+50141965 Msa0685880:CDS
GTTTGCGACTATATTCTTGG+TGG 0.588117 4_4:+50143126 Msa0685880:CDS
TTGCGGCAGCGGAAAGTGGT+CGG 0.589689 4_4:-50140926 None:intergenic
ATAGATACCTTTGAAACCCA+CGG 0.589835 4_4:-50142760 None:intergenic
GCATTTGTACTCTGGCTGCA+AGG 0.598950 4_4:+50144661 Msa0685880:three_prime_UTR
CTTTGATCCAGACAGTGACC+TGG 0.605562 4_4:+50143299 Msa0685880:CDS
TGGTGCATCCACACCTGACA+AGG 0.608493 4_4:+50144121 Msa0685880:CDS
AGTGAGAATTATAACCGCAA+AGG 0.609945 4_4:+50141019 Msa0685880:CDS
CAAGAGATAGCCGAGGAACG+CGG 0.611703 4_4:+50143850 Msa0685880:CDS
GGAGTCGGCGGAGCAACGGA+CGG 0.613935 4_4:-50140957 None:intergenic
AGATGCTATTTACAAGCTGG+TGG 0.615477 4_4:+50143765 Msa0685880:CDS
CAATTTGAGGTTGTTAACAA+GGG 0.615513 4_4:+50142646 Msa0685880:CDS
TACGAGTGGCGGGGAGACGT+AGG 0.619291 4_4:-50140889 None:intergenic
TGGGTCAAAATCGGAGTCGG+CGG 0.619991 4_4:-50140969 None:intergenic
AATCAGACAACAATGCTCAA+GGG 0.621380 4_4:+50143339 Msa0685880:CDS
AGAATATTCCAATTGGAGAA+GGG 0.622085 4_4:+50142617 Msa0685880:CDS
TAGATACCTTTGAAACCCAC+GGG 0.624793 4_4:-50142759 None:intergenic
AAGGGAGAGACTGAAGAGAT+CGG 0.626047 4_4:+50143357 Msa0685880:CDS
TCGTCGATACAACTTGCCCG+TGG 0.631858 4_4:+50142743 Msa0685880:CDS
GCAGCCAGAGTACAAATGCA+TGG 0.635339 4_4:-50144657 None:intergenic
TATGATGCGTAAATATGGCG+TGG 0.636939 4_4:+50143500 Msa0685880:CDS
ATATTTACCATGAATTATCG+AGG 0.639141 4_4:-50142926 None:intergenic
GAACGTCGATACGAGTGGCG+GGG 0.640638 4_4:-50140898 None:intergenic
TTATAGGCAGACTAGTGGAG+AGG 0.648372 4_4:+50143475 Msa0685880:intron
TAGATTGGTCTATGATGACA+AGG 0.652639 4_4:-50144623 None:intergenic
CATTACAACTCGTGTAACGT+AGG 0.654962 4_4:+50144442 Msa0685880:exon
AGAAGGAACGTCGATACGAG+TGG 0.655672 4_4:-50140903 None:intergenic
TCATGGTAAATATGCCCATG+AGG 0.657612 4_4:+50142936 Msa0685880:CDS
AGGAACGTCGATACGAGTGG+CGG 0.665289 4_4:-50140900 None:intergenic
AATGGGTTTGAGTATACATG+GGG 0.674771 4_4:+50141966 Msa0685880:CDS
TGGATCCAGTTCAACCAGAG+AGG 0.678385 4_4:+50143158 Msa0685880:CDS
GGTCAACATCTCGTCAACTG+CGG 0.691748 4_4:-50142698 None:intergenic
ACACCTACAAGAGATAGCCG+AGG 0.737129 4_4:+50143843 Msa0685880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTAAAATAAATA+TGG + chr4_4:50142354-50142373 Msa0685880:intron 10.0%
!! AAAAGATGTAAAATAAATAT+GGG + chr4_4:50142355-50142374 Msa0685880:intron 10.0%
!! GAAATTTAAATAAACTATAT+GGG - chr4_4:50144285-50144304 None:intergenic 10.0%
!! TGAAATTTAAATAAACTATA+TGG - chr4_4:50144286-50144305 None:intergenic 10.0%
!! TTATTAAATGTATAAATTAC+AGG + chr4_4:50144478-50144497 Msa0685880:three_prime_UTR 10.0%
!! TAAAATAAATATGGGTATAT+TGG + chr4_4:50142363-50142382 Msa0685880:intron 15.0%
!! ATACATAATTGTGAAAAATA+TGG + chr4_4:50142990-50143009 Msa0685880:CDS 15.0%
!!! CAACTTTTTTATTAGAATAA+TGG - chr4_4:50143719-50143738 None:intergenic 15.0%
!! ATTCATTTAATATAACATTG+AGG - chr4_4:50144557-50144576 None:intergenic 15.0%
!! ATGTTGAATTTCTTTAGATA+TGG + chr4_4:50141507-50141526 Msa0685880:intron 20.0%
!!! AAGTCTTATTCAAATAAAGT+TGG - chr4_4:50141754-50141773 None:intergenic 20.0%
!! AATTTCCTGATGAAAAAATT+TGG + chr4_4:50142075-50142094 Msa0685880:CDS 20.0%
!! AATATACCTTATTAACAGTT+GGG - chr4_4:50142124-50142143 None:intergenic 20.0%
