AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506240 MtrunA17_Chr3g0107491 95.756 377 12 2 1 373 1 377 0.0 744
Msa0506240 MtrunA17_Chr5g0432701 71.471 340 67 6 34 373 49 358 5.39e-168 473
Msa0506240 MtrunA17_Chr3g0128781 46.532 346 136 11 36 373 7 311 9.71e-87 265
Msa0506240 MtrunA17_Chr2g0329551 52.290 262 91 8 36 274 72 322 3.86e-69 223
Msa0506240 MtrunA17_Chr6g0463571 46.263 281 117 14 34 305 26 281 2.85e-54 181
Msa0506240 MtrunA17_Chr4g0036071 38.782 312 117 4 32 270 147 457 1.37e-52 182
Msa0506240 MtrunA17_Chr1g0156051 40.385 260 98 6 63 265 220 479 3.47e-32 127
Msa0506240 MtrunA17_Chr2g0316551 46.316 95 51 0 171 265 206 300 1.23e-20 92.0
Msa0506240 MtrunA17_Chr2g0325131 47.312 93 49 0 173 265 191 283 1.10e-19 89.0
Msa0506240 MtrunA17_Chr4g0040891 41.379 116 57 1 173 277 194 309 4.11e-19 87.4
Msa0506240 MtrunA17_Chr1g0202051 33.939 165 93 3 106 270 73 221 7.24e-18 82.8
Msa0506240 MtrunA17_Chr8g0380611 41.935 93 49 1 173 265 234 321 3.78e-12 67.0
Msa0506240 MtrunA17_Chr2g0306581 63.265 49 18 0 161 209 1 49 8.59e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506240 AT2G40620.1 47.783 406 136 14 5 373 1 367 1.27e-99 300
Msa0506240 AT1G06850.1 64.455 211 64 3 152 362 127 326 3.74e-84 259
Msa0506240 AT2G31370.5 50.000 272 111 9 36 291 58 320 1.44e-67 218
Msa0506240 AT2G31370.2 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT2G31370.4 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT2G31370.1 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT2G31370.7 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT2G31370.3 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT2G31370.6 50.549 273 108 10 36 291 58 320 3.25e-67 218
Msa0506240 AT1G06070.1 50.787 254 109 7 36 281 73 318 2.09e-63 208
Msa0506240 AT4G38900.2 40.166 361 116 14 16 280 146 502 2.94e-51 179
Msa0506240 AT4G38900.3 40.166 361 116 14 16 280 146 502 2.94e-51 179
Msa0506240 AT4G38900.1 39.510 367 116 15 16 280 146 508 8.83e-49 173
Msa0506240 AT1G43700.1 55.882 170 64 3 135 293 146 315 1.65e-45 159
Msa0506240 AT2G21230.4 67.826 115 37 0 156 270 353 467 1.69e-42 155
Msa0506240 AT2G21230.1 67.826 115 37 0 156 270 353 467 1.69e-42 155
Msa0506240 AT1G06850.2 87.013 77 10 0 152 228 127 203 2.67e-40 142
Msa0506240 AT2G21230.3 63.636 121 38 1 156 270 353 473 1.67e-39 147
Msa0506240 AT2G21230.2 68.687 99 31 0 156 254 353 451 2.73e-36 137
Msa0506240 AT2G12900.1 41.346 104 60 1 165 268 109 211 2.87e-20 89.7
Msa0506240 AT3G58120.1 46.237 93 50 0 173 265 202 294 6.34e-20 90.1
Msa0506240 AT2G42380.2 45.745 94 51 0 172 265 185 278 6.63e-20 89.7
Msa0506240 AT2G13150.1 41.584 101 58 1 165 265 142 241 1.58e-17 82.0
Msa0506240 AT2G12940.1 39.423 104 62 1 164 267 140 242 4.10e-17 81.3
Msa0506240 AT2G42380.5 45.238 84 46 0 171 254 184 267 6.25e-17 80.5
Msa0506240 AT2G21235.1 34.028 144 63 2 173 284 359 502 1.89e-16 81.3
Msa0506240 AT3G58120.2 46.835 79 42 0 173 251 202 280 6.88e-16 77.8
Msa0506240 AT2G42380.1 40.426 94 45 1 172 265 185 267 1.62e-13 71.2
Msa0506240 AT1G58110.1 44.048 84 47 0 182 265 238 321 1.65e-12 68.6
Msa0506240 AT1G58110.2 44.048 84 47 0 182 265 238 321 1.65e-12 68.6

Find 151 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCTACTGACTTATTTA+TGG 0.103262 3_4:-52434578 Msa0506240:three_prime_UTR
ATTCTTGATTGTTTATTCTT+AGG 0.126299 3_4:-52434461 Msa0506240:three_prime_UTR
ACAAGGGTGCTTCCCCTATT+TGG 0.130555 3_4:+52434430 None:intergenic
CATATTGAAGCGTGGCATTT+TGG 0.200017 3_4:-52434380 Msa0506240:three_prime_UTR
CCCCTCTGAATCGTATAATA+TGG 0.210184 3_4:-52434898 Msa0506240:CDS
AACATACAATTTCCCCAATT+TGG 0.232116 3_4:-52434801 Msa0506240:CDS
CAAGGGTGCTTCCCCTATTT+GGG 0.238340 3_4:+52434431 None:intergenic
CTTAGGGATGCTCCCCAAAT+AGG 0.245676 3_4:-52434444 Msa0506240:three_prime_UTR
AATTCGAATCAGACCGGTTA+TGG 0.273109 3_4:-52437133 Msa0506240:CDS
GGAGGATCCGCCGCCGGTTA+AGG 0.280693 3_4:+52437246 None:intergenic
CAAAGCTCAGCGAGTTTATC+AGG 0.287151 3_4:+52436935 None:intergenic
TCCAACGCCGGCGCCGGCAC+CGG 0.292522 3_4:+52437102 None:intergenic
CCGTCTCCCCGACGACATTA+TGG 0.308655 3_4:-52437287 Msa0506240:CDS
