AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0510640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510640 MtrunA17_Chr3g0144271 94.186 172 10 0 1 172 1 172 2.99e-116 344
Msa0510640 MtrunA17_Chr3g0144271 87.736 212 12 6 165 373 226 426 8.59e-113 335
Msa0510640 MtrunA17_Chr2g0316971 71.975 157 38 3 23 176 23 176 2.88e-76 240
Msa0510640 MtrunA17_Chr1g0147421 62.500 176 59 2 6 177 6 178 1.74e-74 235
Msa0510640 MtrunA17_Chr3g0139331 63.975 161 54 2 20 180 8 164 8.01e-72 228
Msa0510640 MtrunA17_Chr6g0453451 49.804 255 109 8 1 254 1 237 9.60e-71 224
Msa0510640 MtrunA17_Chr6g0484441 66.456 158 45 4 20 176 2 152 2.88e-70 223
Msa0510640 MtrunA17_Chr7g0253011 51.101 227 94 7 23 237 17 238 9.72e-69 221
Msa0510640 MtrunA17_Chr4g0060931 63.006 173 55 5 7 176 2 168 1.14e-68 220
Msa0510640 MtrunA17_Chr3g0091921 63.743 171 51 5 8 176 6 167 1.78e-68 218
Msa0510640 MtrunA17_Chr6g0461661 62.500 160 48 3 23 176 18 171 5.21e-67 216
Msa0510640 MtrunA17_Chr7g0217721 55.779 199 66 6 12 195 7 198 7.39e-66 212
Msa0510640 MtrunA17_Chr2g0312321 56.604 159 64 2 20 178 8 161 6.49e-63 203
Msa0510640 MtrunA17_Chr1g0183741 53.939 165 70 2 23 187 10 168 1.68e-61 199
Msa0510640 MtrunA17_Chr7g0261411 39.677 310 155 10 23 330 10 289 4.11e-60 196
Msa0510640 MtrunA17_Chr7g0217711 59.756 164 57 4 12 169 7 167 2.53e-59 190
Msa0510640 MtrunA17_Chr2g0309891 57.051 156 62 3 23 176 6 158 1.07e-55 186
Msa0510640 MtrunA17_Chr7g0263931 51.744 172 79 2 14 182 2 172 2.45e-55 184
Msa0510640 MtrunA17_Chr4g0018391 54.487 156 62 4 23 175 7 156 3.05e-55 184
Msa0510640 MtrunA17_Chr6g0481091 45.833 216 96 8 22 225 5 211 6.12e-55 181
Msa0510640 MtrunA17_Chr5g0405211 55.346 159 62 4 20 175 5 157 7.27e-55 184
Msa0510640 MtrunA17_Chr4g0056541 55.769 156 60 4 23 175 7 156 1.77e-54 183
Msa0510640 MtrunA17_Chr4g0017921 50.000 188 79 5 22 206 7 182 2.39e-54 182
Msa0510640 MtrunA17_Chr2g0309331 51.462 171 75 4 20 187 7 172 3.68e-54 182
Msa0510640 MtrunA17_Chr8g0372121 54.717 159 63 4 20 175 3 155 3.91e-54 181
Msa0510640 MtrunA17_Chr5g0398971 54.140 157 63 5 23 175 7 158 4.91e-53 179
Msa0510640 MtrunA17_Chr2g0318101 47.826 184 84 3 11 183 2 184 1.04e-52 178
Msa0510640 MtrunA17_Chr8g0346001 48.901 182 67 6 23 182 15 192 3.85e-52 179
Msa0510640 MtrunA17_Chr1g0200561 51.829 164 60 5 20 175 16 168 1.78e-51 175
Msa0510640 MtrunA17_Chr5g0417791 51.282 156 70 3 23 175 3 155 4.21e-51 171
Msa0510640 MtrunA17_Chr8g0384721 52.830 159 68 3 23 178 7 161 5.03e-51 172
Msa0510640 MtrunA17_Chr7g0214071 49.714 175 79 5 16 188 8 175 1.02e-50 170
Msa0510640 MtrunA17_Chr4g0047841 47.727 176 69 3 23 176 15 189 1.06e-50 173
Msa0510640 MtrunA17_Chr3g0124761 50.932 161 73 3 19 177 3 159 1.45e-50 171
Msa0510640 MtrunA17_Chr7g0252971 48.503 167 75 4 20 176 5 170 5.27e-50 171
Msa0510640 MtrunA17_Chr4g0042561 52.564 156 68 4 23 175 9 161 1.40e-49 167
Msa0510640 MtrunA17_Chr2g0326361 48.503 167 82 2 18 181 9 174 2.19e-49 169
Msa0510640 MtrunA17_Chr3g0109821 53.846 156 67 4 23 176 6 158 2.34e-49 176
Msa0510640 MtrunA17_Chr3g0130731 50.920 163 74 3 18 178 2 160 2.41e-49 167
Msa0510640 MtrunA17_Chr8g0361731 39.919 248 113 6 17 251 8 232 9.86e-49 169
Msa0510640 MtrunA17_Chr2g0318081 47.929 169 84 3 8 176 1 165 1.30e-48 167
Msa0510640 MtrunA17_Chr5g0417001 49.711 173 78 4 11 176 3 173 3.57e-48 167
Msa0510640 MtrunA17_Chr5g0433781 42.616 237 112 10 23 253 6 224 1.36e-47 171
Msa0510640 MtrunA17_Chr8g0359921 49.091 165 74 4 23 183 14 172 1.45e-47 164
Msa0510640 MtrunA17_Chr6g0453131 46.893 177 80 4 23 191 15 185 1.93e-47 166