!! ACTTAACAATTGAAAAATTC+AGG - chr4_4:50142169-50142188 None:intergenic 20.0%
!!! TATGTTGTTGATCATTTTAT+AGG + chr4_4:50143459-50143478 Msa0685880:intron 20.0%
!!! TGTGAATCTATAAAAACTTT+TGG + chr4_4:50144163-50144182 Msa0685880:intron 20.0%
!! AGCATTAAAAAAACTTAGAT+TGG - chr4_4:50144346-50144365 None:intergenic 20.0%
!!! TTTGTTGTTCAATTGATTTG+TGG + chr4_4:50141442-50141461 Msa0685880:intron 25.0%
!! TGACTTATTTGAGTTTATTG+TGG - chr4_4:50141628-50141647 None:intergenic 25.0%
!! CTATATTCCCATAAGTTTTT+CGG + chr4_4:50141692-50141711 Msa0685880:intron 25.0%
! AATCTATCCGAAAAACTTAT+GGG - chr4_4:50141702-50141721 None:intergenic 25.0%
! TAATCTATCCGAAAAACTTA+TGG - chr4_4:50141703-50141722 None:intergenic 25.0%
!! ATTAAGACTTTGAAGGAAAA+TGG + chr4_4:50141948-50141967 Msa0685880:CDS 25.0%
!! TTAAGACTTTGAAGGAAAAT+GGG + chr4_4:50141949-50141968 Msa0685880:CDS 25.0%
!!! GTAATCCAAATTTTTTCATC+AGG - chr4_4:50142083-50142102 None:intergenic 25.0%
! GAATATACCTTATTAACAGT+TGG - chr4_4:50142125-50142144 None:intergenic 25.0%
! TGAAAAATTCAGGAAATTGA+AGG - chr4_4:50142159-50142178 None:intergenic 25.0%
!! TAATGTAGTGGAAAATTCAA+AGG + chr4_4:50142398-50142417 Msa0685880:intron 25.0%
!! AATGTAGTGGAAAATTCAAA+GGG + chr4_4:50142399-50142418 Msa0685880:intron 25.0%
! CAATTGATCATGTAAAAAGA+CGG - chr4_4:50142544-50142563 None:intergenic 25.0%
!!! TTCTTCGATGAATTGTTTTA+AGG + chr4_4:50142864-50142883 Msa0685880:intron 25.0%
! ATATTTACCATGAATTATCG+AGG - chr4_4:50142929-50142948 None:intergenic 25.0%
!! ACAACAATATCTTCAAGTTA+AGG - chr4_4:50143068-50143087 None:intergenic 25.0%
! CAAATAATCACAACATTGAA+GGG - chr4_4:50143238-50143257 None:intergenic 25.0%
! TCAAATAATCACAACATTGA+AGG - chr4_4:50143239-50143258 None:intergenic 25.0%
! ATTTAAATTTGCCCTTTCTA+AGG + chr4_4:50143275-50143294 Msa0685880:CDS 25.0%
! TTTAAATTTGCCCTTTCTAA+GGG + chr4_4:50143276-50143295 Msa0685880:CDS 25.0%
! AAAGAAAACTTTCTACCAAA+GGG + chr4_4:50144074-50144093 Msa0685880:CDS 25.0%
!! TTTTTATAGATTCACAAGCA+AGG - chr4_4:50144159-50144178 None:intergenic 25.0%
! TTACAAAAAACTAACAAGAG+TGG - chr4_4:50144193-50144212 None:intergenic 25.0%
! TATTATCAGCAAAAACTGAA+TGG - chr4_4:50144322-50144341 None:intergenic 25.0%
!!! TAATGCTTATTTTGCATCAT+TGG + chr4_4:50144359-50144378 Msa0685880:intron 25.0%
! CATTCGAATATAATGAAAAC+AGG + chr4_4:50144723-50144742 Msa0685880:three_prime_UTR 25.0%
!!! TTAGCGAAATTGTTTTGACT+TGG - chr4_4:50141126-50141145 None:intergenic 30.0%
TCGCTAATTGAGTTTATCTT+TGG + chr4_4:50141139-50141158 Msa0685880:intron 30.0%
! ACACACTTTATGATGGAAAA+TGG - chr4_4:50141213-50141232 None:intergenic 30.0%
GAAAGTAACACACTTTATGA+TGG - chr4_4:50141220-50141239 None:intergenic 30.0%
!! AAAGTGTGTTACTTTCTAGA+TGG + chr4_4:50141224-50141243 Msa0685880:intron 30.0%
!! AAGTGTGTTACTTTCTAGAT+GGG + chr4_4:50141225-50141244 Msa0685880:intron 30.0%
AATAAGTGCTTCATAGAGTT+TGG + chr4_4:50141388-50141407 Msa0685880:intron 30.0%
ACATACGATGAGAAATTTGA+TGG + chr4_4:50141412-50141431 Msa0685880:intron 30.0%
! GCTTATTTGAGTTTATCTAG+TGG + chr4_4:50141576-50141595 Msa0685880:intron 30.0%
AAATAAGTCAATCCAAACAG+AGG + chr4_4:50141638-50141657 Msa0685880:intron 30.0%
! CTTCTGCTAACCTTTTTATT+GGG - chr4_4:50141672-50141691 None:intergenic 30.0%
