AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506010 MtrunA17_Chr3g0107611 92.007 538 43 0 1 538 1 538 0.0 1040
Msa0506010 MtrunA17_Chr3g0107541 67.039 537 171 3 1 537 1 531 0.0 722
Msa0506010 MtrunA17_Chr8g0370651 59.004 522 211 2 16 537 10 528 0.0 649
Msa0506010 MtrunA17_Chr8g0370641 57.306 527 219 4 12 537 3 524 0.0 636
Msa0506010 MtrunA17_Chr3g0107561 69.782 321 92 2 6 326 1 316 1.59e-166 475
Msa0506010 MtrunA17_Chr3g0105751 65.472 307 100 3 24 329 20 321 5.89e-147 427
Msa0506010 MtrunA17_Chr3g0107581 88.158 152 15 1 80 231 1 149 2.54e-96 289
Msa0506010 MtrunA17_Chr3g0107551 65.385 208 71 1 330 537 4 210 4.95e-94 285
Msa0506010 MtrunA17_Chr7g0254641 33.849 517 318 10 33 537 16 520 5.01e-93 293
Msa0506010 MtrunA17_Chr3g0105761 62.319 207 75 2 332 538 1 204 2.69e-87 268
Msa0506010 MtrunA17_Chr8g0344191 30.843 522 336 14 19 537 45 544 3.87e-71 237
Msa0506010 MtrunA17_Chr8g0344151 30.769 494 323 11 47 537 33 510 4.48e-71 236
Msa0506010 MtrunA17_Chr7g0255531 29.942 521 338 10 23 537 3 502 1.19e-69 232
Msa0506010 MtrunA17_Chr3g0094171 29.333 525 352 9 16 537 5 513 5.57e-69 230
Msa0506010 MtrunA17_Chr3g0086651 31.352 488 310 8 59 537 41 512 8.85e-69 230
Msa0506010 MtrunA17_Chr3g0086661 31.352 488 310 8 59 537 41 512 1.33e-68 229
Msa0506010 MtrunA17_Chr8g0344181 31.250 496 318 12 47 537 35 512 6.44e-68 228
Msa0506010 MtrunA17_Chr5g0403351 29.243 489 314 10 23 502 7 472 6.41e-66 222
Msa0506010 MtrunA17_Chr1g0200961 30.595 487 309 9 27 506 6 470 1.14e-64 218
Msa0506010 MtrunA17_Chr8g0372341 53.500 200 93 0 16 215 10 209 1.21e-64 209
Msa0506010 MtrunA17_Chr2g0310381 27.859 481 327 7 23 502 1 462 1.53e-64 218
Msa0506010 MtrunA17_Chr4g0061381 31.084 489 308 8 59 537 40 509 1.65e-64 218
Msa0506010 MtrunA17_Chr6g0484811 29.051 506 325 11 15 510 1 482 3.98e-64 217
Msa0506010 MtrunA17_Chr2g0310391 27.027 481 331 7 23 502 1 462 1.27e-63 216
Msa0506010 MtrunA17_Chr6g0484841 28.842 475 300 10 39 502 26 473 1.90e-63 216
Msa0506010 MtrunA17_Chr8g0382901 29.501 461 296 9 46 502 488 923 2.19e-63 223
Msa0506010 MtrunA17_Chr8g0382901 27.859 481 308 8 24 502 1 444 4.60e-60 214
Msa0506010 MtrunA17_Chr1g0174461 28.462 520 348 11 18 532 5 505 1.72e-62 213
Msa0506010 MtrunA17_Chr3g0116681 28.298 523 340 14 16 530 7 502 2.48e-62 213
Msa0506010 MtrunA17_Chr4g0057001 29.273 509 335 11 33 537 33 520 6.28e-62 212
Msa0506010 MtrunA17_Chr8g0339311 29.502 522 342 8 32 537 16 527 1.51e-61 211
Msa0506010 MtrunA17_Chr7g0235551 30.242 496 306 13 18 499 5 474 2.53e-61 210
Msa0506010 MtrunA17_Chr3g0086691 29.339 484 325 7 59 537 41 512 4.22e-61 209
Msa0506010 MtrunA17_Chr8g0362481 29.688 448 296 9 92 534 5 438 5.50e-61 207
Msa0506010 MtrunA17_Chr4g0053621 26.327 490 328 9 16 499 1 463 1.17e-60 208
Msa0506010 MtrunA17_Chr1g0174441 28.154 547 361 13 2 534 1 529 1.76e-60 208
Msa0506010 MtrunA17_Chr3g0101661 29.303 488 312 8 23 502 11 473 3.22e-60 207
Msa0506010 MtrunA17_Chr3g0094231 27.902 491 330 8 50 537 36 505 5.88e-60 206
Msa0506010 MtrunA17_Chr3g0101731 27.634 503 334 10 13 510 1 478 7.24e-60 206
Msa0506010 MtrunA17_Chr3g0084921 29.356 528 329 16 23 532 10 511 7.27e-60 206
Msa0506010 MtrunA17_Chr3g0116741 27.755 490 325 8 25 509 26 491 8.18e-60 206
Msa0506010 MtrunA17_Chr6g0466331 28.513 491 322 9 19 502 2 470 9.77e-60 206
Msa0506010 MtrunA17_Chr6g0451781 28.740 508 344 10 38 537 64 561 1.02e-59 207
Msa0506010 MtrunA17_Chr3g0101611 29.590 463 292 11 45 499 33 469 1.05e-59 206
Msa0506010 MtrunA17_Chr6g0465511 28.513 491 322 9 19 502 2 470 1.84e-59 205
Msa0506010 MtrunA17_Chr6g0451751 27.888 502 346 7 44 537 35 528 2.69e-59 205
Msa0506010 MtrunA17_Chr2g0314721 28.952 525 332 13 7 527 3 490 4.69e-59 204
Msa0506010 MtrunA17_Chr7g0224551 31.656 477 276 15 46 502 27 473 4.79e-59 204
Msa0506010 MtrunA17_Chr8g0372591 61.806 144 54 1 329 471 1 144 9.03e-59 191
Msa0506010 MtrunA17_Chr4g0058201 28.858 499 321 11 41 530 19 492 9.24e-59 202
Msa0506010 MtrunA17_Chr5g0445461 29.293 495 315 10 23 510 11 477 9.69e-59 203
Msa0506010 MtrunA17_Chr3g0101701 29.472 492 307 10 23 502 11 474 1.81e-58 202
Msa0506010 MtrunA17_Chr8g0361471 28.106 491 324 9 19 502 2 470 1.98e-58 202
Msa0506010 MtrunA17_Chr3g0082701 29.050 537 361 11 13 537 1 529 2.42e-58 202
Msa0506010 MtrunA17_Chr4g0058231 26.112 517 349 10 23 528 1 495 4.12e-58 201
Msa0506010 MtrunA17_Chr4g0047631 26.128 532 352 13 12 528 4 509 8.35e-58 201
Msa0506010 MtrunA17_Chr8g0362701 28.480 467 318 9 73 534 52 507 1.33e-57 200
Msa0506010 MtrunA17_Chr4g0008101 27.593 511 338 9 44 537 33 528 1.45e-57 200
Msa0506010 MtrunA17_Chr2g0304871 28.226 496 335 12 49 536 36 518 1.63e-57 200
Msa0506010 MtrunA17_Chr1g0174471 28.513 491 321 13 18 499 20 489 1.64e-57 200
Msa0506010 MtrunA17_Chr5g0446161 29.026 503 303 14 23 506 6 473 3.46e-57 199
Msa0506010 MtrunA17_Chr6g0466901 27.273 517 366 8 26 537 10 521 5.28e-57 199
Msa0506010 MtrunA17_Chr5g0395331 28.361 476 313 11 27 499 20 470 7.74e-57 198
Msa0506010 MtrunA17_Chr8g0356001 27.236 492 328 9 16 499 3 472 8.50e-57 198
Msa0506010 MtrunA17_Chr5g0445441 27.551 490 330 8 23 510 52 518 9.14e-57 198
Msa0506010 MtrunA17_Chr5g0395321 29.065 492 299 12 19 499 11 463 9.46e-57 198
Msa0506010 MtrunA17_Chr8g0390881 27.600 500 324 12 23 510 8 481 1.12e-56 197
Msa0506010 MtrunA17_Chr7g0224561 31.237 477 278 15 46 502 27 473 1.13e-56 197
Msa0506010 MtrunA17_Chr5g0401681 27.778 486 312 14 22 499 5 459 1.16e-56 197
Msa0506010 MtrunA17_Chr3g0101601 28.656 506 314 12 20 514 8 477 2.43e-56 196
Msa0506010 MtrunA17_Chr5g0431641 27.255 499 334 9 14 510 6 477 2.53e-56 196
Msa0506010 MtrunA17_Chr5g0403331 26.854 499 337 11 20 510 3 481 2.87e-56 196
Msa0506010 MtrunA17_Chr4g0047691 26.616 526 343 14 18 528 15 512 4.77e-56 196
Msa0506010 MtrunA17_Chr5g0405001 28.778 483 294 13 46 510 40 490 5.03e-56 196
Msa0506010 MtrunA17_Chr4g0056951 28.918 453 305 8 87 537 78 515 6.93e-56 196
Msa0506010 MtrunA17_Chr4g0052881 28.517 526 331 14 13 531 4 491 7.24e-56 195
Msa0506010 MtrunA17_Chr4g0046631 26.547 501 337 12 48 537 43 523 7.63e-56 196
Msa0506010 MtrunA17_Chr1g0176831 27.930 512 330 11 20 527 33 509 1.86e-55 194
Msa0506010 MtrunA17_Chr1g0174451 27.519 516 349 13 23 532 10 506 2.31e-55 194
Msa0506010 MtrunA17_Chr3g0101711 27.846 492 314 10 23 502 11 473 2.31e-55 194
Msa0506010 MtrunA17_Chr4g0052861 27.672 524 341 15 11 531 2 490 2.85e-55 193
Msa0506010 MtrunA17_Chr4g0047661 26.046 526 356 13 16 528 9 514 5.66e-55 193
Msa0506010 MtrunA17_Chr6g0466941 28.625 531 351 13 15 537 12 522 6.86e-55 193
Msa0506010 MtrunA17_Chr4g0035921 27.579 504 322 13 23 510 14 490 8.13e-55 192
Msa0506010 MtrunA17_Chr3g0101651 28.024 496 309 12 23 502 11 474 8.44e-55 192
Msa0506010 MtrunA17_Chr7g0258221 26.476 525 352 12 18 532 5 505 1.05e-54 192
Msa0506010 MtrunA17_Chr5g0430101 26.923 494 320 13 24 506 11 474 1.68e-54 191
Msa0506010 MtrunA17_Chr5g0445381 27.108 498 328 10 22 510 37 508 2.05e-54 192
Msa0506010 MtrunA17_Chr5g0445451 27.551 490 330 8 23 510 11 477 2.07e-54 191
Msa0506010 MtrunA17_Chr4g0047641 25.948 501 343 11 18 510 13 493 3.14e-54 191
Msa0506010 MtrunA17_Chr3g0101671 27.992 493 327 9 25 510 11 482 3.20e-54 191
Msa0506010 MtrunA17_Chr8g0355961 27.439 492 327 9 16 499 3 472 4.01e-54 191
Msa0506010 MtrunA17_Chr4g0058261 28.322 459 299 12 52 502 64 500 4.78e-54 191
Msa0506010 MtrunA17_Chr1g0174481 28.719 484 322 13 19 499 5 468 5.04e-54 190
Msa0506010 MtrunA17_Chr6g0472311 24.723 542 363 14 12 532 1 518 5.47e-54 190
Msa0506010 MtrunA17_Chr8g0372251 28.092 477 306 11 46 510 31 482 5.57e-54 190
Msa0506010 MtrunA17_Chr4g0030711 29.054 444 285 10 70 499 54 481 6.15e-54 191
Msa0506010 MtrunA17_Chr5g0430031 26.613 496 321 12 24 506 12 477 8.20e-54 190
Msa0506010 MtrunA17_Chr6g0451741 25.859 553 387 10 2 537 4 550 1.26e-53 190
Msa0506010 MtrunA17_Chr5g0401691 25.625 480 330 10 21 499 23 476 1.38e-53 189
Msa0506010 MtrunA17_Chr5g0431671 26.866 469 319 6 44 510 32 478 2.50e-53 188
Msa0506010 MtrunA17_Chr5g0446151 29.512 471 285 14 48 506 39 474 2.74e-53 188
Msa0506010 MtrunA17_Chr4g0030701 29.185 466 290 12 51 499 36 478 3.24e-53 188
Msa0506010 MtrunA17_Chr5g0431501 26.531 490 334 10 50 532 33 503 3.83e-53 188
Msa0506010 MtrunA17_Chr5g0431461 26.531 490 334 10 50 532 33 503 3.83e-53 188
Msa0506010 MtrunA17_Chr5g0395381 27.812 489 284 11 19 499 11 438 3.94e-53 187
Msa0506010 MtrunA17_Chr4g0058281 26.860 484 326 9 25 502 21 482 1.33e-52 187
Msa0506010 MtrunA17_Chr5g0445531 27.039 466 308 7 50 510 38 476 1.47e-52 186
Msa0506010 MtrunA17_Chr7g0246221 26.819 481 330 7 23 499 7 469 2.21e-52 186
Msa0506010 MtrunA17_Chr2g0296651 26.078 487 331 9 13 499 2 459 2.83e-52 185
Msa0506010 MtrunA17_Chr3g0101621 27.198 489 313 10 23 502 6 460 5.31e-52 184
Msa0506010 MtrunA17_Chr1g0160851 26.195 481 326 12 23 499 8 463 6.29e-52 184
Msa0506010 MtrunA17_Chr5g0430081 26.707 498 318 14 24 506 10 475 8.70e-52 184
Msa0506010 MtrunA17_Chr2g0314731 27.148 512 334 11 20 527 3 479 2.19e-51 182
Msa0506010 MtrunA17_Chr1g0197891 29.268 451 297 9 49 499 33 461 3.75e-51 182
Msa0506010 MtrunA17_Chr3g0101631 26.939 490 319 9 20 502 8 465 3.92e-51 182
Msa0506010 MtrunA17_Chr5g0445421 27.033 492 303 10 24 510 90 530 4.32e-51 183
Msa0506010 MtrunA17_Chr3g0101691 27.459 488 322 10 23 502 11 474 4.38e-51 182
Msa0506010 MtrunA17_Chr1g0205361 27.193 456 302 12 49 499 33 463 5.00e-51 182
Msa0506010 MtrunA17_Chr1g0207841 28.539 438 284 9 76 499 58 480 5.65e-51 182
Msa0506010 MtrunA17_Chr6g0451691 26.848 514 340 10 44 537 35 532 5.67e-51 182
Msa0506010 MtrunA17_Chr3g0101811 26.562 512 328 12 23 510 6 493 5.96e-51 182