Msa0510640 MtrunA17_Chr4g0076731 50.327 153 71 3 25 177 56 203 9.31e-46 162
Msa0510640 MtrunA17_Chr5g0400461 50.602 166 69 6 23 181 6 165 4.38e-45 158
Msa0510640 MtrunA17_Chr4g0054791 47.647 170 83 5 23 188 6 173 5.13e-44 154
Msa0510640 MtrunA17_Chr3g0092671 49.045 157 70 5 25 177 7 157 7.06e-44 159
Msa0510640 MtrunA17_Chr8g0364791 39.091 220 116 7 23 231 6 218 4.83e-43 155
Msa0510640 MtrunA17_Chr1g0197361 46.452 155 77 3 25 177 10 160 8.14e-43 157
Msa0510640 MtrunA17_Chr4g0038751 43.258 178 82 6 2 176 1 162 9.12e-43 150
Msa0510640 MtrunA17_Chr5g0442771 44.379 169 84 4 16 175 11 178 1.23e-42 150
Msa0510640 MtrunA17_Chr5g0428991 49.367 158 74 4 23 178 25 178 1.33e-42 157
Msa0510640 MtrunA17_Chr3g0128151 41.667 204 109 6 23 220 22 221 1.94e-42 156
Msa0510640 MtrunA17_Chr1g0201021 51.282 156 68 6 25 177 21 171 4.81e-42 154
Msa0510640 MtrunA17_Chr3g0128111 41.089 202 110 5 26 225 45 239 5.38e-42 147
Msa0510640 MtrunA17_Chr3g0113001 64.545 110 33 3 69 175 10 116 1.67e-41 147
Msa0510640 MtrunA17_Chr3g0130101 45.161 155 79 4 25 177 9 159 1.89e-41 149
Msa0510640 MtrunA17_Chr8g0384201 44.586 157 81 4 23 177 6 158 3.86e-41 150
Msa0510640 MtrunA17_Chr2g0311651 41.477 176 89 4 25 187 24 198 3.32e-40 144
Msa0510640 MtrunA17_Chr1g0197351 48.750 160 72 4 23 175 42 198 2.95e-39 145
Msa0510640 MtrunA17_Chr2g0311661 40.341 176 91 4 25 187 23 197 4.51e-39 140
Msa0510640 MtrunA17_Chr4g0026141 43.114 167 88 3 20 180 2 167 3.34e-37 135
Msa0510640 MtrunA17_Chr8g0385991 41.212 165 87 4 23 183 14 172 1.50e-36 132
Msa0510640 MtrunA17_Chr8g0345671 36.842 228 129 6 23 242 11 231 2.66e-35 133
Msa0510640 MtrunA17_Chr2g0321631 43.558 163 80 5 24 177 5 164 1.14e-34 128
Msa0510640 MtrunA17_Chr3g0131911 43.293 164 75 5 23 175 14 170 9.75e-34 125
Msa0510640 MtrunA17_Chr8g0345691 40.571 175 95 4 23 195 12 179 1.99e-33 128
Msa0510640 MtrunA17_Chr3g0113031 56.863 102 37 3 85 181 1 100 5.45e-32 121
Msa0510640 MtrunA17_Chr8g0345711 44.186 129 69 2 23 149 12 139 3.46e-29 111
Msa0510640 MtrunA17_Chr7g0266701 39.264 163 89 6 23 176 4 165 6.21e-29 113
Msa0510640 MtrunA17_Chr2g0321741 43.939 132 57 5 56 186 24 139 3.61e-28 113
Msa0510640 MtrunA17_Chr8g0345701 39.860 143 67 4 23 149 7 146 4.79e-27 105
Msa0510640 MtrunA17_Chr4g0050701 36.364 165 91 3 23 182 11 166 1.21e-26 105
Msa0510640 MtrunA17_Chr8g0345731 42.748 131 71 3 23 149 24 154 3.27e-26 103
Msa0510640 MtrunA17_Chr7g0243371 51.220 82 40 0 77 158 17 98 6.27e-25 98.2
Msa0510640 MtrunA17_Chr8g0345721 31.111 180 87 3 6 149 13 191 6.61e-24 98.2
Msa0510640 MtrunA17_Chr8g0345741 35.172 145 85 5 34 176 2 139 3.31e-21 89.4
Msa0510640 MtrunA17_Chr8g0384351 40.000 160 70 8 23 182 10 143 1.02e-20 88.6
Msa0510640 MtrunA17_Chr3g0130321 31.875 160 93 3 23 173 7 159 1.13e-17 80.9
Msa0510640 MtrunA17_Chr7g0251661 34.091 132 80 4 20 149 7 133 3.27e-17 78.2
Msa0510640 MtrunA17_Chr7g0251651 31.544 149 92 6 3 149 1 141 1.72e-15 74.3
Msa0510640 MtrunA17_Chr3g0113011 55.000 60 25 2 12 70 7 65 1.79e-14 67.8
Msa0510640 MtrunA17_Chr7g0251671 32.090 134 80 5 20 149 7 133 1.88e-14 70.5
Msa0510640 MtrunA17_Chr3g0113041 50.000 60 28 2 12 70 7 65 7.76e-12 60.5
Msa0510640 MtrunA17_Chr4g0040541 32.886 149 79 6 22 153 47 191 5.10e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510640 AT1G76420.1 74.725 182 40 4 1 181 1 177 4.30e-95 287
Msa0510640 AT2G24430.2 64.881 168 54 3 11 176 2 166 4.45e-76 238
Msa0510640 AT2G24430.1 64.881 168 54 3 11 176 2 166 4.45e-76 238
Msa0510640 AT5G61430.1 57.826 230 74 10 7 221 2 223 1.73e-75 237