TCATATAAGTGCTTCTGTAT+AGG - chr4_4:50141803-50141822 None:intergenic 30.0%
ATGCTAAACAAGCTTAATTG+AGG + chr4_4:50141832-50141851 Msa0685880:intron 30.0%
TAATGAACTAAGGTCTTCTT+TGG - chr4_4:50141865-50141884 None:intergenic 30.0%
TGACATCATTAAGACTTTGA+AGG + chr4_4:50141941-50141960 Msa0685880:CDS 30.0%
! AAAATGGGTTTGAGTATACA+TGG + chr4_4:50141964-50141983 Msa0685880:CDS 30.0%
! AAATGGGTTTGAGTATACAT+GGG + chr4_4:50141965-50141984 Msa0685880:CDS 30.0%
ATAAGTTTATCCATCAAGAG+AGG + chr4_4:50142287-50142306 Msa0685880:intron 30.0%
TAAGTTTATCCATCAAGAGA+GGG + chr4_4:50142288-50142307 Msa0685880:intron 30.0%
AAATATGGGTATATTGGTAG+AGG + chr4_4:50142369-50142388 Msa0685880:intron 30.0%
TAGAGGAACAATTAATGTAG+TGG + chr4_4:50142386-50142405 Msa0685880:intron 30.0%
! ATGTAGTGGAAAATTCAAAG+GGG + chr4_4:50142400-50142419 Msa0685880:intron 30.0%
TCAAAGGGGATCTTATAAAA+AGG + chr4_4:50142414-50142433 Msa0685880:intron 30.0%
CAAAGGGGATCTTATAAAAA+GGG + chr4_4:50142415-50142434 Msa0685880:intron 30.0%
! ACAGAGAAATTTTCTCAAGA+AGG + chr4_4:50142438-50142457 Msa0685880:intron 30.0%
TCAAGAAGGTCTTACATTTA+GGG + chr4_4:50142452-50142471 Msa0685880:intron 30.0%
AGAATATTCCAATTGGAGAA+GGG + chr4_4:50142617-50142636 Msa0685880:CDS 30.0%
! ACAATTTGAGGTTGTTAACA+AGG + chr4_4:50142645-50142664 Msa0685880:CDS 30.0%
! CAATTTGAGGTTGTTAACAA+GGG + chr4_4:50142646-50142665 Msa0685880:CDS 30.0%
! TTGAACATTTTTCTCACTCA+AGG - chr4_4:50142722-50142741 None:intergenic 30.0%
!!! CGATGAATTGTTTTAAGGTA+TGG + chr4_4:50142869-50142888 Msa0685880:intron 30.0%
AATTGTGAAAAATATGGCAG+AGG + chr4_4:50142996-50143015 Msa0685880:CDS 30.0%
GCATAATTGAAAATTCATCC+AGG + chr4_4:50143095-50143114 Msa0685880:intron 30.0%
TATGTTTGCGACTATATTCT+TGG + chr4_4:50143123-50143142 Msa0685880:CDS 30.0%
!! ATTCTTGGTGGTGAATTTAA+TGG + chr4_4:50143138-50143157 Msa0685880:CDS 30.0%
!!! ATTTTTTTGCTGTGGAGTTA+AGG + chr4_4:50143384-50143403 Msa0685880:intron 30.0%
!!! TTTTTTTGCTGTGGAGTTAA+GGG + chr4_4:50143385-50143404 Msa0685880:intron 30.0%
CCAAATAAGCAATAACATCA+GGG - chr4_4:50143598-50143617 None:intergenic 30.0%
CCTGATGTTATTGCTTATTT+GGG + chr4_4:50143596-50143615 Msa0685880:intron 30.0%
! AATATGTTTTTCTGTCGCAA+TGG + chr4_4:50143681-50143700 Msa0685880:intron 30.0%
TAGAATAATGGCATACAGAA+TGG - chr4_4:50143707-50143726 None:intergenic 30.0%
GTTGAATTGAATTTCCTTTC+AGG + chr4_4:50143735-50143754 Msa0685880:intron 30.0%
ATGGATCTTATGTTAGTTGT+TGG + chr4_4:50143796-50143815 Msa0685880:CDS 30.0%
ATGTTTACTGTATCAGATCT+TGG - chr4_4:50143974-50143993 None:intergenic 30.0%
! TATCTTTTCATCTTTCAGCA+TGG + chr4_4:50144038-50144057 Msa0685880:intron 30.0%
GAAAGAAAACTTTCTACCAA+AGG + chr4_4:50144073-50144092 Msa0685880:CDS 30.0%
AAAAAACTAACAAGAGTGGA+AGG - chr4_4:50144189-50144208 None:intergenic 30.0%
!! TCAAGGTGTTTGATTTGAAA+AGG + chr4_4:50144412-50144431 Msa0685880:CDS 30.0%
!! CAAGGTGTTTGATTTGAAAA+GGG + chr4_4:50144413-50144432 Msa0685880:CDS 30.0%
!!! CTTCTAAATGTTGCTTTTTG+TGG + chr4_4:50144578-50144597 Msa0685880:three_prime_UTR 30.0%
CATCATAGACCAATCTATTT+AGG + chr4_4:50144629-50144648 Msa0685880:three_prime_UTR 30.0%
ATGGATGATCCTAAATAGAT+TGG - chr4_4:50144641-50144660 None:intergenic 30.0%