TTCTTGATTGTTTATTCTTA+GGG 0.310849 3_4:-52434460 Msa0506240:three_prime_UTR
GCCGGTGCCGGCGCCGGCGT+TGG 0.313085 3_4:-52437103 Msa0506240:CDS
TGCCCAGTTGACATTATTCC+AGG 0.319777 3_4:-52435839 Msa0506240:intron
CGATCAGCTCGGTCGTTTGC+AGG 0.321109 3_4:-52434703 Msa0506240:CDS
CACTTTGTATCTTTGTATGT+TGG 0.322316 3_4:-52434320 Msa0506240:three_prime_UTR
AGCTGAGATTTGGTGAGAAT+TGG 0.342600 3_4:+52434737 None:intergenic
AGATGGGGAGTGACCAAATT+GGG 0.344045 3_4:+52434788 None:intergenic
TTAGGGATGCTCCCCAAATA+GGG 0.347174 3_4:-52434443 Msa0506240:three_prime_UTR
GTTTGTTGCAACTGATAATT+CGG 0.347347 3_4:+52434759 None:intergenic
GTCAGTAGGTCAAGGAGTTT+AGG 0.356324 3_4:+52434588 None:intergenic
CAGATGGGGAGTGACCAAAT+TGG 0.358510 3_4:+52434787 None:intergenic
CATCTTACATGTCCTTCAAT+TGG 0.360792 3_4:+52434216 None:intergenic
ACTTTGTATCTTTGTATGTT+GGG 0.367471 3_4:-52434319 Msa0506240:three_prime_UTR
TGTTGTATTGTTCCAATTGA+AGG 0.367690 3_4:-52434228 Msa0506240:three_prime_UTR
TGACCTGGAATAATGTCAAC+TGG 0.367981 3_4:+52435836 None:intergenic
CTCGTCGAGGCTGGCGGTGG+AGG 0.374419 3_4:+52437228 None:intergenic
GGGTTCGCCGGCGACGGTGG+TGG 0.376326 3_4:+52437348 None:intergenic
AATTGCGCCGGTGCCGGCGC+CGG 0.381787 3_4:-52437109 Msa0506240:CDS
CCACAACATTCAGGTCCTTC+AGG 0.383951 3_4:-52434831 Msa0506240:CDS
TTTGCAACATAGCTGAGATT+TGG 0.394152 3_4:+52434727 None:intergenic
TATGGTAATTGCGCCGGTGC+CGG 0.396865 3_4:-52437115 Msa0506240:CDS
CATTGATGAAGGAAGTTGAT+AGG 0.399001 3_4:-52434950 Msa0506240:CDS
GGGGAGACGGTAGTTGATTT+CGG 0.404834 3_4:+52437300 None:intergenic
AGACATAGCTGCTCTGTTGA+TGG 0.408343 3_4:-52437016 Msa0506240:CDS
ATGCACCAGATGCAATTTGC+AGG 0.409287 3_4:-52434873 Msa0506240:CDS
GAGGATCCGCCGCCGGTTAA+GGG 0.411594 3_4:+52437247 None:intergenic
CTATAGACAATTGAAGATAA+TGG 0.414062 3_4:+52434551 None:intergenic
CTGATAAACTCGCTGAGCTT+TGG 0.417393 3_4:-52436934 Msa0506240:CDS
TCCCCTTCCGATCCCTTAAC+CGG 0.422801 3_4:-52437259 Msa0506240:CDS
ACCGGCGCAATTACCATAAC+CGG 0.425953 3_4:+52437120 None:intergenic
CCCTCTGAATCGTATAATAT+GGG 0.427345 3_4:-52434897 Msa0506240:CDS
CTATGTCTATGCCTCGTTCT+CGG 0.435904 3_4:+52437031 None:intergenic
TTGAACGCGCAGCAGATTGC+CGG 0.443274 3_4:+52435938 None:intergenic
TGATAATTCGGCACGTCAGA+TGG 0.444587 3_4:+52434771 None:intergenic
GGATCCGATCTCGTCGAGGC+TGG 0.450337 3_4:+52437219 None:intergenic
GGCGCGACGGTGGTGAGAGT+GGG 0.450968 3_4:+52437327 None:intergenic
GAGTTGTAGCCTCTGTTTGA+AGG 0.453582 3_4:+52435866 None:intergenic
AGAGTGGGGTTCGCCGGCGA+CGG 0.455624 3_4:+52437342 None:intergenic
AAATGAAATATTTAATGAAA+AGG 0.458073 3_4:+52434497 None:intergenic
TTCATCCGCGGCAGCGTCAA+CGG 0.465598 3_4:-52437376 Msa0506240:CDS
GATCAGCTCGGTCGTTTGCA+GGG 0.472645 3_4:-52434702 Msa0506240:CDS
GGGCGCGACGGTGGTGAGAG+TGG 0.474328 3_4:+52437326 None:intergenic
ACGTCGACGACGAATATGTT+TGG 0.474748 3_4:-52436989 Msa0506240:CDS
GAGAGGTCCATAATGTCGTC+GGG 0.474927 3_4:+52437280 None:intergenic
TCTGCAATCCATGGAACAAC+AGG 0.475201 3_4:-52435204 Msa0506240:CDS
TTGATCCAAAACGTGCTAAG+AGG 0.475774 3_4:-52436907 Msa0506240:intron
ACTCTCACTTGCAGAGATTG+AGG 0.477229 3_4:+52434632 None:intergenic
TTGACCCTGCAAATTGCATC+TGG 0.487667 3_4:+52434868 None:intergenic
TGAATTATCCAAAACAGAAA+AGG 0.488063 3_4:-52434195 Msa0506240:three_prime_UTR
GATCTCGTCGAGGCTGGCGG+TGG 0.494121 3_4:+52437225 None:intergenic
ATTGGGGAAATTGTATGTTC+TGG 0.495354 3_4:+52434805 None:intergenic
GACGTTGGAAGAAGGTGCAT+TGG 0.495650 3_4:+52437399 None:intergenic
CTCTCACTTGCAGAGATTGA+GGG 0.495905 3_4:+52434633 None:intergenic
GAATATGTTTGGAGAGATCA+TGG 0.496464 3_4:-52436978 Msa0506240:CDS
CCATAATGTCGTCGGGGAGA+CGG 0.497730 3_4:+52437287 None:intergenic
ACGTTGGAAGAAGGTGCATT+GGG 0.501336 3_4:+52437400 None:intergenic
AAAAGAAGAAGAAAATAGAA+TGG 0.503574 3_4:-52437440 Msa0506240:exon
ACTCGTTCCAACGCCGGCGC+CGG 0.503823 3_4:+52437096 None:intergenic
GATAGGCTTAAGATTGCTAC+CGG 0.505157 3_4:-52434933 Msa0506240:CDS
GCCGGTTAAGGGATCGGAAG+GGG 0.507894 3_4:+52437258 None:intergenic
AAGGGTGCTTCCCCTATTTG+GGG 0.509243 3_4:+52434432 None:intergenic
ACGGTAGTTGATTTCGGAGT+GGG 0.509526 3_4:+52437306 None:intergenic