Msa0510640 AT3G15170.1 54.545 209 87 4 18 221 15 220 2.57e-73 231
Msa0510640 AT3G18400.1 68.790 157 44 3 20 176 2 153 8.42e-73 229
Msa0510640 AT5G53950.1 67.702 161 46 3 19 176 13 170 2.36e-72 230
Msa0510640 AT5G07680.1 60.101 198 65 8 15 204 8 199 3.06e-71 226
Msa0510640 AT5G39610.1 68.153 157 46 3 23 178 20 173 3.37e-71 224
Msa0510640 AT5G07680.2 61.376 189 60 7 23 204 3 185 1.63e-70 223
Msa0510640 AT5G18270.1 49.225 258 95 10 1 248 1 232 4.34e-70 223
Msa0510640 AT5G18270.2 49.225 258 95 10 1 248 1 232 6.26e-70 223
Msa0510640 AT3G29035.1 63.529 170 55 4 6 174 10 173 3.97e-68 218
Msa0510640 AT3G04060.1 64.331 157 49 4 23 176 20 172 1.49e-67 217
Msa0510640 AT1G56010.2 45.714 245 115 8 20 259 16 247 1.93e-64 208
Msa0510640 AT3G12977.1 54.487 156 68 2 20 175 15 167 2.34e-60 196
Msa0510640 AT4G28530.1 51.786 168 61 2 23 175 10 172 3.97e-57 190
Msa0510640 AT5G62380.2 55.414 157 59 5 23 175 7 156 6.41e-56 187
Msa0510640 AT5G62380.1 55.414 157 59 5 23 175 7 156 6.41e-56 187
Msa0510640 AT1G33280.1 44.395 223 104 8 22 239 7 214 2.41e-55 184
Msa0510640 AT4G36160.1 56.024 166 61 6 23 182 10 169 3.50e-55 186
Msa0510640 AT4G36160.3 56.024 166 61 6 23 182 10 169 3.50e-55 186
Msa0510640 AT4G36160.2 56.024 166 61 6 23 182 14 173 3.62e-55 186
Msa0510640 AT2G46770.1 52.381 168 62 4 23 175 16 180 9.65e-55 184
Msa0510640 AT2G18060.3 53.333 165 66 5 23 182 9 167 1.10e-54 184
Msa0510640 AT2G18060.1 53.333 165 66 5 23 182 9 167 1.10e-54 184
Msa0510640 AT1G12260.2 55.414 157 59 5 23 175 7 156 2.20e-54 182
Msa0510640 AT1G12260.1 55.414 157 59 5 23 175 7 156 3.54e-54 184
Msa0510640 AT4G10350.1 56.051 157 62 4 22 175 8 160 4.46e-54 182
Msa0510640 AT1G62700.1 55.128 156 61 4 23 175 7 156 1.84e-53 182
Msa0510640 AT1G62700.2 55.128 156 61 4 23 175 7 156 1.84e-53 182
Msa0510640 AT1G69490.1 50.595 168 77 3 16 180 2 166 2.47e-53 177
Msa0510640 AT1G61110.1 49.143 175 76 4 23 186 16 188 3.41e-53 179
Msa0510640 AT4G27410.2 52.096 167 73 5 23 187 14 175 3.96e-53 178
Msa0510640 AT1G71930.2 51.829 164 60 5 20 175 6 158 7.38e-53 178
Msa0510640 AT1G71930.1 51.829 164 60 5 20 175 6 158 7.38e-53 178
Msa0510640 AT5G66300.1 55.063 158 61 5 22 175 11 162 1.18e-52 177
Msa0510640 AT3G17730.1 54.430 158 66 5 22 177 5 158 1.99e-52 174
Msa0510640 AT5G08790.1 53.049 164 69 3 18 177 2 161 2.15e-52 176
Msa0510640 AT3G61910.1 47.727 176 74 5 23 183 11 183 4.47e-52 176
Msa0510640 AT5G63790.1 53.659 164 68 3 18 177 45 204 6.89e-52 175
Msa0510640 AT5G63790.2 53.659 164 68 3 18 177 55 214 7.65e-52 176
Msa0510640 AT1G79580.3 53.704 162 64 5 23 180 17 171 1.59e-51 176
Msa0510640 AT1G79580.5 53.704 162 64 5 23 180 17 171 1.59e-51 176
Msa0510640 AT1G79580.4 53.704 162 64 5 23 180 17 171 1.59e-51 176
Msa0510640 AT1G79580.2 53.704 162 64 5 23 180 17 171 1.59e-51 176
Msa0510640 AT1G79580.1 53.704 162 64 5 23 180 17 171 1.59e-51 176
Msa0510640 AT5G39820.1 45.178 197 82 6 1 176 1 192 2.27e-51 175
Msa0510640 AT1G32770.1 50.909 165 66 4 23 175 16 177 3.58e-51 175
Msa0510640 AT1G01720.1 44.286 210 101 7 23 224 7 208 6.47e-51 172
Msa0510640 AT5G61430.2 58.788 165 48 8 72 221 1 160 7.54e-51 171
Msa0510640 AT3G03200.1 55.769 156 64 4 22 175 5 157 8.12e-51 177
Msa0510640 AT1G77450.1 50.299 167 75 4 23 185 10 172 2.48e-50 169
Msa0510640 AT3G04070.2 48.824 170 75 4 17 176 4 171 2.75e-50 172
Msa0510640 AT5G17260.1 54.839 155 65 4 23 175 6 157 3.36e-50 175
Msa0510640 AT5G46590.1 50.909 165 77 3 23 185 6 168 2.22e-49 168
Msa0510640 AT5G04410.1 53.503 157 67 4 23 177 9 161 3.92e-49 174