!!! GAAGAGTTTTGGGTCAAAAT+CGG - chr4_4:50140981-50141000 None:intergenic 35.0%
! GATTCTTACGGAAGAGTTTT+GGG - chr4_4:50140991-50141010 None:intergenic 35.0%
! AGATTCTTACGGAAGAGTTT+TGG - chr4_4:50140992-50141011 None:intergenic 35.0%
CACTTCTTGTGAGATTCTTA+CGG - chr4_4:50141003-50141022 None:intergenic 35.0%
AGTGAGAATTATAACCGCAA+AGG + chr4_4:50141019-50141038 Msa0685880:CDS 35.0%
AATTATAACCGCAAAGGCTT+TGG + chr4_4:50141025-50141044 Msa0685880:CDS 35.0%
!! GTTCAATTGATTTGTGGAGA+TGG + chr4_4:50141448-50141467 Msa0685880:intron 35.0%
! TGAGATTTTATGCCTCTGTT+TGG + chr4_4:50141549-50141568 Msa0685880:intron 35.0%
! TTTTATGCCTCTGTTTGGAT+TGG + chr4_4:50141554-50141573 Msa0685880:intron 35.0%
AAATAAGCCAATCCAAACAG+AGG - chr4_4:50141564-50141583 None:intergenic 35.0%
! GCTTCTGCTAACCTTTTTAT+TGG - chr4_4:50141673-50141692 None:intergenic 35.0%
CACACACTCATAATGAACTA+AGG - chr4_4:50141875-50141894 None:intergenic 35.0%
!! TGTGCACTTTTTGTGATTTC+AGG + chr4_4:50141918-50141937 Msa0685880:intron 35.0%
! AATGGGTTTGAGTATACATG+GGG + chr4_4:50141966-50141985 Msa0685880:CDS 35.0%
CCAACAAAATCCAAAGGATT+CGG - chr4_4:50142012-50142031 None:intergenic 35.0%
! CGAATCCTTTGGATTTTGTT+GGG + chr4_4:50142010-50142029 Msa0685880:CDS 35.0%
! GAATCCTTTGGATTTTGTTG+GGG + chr4_4:50142011-50142030 Msa0685880:CDS 35.0%
! AATCCTTTGGATTTTGTTGG+GGG + chr4_4:50142012-50142031 Msa0685880:CDS 35.0%
TTCAAATTGCTTATGAAGCC+AGG + chr4_4:50142048-50142067 Msa0685880:CDS 35.0%
TTCATCAGGAAATTGTTTCC+TGG - chr4_4:50142069-50142088 None:intergenic 35.0%
TGGGTTGTGGATAATTTCAT+TGG - chr4_4:50142105-50142124 None:intergenic 35.0%
TATACTCCGTCCCTAAATAT+AGG + chr4_4:50142189-50142208 Msa0685880:intron 35.0%
CTAAGAGGGTCCTATATTTA+GGG - chr4_4:50142202-50142221 None:intergenic 35.0%
ACTAAGAGGGTCCTATATTT+AGG - chr4_4:50142203-50142222 None:intergenic 35.0%
TTCCCATGATTTGACTAAGA+GGG - chr4_4:50142216-50142235 None:intergenic 35.0%
ATTCCCATGATTTGACTAAG+AGG - chr4_4:50142217-50142236 None:intergenic 35.0%
AAATTAACTCCCTCTCTTGA+TGG - chr4_4:50142300-50142319 None:intergenic 35.0%
CTCAAGAAGGTCTTACATTT+AGG + chr4_4:50142451-50142470 Msa0685880:intron 35.0%
TCATGTAAAAAGACGGTATG+TGG - chr4_4:50142537-50142556 None:intergenic 35.0%
GAAGTGCAGAATATTCCAAT+TGG + chr4_4:50142610-50142629 Msa0685880:CDS 35.0%
CAGAATATTCCAATTGGAGA+AGG + chr4_4:50142616-50142635 Msa0685880:CDS 35.0%
AGAAGGGAAGAAACAATTTG+AGG + chr4_4:50142633-50142652 Msa0685880:CDS 35.0%
!! ATAGATACCTTTGAAACCCA+CGG - chr4_4:50142763-50142782 None:intergenic 35.0%
! GTTGTCGAAAAGCACAAAAA+AGG + chr4_4:50142895-50142914 Msa0685880:CDS 35.0%
GACTATACCTCGATAATTCA+TGG + chr4_4:50142919-50142938 Msa0685880:CDS 35.0%
TTGTTCTTAGTTGCTGATAG+TGG + chr4_4:50143020-50143039 Msa0685880:intron 35.0%
AAATCAGACAACAATGCTCA+AGG + chr4_4:50143338-50143357 Msa0685880:CDS 35.0%
AATCAGACAACAATGCTCAA+GGG + chr4_4:50143339-50143358 Msa0685880:CDS 35.0%
!!! TCGGTTAGATTTTTTTGCTG+TGG + chr4_4:50143376-50143395 Msa0685880:intron 35.0%
! TCATTTTATAGGCAGACTAG+TGG + chr4_4:50143470-50143489 Msa0685880:intron 35.0%
AGGACTATGATGCGTAAATA+TGG + chr4_4:50143495-50143514 Msa0685880:CDS 35.0%