CAAGCTCCGTCTGCAATCCA+TGG 0.511411 3_4:-52435213 Msa0506240:CDS
TTCAAGCTCTTGTATATAGC+GGG 0.514078 3_4:+52435903 None:intergenic
TCCGATCCCTTAACCGGCGG+CGG 0.520683 3_4:-52437253 Msa0506240:CDS
ACCGCCAGCCTCGACGAGAT+CGG 0.521810 3_4:-52437223 Msa0506240:CDS
GGTGAAGAAGAGATCGTCTT+CGG 0.522787 3_4:+52437198 None:intergenic
GATAATTCGGCACGTCAGAT+GGG 0.528159 3_4:+52434772 None:intergenic
GTGGGGTTCGCCGGCGACGG+TGG 0.529051 3_4:+52437345 None:intergenic
GGCGTCTCCACCACCGTCGC+CGG 0.529586 3_4:-52437355 Msa0506240:CDS
GGCGGTGGAGGATCCGCCGC+CGG 0.530555 3_4:+52437240 None:intergenic
AAGGTGTGCCTGTTGTTCCA+TGG 0.533755 3_4:+52435196 None:intergenic
AGAGGGGTTCATTGCCTCCC+CGG 0.534741 3_4:+52434914 None:intergenic
ATCAGCTCGGTCGTTTGCAG+GGG 0.540633 3_4:-52434701 Msa0506240:CDS
TCCGCCGCCGGTTAAGGGAT+CGG 0.540686 3_4:+52437252 None:intergenic
TGTGCAGAATACTTGCAAAC+CGG 0.544736 3_4:-52435957 Msa0506240:intron
CGGATGAAGACGTTGGAAGA+AGG 0.546097 3_4:+52437391 None:intergenic
TTAAGGGATCGGAAGGGGAG+AGG 0.548310 3_4:+52437263 None:intergenic
CCCATATTATACGATTCAGA+GGG 0.549325 3_4:+52434897 None:intergenic
TACATTGACGTCGAGAAGCT+CGG 0.549346 3_4:-52437175 Msa0506240:CDS
GACATGTAGTCATCTAATGA+AGG 0.554193 3_4:-52434524 Msa0506240:three_prime_UTR
TGCGCGTTCAAAAGAGAGAA+AGG 0.557307 3_4:-52435926 Msa0506240:CDS
GAGCTTCTCGACGTCAATGT+AGG 0.558602 3_4:+52437177 None:intergenic
GTGGTGAGAGTGGGGTTCGC+CGG 0.559617 3_4:+52437336 None:intergenic
ACCGGTTATGGTAATTGCGC+CGG 0.559845 3_4:-52437121 Msa0506240:CDS
AGTTGTAGCCTCTGTTTGAA+GGG 0.560730 3_4:+52435867 None:intergenic
TCTTAATGATGCATTGATGA+AGG 0.561151 3_4:-52434961 Msa0506240:CDS
ATAAATAAGTCAGTAGGTCA+AGG 0.569197 3_4:+52434580 None:intergenic
TCCCATATTATACGATTCAG+AGG 0.571914 3_4:+52434896 None:intergenic
TTTCGGAGTGGGCGCGACGG+TGG 0.577554 3_4:+52437317 None:intergenic
CCGCCGGTTAAGGGATCGGA+AGG 0.578667 3_4:+52437256 None:intergenic
TCCGATCTCGTCGAGGCTGG+CGG 0.580811 3_4:+52437222 None:intergenic
TATACAAGAGCTTGAACGCA+AGG 0.583220 3_4:-52435896 Msa0506240:CDS
ATGATACACATGACCAAAGA+GGG 0.583829 3_4:+52434284 None:intergenic
GTTGTTCCATGGATTGCAGA+CGG 0.584302 3_4:+52435207 None:intergenic
GGAGAGGTCCATAATGTCGT+CGG 0.585789 3_4:+52437279 None:intergenic
TTGCAGACGGAGCTTGAGCT+CGG 0.586207 3_4:+52435220 None:intergenic
GGGCTTGACATCAGTAGCAA+AGG 0.594432 3_4:-52434681 Msa0506240:CDS
TCTCACTTGCAGAGATTGAG+GGG 0.600065 3_4:+52434634 None:intergenic
ATTACTACTCGTTCCAACGC+CGG 0.600124 3_4:+52437090 None:intergenic
AAGCTCGGCGGAGTAACAAA+CGG 0.613231 3_4:-52437160 Msa0506240:CDS
GTTCAAGCTCTTGTATATAG+CGG 0.616568 3_4:+52435902 None:intergenic
GCGCGACGGTGGTGAGAGTG+GGG 0.616993 3_4:+52437328 None:intergenic
CAACAGGCACACCTTCGAGA+TGG 0.617131 3_4:-52435188 Msa0506240:intron
GACGGTAGTTGATTTCGGAG+TGG 0.621392 3_4:+52437305 None:intergenic
TAGGGATGCTCCCCAAATAG+GGG 0.622078 3_4:-52434442 Msa0506240:three_prime_UTR
CTCACTTGCAGAGATTGAGG+GGG 0.623339 3_4:+52434635 None:intergenic
ATAGGCTTAAGATTGCTACC+GGG 0.624945 3_4:-52434932 Msa0506240:CDS
AGTACCATAAATAAGTCAGT+AGG 0.625927 3_4:+52434574 None:intergenic
AGACGCCGTTGACGCTGCCG+CGG 0.626363 3_4:+52437371 None:intergenic
TGCACCAGATGCAATTTGCA+GGG 0.627466 3_4:-52434872 Msa0506240:CDS
GATGATACACATGACCAAAG+AGG 0.628268 3_4:+52434283 None:intergenic
GGTTCGAATTCGAATCAGAC+CGG 0.629064 3_4:-52437139 Msa0506240:CDS
GACCTGGAATAATGTCAACT+GGG 0.629554 3_4:+52435837 None:intergenic
ATAATTCGGCACGTCAGATG+GGG 0.631949 3_4:+52434773 None:intergenic
GATGGGGAGTGACCAAATTG+GGG 0.632562 3_4:+52434789 None:intergenic
AATAGTAGCTACCATCTCGA+AGG 0.635096 3_4:+52435177 None:intergenic
TCTTCCAACGTCTTCATCCG+CGG 0.635241 3_4:-52437388 Msa0506240:CDS
TGATTTCGGAGTGGGCGCGA+CGG 0.636065 3_4:+52437314 None:intergenic
GCTGCCGCGGATGAAGACGT+TGG 0.650000 3_4:+52437384 None:intergenic
CGCCGGTTAAGGGATCGGAA+GGG 0.650200 3_4:+52437257 None:intergenic
ATGTTACGACGCCGAGAACG+AGG 0.652742 3_4:-52437042 Msa0506240:CDS
TGTATGTTCTGGTGACCTGA+AGG 0.654943 3_4:+52434816 None:intergenic
TAGGCTTAAGATTGCTACCG+GGG 0.656168 3_4:-52434931 Msa0506240:CDS
CACGCAATCATATTGAAGCG+TGG 0.661649 3_4:-52434388 Msa0506240:three_prime_UTR