Msa0506010 MtrunA17_Chr7g0265611 26.380 489 330 11 29 510 29 494 6.64e-51 182
Msa0506010 MtrunA17_Chr5g0430091 27.108 498 320 14 23 506 9 477 7.02e-51 182
Msa0506010 MtrunA17_Chr1g0213671 27.426 474 317 10 32 499 21 473 7.09e-51 182
Msa0506010 MtrunA17_Chr6g0463801 29.202 476 294 11 41 506 28 470 1.02e-50 181
Msa0506010 MtrunA17_Chr1g0197881 28.842 475 314 10 27 499 8 460 1.05e-50 181
Msa0506010 MtrunA17_Chr1g0197851 28.782 476 314 10 27 499 8 461 1.42e-50 181
Msa0506010 MtrunA17_Chr5g0403321 27.021 470 316 9 49 510 33 483 1.47e-50 181
Msa0506010 MtrunA17_Chr5g0430131 26.358 497 324 13 23 506 9 476 1.89e-50 181
Msa0506010 MtrunA17_Chr1g0205371 27.140 479 326 11 23 499 7 464 2.26e-50 180
Msa0506010 MtrunA17_Chr3g0101581 26.884 491 327 12 20 502 5 471 3.26e-50 180
Msa0506010 MtrunA17_Chr4g0020041 26.465 495 329 10 17 502 3 471 8.37e-50 179
Msa0506010 MtrunA17_Chr4g0039901 26.696 457 314 9 44 499 29 465 1.61e-49 178
Msa0506010 MtrunA17_Chr1g0162811 27.755 490 321 13 20 502 6 469 2.59e-49 177
Msa0506010 MtrunA17_Chr1g0198191 26.506 498 343 12 19 510 14 494 2.72e-49 177
Msa0506010 MtrunA17_Chr4g0011921 27.093 454 311 8 51 502 30 465 3.06e-49 177
Msa0506010 MtrunA17_Chr3g0101721 26.854 499 318 10 29 510 12 480 3.19e-49 177
Msa0506010 MtrunA17_Chr4g0024771 27.066 484 322 11 24 502 12 469 3.26e-49 177
Msa0506010 MtrunA17_Chr3g0101751 27.706 545 335 15 15 539 5 510 4.63e-49 177
Msa0506010 MtrunA17_Chr6g0458561 28.824 510 324 15 44 538 48 533 5.01e-49 177
Msa0506010 MtrunA17_Chr4g0058191 25.341 513 349 12 25 530 2 487 7.42e-49 176
Msa0506010 MtrunA17_Chr4g0039391 25.478 471 324 10 67 531 50 499 8.10e-49 176
Msa0506010 MtrunA17_Chr1g0197871 27.778 450 303 9 50 499 34 461 1.27e-48 175
Msa0506010 MtrunA17_Chr1g0162801 27.403 489 327 10 20 502 6 472 1.44e-48 176
Msa0506010 MtrunA17_Chr8g0377341 27.626 514 310 16 15 499 15 495 3.52e-48 175
Msa0506010 MtrunA17_Chr5g0431511 25.709 494 333 9 50 532 33 503 5.70e-48 174
Msa0506010 MtrunA17_Chr8g0339331 26.587 504 340 12 46 537 34 519 6.18e-48 174
Msa0506010 MtrunA17_Chr4g0052851 26.566 463 300 13 41 499 24 450 8.08e-48 173
Msa0506010 MtrunA17_Chr8g0372331 58.462 130 53 1 408 537 1 129 4.77e-47 160
Msa0506010 MtrunA17_Chr3g0101761 27.291 502 322 11 23 510 6 478 5.23e-47 171
Msa0506010 MtrunA17_Chr5g0432751 26.569 478 312 13 46 509 29 481 8.98e-47 171
Msa0506010 MtrunA17_Chr7g0218611 25.328 458 320 10 48 502 31 469 1.60e-46 170
Msa0506010 MtrunA17_Chr3g0101571 26.496 468 314 9 48 510 34 476 2.21e-46 169
Msa0506010 MtrunA17_Chr4g0011901 25.490 459 312 8 51 502 30 465 2.28e-46 169
Msa0506010 MtrunA17_Chr2g0280261 28.664 464 290 11 48 502 32 463 3.32e-46 169
Msa0506010 MtrunA17_Chr3g0101831 25.703 498 336 9 23 510 6 479 4.05e-46 169
Msa0506010 MtrunA17_Chr1g0156101 25.887 479 321 12 39 502 21 480 4.05e-46 169
Msa0506010 MtrunA17_Chr3g0101821 25.540 509 337 11 13 510 1 478 4.77e-46 169
Msa0506010 MtrunA17_Chr4g0076161 24.400 500 331 12 20 502 3 472 1.10e-45 167
Msa0506010 MtrunA17_Chr4g0074581 28.448 464 309 9 50 505 69 517 2.36e-45 167
Msa0506010 MtrunA17_Chr1g0164211 26.316 456 310 8 47 499 28 460 2.59e-45 166
Msa0506010 MtrunA17_Chr4g0011961 25.482 467 322 10 41 502 19 464 2.89e-45 166
Msa0506010 MtrunA17_Chr3g0101801 25.794 504 337 9 20 510 6 485 3.21e-45 166
Msa0506010 MtrunA17_Chr7g0218601 25.470 479 329 12 27 502 15 468 3.46e-45 166
Msa0506010 MtrunA17_Chr8g0371761 53.472 144 56 1 350 482 1 144 5.95e-45 155
Msa0506010 MtrunA17_Chr7g0246131 25.514 486 333 7 23 500 7 471 6.10e-45 166
Msa0506010 MtrunA17_Chr1g0167321 26.446 484 328 7 25 502 8 469 3.57e-44 163
Msa0506010 MtrunA17_Chr6g0451641 25.458 546 365 17 3 537 7 521 4.54e-44 163
Msa0506010 MtrunA17_Chr1g0200951 28.685 502 300 18 53 532 64 529 6.02e-44 163
Msa0506010 MtrunA17_Chr6g0463791 24.646 495 324 13 24 502 7 468 1.37e-43 162
Msa0506010 MtrunA17_Chr4g0046321 27.813 471 291 16 51 502 35 475 1.49e-43 162
Msa0506010 MtrunA17_Chr5g0419691 25.272 459 319 9 48 502 27 465 2.43e-43 161
Msa0506010 MtrunA17_Chr8g0346261 26.087 483 331 13 52 531 86 545 4.20e-43 161
Msa0506010 MtrunA17_Chr2g0296661 26.619 417 286 8 86 499 65 464 4.23e-43 160
Msa0506010 MtrunA17_Chr5g0406651 25.751 466 326 9 39 502 19 466 6.76e-43 159
Msa0506010 MtrunA17_Chr1g0156081 26.216 473 313 12 46 502 52 504 1.08e-42 160
Msa0506010 MtrunA17_Chr4g0046331 27.158 475 291 17 51 502 35 477 1.31e-42 159
Msa0506010 MtrunA17_Chr4g0011871 24.370 476 337 9 48 521 27 481 1.42e-42 159
Msa0506010 MtrunA17_Chr5g0419451 26.991 452 295 13 56 499 62 486 1.42e-42 159
Msa0506010 MtrunA17_Chr8g0351801 28.082 438 263 11 90 499 71 484 1.54e-42 159
Msa0506010 MtrunA17_Chr4g0011981 25.855 468 320 11 41 502 19 465 1.73e-42 158
Msa0506010 MtrunA17_Chr4g0046351 26.850 473 293 17 51 502 35 475 2.22e-42 159
Msa0506010 MtrunA17_Chr8g0357421 25.896 502 329 10 23 510 6 478 4.08e-42 157
Msa0506010 MtrunA17_Chr3g0101741 26.402 428 278 9 90 510 3 400 1.31e-41 154
Msa0506010 MtrunA17_Chr4g0011881 26.316 456 311 11 51 502 31 465 2.52e-41 155
Msa0506010 MtrunA17_Chr8g0357431 26.295 502 328 12 23 510 6 479 5.10e-41 154
Msa0506010 MtrunA17_Chr7g0246151 25.359 418 292 6 87 500 68 469 1.39e-40 153
Msa0506010 MtrunA17_Chr5g0430111 24.775 444 292 13 24 453 12 427 7.19e-40 150
Msa0506010 MtrunA17_Chr1g0210091 25.059 427 299 11 90 510 103 514 1.04e-39 151
Msa0506010 MtrunA17_Chr4g0017411 25.156 481 317 14 41 516 21 463 1.08e-38 148
Msa0506010 MtrunA17_Chr7g0246181 25.734 443 308 6 61 500 45 469 6.89e-38 145
Msa0506010 MtrunA17_Chr7g0258211 26.959 434 262 14 90 499 76 478 1.07e-37 145
Msa0506010 MtrunA17_Chr2g0310351 34.884 172 109 1 331 502 1 169 5.17e-37 135
Msa0506010 MtrunA17_Chr7g0246121 24.337 415 296 5 87 499 68 466 2.08e-36 141
Msa0506010 MtrunA17_Chr5g0430071 28.520 277 179 6 240 506 63 330 1.68e-35 136
Msa0506010 MtrunA17_Chr8g0364651 22.631 517 369 11 24 532 6 499 4.25e-34 135
Msa0506010 MtrunA17_Chr5g0431591 29.496 278 187 3 236 510 24 295 4.97e-34 131
Msa0506010 MtrunA17_Chr2g0280071 24.390 492 339 14 24 502 37 508 2.45e-33 135
Msa0506010 MtrunA17_Chr1g0160861 29.762 252 168 5 249 499 61 304 2.63e-33 129
Msa0506010 MtrunA17_Chr4g0046681 29.952 207 143 2 331 537 31 235 4.69e-33 126
Msa0506010 MtrunA17_Chr6g0451811 33.014 209 138 2 329 537 3 209 4.90e-33 125
Msa0506010 MtrunA17_Chr5g0409051 25.268 467 324 10 46 500 25 478 7.37e-33 131
Msa0506010 MtrunA17_Chr1g0156061 24.468 470 271 13 40 502 44 436 1.31e-32 130
Msa0506010 MtrunA17_Chr2g0314781 37.017 181 99 2 347 527 1 166 1.45e-32 122
Msa0506010 MtrunA17_Chr1g0174431 35.838 173 106 2 331 499 1 172 2.42e-32 123
Msa0506010 MtrunA17_Chr2g0280121 24.755 408 284 9 104 502 88 481 4.52e-32 129
Msa0506010 MtrunA17_Chr6g0451681 30.705 241 156 5 302 537 247 481 3.74e-31 126
Msa0506010 MtrunA17_Chr6g0451681 25.794 252 155 10 4 241 23 256 9.62e-12 67.4
Msa0506010 MtrunA17_Chr2g0280081 23.230 452 327 9 87 532 568 1005 8.96e-31 127
Msa0506010 MtrunA17_Chr2g0280081 24.883 426 293 10 87 502 67 475 6.93e-29 122
Msa0506010 MtrunA17_Chr8g0390871 33.511 188 120 4 324 510 20 203 3.49e-30 118
Msa0506010 MtrunA17_Chr5g0446101 32.340 235 146 6 272 502 57 282 8.14e-30 119
Msa0506010 MtrunA17_Chr4g0058211 28.111 217 153 1 314 530 2 215 1.97e-29 115
Msa0506010 MtrunA17_Chr8g0387101 24.664 446 309 13 97 532 79 507 9.17e-29 119
Msa0506010 MtrunA17_Chr5g0402981 32.474 194 128 3 345 537 6 197 2.74e-28 111
Msa0506010 MtrunA17_Chr4g0046661 27.570 214 153 2 324 537 18 229 6.07e-28 112
Msa0506010 MtrunA17_Chr6g0451771 31.280 211 135 3 331 537 22 226 2.00e-26 107
Msa0506010 MtrunA17_Chr2g0280011 28.846 208 141 3 330 532 7 212 4.84e-26 105
Msa0506010 MtrunA17_Chr5g0413911 21.684 475 334 12 47 499 39 497 1.96e-25 110
Msa0506010 MtrunA17_Chr3g0101591 34.054 185 112 3 333 510 34 215 2.43e-25 104
Msa0506010 MtrunA17_Chr6g0477081 32.990 194 115 3 249 442 64 242 3.54e-25 104
Msa0506010 MtrunA17_Chr2g0280061 30.899 178 117 2 330 502 7 183 8.49e-25 102
Msa0506010 MtrunA17_Chr4g0046701 32.727 165 109 2 373 537 1 163 1.14e-24 100
Msa0506010 MtrunA17_Chr4g0011851 26.214 206 143 3 318 521 1 199 1.70e-23 99.0
Msa0506010 MtrunA17_Chr2g0280041 22.078 462 320 12 87 532 99 536 1.92e-23 103
Msa0506010 MtrunA17_Chr3g0086681 38.583 127 77 1 374 499 8 134 3.74e-23 96.7
Msa0506010 MtrunA17_Chr5g0445761 32.558 172 113 1 331 502 1 169 4.08e-23 97.4
Msa0506010 MtrunA17_Chr5g0429651 24.034 466 287 18 48 478 25 458 5.50e-23 102
Msa0506010 MtrunA17_Chr6g0463621 28.902 173 121 2 331 502 1 172 9.02e-23 96.3
Msa0506010 MtrunA17_Chr5g0430151 30.667 150 100 2 362 510 6 152 1.37e-22 95.1
Msa0506010 MtrunA17_Chr4g0011941 27.907 172 121 1 331 502 1 169 1.71e-22 95.5
Msa0506010 MtrunA17_Chr5g0402971 24.627 268 190 6 51 314 41 300 3.76e-22 97.4
Msa0506010 MtrunA17_Chr5g0444981 34.969 163 102 2 337 499 17 175 5.80e-22 94.4
Msa0506010 MtrunA17_Chr5g0445751 26.687 326 205 11 11 329 7 305 7.68e-22 96.3
Msa0506010 MtrunA17_Chr5g0423621 32.680 153 98 2 347 499 1 148 8.68e-22 92.8
Msa0506010 MtrunA17_Chr5g0445371 27.706 231 131 4 282 510 11 207 1.18e-21 94.4
Msa0506010 MtrunA17_Chr7g0255131 23.467 473 320 16 22 478 11 457 1.88e-21 97.8
Msa0506010 MtrunA17_Chr5g0445351 33.803 142 91 1 359 500 52 190 4.58e-21 92.0
Msa0506010 MtrunA17_Chr5g0430041 30.464 151 101 3 357 506 1 148 5.33e-20 87.8
Msa0506010 MtrunA17_Chr4g0046691 24.436 266 175 6 51 312 40 283 1.51e-19 89.7
Msa0506010 MtrunA17_Chr1g0164321 26.562 256 165 6 239 478 249 497 4.73e-19 90.5
Msa0506010 MtrunA17_Chr4g0038271 23.503 451 291 17 57 478 85 510 1.55e-18 89.0