CCCTGATGTTATTGCTTATT+TGG + chr4_4:50143595-50143614 Msa0685880:intron 35.0%
CCCAAATAAGCAATAACATC+AGG - chr4_4:50143599-50143618 None:intergenic 35.0%
! ACAAGATGCTATTTACAAGC+TGG + chr4_4:50143762-50143781 Msa0685880:CDS 35.0%
GATCTTATGTTAGTTGTTGG+TGG + chr4_4:50143799-50143818 Msa0685880:CDS 35.0%
TTGTATGCTATTCTGTTTCC+TGG - chr4_4:50143916-50143935 None:intergenic 35.0%
GATGTTACACCAATCCTTAA+TGG - chr4_4:50144101-50144120 None:intergenic 35.0%
! TTAAGGATTGGTGTAACATC+TGG + chr4_4:50144101-50144120 Msa0685880:CDS 35.0%
! CTGCTTGTGAAATATGCTTT+TGG + chr4_4:50144230-50144249 Msa0685880:intron 35.0%
CAGGATGAACTTGAAATTAC+AGG + chr4_4:50144497-50144516 Msa0685880:three_prime_UTR 35.0%
!! TAGATTGGTCTATGATGACA+AGG - chr4_4:50144626-50144645 None:intergenic 35.0%
ATGTCTCTATTGACCAGTAA+TGG + chr4_4:50144694-50144713 Msa0685880:three_prime_UTR 35.0%
TCGAATGATAGTACCATTAC+TGG - chr4_4:50144710-50144729 None:intergenic 35.0%
TGTCCTGACAGTATCTTCAA+TGG + chr4_4:50140847-50140866 Msa0685880:exon 40.0%
!! TTTTGGGTCAAAATCGGAGT+CGG - chr4_4:50140975-50140994 None:intergenic 40.0%
TACATGCATCAGTGTCATGT+TGG - chr4_4:50141305-50141324 None:intergenic 40.0%
GGCGTAAAGTCCCAATAAAA+AGG + chr4_4:50141659-50141678 Msa0685880:intron 40.0%
! CCGAATCCTTTGGATTTTGT+TGG + chr4_4:50142009-50142028 Msa0685880:CDS 40.0%
! ATCCTTTGGATTTTGTTGGG+GGG + chr4_4:50142013-50142032 Msa0685880:CDS 40.0%
! CCTTATTAACAGTTGGGTTG+TGG - chr4_4:50142118-50142137 None:intergenic 40.0%
CCACAACCCAACTGTTAATA+AGG + chr4_4:50142115-50142134 Msa0685880:CDS 40.0%
TTCAGGAAATTGAAGGCGAT+AGG - chr4_4:50142152-50142171 None:intergenic 40.0%
GACCCTCTTAGTCAAATCAT+GGG + chr4_4:50142211-50142230 Msa0685880:intron 40.0%
ACGGTATGTGGAAGAAAACA+AGG - chr4_4:50142525-50142544 None:intergenic 40.0%
TGTTTCTTCCCTTCTCCAAT+TGG - chr4_4:50142628-50142647 None:intergenic 40.0%
!! TAGATACCTTTGAAACCCAC+GGG - chr4_4:50142762-50142781 None:intergenic 40.0%
TCATGGTAAATATGCCCATG+AGG + chr4_4:50142936-50142955 Msa0685880:CDS 40.0%
AGCAAAAGATGCAGTTGCTA+CGG - chr4_4:50142965-50142984 None:intergenic 40.0%
GTTTGCGACTATATTCTTGG+TGG + chr4_4:50143126-50143145 Msa0685880:CDS 40.0%
AGCAAGATCAACTACAAGAC+AGG - chr4_4:50143208-50143227 None:intergenic 40.0%
TGGATCAAAGCCCTTAGAAA+GGG - chr4_4:50143289-50143308 None:intergenic 40.0%
! TTGCAATGCCAAGTTTTACC+AGG - chr4_4:50143320-50143339 None:intergenic 40.0%
TATGATGCGTAAATATGGCG+TGG + chr4_4:50143500-50143519 Msa0685880:CDS 40.0%
CACAATTTGTGATGCTACTC+AGG + chr4_4:50143554-50143573 Msa0685880:CDS 40.0%
! AGATGCTATTTACAAGCTGG+TGG + chr4_4:50143765-50143784 Msa0685880:CDS 40.0%
!! TTATGTTAGTTGTTGGTGGC+TGG + chr4_4:50143803-50143822 Msa0685880:CDS 40.0%
ATTGACAGCGAGCAAAGAAT+TGG + chr4_4:50143889-50143908 Msa0685880:CDS 40.0%
TTCTACCAAAGGGTCCATTA+AGG + chr4_4:50144084-50144103 Msa0685880:CDS 40.0%
AGAAAATACCTTGTCAGGTG+TGG - chr4_4:50144132-50144151 None:intergenic 40.0%
GCAAGAGAAAATACCTTGTC+AGG - chr4_4:50144137-50144156 None:intergenic 40.0%
TGCATCATTGGATTTCACAC+AGG + chr4_4:50144371-50144390 Msa0685880:intron 40.0%
CATTACAACTCGTGTAACGT+AGG + chr4_4:50144442-50144461 Msa0685880:exon 40.0%
TCATCCATGCATTTGTACTC+TGG + chr4_4:50144653-50144672 Msa0685880:three_prime_UTR 40.0%