CACGCTTCAATATGATTGCG+TGG 0.667421 3_4:+52434389 None:intergenic
CTTCGGATCCGATCTCGTCG+AGG 0.668308 3_4:+52437215 None:intergenic
CCTGAAGGACCTGAATGTTG+TGG 0.674365 3_4:+52434831 None:intergenic
AAATAGGGGAAGCACCCTTG+TGG 0.674897 3_4:-52434428 Msa0506240:three_prime_UTR
GGTTCAGACCCTTCAAACAG+AGG 0.679114 3_4:-52435875 Msa0506240:CDS
CCATATTATACGATTCAGAG+GGG 0.685145 3_4:+52434898 None:intergenic
GCTTAAGATTGCTACCGGGG+AGG 0.689095 3_4:-52434928 Msa0506240:CDS
CCTTCCGATCCCTTAACCGG+CGG 0.692804 3_4:-52437256 Msa0506240:CDS
AGAGGTCCATAATGTCGTCG+GGG 0.698449 3_4:+52437281 None:intergenic
AGCTCAGCGAGTTTATCAGG+AGG 0.701452 3_4:+52436938 None:intergenic
ATGTTGCAAAACGATCAGCT+CGG 0.741818 3_4:-52434714 Msa0506240:CDS
GGAACGAGTAGTAATAACGA+CGG 0.762178 3_4:-52437082 Msa0506240:CDS
ATTGACGTCGAGAAGCTCGG+CGG 0.768385 3_4:-52437172 Msa0506240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAAATATTTAATGAAA+AGG + chr3_4:52437214-52437233 None:intergenic 10.0%
!!! TCAACTTTTTTTTATTGAAT+TGG - chr3_4:52434857-52434876 Msa0506240:CDS 15.0%
!!! CTTTTTTTTTTTTTGACAAA+CGG - chr3_4:52434918-52434937 Msa0506240:CDS 15.0%
!! AAAATACTAGTAATTTAGAT+TGG - chr3_4:52436296-52436315 Msa0506240:intron 15.0%
!! AAAAGAAGAAGAAAATAGAA+TGG - chr3_4:52434268-52434287 Msa0506240:three_prime_UTR 20.0%
!!! TTGATTTTATCTAGATTCAT+CGG - chr3_4:52434887-52434906 Msa0506240:CDS 20.0%
!!! TTTTAGAAAAGACTACAATT+TGG - chr3_4:52435185-52435204 Msa0506240:intron 20.0%
!!! ATATAGTTAGTATTGACATT+TGG - chr3_4:52435263-52435282 Msa0506240:intron 20.0%
!!! ATGATGAATAAGAGTTTTTT+TGG + chr3_4:52435378-52435397 None:intergenic 20.0%
!! TGTTTCAGTTTATTCAAAAA+TGG + chr3_4:52435454-52435473 None:intergenic 20.0%
!!! AAGTTAGAATATTCCATTTT+TGG - chr3_4:52435473-52435492 Msa0506240:intron 20.0%
!!! TGATTTGAAATCTAGTTTTT+TGG - chr3_4:52435502-52435521 Msa0506240:intron 20.0%
!!! TTTCAAAAACTGAATTTTAG+TGG - chr3_4:52435680-52435699 Msa0506240:intron 20.0%
!! TACACAAACTTATATGTTAT+AGG - chr3_4:52436404-52436423 Msa0506240:intron 20.0%
!! ATTCTTGATTGTTTATTCTT+AGG - chr3_4:52437247-52437266 Msa0506240:CDS 20.0%
!! TTCTTGATTGTTTATTCTTA+GGG - chr3_4:52437248-52437267 Msa0506240:CDS 20.0%
!!! GATCTTGAAGTATTTCTTTT+TGG - chr3_4:52435085-52435104 Msa0506240:intron 25.0%
! TTGGAATGTTAATGTTGAAA+TGG - chr3_4:52435104-52435123 Msa0506240:intron 25.0%
! TGGAATGTTAATGTTGAAAT+GGG - chr3_4:52435105-52435124 Msa0506240:intron 25.0%
! CAAATCATCTAAACCAAAAA+TGG + chr3_4:52435489-52435508 None:intergenic 25.0%
! AAATGCATTTACAATTACTG+TGG - chr3_4:52435544-52435563 Msa0506240:intron 25.0%
! TATAATCAAAAGCTGCAAAA+TGG + chr3_4:52436038-52436057 None:intergenic 25.0%
! AACTGCAAATATTTCTTCTT+CGG - chr3_4:52436070-52436089 Msa0506240:intron 25.0%
! TTATCTACTAGAAGAAAGAA+AGG + chr3_4:52436249-52436268 None:intergenic 25.0%
!!! TTGGCAAGTTATTTTAGTAA+TGG - chr3_4:52436315-52436334 Msa0506240:intron 25.0%
!!! ATCACTTATTGATTTTTCAG+AGG - chr3_4:52436437-52436456 Msa0506240:intron 25.0%
!!! TCACTTATTGATTTTTCAGA+GGG - chr3_4:52436438-52436457 Msa0506240:intron 25.0%
! GTAAATCATAAGAAAGTGAT+TGG + chr3_4:52436562-52436581 None:intergenic 25.0%
! TTGTATCATAAGAAAGTGAT+TGG + chr3_4:52436624-52436643 None:intergenic 25.0%
! CCACTAACTAATTATAACAA+AGG + chr3_4:52436698-52436717 None:intergenic 25.0%
!! CCTTTGTTATAATTAGTTAG+TGG - chr3_4:52436695-52436714 Msa0506240:intron 25.0%
! CTATAGACAATTGAAGATAA+TGG + chr3_4:52437160-52437179 None:intergenic 25.0%
!!! TTTTAAAAGTTCGGAATGAA+AGG - chr3_4:52437360-52437379 Msa0506240:CDS 25.0%
! ACTTTGTATCTTTGTATGTT+GGG - chr3_4:52437389-52437408 Msa0506240:CDS 25.0%
AGTAGTTGATTACGATTGTT+TGG - chr3_4:52435049-52435068 Msa0506240:intron 30.0%
GTAGTTGATTACGATTGTTT+GGG - chr3_4:52435050-52435069 Msa0506240:intron 30.0%
!! AAATGGGAATTTTAATGCGT+CGG - chr3_4:52435121-52435140 Msa0506240:intron 30.0%
CAATGAATTTGGCAAAATCA+CGG + chr3_4:52435230-52435249 None:intergenic 30.0%
TTGAATGTTGCGTGTTTAAA+TGG - chr3_4:52435595-52435614 Msa0506240:intron 30.0%
TGAATGTTGCGTGTTTAAAT+GGG - chr3_4:52435596-52435615 Msa0506240:intron 30.0%