Msa0506010 MtrunA17_Chr8g0387001 23.591 479 307 19 30 478 6 455 8.38e-18 86.7
Msa0506010 MtrunA17_Chr3g0116731 35.897 117 68 1 382 498 1 110 9.81e-18 80.1
Msa0506010 MtrunA17_Chr8g0348751 23.128 454 299 17 53 478 29 460 1.46e-17 85.9
Msa0506010 MtrunA17_Chr8g0364631 22.152 474 336 8 50 510 32 485 1.79e-17 85.5
Msa0506010 MtrunA17_Chr0c19g0493771 23.923 418 267 18 100 499 234 618 3.81e-17 84.7
Msa0506010 MtrunA17_Chr4g0011861 23.132 281 200 7 48 326 27 293 1.84e-16 80.5
Msa0506010 MtrunA17_Chr6g0463611 23.492 315 201 11 23 326 21 306 1.88e-16 80.9
Msa0506010 MtrunA17_Chr5g0445361 35.514 107 66 1 404 510 11 114 3.46e-16 75.5
Msa0506010 MtrunA17_Chr4g0028321 34.783 138 77 5 382 510 1 134 5.61e-16 75.9
Msa0506010 MtrunA17_Chr3g0117301 31.356 118 78 1 382 499 1 115 5.87e-16 74.3
Msa0506010 MtrunA17_Chr1g0174421 23.934 305 216 9 23 326 22 311 7.28e-16 79.0
Msa0506010 MtrunA17_Chr4g0030741 24.739 287 187 9 76 354 84 349 3.75e-15 77.0
Msa0506010 MtrunA17_Chr3g0101541 33.051 118 76 1 382 499 4 118 4.09e-15 72.4
Msa0506010 MtrunA17_Chr4g0011931 23.203 306 214 8 25 326 4 292 5.58e-15 75.9
Msa0506010 MtrunA17_Chr4g0046671 21.771 271 193 5 51 315 45 302 9.46e-15 75.5
Msa0506010 MtrunA17_Chr5g0445411 27.841 176 118 3 6 177 1 171 3.34e-14 70.9
Msa0506010 MtrunA17_Chr6g0449341 24.354 271 183 8 263 513 286 554 4.43e-14 75.1
Msa0506010 MtrunA17_Chr4g0076171 27.044 159 92 2 347 502 1 138 5.68e-14 70.1
Msa0506010 MtrunA17_Chr6g0449331 23.985 271 184 6 263 513 238 506 8.09e-14 73.9
Msa0506010 MtrunA17_Chr1g0176851 26.000 250 164 7 140 385 2 234 8.59e-14 71.2
Msa0506010 MtrunA17_Chr7g0248991 24.275 276 174 10 187 448 96 350 1.00e-13 72.8
Msa0506010 MtrunA17_Chr1g0183611 25.620 242 171 5 263 497 155 394 1.67e-13 72.4
Msa0506010 MtrunA17_Chr7g0225531 21.107 488 341 14 27 497 20 480 4.24e-13 71.6
Msa0506010 MtrunA17_Chr8g0351311 21.429 350 244 9 142 478 130 461 5.04e-13 71.6
Msa0506010 MtrunA17_Chr5g0431631 27.972 143 102 1 19 161 19 160 7.95e-13 66.6
Msa0506010 MtrunA17_Chr2g0334021 20.559 501 346 16 49 531 32 498 1.49e-12 70.1
Msa0506010 MtrunA17_Chr1g0163451 23.457 243 174 6 263 497 255 493 2.09e-12 69.7
Msa0506010 MtrunA17_Chr1g0184461 21.694 484 341 16 23 496 11 466 2.45e-12 69.3
Msa0506010 MtrunA17_Chr1g0184421 20.084 478 348 17 26 496 16 466 3.03e-12 68.9
Msa0506010 MtrunA17_Chr2g0313771 22.872 376 248 15 142 504 153 499 3.34e-12 68.9
Msa0506010 MtrunA17_Chr6g0451801 21.656 314 219 8 15 315 8 307 3.89e-12 67.8
Msa0506010 MtrunA17_Chr1g0163421 22.951 244 174 7 263 497 271 509 4.20e-12 68.6
Msa0506010 MtrunA17_Chr4g0004481 24.898 245 161 7 263 495 231 464 5.27e-12 68.2
Msa0506010 MtrunA17_Chr2g0321171 27.064 218 141 7 263 478 246 447 6.40e-12 67.8
Msa0506010 MtrunA17_Chr8g0381571 22.845 232 165 5 267 494 235 456 6.97e-12 67.8
Msa0506010 MtrunA17_Chr8g0381541 22.553 235 168 5 267 497 235 459 9.88e-12 67.4
Msa0506010 MtrunA17_Chr8g0351391 20.741 270 188 6 220 478 206 460 1.19e-11 67.0
Msa0506010 MtrunA17_Chr7g0260821 25.105 239 157 8 263 496 244 465 1.27e-11 67.0
Msa0506010 MtrunA17_Chr5g0396521 21.603 287 175 9 264 511 277 552 1.38e-11 67.0
Msa0506010 MtrunA17_Chr3g0119681 19.403 469 333 12 54 498 40 487 2.11e-11 66.2
Msa0506010 MtrunA17_Chr4g0056981 40.845 71 42 0 357 427 1 71 2.97e-11 59.3
Msa0506010 MtrunA17_Chr5g0430171 25.207 242 151 7 23 257 9 227 3.27e-11 63.5
Msa0506010 MtrunA17_Chr6g0449351 23.767 223 157 6 263 478 197 413 3.37e-11 65.5
Msa0506010 MtrunA17_Chr7g0227281 26.776 183 124 5 302 478 266 444 5.92e-11 65.1
Msa0506010 MtrunA17_Chr3g0107501 24.528 265 178 9 243 500 201 450 8.50e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506010 AT4G39950.2 51.233 527 244 7 17 537 58 577 0.0 564
Msa0506010 AT4G39950.1 51.233 527 244 7 17 537 18 537 0.0 563
Msa0506010 AT2G22330.2 50.940 532 247 7 7 537 44 562 0.0 561
Msa0506010 AT2G22330.1 50.940 532 247 7 7 537 21 539 0.0 560
Msa0506010 AT5G05260.2 51.411 496 233 6 46 537 36 527 0.0 535
Msa0506010 AT5G05260.1 49.194 496 212 6 46 537 36 495 8.39e-172 495
Msa0506010 AT1G58260.1 45.577 520 273 5 24 537 10 525 1.67e-165 480
Msa0506010 AT1G79370.1 44.972 527 273 5 24 537 16 538 2.01e-158 463
Msa0506010 AT5G35917.1 46.356 494 212 9 50 537 42 488 4.33e-154 450
Msa0506010 AT1G16410.1 39.279 527 303 8 22 537 13 533 3.03e-135 403
Msa0506010 AT1G16400.1 38.060 536 314 8 15 537 2 532 6.34e-130 390
Msa0506010 AT1G16410.2 37.101 407 242 6 22 419 13 414 1.49e-94 295
Msa0506010 AT1G01280.1 35.099 453 277 8 90 537 69 509 4.49e-87 278
Msa0506010 AT5G07990.1 32.068 527 324 11 23 537 4 508 7.43e-75 246
Msa0506010 AT4G12300.1 29.767 514 328 12 33 537 26 515 5.49e-66 223
Msa0506010 AT4G12320.1 29.942 521 335 11 23 537 21 517 2.75e-64 218
Msa0506010 AT2G40890.1 29.264 516 327 13 30 537 16 501 1.86e-63 216
Msa0506010 AT4G22690.1 29.522 481 310 8 59 533 93 550 7.07e-63 216
Msa0506010 AT4G22710.1 29.545 484 306 9 59 533 62 519 7.75e-63 215
Msa0506010 AT4G37430.1 27.079 517 335 15 23 531 10 492 4.61e-60 207
Msa0506010 AT4G31940.1 29.870 462 300 10 52 498 33 485 7.39e-60 207
Msa0506010 AT2G23190.1 27.938 519 328 16 24 531 49 532 1.83e-59 206
Msa0506010 AT5G06900.1 30.088 452 290 12 50 498 34 462 3.97e-58 202
Msa0506010 AT4G31970.1 28.112 498 338 10 52 537 33 522 2.07e-57 200
Msa0506010 AT5G44620.1 28.539 445 301 6 59 502 55 483 8.08e-57 198
Msa0506010 AT4G37320.1 28.627 517 326 15 24 531 6 488 9.60e-57 197
Msa0506010 AT2G25160.1 29.924 528 342 13 23 537 6 518 4.53e-56 197
Msa0506010 AT4G37340.1 26.975 519 335 15 20 531 8 489 8.65e-56 195
Msa0506010 AT3G20140.1 28.834 489 294 15 41 509 29 483 1.05e-54 192
Msa0506010 AT5G57220.1 26.411 496 319 12 6 499 1 452 1.43e-54 192
Msa0506010 AT3G28740.1 29.870 462 287 14 45 499 34 465 2.93e-54 191
Msa0506010 AT5G36220.1 27.273 528 331 15 15 531 9 494 3.00e-54 191
Msa0506010 AT4G37370.1 27.824 478 314 13 26 499 6 456 4.26e-54 191
Msa0506010 AT2G14100.1 29.837 429 278 11 77 499 65 476 5.28e-54 191
Msa0506010 AT4G12310.1 27.049 488 327 9 59 538 53 519 7.31e-54 191
Msa0506010 AT3G20090.2 28.911 505 309 13 15 499 4 478 2.56e-53 189
Msa0506010 AT4G37410.1 25.988 481 325 13 24 499 4 458 9.52e-53 187
Msa0506010 AT3G61880.1 29.880 502 314 17 40 531 56 529 1.88e-52 187
Msa0506010 AT4G15360.1 28.687 495 311 14 18 499 9 474 2.33e-52 186
Msa0506010 AT5G67310.1 26.240 484 317 12 23 499 18 468 2.80e-52 186
Msa0506010 AT2G23220.1 27.593 511 317 18 36 531 32 504 3.04e-52 186
Msa0506010 AT4G37360.1 27.235 481 319 13 23 499 4 457 3.53e-52 186
Msa0506010 AT3G61880.2 29.880 502 314 17 40 531 56 529 4.68e-52 186
Msa0506010 AT3G48310.1 27.214 463 299 10 46 502 28 458 7.50e-52 184
Msa0506010 AT3G48280.1 27.360 519 333 13 23 533 8 490 1.03e-51 184
Msa0506010 AT4G31950.1 27.652 528 341 13 27 537 8 511 3.68e-51 183
Msa0506010 AT2G45560.1 25.510 490 340 12 18 502 7 476 3.75e-51 183
Msa0506010 AT5G04330.1 27.525 505 311 14 51 532 33 505 4.84e-51 182
Msa0506010 AT4G37310.1 24.330 522 367 13 24 536 4 506 4.94e-51 183
Msa0506010 AT4G37330.1 28.571 490 293 18 26 499 6 454 5.61e-51 182
Msa0506010 AT3G32047.1 28.438 429 283 10 77 499 64 474 5.90e-51 182
Msa0506010 AT4G15330.1 26.901 513 336 12 25 530 14 494 6.76e-51 182
Msa0506010 AT2G45550.1 26.273 491 335 12 18 502 7 476 6.79e-51 182
Msa0506010 AT2G27000.1 28.935 432 285 10 75 499 59 475 1.62e-50 181
Msa0506010 AT4G36220.1 26.042 480 295 9 57 510 47 492 2.00e-50 181
Msa0506010 AT3G26830.1 27.235 481 324 10 27 500 3 464 2.25e-50 180
Msa0506010 AT4G31500.1 26.304 460 319 8 46 502 25 467 3.45e-50 180
Msa0506010 AT4G12330.1 28.221 489 306 13 59 533 55 512 3.85e-50 180
Msa0506010 AT3G25180.1 27.256 532 350 12 16 537 8 512 4.00e-50 180
Msa0506010 AT2G45570.1 26.464 427 298 6 87 510 72 485 4.49e-50 180
Msa0506010 AT5G10610.1 25.787 508 348 11 27 530 7 489 4.88e-50 180
Msa0506010 AT1G74540.1 27.273 495 322 13 24 510 1 465 7.21e-50 179
Msa0506010 AT3G10560.1 25.800 531 369 11 6 532 4 513 2.62e-49 178
Msa0506010 AT3G52970.1 26.506 498 336 13 15 500 1 480 2.86e-49 178
Msa0506010 AT1G33720.1 25.265 471 322 11 48 510 36 484 3.16e-49 177
Msa0506010 AT1G13090.2 27.651 481 306 11 45 511 23 475 7.63e-49 176
Msa0506010 AT3G52970.2 26.471 510 335 15 15 500 1 494 1.88e-48 176
Msa0506010 AT3G48300.1 26.974 456 295 11 52 501 31 454 3.16e-48 174
Msa0506010 AT3G48300.2 26.974 456 295 11 52 501 33 456 3.29e-48 174
Msa0506010 AT4G13770.1 26.639 488 315 13 25 502 14 468 3.32e-48 175
Msa0506010 AT3G44250.1 28.392 479 300 12 45 509 23 472 5.83e-48 174
Msa0506010 AT4G37400.1 25.581 473 315 11 67 531 46 489 6.24e-48 174
Msa0506010 AT3G20130.1 28.438 429 286 8 77 499 64 477 8.33e-48 174
Msa0506010 AT1G01190.1 27.491 542 323 21 7 514 12 517 1.23e-47 174
Msa0506010 AT1G01190.2 27.491 542 323 21 7 514 17 522 1.34e-47 174
Msa0506010 AT5G35715.1 27.610 431 279 10 90 509 3 411 1.93e-47 171
Msa0506010 AT3G48270.1 28.200 461 291 14 46 499 27 454 2.36e-47 172
Msa0506010 AT1G13080.1 26.653 484 332 10 25 502 4 470 2.57e-47 172
Msa0506010 AT1G50520.1 28.257 499 321 16 16 499 4 480 3.39e-47 172
Msa0506010 AT3G20940.1 26.778 478 303 14 41 499 29 478 3.81e-47 172
Msa0506010 AT5G04630.1 25.455 495 347 7 20 510 11 487 5.71e-47 171
Msa0506010 AT1G13110.1 26.369 493 322 10 24 502 7 472 6.02e-47 171
Msa0506010 AT3G61040.1 27.115 461 304 11 45 499 28 462 7.41e-47 171
Msa0506010 AT3G20950.1 26.733 505 323 15 15 499 4 481 1.06e-46 171
Msa0506010 AT5G25120.1 26.708 483 316 14 27 502 11 462 2.24e-46 169
Msa0506010 AT1G11610.1 27.347 490 320 16 46 526 29 491 4.13e-46 169
Msa0506010 AT1G74110.1 27.410 529 352 18 3 514 9 522 4.68e-46 169