ACTGTCAGGACAGAGACAAA+CGG - chr4_4:50140839-50140858 None:intergenic 45.0%
GAGCCATTGAAGATACTGTC+AGG - chr4_4:50140853-50140872 None:intergenic 45.0%
CTCGCGATTCATGAGTTTGA+GGG - chr4_4:50141065-50141084 None:intergenic 45.0%
ACTCGCGATTCATGAGTTTG+AGG - chr4_4:50141066-50141085 None:intergenic 45.0%
CATCAGTGTCATGTTGGTGT+CGG - chr4_4:50141299-50141318 None:intergenic 45.0%
AACCCCCCAACAAAATCCAA+AGG - chr4_4:50142018-50142037 None:intergenic 45.0%
! ATTTTGTTGGGGGGTTGAGA+GGG + chr4_4:50142022-50142041 Msa0685880:CDS 45.0%
GAGGGTCCTATATTTAGGGA+CGG - chr4_4:50142198-50142217 None:intergenic 45.0%
GGACCCTCTTAGTCAAATCA+TGG + chr4_4:50142210-50142229 Msa0685880:intron 45.0%
GGTCTTACATTTAGGGACAG+AGG + chr4_4:50142459-50142478 Msa0685880:intron 45.0%
TGTGGAAGAAAACAAGGCAC+TGG - chr4_4:50142519-50142538 None:intergenic 45.0%
! GTGCTTGATGATTGATGCAG+CGG + chr4_4:50142575-50142594 Msa0685880:intron 45.0%
! GTAGTCATACTGCCTGCTTT+TGG + chr4_4:50142673-50142692 Msa0685880:CDS 45.0%
AGTTGCTACGGTTTCCTCAT+GGG - chr4_4:50142953-50142972 None:intergenic 45.0%
! GTAGCAACTGCATCTTTTGC+TGG + chr4_4:50142964-50142983 Msa0685880:CDS 45.0%
AGTCGCAAACATATTCAGCC+TGG - chr4_4:50143116-50143135 None:intergenic 45.0%
AAATGCCTCTCTGGTTGAAC+TGG - chr4_4:50143166-50143185 None:intergenic 45.0%
!!! AACCAGAGAGGCATTTTTCG+AGG + chr4_4:50143170-50143189 Msa0685880:CDS 45.0%
AACCTCGAAAAATGCCTCTC+TGG - chr4_4:50143175-50143194 None:intergenic 45.0%
CTGGATCAAAGCCCTTAGAA+AGG - chr4_4:50143290-50143309 None:intergenic 45.0%
! AGTTTTACCAGGTCACTGTC+TGG - chr4_4:50143309-50143328 None:intergenic 45.0%
GACAGTGACCTGGTAAAACT+TGG + chr4_4:50143309-50143328 Msa0685880:CDS 45.0%
AAGGGAGAGACTGAAGAGAT+CGG + chr4_4:50143357-50143376 Msa0685880:CDS 45.0%
TTATAGGCAGACTAGTGGAG+AGG + chr4_4:50143475-50143494 Msa0685880:intron 45.0%
CAAGCTGGTGGAGAAAGATA+TGG + chr4_4:50143777-50143796 Msa0685880:CDS 45.0%
AACGCGGAATTCCTTCTTAC+TGG + chr4_4:50143866-50143885 Msa0685880:CDS 45.0%
TCGCTGTCAATCCAGTAAGA+AGG - chr4_4:50143880-50143899 None:intergenic 45.0%
! CCAATCCTTAATGGACCCTT+TGG - chr4_4:50144092-50144111 None:intergenic 45.0%
CCAAAGGGTCCATTAAGGAT+TGG + chr4_4:50144089-50144108 Msa0685880:CDS 45.0%
ATTGGATTTCACACAGGTCG+TGG + chr4_4:50144377-50144396 Msa0685880:intron 45.0%
CGTGGAAGATGCTCTTATCA+AGG + chr4_4:50144395-50144414 Msa0685880:CDS 45.0%
CTGTCAGGACAGAGACAAAC+GGG - chr4_4:50140838-50140857 None:intergenic 50.0%
AGAAGGAACGTCGATACGAG+TGG - chr4_4:50140906-50140925 None:intergenic 50.0%
AACGGACGGAGAAGAGTTTG+CGG - chr4_4:50140946-50140965 None:intergenic 50.0%
CCTTGTGACCAAAGCCTTTG+CGG - chr4_4:50141036-50141055 None:intergenic 50.0%
TGGGACTTTACGCCTCTGTT+TGG - chr4_4:50141653-50141672 None:intergenic 50.0%
GTGATGCTAGCCGAATCCTT+TGG + chr4_4:50141999-50142018 Msa0685880:CDS 50.0%
! GATTTTGTTGGGGGGTTGAG+AGG + chr4_4:50142021-50142040 Msa0685880:CDS 50.0%
!! GGAAGAAAACAAGGCACTGG+CGG - chr4_4:50142516-50142535 None:intergenic 50.0%
ATGATTGATGCAGCGGCTAG+AGG + chr4_4:50142582-50142601 Msa0685880:intron 50.0%
GGTCAACATCTCGTCAACTG+CGG - chr4_4:50142701-50142720 None:intergenic 50.0%
AACTTGCCCGTGGGTTTCAA+AGG + chr4_4:50142753-50142772 Msa0685880:CDS 50.0%