!!! GTGTTGGATCTTTTGTTTTT+TGG - chr3_4:52435943-52435962 Msa0506240:CDS 30.0%
!!! TAGATGAAGTTTTGAACAGT+TGG + chr3_4:52436116-52436135 None:intergenic 30.0%
!!! CAAGTTATTTTAGTAATGGC+TGG - chr3_4:52436319-52436338 Msa0506240:intron 30.0%
AAACAACTGAAGTCAACAAA+CGG + chr3_4:52436380-52436399 None:intergenic 30.0%
! TCTTAATGATGCATTGATGA+AGG - chr3_4:52436747-52436766 Msa0506240:intron 30.0%
AACATACAATTTCCCCAATT+TGG - chr3_4:52436907-52436926 Msa0506240:intron 30.0%
! GTTTGTTGCAACTGATAATT+CGG + chr3_4:52436952-52436971 None:intergenic 30.0%
ATAAATAAGTCAGTAGGTCA+AGG + chr3_4:52437131-52437150 None:intergenic 30.0%
!! TTGACCTACTGACTTATTTA+TGG - chr3_4:52437130-52437149 Msa0506240:CDS 30.0%
AGTACCATAAATAAGTCAGT+AGG + chr3_4:52437137-52437156 None:intergenic 30.0%
!!! TGTTGTGGGTTTTAAAAGTT+CGG - chr3_4:52437351-52437370 Msa0506240:CDS 30.0%
CACTTTGTATCTTTGTATGT+TGG - chr3_4:52437388-52437407 Msa0506240:CDS 30.0%
TGTTGTATTGTTCCAATTGA+AGG - chr3_4:52437480-52437499 Msa0506240:five_prime_UTR 30.0%
AATAACGACGGAGAGAAAAA+CGG - chr3_4:52434638-52434657 Msa0506240:CDS 35.0%
GAATATGTTTGGAGAGATCA+TGG - chr3_4:52434730-52434749 Msa0506240:CDS 35.0%
! AAAAACCTCTTAGCACGTTT+TGG + chr3_4:52434809-52434828 None:intergenic 35.0%
CTAGATGAGCACAATGAATT+TGG + chr3_4:52435241-52435260 None:intergenic 35.0%
!! AGTATTGACATTTGGCACTT+TGG - chr3_4:52435271-52435290 Msa0506240:intron 35.0%
TTCAAGCTCTTGTATATAGC+GGG + chr3_4:52435808-52435827 None:intergenic 35.0%
GTTCAAGCTCTTGTATATAG+CGG + chr3_4:52435809-52435828 None:intergenic 35.0%
ACAAAAGATCCAACACACAA+AGG + chr3_4:52435939-52435958 None:intergenic 35.0%
! GCTGCATTTTATGATAGAAG+TGG - chr3_4:52435967-52435986 Msa0506240:intron 35.0%
TATGATAGAAGTGGCTAAGT+TGG - chr3_4:52435976-52435995 Msa0506240:intron 35.0%
! CATTGATGAAGGAAGTTGAT+AGG - chr3_4:52436758-52436777 Msa0506240:intron 35.0%
CCATATTATACGATTCAGAG+GGG + chr3_4:52436813-52436832 None:intergenic 35.0%
CCCATATTATACGATTCAGA+GGG + chr3_4:52436814-52436833 None:intergenic 35.0%
CCCTCTGAATCGTATAATAT+GGG - chr3_4:52436811-52436830 Msa0506240:intron 35.0%
TCCCATATTATACGATTCAG+AGG + chr3_4:52436815-52436834 None:intergenic 35.0%
! TTTTCAATGCCACAACATTC+AGG - chr3_4:52436868-52436887 Msa0506240:intron 35.0%
ATTGGGGAAATTGTATGTTC+TGG + chr3_4:52436906-52436925 None:intergenic 35.0%
TTTGCAACATAGCTGAGATT+TGG + chr3_4:52436984-52437003 None:intergenic 35.0%
GACATGTAGTCATCTAATGA+AGG - chr3_4:52437184-52437203 Msa0506240:CDS 35.0%
! TTTTTGCGACAAAACCACAA+GGG + chr3_4:52437297-52437316 None:intergenic 35.0%
ATGATACACATGACCAAAGA+GGG + chr3_4:52437427-52437446 None:intergenic 35.0%
CATCTTACATGTCCTTCAAT+TGG + chr3_4:52437495-52437514 None:intergenic 35.0%
AATTCGAATCAGACCGGTTA+TGG - chr3_4:52434575-52434594 Msa0506240:three_prime_UTR 40.0%
GGAACGAGTAGTAATAACGA+CGG - chr3_4:52434626-52434645 Msa0506240:CDS 40.0%
TTGATCCAAAACGTGCTAAG+AGG - chr3_4:52434801-52434820 Msa0506240:CDS 40.0%
! GTGTTGGTATTTGATGATCG+CGG - chr3_4:52435293-52435312 Msa0506240:intron 40.0%
TGAAACTACAGCAGCATCTA+TGG + chr3_4:52435654-52435673 None:intergenic 40.0%
TGTGCAGAATACTTGCAAAC+CGG - chr3_4:52435751-52435770 Msa0506240:intron 40.0%
TATACAAGAGCTTGAACGCA+AGG - chr3_4:52435812-52435831 Msa0506240:intron 40.0%
AGTTGTAGCCTCTGTTTGAA+GGG + chr3_4:52435844-52435863 None:intergenic 40.0%
GACCTGGAATAATGTCAACT+GGG + chr3_4:52435874-52435893 None:intergenic 40.0%
TGACCTGGAATAATGTCAAC+TGG + chr3_4:52435875-52435894 None:intergenic 40.0%
! AGACTAAGTTGAAACTGACC+TGG + chr3_4:52435890-52435909 None:intergenic 40.0%
CCAACACACAAAGGAATTTC+TGG + chr3_4:52435930-52435949 None:intergenic 40.0%
CCAGAAATTCCTTTGTGTGT+TGG - chr3_4:52435927-52435946 Msa0506240:CDS 40.0%
TGGTCGCAAATGCTTATACA+AGG + chr3_4:52436096-52436115 None:intergenic 40.0%
!! ATTTTTCAGAGGGACACAAC+TGG - chr3_4:52436448-52436467 Msa0506240:intron 40.0%
AATAGTAGCTACCATCTCGA+AGG + chr3_4:52436534-52436553 None:intergenic 40.0%
GATAGGCTTAAGATTGCTAC+CGG - chr3_4:52436775-52436794 Msa0506240:intron 40.0%
ATAGGCTTAAGATTGCTACC+GGG - chr3_4:52436776-52436795 Msa0506240:intron 40.0%
CCCCTCTGAATCGTATAATA+TGG - chr3_4:52436810-52436829 Msa0506240:intron 40.0%