Msa0506010 AT5G04660.1 26.786 448 313 6 87 532 78 512 4.84e-46 169
Msa0506010 AT3G53300.1 27.140 479 302 13 45 506 23 471 5.35e-46 169
Msa0506010 AT4G15350.1 28.276 435 280 12 77 499 57 471 5.91e-46 169
Msa0506010 AT3G20120.4 28.211 436 280 12 77 500 63 477 9.52e-46 168
Msa0506010 AT1G11610.2 27.527 465 303 15 46 503 29 466 9.63e-46 168
Msa0506010 AT2G24180.1 26.653 484 313 12 50 520 36 490 1.10e-45 168
Msa0506010 AT3G20080.2 26.915 483 296 13 41 499 29 478 1.86e-45 167
Msa0506010 AT3G20080.1 26.915 483 296 13 41 499 29 478 1.86e-45 167
Msa0506010 AT3G48290.1 25.957 470 304 11 46 506 29 463 2.42e-45 166
Msa0506010 AT3G26170.1 25.665 526 344 16 16 529 1 491 2.60e-45 167
Msa0506010 AT3G20100.1 27.602 442 282 12 73 499 59 477 2.91e-45 167
Msa0506010 AT1G74550.1 25.192 520 347 12 24 537 3 486 3.85e-45 166
Msa0506010 AT1G66540.1 27.295 403 252 10 139 531 4 375 4.20e-45 164
Msa0506010 AT3G53280.1 26.915 483 316 10 45 516 23 479 4.39e-45 166
Msa0506010 AT5G10600.1 24.597 496 344 12 38 530 37 505 4.76e-45 166
Msa0506010 AT5G06905.1 26.326 509 321 18 27 510 9 488 4.81e-45 166
Msa0506010 AT5G57260.1 25.265 471 317 10 48 507 28 474 4.99e-45 166
Msa0506010 AT3G26280.1 24.498 498 330 14 27 510 15 480 1.77e-44 164
Msa0506010 AT5G25140.1 25.358 489 324 12 24 502 5 462 1.86e-44 164
Msa0506010 AT3G26280.2 24.498 498 330 14 27 510 32 497 2.20e-44 164
Msa0506010 AT3G20090.1 30.959 365 214 10 148 499 1 340 4.08e-44 161
Msa0506010 AT4G13310.1 25.490 459 314 11 46 499 28 463 5.05e-44 163
Msa0506010 AT1G13100.1 26.966 445 286 11 87 516 59 479 5.06e-44 163
Msa0506010 AT5G25180.1 25.773 485 316 13 28 502 12 462 6.25e-44 163
Msa0506010 AT5G47990.1 28.266 421 268 11 90 499 80 477 7.38e-44 163
Msa0506010 AT2G46660.1 27.447 470 308 15 46 510 66 507 9.64e-44 163
Msa0506010 AT3G26150.1 26.096 502 324 16 16 502 1 470 1.03e-43 162
Msa0506010 AT2G45580.1 26.139 417 290 7 87 499 72 474 1.22e-43 162
Msa0506010 AT5G42590.1 26.848 514 337 17 23 525 6 491 1.35e-43 162
Msa0506010 AT4G15330.2 25.825 515 320 13 21 530 9 466 1.40e-43 162
Msa0506010 AT4G13290.1 25.714 455 302 12 50 499 33 456 1.67e-43 161
Msa0506010 AT5G35920.1 50.676 148 71 2 390 537 8 153 3.35e-43 151
Msa0506010 AT1G28430.1 26.107 429 298 8 76 499 61 475 4.31e-43 161
Msa0506010 AT3G20110.1 25.800 500 318 15 17 500 6 468 5.91e-43 160
Msa0506010 AT1G50560.1 30.000 420 265 12 90 499 81 481 7.01e-43 160
Msa0506010 AT3G20960.2 28.369 423 265 11 90 499 79 476 7.08e-43 160
Msa0506010 AT3G26190.1 24.731 465 323 10 45 502 23 467 8.76e-43 160
Msa0506010 AT3G26270.1 26.237 465 312 12 47 502 29 471 8.78e-43 160
Msa0506010 AT3G26160.1 24.432 528 354 14 16 532 1 494 1.12e-42 159
Msa0506010 AT2G30770.1 26.176 489 325 13 47 526 30 491 1.37e-42 159
Msa0506010 AT3G26210.1 26.097 433 282 10 90 509 68 475 1.52e-42 159
Msa0506010 AT3G48320.1 25.667 487 319 13 25 505 12 461 1.57e-42 159
Msa0506010 AT5G42580.1 26.492 419 266 10 90 499 77 462 1.99e-42 159
Msa0506010 AT4G15380.1 25.837 418 284 6 87 499 77 473 2.82e-42 159
Msa0506010 AT3G26180.1 25.203 492 332 13 47 529 27 491 7.83e-42 157
Msa0506010 AT3G26320.1 25.108 462 309 10 51 502 32 466 8.13e-42 157
Msa0506010 AT3G26330.1 24.892 462 310 11 51 502 32 466 1.73e-41 156
Msa0506010 AT2G30750.1 26.585 489 323 13 47 526 30 491 2.25e-41 155
Msa0506010 AT1G33720.4 25.886 367 252 7 148 510 2 352 2.39e-41 153
Msa0506010 AT1G33720.3 25.886 367 252 7 148 510 2 352 2.39e-41 153
Msa0506010 AT1G33720.5 25.886 367 252 7 148 510 2 352 2.39e-41 153
Msa0506010 AT3G26300.1 24.898 490 329 14 23 502 6 466 2.66e-41 155
Msa0506010 AT3G26310.1 24.644 491 332 11 22 502 3 465 7.38e-41 154
Msa0506010 AT2G42250.1 24.951 513 345 13 29 526 18 505 1.04e-40 154
Msa0506010 AT3G26230.1 23.647 499 343 12 23 510 5 476 1.76e-40 153
Msa0506010 AT3G48290.2 24.400 500 306 13 46 509 29 492 2.52e-40 153
Msa0506010 AT2G45580.2 32.157 255 163 5 249 499 72 320 3.93e-40 149
Msa0506010 AT1G66540.2 29.129 333 195 10 209 531 15 316 2.49e-39 146
Msa0506010 AT3G10570.1 24.832 447 322 5 87 532 80 513 2.78e-39 150
Msa0506010 AT3G26200.1 24.893 466 323 10 44 502 22 467 4.17e-39 149
Msa0506010 AT1G33730.1 26.050 357 250 6 155 510 5 348 4.97e-39 146
Msa0506010 AT1G33730.2 26.050 357 250 6 155 510 5 348 4.97e-39 146
Msa0506010 AT3G20130.2 26.682 446 279 9 57 499 49 449 1.08e-38 148
Msa0506010 AT3G20120.2 29.282 362 226 11 148 500 1 341 1.36e-38 145
Msa0506010 AT3G20120.3 29.282 362 226 11 148 500 1 341 1.36e-38 145
Msa0506010 AT3G20120.1 29.282 362 226 11 148 500 1 341 1.36e-38 145
Msa0506010 AT1G11600.1 24.899 494 345 9 23 505 6 484 1.90e-38 148
Msa0506010 AT5G25130.1 24.896 482 326 12 27 502 11 462 1.94e-38 147
Msa0506010 AT3G26290.1 25.478 471 312 11 43 502 24 466 2.13e-38 147
Msa0506010 AT3G26290.2 25.478 471 312 11 43 502 37 479 3.36e-38 147
Msa0506010 AT3G20960.1 29.178 377 237 11 133 499 17 373 4.00e-38 145
Msa0506010 AT1G13710.1 27.790 439 280 14 103 531 101 512 7.17e-38 146
Msa0506010 AT5G36220.2 29.217 332 202 10 205 531 45 348 1.22e-37 142
Msa0506010 AT1G33720.2 23.980 392 253 8 148 510 2 377 5.55e-36 139
Msa0506010 AT2G30490.1 24.545 440 290 12 86 509 67 480 5.94e-36 140
Msa0506010 AT2G02580.1 24.691 486 334 12 26 502 4 466 7.46e-36 140
Msa0506010 AT3G26220.1 25.514 486 330 14 25 499 4 468 7.48e-36 140
Msa0506010 AT2G05180.1 25.907 386 254 10 77 451 63 427 1.70e-35 138
Msa0506010 AT5G09970.1 26.866 469 289 19 52 500 71 505 5.96e-35 138
Msa0506010 AT2G25160.2 29.793 386 247 9 23 397 6 378 7.29e-35 136
Msa0506010 AT5G24960.1 25.652 460 309 12 47 499 30 463 2.14e-34 136
Msa0506010 AT5G24950.1 22.609 460 323 11 47 499 29 462 2.39e-34 136
Msa0506010 AT1G64940.1 23.960 505 332 14 50 531 33 508 3.90e-34 135
Msa0506010 AT2G27010.1 30.112 269 167 6 269 530 222 476 7.03e-34 134
Msa0506010 AT3G20080.4 27.807 374 215 12 148 499 1 341 1.94e-33 131
Msa0506010 AT3G20080.5 27.807 374 215 12 148 499 1 341 1.94e-33 131
Msa0506010 AT3G20080.6 27.807 374 215 12 148 499 1 341 1.94e-33 131
Msa0506010 AT3G20080.3 27.807 374 215 12 148 499 1 341 1.94e-33 131
Msa0506010 AT1G64950.1 25.050 503 329 17 50 531 32 507 1.90e-31 128
Msa0506010 AT3G20935.1 35.465 172 108 2 330 499 133 303 2.14e-31 125
Msa0506010 AT4G20240.1 24.163 418 289 12 47 459 30 424 6.17e-31 125
Msa0506010 AT2G12190.1 24.043 470 314 13 50 499 32 478 1.69e-29 122
Msa0506010 AT3G25180.2 26.598 391 256 10 16 397 8 376 2.18e-29 120
Msa0506010 AT1G13080.2 24.286 350 247 6 157 502 17 352 7.27e-29 118
Msa0506010 AT3G61040.2 25.389 386 259 10 45 424 28 390 1.37e-28 117
Msa0506010 AT4G13310.2 24.282 383 266 9 46 424 28 390 3.09e-28 117
Msa0506010 AT1G64930.1 21.670 503 347 14 50 531 32 508 8.03e-28 117
Msa0506010 AT3G03470.1 23.387 496 336 14 23 499 7 477 1.26e-27 116
Msa0506010 AT1G58265.1 44.068 118 53 3 421 534 12 120 3.07e-26 105
Msa0506010 AT3G56630.1 23.667 469 330 13 53 511 30 480 1.04e-24 107
Msa0506010 AT3G26180.2 30.000 210 140 4 297 502 130 336 2.58e-24 105
Msa0506010 AT2G45580.3 23.392 342 247 6 87 424 72 402 2.85e-24 105
Msa0506010 AT4G20240.2 23.037 382 267 11 47 424 30 388 5.17e-23 101
Msa0506010 AT3G53290.1 27.094 406 256 15 106 508 11 379 6.70e-23 101
Msa0506010 AT1G34540.1 22.993 461 331 12 26 478 3 447 1.86e-22 101
Msa0506010 AT5G25900.1 20.825 485 347 13 57 531 50 507 4.98e-22 99.8
Msa0506010 AT5G61320.1 23.877 423 278 12 87 499 68 456 1.99e-21 97.8
Msa0506010 AT1G64900.1 23.297 455 320 13 87 531 68 503 7.05e-21 96.3
Msa0506010 AT5G24960.2 23.896 385 264 10 47 425 30 391 4.08e-19 90.1
Msa0506010 AT4G39490.1 22.756 479 321 17 26 478 11 466 4.83e-19 90.9
Msa0506010 AT5G58860.1 22.907 454 295 14 53 478 32 458 5.45e-19 90.5
Msa0506010 AT5G23190.1 27.559 254 160 10 239 478 247 490 2.48e-18 88.6
Msa0506010 AT1G57750.1 26.667 240 165 4 263 499 236 467 3.62e-18 87.8
Msa0506010 AT2G45970.1 22.083 480 318 18 30 478 6 460 3.45e-17 85.1
Msa0506010 AT1G31800.1 22.120 434 277 17 100 510 155 550 5.45e-17 84.7
Msa0506010 AT4G00360.1 21.622 481 320 18 30 478 6 461 7.51e-17 84.0
Msa0506010 AT1G13090.1 27.758 281 169 8 45 316 23 278 2.01e-16 80.5
Msa0506010 AT4G32170.1 26.141 241 171 5 263 498 235 473 2.76e-16 82.0
Msa0506010 AT4G39500.2 25.410 244 171 5 263 498 246 486 3.91e-16 81.6
Msa0506010 AT1G13140.1 21.705 516 319 21 6 478 1 474 6.08e-16 81.3
Msa0506010 AT4G39500.1 24.809 262 179 6 245 498 185 436 6.24e-16 80.9
Msa0506010 AT1G01600.1 21.712 479 324 18 30 478 6 463 1.16e-14 77.0
Msa0506010 AT5G63450.1 26.971 241 159 7 263 497 242 471 1.29e-14 77.0
Msa0506010 AT5G63450.2 26.971 241 159 7 263 497 300 529 1.63e-14 76.6
Msa0506010 AT1G73340.1 21.095 493 333 17 15 500 11 454 5.56e-14 74.7
Msa0506010 AT2G44890.1 25.564 266 172 9 263 512 236 491 8.16e-14 74.3
Msa0506010 AT3G48520.1 25.726 241 163 7 263 498 240 469 1.20e-13 73.9
Msa0506010 AT3G53305.1 36.090 133 76 3 377 509 183 306 1.44e-13 72.4
Msa0506010 AT3G53130.1 24.017 229 159 5 282 506 300 517 2.15e-13 73.2
Msa0506010 AT2G45560.2 21.070 299 216 9 18 311 7 290 8.70e-13 70.1
Msa0506010 AT2G32440.2 22.244 499 312 17 46 531 40 475 9.51e-13 70.9
Msa0506010 AT2G32440.1 22.244 499 312 17 46 531 40 475 9.51e-13 70.9
Msa0506010 AT1G57750.2 26.667 195 134 3 263 454 236 424 1.50e-12 70.1
Msa0506010 AT2G23180.1 22.984 248 177 5 263 498 237 482 3.54e-11 66.2

Find 141 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTTGTTGGCATCTTTA+AGG 0.170719 3_4:+52212542 None:intergenic
GGTTTATTTGCAAGCATTTC+AGG 0.188028 3_4:+52213279 None:intergenic
AGAGCTTCATTCCAAACTTT+TGG 0.234905 3_4:+52211976 None:intergenic
CTCAACAAAGTGGTATCTTA+TGG 0.251490 3_4:+52213362 None:intergenic