Msa0510640 AT1G65910.1 52.866 157 68 4 23 177 6 158 5.71e-49 175
Msa0510640 AT4G27410.3 47.283 184 73 6 23 187 14 192 1.51e-48 167
Msa0510640 AT3G15500.1 52.564 156 64 4 23 175 14 162 3.25e-48 166
Msa0510640 AT3G10480.1 44.928 207 100 6 23 220 27 228 3.38e-48 169
Msa0510640 AT2G43000.1 46.784 171 87 3 14 184 10 176 4.52e-48 164
Msa0510640 AT3G10500.1 51.592 157 70 4 23 177 9 161 6.96e-48 171
Msa0510640 AT2G02450.1 52.941 153 67 4 25 177 53 200 7.75e-48 166
Msa0510640 AT2G02450.2 52.941 153 67 4 25 177 53 200 8.39e-48 167
Msa0510640 AT1G54330.1 56.774 155 58 6 23 175 6 153 9.16e-48 164
Msa0510640 AT3G04070.1 44.624 186 75 4 17 176 4 187 1.01e-47 166
Msa0510640 AT1G26870.1 47.368 171 81 2 14 176 7 176 1.07e-47 167
Msa0510640 AT1G52890.1 52.564 156 64 4 23 175 14 162 1.11e-47 164
Msa0510640 AT3G15510.1 41.284 218 108 4 27 233 21 229 2.22e-47 165
Msa0510640 AT3G10490.1 50.318 157 71 4 23 176 27 179 4.20e-47 160
Msa0510640 AT3G10480.2 44.928 207 99 7 23 220 27 227 7.79e-47 166
Msa0510640 AT4G35580.1 47.590 166 79 5 21 183 7 167 6.48e-46 164
Msa0510640 AT3G10490.2 50.318 157 71 4 23 176 27 179 7.68e-46 163
Msa0510640 AT4G35580.2 47.590 166 79 5 21 183 7 167 9.33e-46 164
Msa0510640 AT4G35580.3 47.590 166 79 5 21 183 7 167 9.58e-46 164
Msa0510640 AT5G46590.2 54.110 146 63 3 23 166 6 149 1.10e-45 158
Msa0510640 AT5G13180.1 52.288 153 67 3 23 175 14 160 2.54e-45 156
Msa0510640 AT1G33060.1 50.318 157 72 4 21 175 22 174 5.13e-45 164
Msa0510640 AT1G33060.2 50.318 157 72 4 21 175 22 174 5.39e-45 164
Msa0510640 AT4G17980.1 50.000 160 68 5 23 175 6 160 2.51e-43 151
Msa0510640 AT4G17980.2 50.000 160 68 5 23 175 6 160 3.05e-43 152
Msa0510640 AT2G17040.1 46.104 154 73 4 25 176 8 153 4.05e-43 151
Msa0510640 AT3G10480.3 36.042 283 128 8 23 261 27 300 6.88e-43 156
Msa0510640 AT5G24590.2 46.061 165 82 5 14 175 4 164 9.88e-43 155
Msa0510640 AT1G56010.1 45.078 193 88 8 72 259 1 180 1.21e-42 149
Msa0510640 AT3G49530.2 43.011 186 95 6 23 201 13 194 2.22e-42 153
Msa0510640 AT1G34190.1 50.000 158 67 6 25 177 18 168 7.07e-42 154
Msa0510640 AT3G49530.1 48.077 156 74 5 23 175 13 164 7.80e-42 152
Msa0510640 AT1G34180.3 48.387 155 74 5 25 177 18 168 1.14e-41 152
Msa0510640 AT1G52880.1 49.057 159 71 4 27 176 21 178 2.52e-41 148
Msa0510640 AT2G33480.2 48.750 160 73 4 23 182 15 165 6.61e-41 145
Msa0510640 AT1G34180.1 48.387 155 74 5 25 177 18 168 7.96e-41 151
Msa0510640 AT3G12910.1 43.575 179 86 6 16 180 13 190 1.50e-40 145
Msa0510640 AT2G33480.1 48.125 160 76 4 23 182 15 167 1.72e-40 144
Msa0510640 AT2G27300.1 43.478 184 83 8 22 196 13 184 4.61e-40 145
Msa0510640 AT1G32870.1 50.314 159 71 6 22 177 9 162 6.71e-40 148
Msa0510640 AT1G32870.2 50.314 159 71 6 22 177 9 162 7.45e-40 148
Msa0510640 AT1G34180.4 44.910 167 74 5 25 177 18 180 8.25e-40 147
Msa0510640 AT1G32870.3 50.314 159 71 6 22 177 45 198 1.32e-39 148
Msa0510640 AT5G09330.5 44.586 157 81 5 23 177 6 158 3.16e-39 146
Msa0510640 AT5G09330.2 44.586 157 81 5 23 177 6 158 3.16e-39 146
Msa0510640 AT5G09330.4 44.586 157 81 5 23 177 6 158 3.16e-39 146
Msa0510640 AT5G09330.3 44.586 157 81 5 23 177 6 158 3.16e-39 146
Msa0510640 AT5G09330.1 44.586 157 81 5 23 177 6 158 3.16e-39 146
Msa0510640 AT1G32510.1 46.584 161 78 3 23 176 6 165 3.70e-39 141
Msa0510640 AT1G34180.2 44.910 167 74 5 25 177 18 180 4.00e-39 147
Msa0510640 AT3G12977.2 56.075 107 45 1 69 175 10 114 4.66e-39 139
Msa0510640 AT5G64060.1 41.401 157 86 4 23 177 6 158 8.64e-37 137
Msa0510640 AT4G28530.2 49.219 128 50 1 23 135 10 137 1.79e-35 132