!! AGCTGAGATTTGGTGAGAAT+TGG + chr3_4:52436974-52436993 None:intergenic 40.0%
ATGTTGCAAAACGATCAGCT+CGG - chr3_4:52436994-52437013 Msa0506240:CDS 40.0%
! CTTTTTGCGACAAAACCACA+AGG + chr3_4:52437298-52437317 None:intergenic 40.0%
! CATATTGAAGCGTGGCATTT+TGG - chr3_4:52437328-52437347 Msa0506240:CDS 40.0%
!! GATGCTTTTTGATCCCTCTT+TGG - chr3_4:52437411-52437430 Msa0506240:CDS 40.0%
GATGATACACATGACCAAAG+AGG + chr3_4:52437428-52437447 None:intergenic 40.0%
! ACGTTGGAAGAAGGTGCATT+GGG + chr3_4:52434311-52434330 None:intergenic 45.0%
! ACGGTAGTTGATTTCGGAGT+GGG + chr3_4:52434405-52434424 None:intergenic 45.0%
GGTGAAGAAGAGATCGTCTT+CGG + chr3_4:52434513-52434532 None:intergenic 45.0%
TACATTGACGTCGAGAAGCT+CGG - chr3_4:52434533-52434552 Msa0506240:three_prime_UTR 45.0%
GGTTCGAATTCGAATCAGAC+CGG - chr3_4:52434569-52434588 Msa0506240:three_prime_UTR 45.0%
ATTACTACTCGTTCCAACGC+CGG + chr3_4:52434621-52434640 None:intergenic 45.0%
CTATGTCTATGCCTCGTTCT+CGG + chr3_4:52434680-52434699 None:intergenic 45.0%
AGACATAGCTGCTCTGTTGA+TGG - chr3_4:52434692-52434711 Msa0506240:CDS 45.0%
ACGTCGACGACGAATATGTT+TGG - chr3_4:52434719-52434738 Msa0506240:CDS 45.0%
CAAAGCTCAGCGAGTTTATC+AGG + chr3_4:52434776-52434795 None:intergenic 45.0%
CTGATAAACTCGCTGAGCTT+TGG - chr3_4:52434774-52434793 Msa0506240:CDS 45.0%
AGAATCACGATGAGTTGTCG+TGG - chr3_4:52435162-52435181 Msa0506240:intron 45.0%
! GACATTTGGCACTTTGGTGT+TGG - chr3_4:52435277-52435296 Msa0506240:intron 45.0%
!!! TGATGATCGCGGTTTTGTTG+TGG - chr3_4:52435304-52435323 Msa0506240:intron 45.0%
GCGTGTTTAAATGGGATGTC+AGG - chr3_4:52435604-52435623 Msa0506240:intron 45.0%
TGCGCGTTCAAAAGAGAGAA+AGG - chr3_4:52435782-52435801 Msa0506240:intron 45.0%
GAGTTGTAGCCTCTGTTTGA+AGG + chr3_4:52435845-52435864 None:intergenic 45.0%
TGCCCAGTTGACATTATTCC+AGG - chr3_4:52435869-52435888 Msa0506240:CDS 45.0%
!! GTAATGGCTGGTATTGATGC+TGG - chr3_4:52436331-52436350 Msa0506240:intron 45.0%
! GTTGTTCCATGGATTGCAGA+CGG + chr3_4:52436504-52436523 None:intergenic 45.0%
TCTGCAATCCATGGAACAAC+AGG - chr3_4:52436504-52436523 Msa0506240:intron 45.0%
TAGGCTTAAGATTGCTACCG+GGG - chr3_4:52436777-52436796 Msa0506240:intron 45.0%
ATGCACCAGATGCAATTTGC+AGG - chr3_4:52436835-52436854 Msa0506240:intron 45.0%
TGCACCAGATGCAATTTGCA+GGG - chr3_4:52436836-52436855 Msa0506240:intron 45.0%
TTGACCCTGCAAATTGCATC+TGG + chr3_4:52436843-52436862 None:intergenic 45.0%
TGTATGTTCTGGTGACCTGA+AGG + chr3_4:52436895-52436914 None:intergenic 45.0%
AGATGGGGAGTGACCAAATT+GGG + chr3_4:52436923-52436942 None:intergenic 45.0%
ATAATTCGGCACGTCAGATG+GGG + chr3_4:52436938-52436957 None:intergenic 45.0%
GATAATTCGGCACGTCAGAT+GGG + chr3_4:52436939-52436958 None:intergenic 45.0%
TGATAATTCGGCACGTCAGA+TGG + chr3_4:52436940-52436959 None:intergenic 45.0%
TCTCACTTGCAGAGATTGAG+GGG + chr3_4:52437077-52437096 None:intergenic 45.0%
CTCTCACTTGCAGAGATTGA+GGG + chr3_4:52437078-52437097 None:intergenic 45.0%
ACTCTCACTTGCAGAGATTG+AGG + chr3_4:52437079-52437098 None:intergenic 45.0%
GTCAGTAGGTCAAGGAGTTT+AGG + chr3_4:52437123-52437142 None:intergenic 45.0%
TTAGGGATGCTCCCCAAATA+GGG - chr3_4:52437265-52437284 Msa0506240:CDS 45.0%
CACGCTTCAATATGATTGCG+TGG + chr3_4:52437322-52437341 None:intergenic 45.0%
CACGCAATCATATTGAAGCG+TGG - chr3_4:52437320-52437339 Msa0506240:CDS 45.0%
! GACGTTGGAAGAAGGTGCAT+TGG + chr3_4:52434312-52434331 None:intergenic 50.0%
CGGATGAAGACGTTGGAAGA+AGG + chr3_4:52434320-52434339 None:intergenic 50.0%
TCTTCCAACGTCTTCATCCG+CGG - chr3_4:52434320-52434339 Msa0506240:three_prime_UTR 50.0%
! GACGGTAGTTGATTTCGGAG+TGG + chr3_4:52434406-52434425 None:intergenic 50.0%
! GGGGAGACGGTAGTTGATTT+CGG + chr3_4:52434411-52434430 None:intergenic 50.0%
AGAGGTCCATAATGTCGTCG+GGG + chr3_4:52434430-52434449 None:intergenic 50.0%
GAGAGGTCCATAATGTCGTC+GGG + chr3_4:52434431-52434450 None:intergenic 50.0%
GGAGAGGTCCATAATGTCGT+CGG + chr3_4:52434432-52434451 None:intergenic 50.0%
GAGCTTCTCGACGTCAATGT+AGG + chr3_4:52434534-52434553 None:intergenic 50.0%
AAGCTCGGCGGAGTAACAAA+CGG - chr3_4:52434548-52434567 Msa0506240:three_prime_UTR 50.0%