GCATCAGCTGTTACACCCTT+TGG 0.271072 3_4:-52213066 Msa0506010:CDS
GATTATATGCCATTCTTTAG+AGG 0.276386 3_4:-52212718 Msa0506010:CDS
TCAATTCTCTTCTCAATGAT+TGG 0.286477 3_4:+52212628 None:intergenic
TTGCAATTTGATGAGGAAAT+TGG 0.287149 3_4:-52212860 Msa0506010:CDS
TATCATCAGCAAAGGTTTCT+TGG 0.295206 3_4:-52213088 Msa0506010:CDS
ATAACTACATGACTACCTTT+TGG 0.296291 3_4:+52212024 None:intergenic
CATCAGCTGTTACACCCTTT+GGG 0.297203 3_4:-52213065 Msa0506010:CDS
TGATGGGTCTATGGTAGTTT+TGG 0.308095 3_4:-52211923 Msa0506010:CDS
GGTTTGGAATATCCGATTCT+TGG 0.309769 3_4:+52212157 None:intergenic
TGTGGTTCCAAGCACAATTC+CGG 0.310189 3_4:+52211849 None:intergenic
ATTTCCTCTAATGTCAATAA+TGG 0.319407 3_4:+52212520 None:intergenic
TTATGTATCCACCTAGTTGC+AGG 0.321764 3_4:+52213258 None:intergenic
ATAAACATATTTGATGTATT+CGG 0.322630 3_4:-52211502 Msa0506010:three_prime_UTR
CAAACCATTATTGACATTAG+AGG 0.328014 3_4:-52212524 Msa0506010:CDS
ATTGACATTAGAGGAAATAA+AGG 0.340557 3_4:-52212515 Msa0506010:CDS
TAATCTTATATAACGGTGTT+TGG 0.355918 3_4:-52211628 Msa0506010:three_prime_UTR
AGTTCAATGGTTGATGCATT+AGG 0.356955 3_4:+52211772 None:intergenic
GTGCTCCATTGTTTAGTAAT+GGG 0.360583 3_4:-52211538 Msa0506010:three_prime_UTR
CAAGCTATGAGCTACACTTC+TGG 0.360708 3_4:-52213459 Msa0506010:CDS
TATAATTCTGATGCCAATCT+TGG 0.362454 3_4:+52211691 None:intergenic
ATAACGGTGTTTGGTTAGTA+AGG 0.362672 3_4:-52211619 Msa0506010:three_prime_UTR
TTTGTTGTTGGCATCTTTAA+GGG 0.368353 3_4:+52212543 None:intergenic
TCAACGAGCCACTGAAGAAT+TGG 0.369263 3_4:-52212208 Msa0506010:CDS
TTTGGGACCGGGTGGTAGTT+TGG 0.372123 3_4:+52213326 None:intergenic
GCTTTCACATAGTTGAGGTT+TGG 0.373818 3_4:+52212141 None:intergenic
TTTAGAGGACTTGACTTTGA+TGG 0.381667 3_4:-52212703 Msa0506010:CDS
GTGGTTCCAAGCACAATTCC+GGG 0.391398 3_4:+52211850 None:intergenic
TCGGACGAAATCCAAAAGTT+TGG 0.392283 3_4:-52211987 Msa0506010:CDS
GCAATGGTGGGACAGGTAAC+AGG 0.392862 3_4:+52213174 None:intergenic
GAATGATGGTGGTCCTGGTT+TGG 0.404766 3_4:-52212806 Msa0506010:CDS
CATTCTTTCTCAAGAATTCA+AGG 0.405169 3_4:+52213151 None:intergenic
ACAATGACTGTGATGTTATT+AGG 0.406786 3_4:-52211829 Msa0506010:CDS
AATGATATGAACTTCAAATC+TGG 0.414952 3_4:+52211895 None:intergenic
ACCAACTATAGGCCATGGTT+TGG 0.419820 3_4:+52213308 None:intergenic
ATATCAGTGGACATGGATAT+TGG 0.427913 3_4:+52213108 None:intergenic
GTGGCTCGTTGAAGTAAATC+TGG 0.435855 3_4:+52212219 None:intergenic
TCAGGAATATTACCAACTAT+AGG 0.437997 3_4:+52213297 None:intergenic
GGAATACTTGAGAAGTTCAA+TGG 0.443660 3_4:+52211759 None:intergenic
TCTCCCCTCACAGGCATCAA+TGG 0.445819 3_4:-52212999 Msa0506010:CDS
CCAACTATAGGCCATGGTTT+GGG 0.447196 3_4:+52213309 None:intergenic
TTCTTGCAGGAACTTGTGTT+AGG 0.448000 3_4:-52212300 Msa0506010:intron
GAAGTTCATATCATTTAGTA+CGG 0.448426 3_4:-52211887 Msa0506010:CDS
GCCAATTACATGATTCCAAA+AGG 0.452440 3_4:-52212039 Msa0506010:CDS
TTCAAGGGCAATGGTGGGAC+AGG 0.456375 3_4:+52213167 None:intergenic
AGTGCTCCATTGTTTAGTAA+TGG 0.468887 3_4:-52211539 Msa0506010:three_prime_UTR
GGCAATAGCAAAGCCAAGAT+TGG 0.469898 3_4:-52211704 Msa0506010:CDS
GGAAGGAATGATGGTGGTCC+TGG 0.472453 3_4:-52212811 Msa0506010:CDS
ATTGCCACTAGTGGCCCTCC+AGG 0.474108 3_4:+52211721 None:intergenic
GGCTTTGCTATTGCCACTAG+TGG 0.478391 3_4:+52211712 None:intergenic
ATCAATGGCTCGCAAACAAA+AGG 0.481322 3_4:-52212984 Msa0506010:CDS
TGTCAATAATGGTTTGTTGT+TGG 0.482329 3_4:+52212531 None:intergenic
ATAGGCCATGGTTTGGGACC+GGG 0.485668 3_4:+52213315 None:intergenic
GGAAAATGAATCAGTAAAGA+TGG 0.489831 3_4:-52211597 Msa0506010:three_prime_UTR
GGTTGTCCCGGAATTGTGCT+TGG 0.489912 3_4:-52211856 Msa0506010:CDS
CAGAAGTGTAGCTCATAGCT+TGG 0.490205 3_4:+52213460 None:intergenic
ACGGGAAGGCGTGGTTGTCC+CGG 0.492272 3_4:-52211868 Msa0506010:CDS
TAGGTGGATACATAAGATAA+TGG 0.492830 3_4:-52213250 Msa0506010:CDS
TAATCCTCCCCATGTTGCTA+TGG 0.499736 3_4:-52212076 Msa0506010:CDS
AATTAATATGCAAGGTTCAA+AGG 0.500582 3_4:+52213499 None:intergenic
TCCAATGGTGATAGATACCC+TGG 0.502264 3_4:-52211739 Msa0506010:CDS
AATAGAAGGTACTTTGGAGA+AGG 0.502612 3_4:-52212832 Msa0506010:CDS
TATAGGCCATGGTTTGGGAC+CGG 0.511486 3_4:+52213314 None:intergenic
AAGTCAAGTCCTCTAAAGAA+TGG 0.511797 3_4:+52212709 None:intergenic
CGCTACTCTCTCAGTCGTTT+AGG 0.513167 3_4:-52213428 Msa0506010:CDS
CAAGAATTCAAGGGCAATGG+TGG 0.514918 3_4:+52213161 None:intergenic
GAAGGTACTTTGGAGAAGGA+AGG 0.516267 3_4:-52212828 Msa0506010:CDS
GGTTGCTCCATGGATTCGAT+TGG 0.516658 3_4:-52211804 Msa0506010:CDS
CTTTGATGGTCATGAGAGAA+AGG 0.517624 3_4:-52212689 Msa0506010:CDS
TTTGAGAAAATTAATATGCA+AGG 0.518387 3_4:+52213491 None:intergenic
TCCAGGGTATCTATCACCAT+TGG 0.521137 3_4:+52211738 None:intergenic
CATATAATCAGAAACACAAA+AGG 0.526650 3_4:+52212732 None:intergenic
ATGAATTGTTCTCCCCTCAC+AGG 0.526665 3_4:-52213008 Msa0506010:CDS
CCCAAACCATGGCCTATAGT+TGG 0.526778 3_4:-52213309 Msa0506010:CDS
TTGCAGGAACTTGTGTTAGG+TGG 0.527469 3_4:-52212297 Msa0506010:intron
ACAACGACTAGTCCAAGAAT+CGG 0.530665 3_4:-52212169 Msa0506010:CDS
GACCACTCCAATCGAATCCA+TGG 0.540359 3_4:+52211797 None:intergenic
CACAAGCTTTCACATAGTTG+AGG 0.544057 3_4:+52212136 None:intergenic
TTTGGAGAAGGAAGGAATGA+TGG 0.549641 3_4:-52212820 Msa0506010:CDS
GAATAACATGGACATTTCCT+AGG 0.550006 3_4:+52213196 None:intergenic
CGAGCCATTGATGCCTGTGA+GGG 0.551166 3_4:+52212995 None:intergenic
ATTCTTTCTCAAGAATTCAA+GGG 0.552537 3_4:+52213152 None:intergenic
ATTATTGTTGCAATTTGATG+AGG 0.553985 3_4:-52212867 Msa0506010:CDS
TCTCAAGAATTCAAGGGCAA+TGG 0.555312 3_4:+52213158 None:intergenic
TTGCAAATAAACCTGCAACT+AGG 0.558715 3_4:-52213269 Msa0506010:CDS
TGGTCATGAGAGAAAGGTGA+AGG 0.559184 3_4:-52212683 Msa0506010:CDS
CATGTAGTTATAAGCAAACA+AGG 0.559435 3_4:-52212012 Msa0506010:CDS
TTACACCCTTTGGGGAACAA+TGG 0.561271 3_4:-52213056 Msa0506010:CDS
ATGCAGATAATCTTATATAA+CGG 0.561452 3_4:-52211635 Msa0506010:three_prime_UTR
GAACTTCTCAAGTATTCCAA+TGG 0.568654 3_4:-52211754 Msa0506010:CDS
ATCAGCTGTTACACCCTTTG+GGG 0.569284 3_4:-52213064 Msa0506010:CDS
AAGTTCATATCATTTAGTAC+GGG 0.569361 3_4:-52211886 Msa0506010:CDS
GAAGAATTGGATAGTATCGT+AGG 0.569366 3_4:-52212195 Msa0506010:CDS
TAACGGTGTTTGGTTAGTAA+GGG 0.570619 3_4:-52211618 Msa0506010:three_prime_UTR
CTCCATGGATTCGATTGGAG+TGG 0.571296 3_4:-52211799 Msa0506010:CDS
TTATTAGGCAGGTTGCTCCA+TGG 0.571812 3_4:-52211814 Msa0506010:CDS
GCAAATTCAGCTGCATGTGA+TGG 0.572339 3_4:+52212264 None:intergenic
TATGTTGTCCATAGCAACAT+GGG 0.572732 3_4:+52212068 None:intergenic
ATATTACCAACTATAGGCCA+TGG 0.576767 3_4:+52213303 None:intergenic
CAACTCCCATTACTAAACAA+TGG 0.577045 3_4:+52211533 None:intergenic
TGATGGTGGTCCTGGTTTGG+AGG 0.582506 3_4:-52212803 Msa0506010:CDS
TGACTGTGATGTTATTAGGC+AGG 0.588410 3_4:-52211825 Msa0506010:CDS
GAAGGAGGCTATGAGTATTG+TGG 0.590435 3_4:-52212665 Msa0506010:CDS
TAATAACATCACAGTCATTG+TGG 0.592237 3_4:+52211831 None:intergenic
TCATATCATTTAGTACGGGA+AGG 0.593898 3_4:-52211882 Msa0506010:CDS
GAAATAGCGTGTATCCGCCT+AGG 0.594219 3_4:-52213213 Msa0506010:CDS
AAAGACTAGTGCTGATGCTG+AGG 0.599150 3_4:-52212587 Msa0506010:CDS
TCCACTGATATCATCAGCAA+AGG 0.601701 3_4:-52213096 Msa0506010:CDS
GGAACTTGTGTTAGGTGGAG+TGG 0.601887 3_4:-52212292 Msa0506010:CDS
TCAATGGTTGATGCATTAGG+AGG 0.603222 3_4:+52211775 None:intergenic
TGAATGTTAAGATTGTTACA+AGG 0.605730 3_4:-52212891 Msa0506010:CDS
CTATGTTGTCCATAGCAACA+TGG 0.606310 3_4:+52212067 None:intergenic
TGTTCAACTTCCTCCAAACC+AGG 0.606312 3_4:+52212793 None:intergenic
TCATTTAGTACGGGAAGGCG+TGG 0.607824 3_4:-52211877 Msa0506010:CDS
GATACTATCCAATTCTTCAG+TGG 0.608456 3_4:+52212200 None:intergenic
TTGCCACTAGTGGCCCTCCA+GGG 0.609613 3_4:+52211722 None:intergenic
GCTCGCAAACAAAAGGAATG+AGG 0.613585 3_4:-52212977 Msa0506010:CDS
TGTTGCTATGGACAACATAG+TGG 0.613681 3_4:-52212064 Msa0506010:CDS
CAAATAAACCTGCAACTAGG+TGG 0.622519 3_4:-52213266 Msa0506010:CDS
TACCACCCGGTCCCAAACCA+TGG 0.625239 3_4:-52213320 Msa0506010:CDS
ACCTTTGCTGATGATATCAG+TGG 0.632000 3_4:+52213095 None:intergenic
GCGAGCCATTGATGCCTGTG+AGG 0.633714 3_4:+52212994 None:intergenic
ATACCCTGGAGGGCCACTAG+TGG 0.635007 3_4:-52211725 Msa0506010:CDS
GCTGATGATATCAGTGGACA+TGG 0.636477 3_4:+52213101 None:intergenic
AAGAATTCAAGGGCAATGGT+GGG 0.637514 3_4:+52213162 None:intergenic
GGCCATGGTTTGGGACCGGG+TGG 0.649131 3_4:+52213318 None:intergenic
ATGGTGATAGATACCCTGGA+GGG 0.650089 3_4:-52211735 Msa0506010:CDS
GACAGGTAACAGGAATAACA+TGG 0.653652 3_4:+52213184 None:intergenic
TTGTCCATAGCAACATGGGG+AGG 0.672081 3_4:+52212072 None:intergenic
GTTATAAGCAAACAAGGACT+CGG 0.672869 3_4:-52212006 Msa0506010:CDS
TCATGAGAGAAAGGTGAAGG+AGG 0.683193 3_4:-52212680 Msa0506010:CDS
GGAGAAGGAAGGAATGATGG+TGG 0.694029 3_4:-52212817 Msa0506010:CDS
ACGACTGAGAGAGTAGCGGT+AGG 0.696421 3_4:+52213433 None:intergenic
ATGTTGTCCATAGCAACATG+GGG 0.713647 3_4:+52212069 None:intergenic
GAGCCATTGATGCCTGTGAG+GGG 0.718073 3_4:+52212996 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.719369 3_4:+52213199 None:intergenic
AATGGTGATAGATACCCTGG+AGG 0.740316 3_4:-52211736 Msa0506010:CDS
CTAAACGACTGAGAGAGTAG+CGG 0.745832 3_4:+52213429 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTTAAAATTCTTGC+AGG - chr3_4:52212710-52212729 Msa0506010:CDS 15.0%
!! ATAAACATATTTGATGTATT+CGG - chr3_4:52213521-52213540 Msa0506010:five_prime_UTR 15.0%
!!! TTAAAATTTAAAATTCTTGC+AGG - chr3_4:52212710-52212729 Msa0506010:CDS 15.0%
!! ATAAACATATTTGATGTATT+CGG - chr3_4:52213521-52213540 Msa0506010:five_prime_UTR 15.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_4:52211508-52211527 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_4:52211535-52211554 None:intergenic 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_4:52212929-52212948 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_4:52213388-52213407 Msa0506010:CDS 20.0%