Msa0510640 AT4G10350.2 56.364 110 42 3 69 175 7 113 5.11e-34 127
Msa0510640 AT5G22290.1 42.553 141 77 3 25 164 23 160 7.11e-33 125
Msa0510640 AT3G44290.2 41.104 163 81 6 25 185 16 165 7.51e-32 120
Msa0510640 AT3G44290.1 41.104 163 81 6 25 185 16 165 1.69e-31 122
Msa0510640 AT5G04395.1 42.466 146 69 3 20 151 25 169 2.73e-31 117
Msa0510640 AT3G44350.2 39.634 164 90 3 23 180 5 165 6.10e-30 115
Msa0510640 AT4G01550.1 35.025 197 100 7 26 213 7 184 6.19e-29 117
Msa0510640 AT4G01520.1 34.161 161 88 5 24 176 5 155 1.05e-26 108
Msa0510640 AT5G22380.1 37.267 161 94 4 26 180 8 167 1.84e-26 106
Msa0510640 AT2G33480.3 49.057 106 51 2 77 182 8 110 1.85e-26 105
Msa0510640 AT3G44350.1 41.791 134 69 3 23 150 5 135 2.58e-25 100
Msa0510640 AT4G01540.2 33.962 159 87 5 26 176 7 155 3.07e-25 106
Msa0510640 AT4G01540.4 33.962 159 87 5 26 176 7 155 3.20e-25 105
Msa0510640 AT4G01540.3 33.962 159 87 5 26 176 7 155 4.36e-25 105
Msa0510640 AT4G01540.1 33.962 159 87 5 26 176 7 155 4.40e-25 106
Msa0510640 AT3G04420.2 36.774 155 87 5 24 175 4 150 1.08e-23 99.8
Msa0510640 AT3G04420.1 36.774 155 87 5 24 175 4 150 2.21e-23 100
Msa0510640 AT5G64530.1 35.542 166 81 4 23 175 3 155 5.75e-23 95.1
Msa0510640 AT2G18060.2 54.217 83 31 3 102 182 2 79 8.98e-23 97.1
Msa0510640 AT2G43000.2 46.000 100 52 1 85 184 1 98 9.89e-23 95.1
Msa0510640 AT3G10490.4 55.000 80 34 1 97 176 2 79 1.49e-22 97.8
Msa0510640 AT3G10490.3 55.000 80 34 1 97 176 2 79 1.49e-22 97.8
Msa0510640 AT1G02230.1 39.474 152 79 7 24 167 4 150 1.59e-22 97.8
Msa0510640 AT1G02250.1 35.404 161 91 7 24 180 4 155 3.71e-22 96.7
Msa0510640 AT5G64530.2 38.760 129 66 3 23 151 3 118 7.96e-22 91.3
Msa0510640 AT1G01010.1 31.120 241 124 11 26 254 6 216 6.24e-21 94.0
Msa0510640 AT1G02220.1 35.862 145 84 5 24 164 4 143 4.49e-18 85.5
Msa0510640 AT5G50820.1 36.806 144 58 8 23 153 17 140 6.47e-15 73.2
Msa0510640 AT5G22290.2 48.387 62 30 1 103 164 2 61 2.23e-14 72.4
Msa0510640 AT5G14000.1 30.189 159 100 6 23 179 15 164 4.73e-14 70.9
Msa0510640 AT3G55210.1 29.697 165 94 6 23 173 11 167 7.57e-14 71.6
Msa0510640 AT3G56530.1 29.221 154 102 4 22 173 51 199 1.05e-13 71.6
Msa0510640 AT5G14000.2 32.824 131 81 4 23 151 15 140 3.37e-13 67.4
Msa0510640 AT3G04430.1 31.915 141 79 5 29 158 6 140 2.34e-12 65.9
Msa0510640 AT1G28470.1 30.588 170 93 7 23 176 77 237 8.48e-11 62.8

Find 106 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTAAATGTCCTTGAATT+TGG 0.113855 3_4:+59750050 None:intergenic
TGGATTATTATTGTTGTTTC+TGG 0.174409 3_4:+59749859 None:intergenic
CTGCTACAAATGCTGAATTT+AGG 0.233006 3_4:-59749586 Msa0510640:CDS
TATTGTCAATAATCCATCTT+AGG 0.255982 3_4:+59749705 None:intergenic
CTGCAGTAGTAGATCCCTTT+TGG 0.256195 3_4:-59750756 Msa0510640:CDS
GTGAGAGTAATTGGTCATTT+TGG 0.260408 3_4:+59749945 None:intergenic
CTCCATCTCCACAGGGAATA+AGG 0.266636 3_4:+59749655 None:intergenic
AAGGTCTACCACCTGGTTTC+AGG 0.277471 3_4:-59751401 Msa0510640:CDS
TGGAATGGTCTGCTGCTTCA+TGG 0.293699 3_4:+59749799 None:intergenic
TGCAGGATATTTCATAAATC+AGG 0.304192 3_4:-59750094 Msa0510640:CDS
TCAAATAAAGCTTAGCTAAC+TGG 0.311124 3_4:+59749327 None:intergenic
TATGAGAATGTGAGAGTAAT+TGG 0.314718 3_4:+59749936 None:intergenic
CTCCAAATTCAAGGACATTT+AGG 0.315142 3_4:-59750052 Msa0510640:CDS
AACCTTAGAAGCCAAATAAA+AGG 0.317144 3_4:+59751350 None:intergenic
GAGCAACAAGTGCTGGTTAC+TGG 0.324307 3_4:-59750811 Msa0510640:CDS
TGCTACAAATGCTGAATTTA+GGG 0.334843 3_4:-59749585 Msa0510640:CDS
GAGTGTAGAGTCTACCTTGC+AGG 0.354307 3_4:+59750619 None:intergenic