ACCGGTTATGGTAATTGCGC+CGG - chr3_4:52434587-52434606 Msa0506240:three_prime_UTR 50.0%
ACCGGCGCAATTACCATAAC+CGG + chr3_4:52434591-52434610 None:intergenic 50.0%
AGCTCAGCGAGTTTATCAGG+AGG + chr3_4:52434773-52434792 None:intergenic 50.0%
GGTTCAGACCCTTCAAACAG+AGG - chr3_4:52435833-52435852 Msa0506240:intron 50.0%
AAGGTGTGCCTGTTGTTCCA+TGG + chr3_4:52436515-52436534 None:intergenic 50.0%
CCTGAAGGACCTGAATGTTG+TGG + chr3_4:52436880-52436899 None:intergenic 50.0%
CCACAACATTCAGGTCCTTC+AGG - chr3_4:52436877-52436896 Msa0506240:intron 50.0%
GATGGGGAGTGACCAAATTG+GGG + chr3_4:52436922-52436941 None:intergenic 50.0%
CAGATGGGGAGTGACCAAAT+TGG + chr3_4:52436924-52436943 None:intergenic 50.0%
GGGCTTGACATCAGTAGCAA+AGG - chr3_4:52437027-52437046 Msa0506240:CDS 50.0%
GGGGGTTTCAGATTTCACGA+GGG + chr3_4:52437058-52437077 None:intergenic 50.0%
AGGGGGTTTCAGATTTCACG+AGG + chr3_4:52437059-52437078 None:intergenic 50.0%
CTCACTTGCAGAGATTGAGG+GGG + chr3_4:52437076-52437095 None:intergenic 50.0%
CTTAGGGATGCTCCCCAAAT+AGG - chr3_4:52437264-52437283 Msa0506240:CDS 50.0%
TAGGGATGCTCCCCAAATAG+GGG - chr3_4:52437266-52437285 Msa0506240:CDS 50.0%
!! AAGGGTGCTTCCCCTATTTG+GGG + chr3_4:52437279-52437298 None:intergenic 50.0%
!! CAAGGGTGCTTCCCCTATTT+GGG + chr3_4:52437280-52437299 None:intergenic 50.0%
!! ACAAGGGTGCTTCCCCTATT+TGG + chr3_4:52437281-52437300 None:intergenic 50.0%
!! AAATAGGGGAAGCACCCTTG+TGG - chr3_4:52437280-52437299 Msa0506240:CDS 50.0%
!!! AGCGTGGCATTTTGGTGTTG+TGG - chr3_4:52437336-52437355 Msa0506240:CDS 50.0%
!!! GCGTGGCATTTTGGTGTTGT+GGG - chr3_4:52437337-52437356 Msa0506240:CDS 50.0%
CCATAATGTCGTCGGGGAGA+CGG + chr3_4:52434424-52434443 None:intergenic 55.0%
TTAAGGGATCGGAAGGGGAG+AGG + chr3_4:52434448-52434467 None:intergenic 55.0%
TCCCCTTCCGATCCCTTAAC+CGG - chr3_4:52434449-52434468 Msa0506240:three_prime_UTR 55.0%
ATTGACGTCGAGAAGCTCGG+CGG - chr3_4:52434536-52434555 Msa0506240:three_prime_UTR 55.0%
! TATGGTAATTGCGCCGGTGC+CGG - chr3_4:52434593-52434612 Msa0506240:three_prime_UTR 55.0%
ATGTTACGACGCCGAGAACG+AGG - chr3_4:52434666-52434685 Msa0506240:CDS 55.0%
TTGAACGCGCAGCAGATTGC+CGG + chr3_4:52435773-52435792 None:intergenic 55.0%
TTGCAGACGGAGCTTGAGCT+CGG + chr3_4:52436491-52436510 None:intergenic 55.0%
CAAGCTCCGTCTGCAATCCA+TGG - chr3_4:52436495-52436514 Msa0506240:intron 55.0%
CAACAGGCACACCTTCGAGA+TGG - chr3_4:52436520-52436539 Msa0506240:intron 55.0%
GCTTAAGATTGCTACCGGGG+AGG - chr3_4:52436780-52436799 Msa0506240:intron 55.0%
GATCAGCTCGGTCGTTTGCA+GGG - chr3_4:52437006-52437025 Msa0506240:CDS 55.0%
ATCAGCTCGGTCGTTTGCAG+GGG - chr3_4:52437007-52437026 Msa0506240:CDS 55.0%
TTCATCCGCGGCAGCGTCAA+CGG - chr3_4:52434332-52434351 Msa0506240:three_prime_UTR 60.0%
TGATTTCGGAGTGGGCGCGA+CGG + chr3_4:52434397-52434416 None:intergenic 60.0%
CCGTCTCCCCGACGACATTA+TGG - chr3_4:52434421-52434440 Msa0506240:three_prime_UTR 60.0%
GCCGGTTAAGGGATCGGAAG+GGG + chr3_4:52434453-52434472 None:intergenic 60.0%
! CGCCGGTTAAGGGATCGGAA+GGG + chr3_4:52434454-52434473 None:intergenic 60.0%
CCTTCCGATCCCTTAACCGG+CGG - chr3_4:52434452-52434471 Msa0506240:three_prime_UTR 60.0%
CTTCGGATCCGATCTCGTCG+AGG + chr3_4:52434496-52434515 None:intergenic 60.0%
AGAGGGGTTCATTGCCTCCC+CGG + chr3_4:52436797-52436816 None:intergenic 60.0%
CGATCAGCTCGGTCGTTTGC+AGG - chr3_4:52437005-52437024 Msa0506240:CDS 60.0%
GCTGCCGCGGATGAAGACGT+TGG + chr3_4:52434327-52434346 None:intergenic 65.0%
GTGGTGAGAGTGGGGTTCGC+CGG + chr3_4:52434375-52434394 None:intergenic 65.0%
! CCGCCGGTTAAGGGATCGGA+AGG + chr3_4:52434455-52434474 None:intergenic 65.0%
TCCGATCCCTTAACCGGCGG+CGG - chr3_4:52434455-52434474 Msa0506240:three_prime_UTR 65.0%
! TCCGCCGCCGGTTAAGGGAT+CGG + chr3_4:52434459-52434478 None:intergenic 65.0%
! GAGGATCCGCCGCCGGTTAA+GGG + chr3_4:52434464-52434483 None:intergenic 65.0%
ACCGCCAGCCTCGACGAGAT+CGG - chr3_4:52434485-52434504 Msa0506240:three_prime_UTR 65.0%
TCCGATCTCGTCGAGGCTGG+CGG + chr3_4:52434489-52434508 None:intergenic 65.0%
GGATCCGATCTCGTCGAGGC+TGG + chr3_4:52434492-52434511 None:intergenic 65.0%
AGACGCCGTTGACGCTGCCG+CGG + chr3_4:52434340-52434359 None:intergenic 70.0%