CAGTTGCTACGGTTTCCTCA+TGG - chr4_4:50142954-50142973 None:intergenic 50.0%
TGGATCCAGTTCAACCAGAG+AGG + chr4_4:50143158-50143177 Msa0685880:CDS 50.0%
CTTTGATCCAGACAGTGACC+TGG + chr4_4:50143299-50143318 Msa0685880:CDS 50.0%
AGCATCTTGTCGCTCCTGAA+AGG - chr4_4:50143752-50143771 None:intergenic 50.0%
ACACCTACAAGAGATAGCCG+AGG + chr4_4:50143843-50143862 Msa0685880:CDS 50.0%
GTTCCTCGGCTATCTCTTGT+AGG - chr4_4:50143849-50143868 None:intergenic 50.0%
AGAAGGAATTCCGCGTTCCT+CGG - chr4_4:50143863-50143882 None:intergenic 50.0%
AGCGAGCAAAGAATTGGTCC+AGG + chr4_4:50143895-50143914 Msa0685880:CDS 50.0%
CTTTCAGCATGGTGAGCTTG+TGG + chr4_4:50144049-50144068 Msa0685880:intron 50.0%
GCAGCCAGAGTACAAATGCA+TGG - chr4_4:50144660-50144679 None:intergenic 50.0%
GCATTTGTACTCTGGCTGCA+AGG + chr4_4:50144661-50144680 Msa0685880:three_prime_UTR 50.0%
AGGAACGTCGATACGAGTGG+CGG - chr4_4:50140903-50140922 None:intergenic 55.0%
TGGGTCAAAATCGGAGTCGG+CGG - chr4_4:50140972-50140991 None:intergenic 55.0%
! CCGCAAAGGCTTTGGTCACA+AGG + chr4_4:50141033-50141052 Msa0685880:CDS 55.0%
TCAACTGCGGCTCCAAAAGC+AGG - chr4_4:50142688-50142707 None:intergenic 55.0%
TCGTCGATACAACTTGCCCG+TGG + chr4_4:50142743-50142762 Msa0685880:CDS 55.0%
CGTCGATACAACTTGCCCGT+GGG + chr4_4:50142744-50142763 Msa0685880:CDS 55.0%
CAAGAGATAGCCGAGGAACG+CGG + chr4_4:50143850-50143869 Msa0685880:CDS 55.0%
TGGTGCATCCACACCTGACA+AGG + chr4_4:50144121-50144140 Msa0685880:CDS 55.0%
GAACGTCGATACGAGTGGCG+GGG - chr4_4:50140901-50140920 None:intergenic 60.0%
GGAACGTCGATACGAGTGGC+GGG - chr4_4:50140902-50140921 None:intergenic 60.0%
CAGCGGAAAGTGGTCGGAGA+AGG - chr4_4:50140923-50140942 None:intergenic 60.0%
TTGCGGCAGCGGAAAGTGGT+CGG - chr4_4:50140929-50140948 None:intergenic 60.0%
GAGTTTGCGGCAGCGGAAAG+TGG - chr4_4:50140933-50140952 None:intergenic 60.0%
CGGAGAAGAGTTTGCGGCAG+CGG - chr4_4:50140940-50140959 None:intergenic 60.0%
AATCGGAGTCGGCGGAGCAA+CGG - chr4_4:50140964-50140983 None:intergenic 60.0%
GATGCAGCGGCTAGAGGAGA+TGG + chr4_4:50142588-50142607 Msa0685880:intron 60.0%
! TACGAGTGGCGGGGAGACGT+AGG - chr4_4:50140892-50140911 None:intergenic 65.0%
GGAGTCGGCGGAGCAACGGA+CGG - chr4_4:50140960-50140979 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 50140769 50144761 50140769 ID=Msa0685880;Name=Msa0685880
chr4_4 mRNA 50140769 50144761 50140769 ID=Msa0685880-mRNA-1;Parent=Msa0685880;Name=Msa0685880-mRNA-1;_AED=0.12;_eAED=0.12;_QI=97|1|1|1|1|1|10|303|449
chr4_4 exon 50140769 50141091 50140769 ID=Msa0685880-mRNA-1:exon:12733;Parent=Msa0685880-mRNA-1
chr4_4 exon 50141940 50142136 50141940 ID=Msa0685880-mRNA-1:exon:12734;Parent=Msa0685880-mRNA-1
chr4_4 exon 50142595 50142774 50142595 ID=Msa0685880-mRNA-1:exon:12735;Parent=Msa0685880-mRNA-1
chr4_4 exon 50142886 50143017 50142886 ID=Msa0685880-mRNA-1:exon:12736;Parent=Msa0685880-mRNA-1
chr4_4 exon 50143117 50143191 50143117 ID=Msa0685880-mRNA-1:exon:12737;Parent=Msa0685880-mRNA-1
chr4_4 exon 50143273 50143378 50143273 ID=Msa0685880-mRNA-1:exon:12738;Parent=Msa0685880-mRNA-1
chr4_4 exon 50143481 50143575 50143481 ID=Msa0685880-mRNA-1:exon:12739;Parent=Msa0685880-mRNA-1
chr4_4 exon 50143757 50143942 50143757 ID=Msa0685880-mRNA-1:exon:12740;Parent=Msa0685880-mRNA-1