ATTAAATTTGACAGGAAGAG+TGG 0.367388 3_4:-59750123 Msa0510640:intron
TACAAAATTATTTATGCTAC+AGG 0.384376 3_4:+59749368 None:intergenic
GTCCTATGGGAATAGATTCT+TGG 0.388808 3_4:-59749523 Msa0510640:CDS
GCTGGTTACTGGAAAGCAAC+TGG 0.394693 3_4:-59750800 Msa0510640:CDS
TGTGAGCCATGGGAACTTCC+AGG 0.411730 3_4:-59751273 Msa0510640:intron
CTCGTGGTGAAAAGACCAAA+TGG 0.412457 3_4:-59750694 Msa0510640:CDS
ATTGTGATTGTGATTGTGAT+TGG 0.418800 3_4:+59749747 None:intergenic
CATGATCTGATTGCATTCTC+AGG 0.420966 3_4:-59749611 Msa0510640:CDS
AGTTTAGACTTTAGACAAGT+TGG 0.421459 3_4:+59749492 None:intergenic
AGTAAAGGAGGAGGAGTAGA+TGG 0.441854 3_4:-59749545 Msa0510640:CDS
CTGTTTGTTCTAAGCCCGGT+TGG 0.442926 3_4:+59750833 None:intergenic
CTCCTTATTCCCTGTGGAGA+TGG 0.444680 3_4:-59749657 Msa0510640:CDS
ATGATGCTCTTAACCTAAGA+TGG 0.450839 3_4:-59749718 Msa0510640:CDS
GTTTAGACTTTAGACAAGTT+GGG 0.454126 3_4:+59749493 None:intergenic
GTGCGCAGAAATGGCAAAGA+TGG 0.456021 3_4:-59750900 Msa0510640:intron
TTGAAGAGTAGTTCTGAAGA+TGG 0.457504 3_4:+59749839 None:intergenic
GTACTCATGCATGACCCATT+TGG 0.462977 3_4:+59750679 None:intergenic
TGTTTGTTCTAAGCCCGGTT+GGG 0.465037 3_4:+59750834 None:intergenic
TGATCATTGAAAAGGAAGGT+TGG 0.466892 3_4:+59749891 None:intergenic
ACGGATCGGTATGTAATTGT+TGG 0.467014 3_4:-59749236 None:intergenic
AGGAAGAGTGGGTGATATGC+AGG 0.467215 3_4:-59750111 Msa0510640:CDS
GAAAAGGAAGGTTGGAATGA+AGG 0.469309 3_4:+59749899 None:intergenic
ATCTCCATCTCCATCTCCAC+AGG 0.470024 3_4:+59749647 None:intergenic
GGGTCTTCTTCATCCCCAAA+AGG 0.475040 3_4:+59750741 None:intergenic
TGCTCTGTTTGTTCTAAGCC+CGG 0.476611 3_4:+59750829 None:intergenic
CCCTTCCTTTGTAGAAAACA+AGG 0.478110 3_4:+59750720 None:intergenic
GTTGCAAGTAAAGGTGGTGT+AGG 0.481910 3_4:+59749989 None:intergenic
AGAGACAGAAAATACCCAAC+CGG 0.485624 3_4:-59750848 Msa0510640:CDS
AATTCACTACTCCAAATTCA+AGG 0.492982 3_4:-59750061 Msa0510640:CDS
AGGAGGAGTAGATGGTCCTA+TGG 0.494273 3_4:-59749537 Msa0510640:CDS
AAAAGTGATGAGAGTGTAAA+CGG 0.494516 3_4:+59750657 None:intergenic
AAGGTTGGAATGAAGGCAAT+GGG 0.499808 3_4:+59749906 None:intergenic
TAATGAGTTCTTCATCAGTT+GGG 0.509577 3_4:+59751373 None:intergenic
GTAATGAGTTCTTCATCAGT+TGG 0.518253 3_4:+59751372 None:intergenic
GCAGGATATTTCATAAATCA+GGG 0.520833 3_4:-59750093 Msa0510640:CDS
AATGAATTAGTTGCAAGTAA+AGG 0.523374 3_4:+59749980 None:intergenic
ACAAACAGAGCAACAAGTGC+TGG 0.530692 3_4:-59750818 Msa0510640:CDS
ATTATTATTGTTGTTTCTGG+TGG 0.531495 3_4:+59749862 None:intergenic
GCAAGTAAAGGTGGTGTAGG+AGG 0.532204 3_4:+59749992 None:intergenic
ATGACAATTATTAACAGTAA+AGG 0.548369 3_4:-59749560 Msa0510640:CDS
GGTCTTCTTCATCCCCAAAA+GGG 0.552052 3_4:+59750742 None:intergenic
TTAAATTTGACAGGAAGAGT+GGG 0.555158 3_4:-59750122 Msa0510640:intron
CCCATGGCTCACATCTATTG+AGG 0.558723 3_4:+59751283 None:intergenic
ACCTCAATAGATGTGAGCCA+TGG 0.559776 3_4:-59751284 Msa0510640:CDS
AGTCTAAACTACCTAGCAGT+AGG 0.561121 3_4:-59749479 Msa0510640:three_prime_UTR
TCGTGGTGAAAAGACCAAAT+GGG 0.562515 3_4:-59750693 Msa0510640:CDS
AAGCTTAGCTAACTGGACAT+AGG 0.562681 3_4:+59749334 None:intergenic
CTTTAGACAAGTTGGGCATG+TGG 0.562750 3_4:+59749500 None:intergenic
ATTAAGATGTGTGGATGGAA+CGG 0.563367 3_4:-59749255 Msa0510640:three_prime_UTR
TCCCAGTATGATGTTAGCAA+TGG 0.563508 3_4:-59751469 None:intergenic
GGTGTGATTGATCATTGAAA+AGG 0.567351 3_4:+59749883 None:intergenic
CTGGTTACTGGAAAGCAACT+GGG 0.568979 3_4:-59750799 Msa0510640:CDS
TGAAGCTACTGCCTACTGCT+AGG 0.573069 3_4:+59749468 None:intergenic
GAAGGTTGGAATGAAGGCAA+TGG 0.573071 3_4:+59749905 None:intergenic