!!! AAGGAACAATAATTTTTAAG+TGG + chr3_4:52211508-52211527 None:intergenic 20.0%
!! TTTGAGAAAATTAATATGCA+AGG + chr3_4:52211535-52211554 None:intergenic 20.0%
!! TAAAAATTGTAATTGGATGA+AGG + chr3_4:52212929-52212948 None:intergenic 20.0%
!! ATGCAGATAATCTTATATAA+CGG - chr3_4:52213388-52213407 Msa0506010:CDS 20.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_4:52211527-52211546 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_4:52211874-52211893 None:intergenic 25.0%
! TGAATGTTAAGATTGTTACA+AGG - chr3_4:52212132-52212151 Msa0506010:CDS 25.0%
! ATTATTGTTGCAATTTGATG+AGG - chr3_4:52212156-52212175 Msa0506010:CDS 25.0%
!!! GGAAATTGGTTTTTAATAGA+AGG - chr3_4:52212177-52212196 Msa0506010:CDS 25.0%
!!! GTTTTTAATAGAAGGTACTT+TGG - chr3_4:52212185-52212204 Msa0506010:CDS 25.0%
! CATATAATCAGAAACACAAA+AGG + chr3_4:52212294-52212313 None:intergenic 25.0%
! TTGAGAAGAGAATTGAAAAA+TGG - chr3_4:52212402-52212421 Msa0506010:intron 25.0%
! ATTTCCTCTAATGTCAATAA+TGG + chr3_4:52212506-52212525 None:intergenic 25.0%
! ATTGACATTAGAGGAAATAA+AGG - chr3_4:52212508-52212527 Msa0506010:CDS 25.0%
!! TTCTAGGAGTAAATTTCATT+CGG + chr3_4:52212655-52212674 None:intergenic 25.0%
! TTGATGCTACAATAATTTCT+AGG + chr3_4:52212671-52212690 None:intergenic 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_4:52212936-52212955 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_4:52213131-52213150 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_4:52213136-52213155 Msa0506010:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_4:52213137-52213156 Msa0506010:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_4:52213395-52213414 Msa0506010:CDS 25.0%
! AATTAATATGCAAGGTTCAA+AGG + chr3_4:52211527-52211546 None:intergenic 25.0%
! ATTCTTTCTCAAGAATTCAA+GGG + chr3_4:52211874-52211893 None:intergenic 25.0%
! TGAATGTTAAGATTGTTACA+AGG - chr3_4:52212132-52212151 Msa0506010:CDS 25.0%
! ATTATTGTTGCAATTTGATG+AGG - chr3_4:52212156-52212175 Msa0506010:CDS 25.0%
!!! GGAAATTGGTTTTTAATAGA+AGG - chr3_4:52212177-52212196 Msa0506010:CDS 25.0%
!!! GTTTTTAATAGAAGGTACTT+TGG - chr3_4:52212185-52212204 Msa0506010:CDS 25.0%
! CATATAATCAGAAACACAAA+AGG + chr3_4:52212294-52212313 None:intergenic 25.0%
! TTGAGAAGAGAATTGAAAAA+TGG - chr3_4:52212402-52212421 Msa0506010:intron 25.0%
! ATTTCCTCTAATGTCAATAA+TGG + chr3_4:52212506-52212525 None:intergenic 25.0%
! ATTGACATTAGAGGAAATAA+AGG - chr3_4:52212508-52212527 Msa0506010:CDS 25.0%
!! TTCTAGGAGTAAATTTCATT+CGG + chr3_4:52212655-52212674 None:intergenic 25.0%
! TTGATGCTACAATAATTTCT+AGG + chr3_4:52212671-52212690 None:intergenic 25.0%
! GGAGGATTAAAAATTGTAAT+TGG + chr3_4:52212936-52212955 None:intergenic 25.0%
! AATGATATGAACTTCAAATC+TGG + chr3_4:52213131-52213150 None:intergenic 25.0%
! GAAGTTCATATCATTTAGTA+CGG - chr3_4:52213136-52213155 Msa0506010:CDS 25.0%
! AAGTTCATATCATTTAGTAC+GGG - chr3_4:52213137-52213156 Msa0506010:CDS 25.0%
! TAATCTTATATAACGGTGTT+TGG - chr3_4:52213395-52213414 Msa0506010:CDS 25.0%
TCAGGAATATTACCAACTAT+AGG + chr3_4:52211729-52211748 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_4:52211773-52211792 Msa0506010:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_4:52211875-52211894 None:intergenic 30.0%
TGCAAAAATGCAAACGATAA+TGG - chr3_4:52212104-52212123 Msa0506010:CDS 30.0%
TTGCAATTTGATGAGGAAAT+TGG - chr3_4:52212163-52212182 Msa0506010:CDS 30.0%
GATTATATGCCATTCTTTAG+AGG - chr3_4:52212305-52212324 Msa0506010:intron 30.0%
TCAATTCTCTTCTCAATGAT+TGG + chr3_4:52212398-52212417 None:intergenic 30.0%
!! TTTGTTGTTGGCATCTTTAA+GGG + chr3_4:52212483-52212502 None:intergenic 30.0%
!! TGTCAATAATGGTTTGTTGT+TGG + chr3_4:52212495-52212514 None:intergenic 30.0%
CAAACCATTATTGACATTAG+AGG - chr3_4:52212499-52212518 Msa0506010:intron 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_4:52212988-52213007 None:intergenic 30.0%
! ATAACTACATGACTACCTTT+TGG + chr3_4:52213002-52213021 None:intergenic 30.0%
CATGTAGTTATAAGCAAACA+AGG - chr3_4:52213011-52213030 Msa0506010:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_4:52213084-52213103 Msa0506010:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_4:52213091-52213110 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_4:52213091-52213110 Msa0506010:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_4:52213195-52213214 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_4:52213194-52213213 Msa0506010:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_4:52213335-52213354 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_4:52213426-52213445 Msa0506010:CDS 30.0%
TCAGGAATATTACCAACTAT+AGG + chr3_4:52211729-52211748 None:intergenic 30.0%
TAGGTGGATACATAAGATAA+TGG - chr3_4:52211773-52211792 Msa0506010:CDS 30.0%
CATTCTTTCTCAAGAATTCA+AGG + chr3_4:52211875-52211894 None:intergenic 30.0%
TGCAAAAATGCAAACGATAA+TGG - chr3_4:52212104-52212123 Msa0506010:CDS 30.0%
TTGCAATTTGATGAGGAAAT+TGG - chr3_4:52212163-52212182 Msa0506010:CDS 30.0%
GATTATATGCCATTCTTTAG+AGG - chr3_4:52212305-52212324 Msa0506010:intron 30.0%
TCAATTCTCTTCTCAATGAT+TGG + chr3_4:52212398-52212417 None:intergenic 30.0%
!! TTTGTTGTTGGCATCTTTAA+GGG + chr3_4:52212483-52212502 None:intergenic 30.0%
!! TGTCAATAATGGTTTGTTGT+TGG + chr3_4:52212495-52212514 None:intergenic 30.0%
CAAACCATTATTGACATTAG+AGG - chr3_4:52212499-52212518 Msa0506010:intron 30.0%
!!! ACCTTTTGGAATCATGTAAT+TGG + chr3_4:52212988-52213007 None:intergenic 30.0%
! ATAACTACATGACTACCTTT+TGG + chr3_4:52213002-52213021 None:intergenic 30.0%
CATGTAGTTATAAGCAAACA+AGG - chr3_4:52213011-52213030 Msa0506010:CDS 30.0%
AACGCCATCTAAAAAATGAT+GGG - chr3_4:52213084-52213103 Msa0506010:CDS 30.0%
!!! TAGACCCATCATTTTTTAGA+TGG + chr3_4:52213091-52213110 None:intergenic 30.0%
!! TCTAAAAAATGATGGGTCTA+TGG - chr3_4:52213091-52213110 Msa0506010:CDS 30.0%
TAATAACATCACAGTCATTG+TGG + chr3_4:52213195-52213214 None:intergenic 30.0%
ACAATGACTGTGATGTTATT+AGG - chr3_4:52213194-52213213 Msa0506010:CDS 30.0%
TATAATTCTGATGCCAATCT+TGG + chr3_4:52213335-52213354 None:intergenic 30.0%
GGAAAATGAATCAGTAAAGA+TGG - chr3_4:52213426-52213445 Msa0506010:CDS 30.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_4:52211664-52211683 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_4:52211674-52211693 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_4:52211689-52211708 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_4:52211723-52211742 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_4:52211747-52211766 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_4:52211754-52211773 Msa0506010:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_4:52211830-52211849 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_4:52211918-52211937 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_4:52211935-52211954 Msa0506010:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_4:52211975-52211994 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_4:52211976-52211995 None:intergenic 35.0%
!! AATAGAAGGTACTTTGGAGA+AGG - chr3_4:52212191-52212210 Msa0506010:CDS 35.0%
! AAGTCAAGTCCTCTAAAGAA+TGG + chr3_4:52212317-52212336 None:intergenic 35.0%
TTTAGAGGACTTGACTTTGA+TGG - chr3_4:52212320-52212339 Msa0506010:intron 35.0%
!! GTTTGTTGTTGGCATCTTTA+AGG + chr3_4:52212484-52212503 None:intergenic 35.0%
GATACTATCCAATTCTTCAG+TGG + chr3_4:52212826-52212845 None:intergenic 35.0%
GAAGAATTGGATAGTATCGT+AGG - chr3_4:52212828-52212847 Msa0506010:CDS 35.0%
TATGTTGTCCATAGCAACAT+GGG + chr3_4:52212958-52212977 None:intergenic 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_4:52212984-52213003 Msa0506010:CDS 35.0%
GTTATAAGCAAACAAGGACT+CGG - chr3_4:52213017-52213036 Msa0506010:CDS 35.0%
! AGAGCTTCATTCCAAACTTT+TGG + chr3_4:52213050-52213069 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_4:52213083-52213102 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_4:52213083-52213102 Msa0506010:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_4:52213141-52213160 Msa0506010:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_4:52213254-52213273 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_4:52213267-52213286 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_4:52213269-52213288 Msa0506010:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_4:52213404-52213423 Msa0506010:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_4:52213405-52213424 Msa0506010:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_4:52213484-52213503 Msa0506010:exon 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_4:52213485-52213504 Msa0506010:exon 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_4:52213493-52213512 None:intergenic 35.0%
CTCAACAAAGTGGTATCTTA+TGG + chr3_4:52211664-52211683 None:intergenic 35.0%
!!! TTTTAGGGTTCTCAACAAAG+TGG + chr3_4:52211674-52211693 None:intergenic 35.0%
!!! GTGGTAGTTTGGCTTTTTTA+GGG + chr3_4:52211689-52211708 None:intergenic 35.0%
ATATTACCAACTATAGGCCA+TGG + chr3_4:52211723-52211742 None:intergenic 35.0%
GGTTTATTTGCAAGCATTTC+AGG + chr3_4:52211747-52211766 None:intergenic 35.0%
TTGCAAATAAACCTGCAACT+AGG - chr3_4:52211754-52211773 Msa0506010:CDS 35.0%
GAATAACATGGACATTTCCT+AGG + chr3_4:52211830-52211849 None:intergenic 35.0%
ATATCAGTGGACATGGATAT+TGG + chr3_4:52211918-52211937 None:intergenic 35.0%
TATCATCAGCAAAGGTTTCT+TGG - chr3_4:52211935-52211954 Msa0506010:CDS 35.0%
! TTTTTCCATTGTTCCCCAAA+GGG + chr3_4:52211975-52211994 None:intergenic 35.0%
!!! TTTTTTCCATTGTTCCCCAA+AGG + chr3_4:52211976-52211995 None:intergenic 35.0%