AGAGTGGGGTTCGCCGGCGA+CGG + chr3_4:52434369-52434388 None:intergenic 70.0%
GCGCGACGGTGGTGAGAGTG+GGG + chr3_4:52434383-52434402 None:intergenic 70.0%
GGCGCGACGGTGGTGAGAGT+GGG + chr3_4:52434384-52434403 None:intergenic 70.0%
TTTCGGAGTGGGCGCGACGG+TGG + chr3_4:52434394-52434413 None:intergenic 70.0%
! GGAGGATCCGCCGCCGGTTA+AGG + chr3_4:52434465-52434484 None:intergenic 70.0%
GATCTCGTCGAGGCTGGCGG+TGG + chr3_4:52434486-52434505 None:intergenic 70.0%
ACTCGTTCCAACGCCGGCGC+CGG + chr3_4:52434615-52434634 None:intergenic 70.0%
GGCGTCTCCACCACCGTCGC+CGG - chr3_4:52434353-52434372 Msa0506240:three_prime_UTR 75.0%
GGGCGCGACGGTGGTGAGAG+TGG + chr3_4:52434385-52434404 None:intergenic 75.0%
CTCGTCGAGGCTGGCGGTGG+AGG + chr3_4:52434483-52434502 None:intergenic 75.0%
!! AATTGCGCCGGTGCCGGCGC+CGG - chr3_4:52434599-52434618 Msa0506240:exon 75.0%
! GGGTTCGCCGGCGACGGTGG+TGG + chr3_4:52434363-52434382 None:intergenic 80.0%
! GTGGGGTTCGCCGGCGACGG+TGG + chr3_4:52434366-52434385 None:intergenic 80.0%
! GGCGGTGGAGGATCCGCCGC+CGG + chr3_4:52434471-52434490 None:intergenic 80.0%
!!! TCCAACGCCGGCGCCGGCAC+CGG + chr3_4:52434609-52434628 None:intergenic 80.0%
!!! GCCGGTGCCGGCGCCGGCGT+TGG - chr3_4:52434605-52434624 Msa0506240:exon 90.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 52434195 52437535 52434195 ID=Msa0506240;Name=Msa0506240
chr3_4 mRNA 52434195 52437535 52434195 ID=Msa0506240-mRNA-1;Parent=Msa0506240;Name=Msa0506240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=92|1|1|1|1|1|4|422|373
chr3_4 exon 52434195 52434984 52434195 ID=Msa0506240-mRNA-1:exon:11432;Parent=Msa0506240-mRNA-1
chr3_4 exon 52435189 52435273 52435189 ID=Msa0506240-mRNA-1:exon:11431;Parent=Msa0506240-mRNA-1
chr3_4 exon 52435840 52435972 52435840 ID=Msa0506240-mRNA-1:exon:11430;Parent=Msa0506240-mRNA-1
chr3_4 exon 52436908 52437535 52436908 ID=Msa0506240-mRNA-1:exon:11429;Parent=Msa0506240-mRNA-1
chr3_4 five_prime_UTR 52437444 52437535 52437444 ID=Msa0506240-mRNA-1:five_prime_utr;Parent=Msa0506240-mRNA-1
chr3_4 CDS 52436908 52437443 52436908 ID=Msa0506240-mRNA-1:cds;Parent=Msa0506240-mRNA-1
chr3_4 CDS 52435840 52435972 52435840 ID=Msa0506240-mRNA-1:cds;Parent=Msa0506240-mRNA-1
chr3_4 CDS 52435189 52435273 52435189 ID=Msa0506240-mRNA-1:cds;Parent=Msa0506240-mRNA-1
chr3_4 CDS 52434617 52434984 52434617 ID=Msa0506240-mRNA-1:cds;Parent=Msa0506240-mRNA-1
chr3_4 three_prime_UTR 52434195 52434616 52434195 ID=Msa0506240-mRNA-1:three_prime_utr;Parent=Msa0506240-mRNA-1
Gene Sequence

>Msa0506240

ATGGCAACACAAATGCAAGATCCCAATGCACCTTCTTCCAACGTCTTCATCCGCGGCAGCGTCAACGGCGTCTCCACCACCGTCGCCGGCGAACCCCACTCTCACCACCGTCGCGCCCACTCCGAAATCAACTACCGTCTCCCCGACGACATTATGGACCTCTCCCCTTCCGATCCCTTAACCGGCGGCGGATCCTCCACCGCCAGCCTCGACGAGATCGGATCCGAAGACGATCTCTTCTTCACCTACATTGACGTCGAGAAGCTCGGCGGAGTAACAAACGGTTCGAATTCGAATCAGACCGGTTATGGTAATTGCGCCGGTGCCGGCGCCGGCGTTGGAACGAGTAGTAATAACGACGGAGAGAAAAACGGAAACGATGTTACGACGCCGAGAACGAGGCATAGACATAGCTGCTCTGTTGATGGATTAACGTCGACGACGAATATGTTTGGAGAGATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAACTCGCTGAGCTTTGGACTATTGATCCAAAACGTGCTAAGAGAATACTTGCAAACCGGCAATCTGCTGCGCGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAGCTTGAACGCAAGGTTCAGACCCTTCAAACAGAGGCTACAACTCTCTCTGCCCAGTTGACATTATTCCAGAGGGACACAACTGGTCTGAGTACTGAAAATACCGAGCTCAAGCTCCGTCTGCAATCCATGGAACAACAGGCACACCTTCGAGATGCTCTTAATGATGCATTGATGAAGGAAGTTGATAGGCTTAAGATTGCTACCGGGGAGGCAATGAACCCCTCTGAATCGTATAATATGGGAATGCACCAGATGCAATTTGCAGGGTCAAATTTCTTTTCAATGCCACAACATTCAGGTCCTTCAGGTCACCAGAACATACAATTTCCCCAATTTGGTCACTCCCCATCTGACGTGCCGAATTATCAGTTGCAACAAACCAATTCTCACCAAATCTCAGCTATGTTGCAAAACGATCAGCTCGGTCGTTTGCAGGGGCTTGACATCAGTAGCAAAGGATCAACCCTCGTGAAATCTGAAACCCCCTCAATCTCTGCAAGTGAGAGTAGCACTACATTTTGA
Protein sequence

>Msa0506240

MATQMQDPNAPSSNVFIRGSVNGVSTTVAGEPHSHHRRAHSEINYRLPDDIMDLSPSDPLTGGGSSTASLDEIGSEDDLFFTYIDVEKLGGVTNGSNSNQTGYGNCAGAGAGVGTSSNNDGEKNGNDVTTPRTRHRHSCSVDGLTSTTNMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQSMEQQAHLRDALNDALMKEVDRLKIATGEAMNPSESYNMGMHQMQFAGSNFFSMPQHSGPSGHQNIQFPQFGHSPSDVPNYQLQQTNSHQISAMLQNDQLGRLQGLDISSKGSTLVKSETPSISASESSTTF*