TTATTTGAATGATCTAGTAG+TGG 0.575129 3_4:-59749312 Msa0510640:three_prime_UTR
TGCGCAGAAATGGCAAAGAT+GGG 0.576663 3_4:-59750899 Msa0510640:intron
GAATTAGTTGCAAGTAAAGG+TGG 0.579741 3_4:+59749983 None:intergenic
CAAAGATGGGAGAAAGAGAG+TGG 0.580922 3_4:-59750886 Msa0510640:CDS
GGAGGAGTAGATGGTCCTAT+GGG 0.586562 3_4:-59749536 Msa0510640:CDS
TCCTTCTCATACCACCTGCA+AGG 0.587913 3_4:-59750633 Msa0510640:intron
ATTATTAACAGTAAAGGAGG+AGG 0.590070 3_4:-59749554 Msa0510640:CDS
ACCTTGCAGGTGGTATGAGA+AGG 0.591967 3_4:+59750632 None:intergenic
AAAATACCTGGAAGTTCCCA+TGG 0.594367 3_4:+59751267 None:intergenic
ACAATTATTAACAGTAAAGG+AGG 0.596659 3_4:-59749557 Msa0510640:CDS
TGTGGAGATGGAGATGGAGA+TGG 0.601306 3_4:-59749645 Msa0510640:CDS
CCTCAATAGATGTGAGCCAT+GGG 0.602795 3_4:-59751283 Msa0510640:CDS
ATTCCCTGTGGAGATGGAGA+TGG 0.605578 3_4:-59749651 Msa0510640:CDS
TAGTACGTAGTAGTTACCGC+AGG 0.610339 3_4:+59749412 None:intergenic
TGGCTACAAATTAAGATGTG+TGG 0.610705 3_4:-59749264 Msa0510640:three_prime_UTR
CAAATTCAAGGACATTTAGG+TGG 0.614283 3_4:-59750049 Msa0510640:CDS
TGAAAACTCCTTATTCCCTG+TGG 0.636642 3_4:-59749663 Msa0510640:CDS
AGCTAACTGGACATAGGCAT+AGG 0.637027 3_4:+59749340 None:intergenic
GAAAGCAACTGGGAAGGACA+AGG 0.641859 3_4:-59750789 Msa0510640:CDS
GAGACAGAAAATACCCAACC+GGG 0.645170 3_4:-59750847 Msa0510640:CDS
GTTGGGTGAAACCTGAAACC+AGG 0.645484 3_4:+59751390 None:intergenic
AACGAACAAGGTCTACCACC+TGG 0.649637 3_4:-59751408 Msa0510640:CDS
TACAAATTAAGATGTGTGGA+TGG 0.652047 3_4:-59749260 Msa0510640:three_prime_UTR
GGCCAAGAATCTATTCCCAT+AGG 0.657180 3_4:+59749521 None:intergenic
CAGGATATTTCATAAATCAG+GGG 0.657923 3_4:-59750092 Msa0510640:CDS
CCTTCCTTTGTAGAAAACAA+GGG 0.658759 3_4:+59750721 None:intergenic
TGATTGATCATTGAAAAGGA+AGG 0.667339 3_4:+59749887 None:intergenic
TCTCCATCTCCATCTCCACA+GGG 0.678879 3_4:+59749648 None:intergenic
TTACTGGAAAGCAACTGGGA+AGG 0.681913 3_4:-59750795 Msa0510640:CDS
TGTAGAGTCTACCTTGCAGG+TGG 0.682650 3_4:+59750622 None:intergenic
TACAAAGGAAGGGCCCCTCG+TGG 0.684378 3_4:-59750710 Msa0510640:CDS
GAGATGGAGATGGAGATGGA+TGG 0.687367 3_4:-59749641 Msa0510640:CDS
TACTTCAGTATACTGACCTG+CGG 0.709176 3_4:-59749428 Msa0510640:three_prime_UTR
GATGTGTGGATGGAACGGAT+CGG 0.741357 3_4:-59749250 Msa0510640:three_prime_UTR
GGGTGAAACCTGAAACCAGG+TGG 0.745805 3_4:+59751393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTAATTAAATAGAAAAA+TGG + chr3_4:59750344-59750363 None:intergenic 10.0%
!!! ATTTTATACATGAAATTATA+AGG - chr3_4:59750535-59750554 Msa0510640:intron 10.0%
!!! TAATTTCTAATAACTTTTTA+TGG - chr3_4:59751415-59751434 Msa0510640:CDS 10.0%
!! GTATTAATTAAATAGAAAAA+TGG + chr3_4:59750344-59750363 None:intergenic 10.0%
!!! ATTTTATACATGAAATTATA+AGG - chr3_4:59750535-59750554 Msa0510640:intron 10.0%
!!! TAATTTCTAATAACTTTTTA+TGG - chr3_4:59751415-59751434 Msa0510640:CDS 10.0%
!! ATAACAAAATATTAATACCT+AGG + chr3_4:59749708-59749727 None:intergenic 15.0%
!!! TTCAATTTTTGTCTATTTTT+GGG - chr3_4:59750154-59750173 Msa0510640:intron 15.0%
!! ACAAAGTATATTTATTCATT+GGG + chr3_4:59750491-59750510 None:intergenic 15.0%
!! AACAAAGTATATTTATTCAT+TGG + chr3_4:59750492-59750511 None:intergenic 15.0%
!! AATGAATAAATATACTTTGT+TGG - chr3_4:59750491-59750510 Msa0510640:intron 15.0%
!! TTTAGAAAATTAAATTTGAC+AGG - chr3_4:59750568-59750587 Msa0510640:intron 15.0%
!! ATAACAAAATATTAATACCT+AGG + chr3_4:59749708-59749727 None:intergenic 15.0%
!!! TTCAATTTTTGTCTATTTTT+GGG - chr3_4:59750154-59750173 Msa0510640:intron 15.0%
!! ACAAAGTATATTTATTCATT+GGG + chr3_4:59750491-59750510 None:intergenic 15.0%