chr4_4 exon 50144056 50144142 50144056 ID=Msa0685880-mRNA-1:exon:12741;Parent=Msa0685880-mRNA-1
chr4_4 exon 50144393 50144761 50144393 ID=Msa0685880-mRNA-1:exon:12742;Parent=Msa0685880-mRNA-1
chr4_4 five_prime_UTR 50140769 50140865 50140769 ID=Msa0685880-mRNA-1:five_prime_utr;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50140866 50141091 50140866 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50141940 50142136 50141940 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50142595 50142774 50142595 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50142886 50143017 50142886 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50143117 50143191 50143117 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50143273 50143378 50143273 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50143481 50143575 50143481 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50143757 50143942 50143757 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50144056 50144142 50144056 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 CDS 50144393 50144458 50144393 ID=Msa0685880-mRNA-1:cds;Parent=Msa0685880-mRNA-1
chr4_4 three_prime_UTR 50144459 50144761 50144459 ID=Msa0685880-mRNA-1:three_prime_utr;Parent=Msa0685880-mRNA-1
Gene Sequence

>Msa0685880

ATGGCTCTCTGTTCGAATCTTTGCCTACGTCTCCCCGCCACTCGTATCGACGTTCCTTCTCCGACCACTTTCCGCTGCCGCAAACTCTTCTCCGTCCGTTGCTCCGCCGACTCCGATTTTGACCCAAAACTCTTCCGTAAGAATCTCACAAGAAGTGAGAATTATAACCGCAAAGGCTTTGGTCACAAGGAAGAGACCCTCAAACTCATGAATCGCGAGTACACAAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTTGAGTATACATGGGGTAATGTCACTGTGATGCTAGCCGAATCCTTTGGATTTTGTTGGGGGGTTGAGAGGGCTGTTCAAATTGCTTATGAAGCCAGGAAACAATTTCCTGATGAAAAAATTTGGATTACCAATGAAATTATCCACAACCCAACTGTTAATAAGCGGCTAGAGGAGATGGAAGTGCAGAATATTCCAATTGGAGAAGGGAAGAAACAATTTGAGGTTGTTAACAAGGGTGATGTAGTCATACTGCCTGCTTTTGGAGCCGCAGTTGACGAGATGTTGACCTTGAGTGAGAAAAATGTTCAAATCGTCGATACAACTTGCCCGTGGGTTTCAAAGGTATGGAATGTTGTCGAAAAGCACAAAAAAGGAGACTATACCTCGATAATTCATGGTAAATATGCCCATGAGGAAACCGTAGCAACTGCATCTTTTGCTGGAAAATACATAATTGTGAAAAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTTAATGGATCCAGTTCAACCAGAGAGGCATTTTTCGAGAAATTTAAATTTGCCCTTTCTAAGGGCTTTGATCCAGACAGTGACCTGGTAAAACTTGGCATTGCAAATCAGACAACAATGCTCAAGGGAGAGACTGAAGAGATCGGCAGACTAGTGGAGAGGACTATGATGCGTAAATATGGCGTGGAAAACGTTACTGAGCACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATTTACAAGCTGGTGGAGAAAGATATGGATCTTATGTTAGTTGTTGGTGGCTGGAACTCGAGCAACACATCACACCTACAAGAGATAGCCGAGGAACGCGGAATTCCTTCTTACTGGATTGACAGCGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTGAATCATGGTGAGCTTGTGGAGAAAGAAAACTTTCTACCAAAGGGTCCATTAAGGATTGGTGTAACATCTGGTGCATCCACACCTGACAAGGTCGTGGAAGATGCTCTTATCAAGGTGTTTGATTTGAAAAGGGAAGAAGCATTACAACTCGTGTAA

Protein sequence

>Msa0685880

MALCSNLCLRLPATRIDVPSPTTFRCRKLFSVRCSADSDFDPKLFRKNLTRSENYNRKGFGHKEETLKLMNREYTSDIIKTLKENGFEYTWGNVTVMLAESFGFCWGVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVQNIPIGEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGEFNGSSSTREAFFEKFKFALSKGFDPDSDLVKLGIANQTTMLKGETEEIGRLVERTMMRKYGVENVTEHFISFNTICDATQERQDAIYKLVEKDMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPKGPLRIGVTSGASTPDKVVEDALIKVFDLKREEALQLV*