!! AATAGAAGGTACTTTGGAGA+AGG - chr3_4:52212191-52212210 Msa0506010:CDS 35.0%
! AAGTCAAGTCCTCTAAAGAA+TGG + chr3_4:52212317-52212336 None:intergenic 35.0%
TTTAGAGGACTTGACTTTGA+TGG - chr3_4:52212320-52212339 Msa0506010:intron 35.0%
!! GTTTGTTGTTGGCATCTTTA+AGG + chr3_4:52212484-52212503 None:intergenic 35.0%
GATACTATCCAATTCTTCAG+TGG + chr3_4:52212826-52212845 None:intergenic 35.0%
GAAGAATTGGATAGTATCGT+AGG - chr3_4:52212828-52212847 Msa0506010:CDS 35.0%
TATGTTGTCCATAGCAACAT+GGG + chr3_4:52212958-52212977 None:intergenic 35.0%
GCCAATTACATGATTCCAAA+AGG - chr3_4:52212984-52213003 Msa0506010:CDS 35.0%
GTTATAAGCAAACAAGGACT+CGG - chr3_4:52213017-52213036 Msa0506010:CDS 35.0%
! AGAGCTTCATTCCAAACTTT+TGG + chr3_4:52213050-52213069 None:intergenic 35.0%
!!! TCATTTTTTAGATGGCGTTC+TGG + chr3_4:52213083-52213102 None:intergenic 35.0%
GAACGCCATCTAAAAAATGA+TGG - chr3_4:52213083-52213102 Msa0506010:CDS 35.0%
TCATATCATTTAGTACGGGA+AGG - chr3_4:52213141-52213160 Msa0506010:CDS 35.0%
! AGTTCAATGGTTGATGCATT+AGG + chr3_4:52213254-52213273 None:intergenic 35.0%
GGAATACTTGAGAAGTTCAA+TGG + chr3_4:52213267-52213286 None:intergenic 35.0%
GAACTTCTCAAGTATTCCAA+TGG - chr3_4:52213269-52213288 Msa0506010:CDS 35.0%
ATAACGGTGTTTGGTTAGTA+AGG - chr3_4:52213404-52213423 Msa0506010:CDS 35.0%
TAACGGTGTTTGGTTAGTAA+GGG - chr3_4:52213405-52213424 Msa0506010:CDS 35.0%
AGTGCTCCATTGTTTAGTAA+TGG - chr3_4:52213484-52213503 Msa0506010:exon 35.0%
GTGCTCCATTGTTTAGTAAT+GGG - chr3_4:52213485-52213504 Msa0506010:exon 35.0%
CAACTCCCATTACTAAACAA+TGG + chr3_4:52213493-52213512 None:intergenic 35.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_4:52211690-52211709 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_4:52211690-52211709 Msa0506010:CDS 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_4:52211757-52211776 Msa0506010:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_4:52211768-52211787 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_4:52211827-52211846 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_4:52211842-52211861 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_4:52211864-52211883 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_4:52211868-52211887 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_4:52211927-52211946 Msa0506010:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_4:52211931-52211950 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_4:52212039-52212058 Msa0506010:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_4:52212203-52212222 Msa0506010:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_4:52212334-52212353 Msa0506010:intron 40.0%
TTCTTGCAGGAACTTGTGTT+AGG - chr3_4:52212723-52212742 Msa0506010:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_4:52212854-52212873 Msa0506010:CDS 40.0%
! GGTTTGGAATATCCGATTCT+TGG + chr3_4:52212869-52212888 None:intergenic 40.0%
GCTTTCACATAGTTGAGGTT+TGG + chr3_4:52212885-52212904 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_4:52212890-52212909 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+GGG + chr3_4:52212957-52212976 None:intergenic 40.0%
CTATGTTGTCCATAGCAACA+TGG + chr3_4:52212959-52212978 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_4:52212959-52212978 Msa0506010:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_4:52213036-52213055 Msa0506010:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_4:52213100-52213119 Msa0506010:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_4:52213198-52213217 Msa0506010:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_4:52213251-52213270 None:intergenic 40.0%
!!! GGTGGTAGTTTGGCTTTTTT+AGG + chr3_4:52211690-52211709 None:intergenic 40.0%
AAAAAAGCCAAACTACCACC+CGG - chr3_4:52211690-52211709 Msa0506010:CDS 40.0%
CAAATAAACCTGCAACTAGG+TGG - chr3_4:52211757-52211776 Msa0506010:CDS 40.0%
TTATGTATCCACCTAGTTGC+AGG + chr3_4:52211768-52211787 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG + chr3_4:52211827-52211846 None:intergenic 40.0%
GACAGGTAACAGGAATAACA+TGG + chr3_4:52211842-52211861 None:intergenic 40.0%
AAGAATTCAAGGGCAATGGT+GGG + chr3_4:52211864-52211883 None:intergenic 40.0%
TCTCAAGAATTCAAGGGCAA+TGG + chr3_4:52211868-52211887 None:intergenic 40.0%
TCCACTGATATCATCAGCAA+AGG - chr3_4:52211927-52211946 Msa0506010:CDS 40.0%
ACCTTTGCTGATGATATCAG+TGG + chr3_4:52211931-52211950 None:intergenic 40.0%
ATCAATGGCTCGCAAACAAA+AGG - chr3_4:52212039-52212058 Msa0506010:CDS 40.0%
TTTGGAGAAGGAAGGAATGA+TGG - chr3_4:52212203-52212222 Msa0506010:CDS 40.0%
! CTTTGATGGTCATGAGAGAA+AGG - chr3_4:52212334-52212353 Msa0506010:intron 40.0%
TTCTTGCAGGAACTTGTGTT+AGG - chr3_4:52212723-52212742 Msa0506010:CDS 40.0%
! ACAACGACTAGTCCAAGAAT+CGG - chr3_4:52212854-52212873 Msa0506010:CDS 40.0%
! GGTTTGGAATATCCGATTCT+TGG + chr3_4:52212869-52212888 None:intergenic 40.0%
GCTTTCACATAGTTGAGGTT+TGG + chr3_4:52212885-52212904 None:intergenic 40.0%
CACAAGCTTTCACATAGTTG+AGG + chr3_4:52212890-52212909 None:intergenic 40.0%
ATGTTGTCCATAGCAACATG+GGG + chr3_4:52212957-52212976 None:intergenic 40.0%
CTATGTTGTCCATAGCAACA+TGG + chr3_4:52212959-52212978 None:intergenic 40.0%
TGTTGCTATGGACAACATAG+TGG - chr3_4:52212959-52212978 Msa0506010:CDS 40.0%
TCGGACGAAATCCAAAAGTT+TGG - chr3_4:52213036-52213055 Msa0506010:CDS 40.0%
!! TGATGGGTCTATGGTAGTTT+TGG - chr3_4:52213100-52213119 Msa0506010:CDS 40.0%
TGACTGTGATGTTATTAGGC+AGG - chr3_4:52213198-52213217 Msa0506010:CDS 40.0%
! TCAATGGTTGATGCATTAGG+AGG + chr3_4:52213251-52213270 None:intergenic 40.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_4:52211566-52211585 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_4:52211564-52211583 Msa0506010:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_4:52211597-52211616 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_4:52211717-52211736 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_4:52211718-52211737 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_4:52211865-52211884 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_4:52211925-52211944 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_4:52211958-52211977 Msa0506010:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_4:52211959-52211978 Msa0506010:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_4:52211967-52211986 Msa0506010:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_4:52212015-52212034 Msa0506010:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_4:52212046-52212065 Msa0506010:CDS 45.0%
!! GAAGGTACTTTGGAGAAGGA+AGG - chr3_4:52212195-52212214 Msa0506010:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_4:52212233-52212252 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_4:52212340-52212359 Msa0506010:intron 45.0%
TCATGAGAGAAAGGTGAAGG+AGG - chr3_4:52212343-52212362 Msa0506010:intron 45.0%
! GAAGGAGGCTATGAGTATTG+TGG - chr3_4:52212358-52212377 Msa0506010:intron 45.0%
!! AAAGACTAGTGCTGATGCTG+AGG - chr3_4:52212436-52212455 Msa0506010:intron 45.0%
TTGCAGGAACTTGTGTTAGG+TGG - chr3_4:52212726-52212745 Msa0506010:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_4:52212762-52212781 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_4:52212807-52212826 None:intergenic 45.0%
TCAACGAGCCACTGAAGAAT+TGG - chr3_4:52212815-52212834 Msa0506010:CDS 45.0%
TAATCCTCCCCATGTTGCTA+TGG - chr3_4:52212947-52212966 Msa0506010:CDS 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_4:52213177-52213196 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_4:52213209-52213228 Msa0506010:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_4:52213284-52213303 Msa0506010:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_4:52213288-52213307 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_4:52213287-52213306 Msa0506010:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_4:52213288-52213307 Msa0506010:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_4:52213319-52213338 Msa0506010:CDS 45.0%
! CAGAAGTGTAGCTCATAGCT+TGG + chr3_4:52211566-52211585 None:intergenic 45.0%
CAAGCTATGAGCTACACTTC+TGG - chr3_4:52211564-52211583 Msa0506010:three_prime_UTR 45.0%
CTAAACGACTGAGAGAGTAG+CGG + chr3_4:52211597-52211616 None:intergenic 45.0%
CCAACTATAGGCCATGGTTT+GGG + chr3_4:52211717-52211736 None:intergenic 45.0%
ACCAACTATAGGCCATGGTT+TGG + chr3_4:52211718-52211737 None:intergenic 45.0%
CAAGAATTCAAGGGCAATGG+TGG + chr3_4:52211865-52211884 None:intergenic 45.0%
GCTGATGATATCAGTGGACA+TGG + chr3_4:52211925-52211944 None:intergenic 45.0%
CATCAGCTGTTACACCCTTT+GGG - chr3_4:52211958-52211977 Msa0506010:CDS 45.0%
ATCAGCTGTTACACCCTTTG+GGG - chr3_4:52211959-52211978 Msa0506010:CDS 45.0%
! TTACACCCTTTGGGGAACAA+TGG - chr3_4:52211967-52211986 Msa0506010:CDS 45.0%
ATGAATTGTTCTCCCCTCAC+AGG - chr3_4:52212015-52212034 Msa0506010:CDS 45.0%
GCTCGCAAACAAAAGGAATG+AGG - chr3_4:52212046-52212065 Msa0506010:CDS 45.0%
!! GAAGGTACTTTGGAGAAGGA+AGG - chr3_4:52212195-52212214 Msa0506010:CDS 45.0%
TGTTCAACTTCCTCCAAACC+AGG + chr3_4:52212233-52212252 None:intergenic 45.0%
TGGTCATGAGAGAAAGGTGA+AGG - chr3_4:52212340-52212359 Msa0506010:intron 45.0%
TCATGAGAGAAAGGTGAAGG+AGG - chr3_4:52212343-52212362 Msa0506010:intron 45.0%
! GAAGGAGGCTATGAGTATTG+TGG - chr3_4:52212358-52212377 Msa0506010:intron 45.0%
!! AAAGACTAGTGCTGATGCTG+AGG - chr3_4:52212436-52212455 Msa0506010:intron 45.0%
TTGCAGGAACTTGTGTTAGG+TGG - chr3_4:52212726-52212745 Msa0506010:CDS 45.0%
GCAAATTCAGCTGCATGTGA+TGG + chr3_4:52212762-52212781 None:intergenic 45.0%
GTGGCTCGTTGAAGTAAATC+TGG + chr3_4:52212807-52212826 None:intergenic 45.0%
TCAACGAGCCACTGAAGAAT+TGG - chr3_4:52212815-52212834 Msa0506010:CDS 45.0%
TAATCCTCCCCATGTTGCTA+TGG - chr3_4:52212947-52212966 Msa0506010:CDS 45.0%
TGTGGTTCCAAGCACAATTC+CGG + chr3_4:52213177-52213196 None:intergenic 45.0%
TTATTAGGCAGGTTGCTCCA+TGG - chr3_4:52213209-52213228 Msa0506010:CDS 45.0%
TCCAATGGTGATAGATACCC+TGG - chr3_4:52213284-52213303 Msa0506010:CDS 45.0%
! TCCAGGGTATCTATCACCAT+TGG + chr3_4:52213288-52213307 None:intergenic 45.0%
AATGGTGATAGATACCCTGG+AGG - chr3_4:52213287-52213306 Msa0506010:CDS 45.0%
ATGGTGATAGATACCCTGGA+GGG - chr3_4:52213288-52213307 Msa0506010:CDS 45.0%
GGCAATAGCAAAGCCAAGAT+TGG - chr3_4:52213319-52213338 Msa0506010:CDS 45.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_4:52211629-52211648 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_4:52211629-52211648 Msa0506010:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_4:52213362-52213381 None:intergenic 5.0%
!! TAAAACTAAAAAATATAATA+AGG + chr3_4:52211629-52211648 None:intergenic 5.0%
!!! TATTATATTTTTTAGTTTTA+TGG - chr3_4:52211629-52211648 Msa0506010:three_prime_UTR 5.0%
!!! TTAAATTTTCAAATATTTTA+TGG + chr3_4:52213362-52213381 None:intergenic 5.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_4:52211595-52211614 Msa0506010:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_4:52211712-52211731 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_4:52211714-52211733 Msa0506010:CDS 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_4:52211810-52211829 Msa0506010:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_4:52211957-52211976 Msa0506010:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_4:52212206-52212225 Msa0506010:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_4:52212217-52212236 Msa0506010:CDS 50.0%
GGAACTTGTGTTAGGTGGAG+TGG - chr3_4:52212731-52212750 Msa0506010:CDS 50.0%
TTGTCCATAGCAACATGGGG+AGG + chr3_4:52212954-52212973 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_4:52213146-52213165 Msa0506010:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_4:52213176-52213195 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_4:52213219-52213238 Msa0506010:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_4:52213224-52213243 Msa0506010:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_4:52213229-52213248 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_4:52213314-52213333 None:intergenic 50.0%
CGCTACTCTCTCAGTCGTTT+AGG - chr3_4:52211595-52211614 Msa0506010:three_prime_UTR 50.0%
! TATAGGCCATGGTTTGGGAC+CGG + chr3_4:52211712-52211731 None:intergenic 50.0%
CCCAAACCATGGCCTATAGT+TGG - chr3_4:52211714-52211733 Msa0506010:CDS 50.0%
GAAATAGCGTGTATCCGCCT+AGG - chr3_4:52211810-52211829 Msa0506010:CDS 50.0%
GCATCAGCTGTTACACCCTT+TGG - chr3_4:52211957-52211976 Msa0506010:CDS 50.0%
GGAGAAGGAAGGAATGATGG+TGG - chr3_4:52212206-52212225 Msa0506010:CDS 50.0%
!! GAATGATGGTGGTCCTGGTT+TGG - chr3_4:52212217-52212236 Msa0506010:CDS 50.0%
GGAACTTGTGTTAGGTGGAG+TGG - chr3_4:52212731-52212750 Msa0506010:CDS 50.0%
TTGTCCATAGCAACATGGGG+AGG + chr3_4:52212954-52212973 None:intergenic 50.0%
TCATTTAGTACGGGAAGGCG+TGG - chr3_4:52213146-52213165 Msa0506010:CDS 50.0%
GTGGTTCCAAGCACAATTCC+GGG + chr3_4:52213176-52213195 None:intergenic 50.0%
GGTTGCTCCATGGATTCGAT+TGG - chr3_4:52213219-52213238 Msa0506010:CDS 50.0%
CTCCATGGATTCGATTGGAG+TGG - chr3_4:52213224-52213243 Msa0506010:CDS 50.0%
GACCACTCCAATCGAATCCA+TGG + chr3_4:52213229-52213248 None:intergenic 50.0%
!! GGCTTTGCTATTGCCACTAG+TGG + chr3_4:52213314-52213333 None:intergenic 50.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_4:52211593-52211612 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_4:52211700-52211719 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_4:52211711-52211730 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_4:52211852-52211871 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_4:52211859-52211878 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_4:52212024-52212043 Msa0506010:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_4:52212030-52212049 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_4:52212031-52212050 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_4:52212212-52212231 Msa0506010:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_4:52212220-52212239 Msa0506010:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_4:52213167-52213186 Msa0506010:CDS 55.0%
ACGACTGAGAGAGTAGCGGT+AGG + chr3_4:52211593-52211612 None:intergenic 55.0%
! TTTGGGACCGGGTGGTAGTT+TGG + chr3_4:52211700-52211719 None:intergenic 55.0%
! ATAGGCCATGGTTTGGGACC+GGG + chr3_4:52211711-52211730 None:intergenic 55.0%
! GCAATGGTGGGACAGGTAAC+AGG + chr3_4:52211852-52211871 None:intergenic 55.0%
! TTCAAGGGCAATGGTGGGAC+AGG + chr3_4:52211859-52211878 None:intergenic 55.0%
TCTCCCCTCACAGGCATCAA+TGG - chr3_4:52212024-52212043 Msa0506010:CDS 55.0%
GAGCCATTGATGCCTGTGAG+GGG + chr3_4:52212030-52212049 None:intergenic 55.0%
CGAGCCATTGATGCCTGTGA+GGG + chr3_4:52212031-52212050 None:intergenic 55.0%
!! GGAAGGAATGATGGTGGTCC+TGG - chr3_4:52212212-52212231 Msa0506010:CDS 55.0%
!! TGATGGTGGTCCTGGTTTGG+AGG - chr3_4:52212220-52212239 Msa0506010:CDS 55.0%
GGTTGTCCCGGAATTGTGCT+TGG - chr3_4:52213167-52213186 Msa0506010:CDS 55.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_4:52211703-52211722 Msa0506010:CDS 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_4:52212032-52212051 None:intergenic 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_4:52213298-52213317 Msa0506010:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_4:52213304-52213323 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_4:52213305-52213324 None:intergenic 60.0%
TACCACCCGGTCCCAAACCA+TGG - chr3_4:52211703-52211722 Msa0506010:CDS 60.0%
GCGAGCCATTGATGCCTGTG+AGG + chr3_4:52212032-52212051 None:intergenic 60.0%
ATACCCTGGAGGGCCACTAG+TGG - chr3_4:52213298-52213317 Msa0506010:CDS 60.0%
TTGCCACTAGTGGCCCTCCA+GGG + chr3_4:52213304-52213323 None:intergenic 60.0%
ATTGCCACTAGTGGCCCTCC+AGG + chr3_4:52213305-52213324 None:intergenic 60.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_4:52213155-52213174 Msa0506010:CDS 65.0%
! ACGGGAAGGCGTGGTTGTCC+CGG - chr3_4:52213155-52213174 Msa0506010:CDS 65.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_4:52211708-52211727 None:intergenic 70.0%
! GGCCATGGTTTGGGACCGGG+TGG + chr3_4:52211708-52211727 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 52211501 52213544 52211501 ID=Msa0506010;Name=Msa0506010
chr3_4 mRNA 52211501 52213544 52211501 ID=Msa0506010-mRNA-1;Parent=Msa0506010;Name=Msa0506010-mRNA-1;_AED=0.26;_eAED=0.26;_QI=54|1|1|1|1|1|2|180|539
chr3_4 exon 52211501 52212313 52211501 ID=Msa0506010-mRNA-1:exon:11386;Parent=Msa0506010-mRNA-1
chr3_4 exon 52212504 52213544 52212504 ID=Msa0506010-mRNA-1:exon:11385;Parent=Msa0506010-mRNA-1
chr3_4 five_prime_UTR 52213491 52213544 52213491 ID=Msa0506010-mRNA-1:five_prime_utr;Parent=Msa0506010-mRNA-1
chr3_4 CDS 52212504 52213490 52212504 ID=Msa0506010-mRNA-1:cds;Parent=Msa0506010-mRNA-1
chr3_4 CDS 52211681 52212313 52211681 ID=Msa0506010-mRNA-1:cds;Parent=Msa0506010-mRNA-1
chr3_4 three_prime_UTR 52211501 52211680 52211501 ID=Msa0506010-mRNA-1:three_prime_utr;Parent=Msa0506010-mRNA-1
Gene Sequence

>Msa0506010

ATGCTTTTCCAAGCTATGAGCTACACTTCTGGTTTCCTACCGCTACTCTCTCAGTCGTTTAGGCATCTTTTCCTTATTATATTTTTTAGTTTTATGGTAATCAAAACCATAAGATACCACTTTGTTGAGAACCCTAAAAAAGCCAAACTACCACCCGGTCCCAAACCATGGCCTATAGTTGGTAATATTCCTGAAATGCTTGCAAATAAACCTGCAACTAGGTGGATACATAAGATAATGGAAGAATTGAACACTGAAATAGCGTGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACCTGTCCCACCATTGCCCTTGAATTCTTGAGAAAGAATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAAAGGTTTCTTGGCATCAGCTGTTACACCCTTTGGGGAACAATGGAAAAAAATGAAAAAAATATTTGTTAATGAATTGTTCTCCCCTCACAGGCATCAATGGCTCGCAAACAAAAGGAATGAGGAAGCTGATAACATAATGTTTTATGTCTACGACAAATGCAAAAATGCAAACGATAATGGTCTTGTGAATGTTAAGATTGTTACAAGGCATTATTGTTGCAATTTGATGAGGAAATTGGTTTTTAATAGAAGGTACTTTGGAGAAGGAAGGAATGATGGTGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGATATGTTTTTGCCTTTTGTGTTTCTGATTATATGCCATTCTTTAGAGGACTTGACTTTGATGGTCATGAGAGAAAGGTGAAGGAGGCTATGAGTATTGTGGACAAGTATAATGATCCAATCATTGAGAAGAGAATTGAAAAATGGAAAGATGAATCAAAGACTAGTGCTGATGCTGAGGACTTACTTGATATTCTAATCTCCCTTAAAGATGCCAACAACAAACCATTATTGACATTAGAGGAAATAAAGGCTCAAGCTCTAGAACTTGTGTTAGGTGGAGTGGACAATCCATCACATGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAGCCAGATTTACTTCAACGAGCCACTGAAGAATTGGATAGTATCGTAGGAAAACAACGACTAGTCCAAGAATCGGATATTCCAAACCTCAACTATGTGAAAGCTTGTGCTAAAGAAGCTTTTCGCCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAGTGGTTGCCAATTACATGATTCCAAAAGGTAGTCATGTAGTTATAAGCAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAAGCTCTCAAATTTAAACCAGAACGCCATCTAAAAAATGATGGGTCTATGGTAGTTTTGGCAGAACCAGATTTGAAGTTCATATCATTTAGTACGGGAAGGCGTGGTTGTCCCGGAATTGTGCTTGGAACCACAATGACTGTGATGTTATTAGGCAGGTTGCTCCATGGATTCGATTGGAGTGGTCCTCCTAATGCATCAACCATTGAACTTCTCAAGTATTCCAATGGTGATAGATACCCTGGAGGGCCACTAGTGGCAATAGCAAAGCCAAGATTGGCATCAGAATTATATCATCCATAA
Protein sequence

>Msa0506010

MLFQAMSYTSGFLPLLSQSFRHLFLIIFFSFMVIKTIRYHFVENPKKAKLPPGPKPWPIVGNIPEMLANKPATRWIHKIMEELNTEIACIRLGNVHVIPVTCPTIALEFLRKNDATFASRPISMSTDIISKGFLASAVTPFGEQWKKMKKIFVNELFSPHRHQWLANKRNEEADNIMFYVYDKCKNANDNGLVNVKIVTRHYCCNLMRKLVFNRRYFGEGRNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPFFRGLDFDGHERKVKEAMSIVDKYNDPIIEKRIEKWKDESKTSADAEDLLDILISLKDANNKPLLTLEEIKAQALELVLGGVDNPSHAAEFAIAEMINQPDLLQRATEELDSIVGKQRLVQESDIPNLNYVKACAKEAFRLHPITIFNPPHVAMDNIVVANYMIPKGSHVVISKQGLGRNPKVWNEALKFKPERHLKNDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTVMLLGRLLHGFDWSGPPNASTIELLKYSNGDRYPGGPLVAIAKPRLASELYHP*