!! AACAAAGTATATTTATTCAT+TGG + chr3_4:59750492-59750511 None:intergenic 15.0%
!! AATGAATAAATATACTTTGT+TGG - chr3_4:59750491-59750510 Msa0510640:intron 15.0%
!! TTTAGAAAATTAAATTTGAC+AGG - chr3_4:59750568-59750587 Msa0510640:intron 15.0%
!!! GTTACTAGATTTAAAATGAA+TGG - chr3_4:59749668-59749687 Msa0510640:CDS 20.0%
!! AAAATAGACAAAAATTGAAG+AGG + chr3_4:59750153-59750172 None:intergenic 20.0%
!!! CTTCAATTTTTGTCTATTTT+TGG - chr3_4:59750153-59750172 Msa0510640:intron 20.0%
!! AGTAAAAAAAGAAATGACTT+GGG + chr3_4:59750205-59750224 None:intergenic 20.0%
!! TCATAAATTCATTATCCATT+TGG - chr3_4:59750252-59750271 Msa0510640:intron 20.0%
!! CATAAATTCATTATCCATTT+GGG - chr3_4:59750253-59750272 Msa0510640:intron 20.0%
!!! TATCTTTTAAGTTCTTATCT+TGG - chr3_4:59750439-59750458 Msa0510640:intron 20.0%
!! ATGACAATTATTAACAGTAA+AGG - chr3_4:59751139-59751158 Msa0510640:intron 20.0%
!! TACAAAATTATTTATGCTAC+AGG + chr3_4:59751334-59751353 None:intergenic 20.0%
!!! GTTACTAGATTTAAAATGAA+TGG - chr3_4:59749668-59749687 Msa0510640:CDS 20.0%
!! AAAATAGACAAAAATTGAAG+AGG + chr3_4:59750153-59750172 None:intergenic 20.0%
!!! CTTCAATTTTTGTCTATTTT+TGG - chr3_4:59750153-59750172 Msa0510640:intron 20.0%
!! AGTAAAAAAAGAAATGACTT+GGG + chr3_4:59750205-59750224 None:intergenic 20.0%
!! TCATAAATTCATTATCCATT+TGG - chr3_4:59750252-59750271 Msa0510640:intron 20.0%
!! CATAAATTCATTATCCATTT+GGG - chr3_4:59750253-59750272 Msa0510640:intron 20.0%
!!! TATCTTTTAAGTTCTTATCT+TGG - chr3_4:59750439-59750458 Msa0510640:intron 20.0%
!! ATGACAATTATTAACAGTAA+AGG - chr3_4:59751139-59751158 Msa0510640:intron 20.0%
!! TACAAAATTATTTATGCTAC+AGG + chr3_4:59751334-59751353 None:intergenic 20.0%
!! AGAACTCATTACCTTTTATT+TGG - chr3_4:59749338-59749357 Msa0510640:three_prime_UTR 25.0%
! ATCTAGTAACTAGATATGAT+AGG + chr3_4:59749658-59749677 None:intergenic 25.0%
!! ACTAGATTTAAAATGAATGG+TGG - chr3_4:59749671-59749690 Msa0510640:CDS 25.0%
! ATTTATGCAATAAAGAGAAG+TGG + chr3_4:59749759-59749778 None:intergenic 25.0%
! TAAATGTTGAATTGAACGAA+TGG - chr3_4:59749774-59749793 Msa0510640:CDS 25.0%
! GTAAAAAAAGAAATGACTTG+GGG + chr3_4:59750204-59750223 None:intergenic 25.0%
! GAGTAAAAAAAGAAATGACT+TGG + chr3_4:59750206-59750225 None:intergenic 25.0%
! AATGAATTAGTTGCAAGTAA+AGG + chr3_4:59750722-59750741 None:intergenic 25.0%
!!! ATTATTATTGTTGTTTCTGG+TGG + chr3_4:59750840-59750859 None:intergenic 25.0%
!!! TGGATTATTATTGTTGTTTC+TGG + chr3_4:59750843-59750862 None:intergenic 25.0%
! TATTGTCAATAATCCATCTT+AGG + chr3_4:59750997-59751016 None:intergenic 25.0%
! ACAATTATTAACAGTAAAGG+AGG - chr3_4:59751142-59751161 Msa0510640:intron 25.0%
! TTATTTGAATGATCTAGTAG+TGG - chr3_4:59751387-59751406 Msa0510640:CDS 25.0%
!! AGAACTCATTACCTTTTATT+TGG - chr3_4:59749338-59749357 Msa0510640:three_prime_UTR 25.0%
! ATCTAGTAACTAGATATGAT+AGG + chr3_4:59749658-59749677 None:intergenic 25.0%
!! ACTAGATTTAAAATGAATGG+TGG - chr3_4:59749671-59749690 Msa0510640:CDS 25.0%
! ATTTATGCAATAAAGAGAAG+TGG + chr3_4:59749759-59749778 None:intergenic 25.0%
! TAAATGTTGAATTGAACGAA+TGG - chr3_4:59749774-59749793 Msa0510640:CDS 25.0%
! GTAAAAAAAGAAATGACTTG+GGG + chr3_4:59750204-59750223 None:intergenic 25.0%
! GAGTAAAAAAAGAAATGACT+TGG + chr3_4:59750206-59750225 None:intergenic 25.0%
! AATGAATTAGTTGCAAGTAA+AGG + chr3_4:59750722-59750741 None:intergenic 25.0%
!!! ATTATTATTGTTGTTTCTGG+TGG + chr3_4:59750840-59750859 None:intergenic 25.0%
!!! TGGATTATTATTGTTGTTTC+TGG + chr3_4:59750843-59750862 None:intergenic 25.0%
! TATTGTCAATAATCCATCTT+AGG + chr3_4:59750997-59751016 None:intergenic 25.0%
! ACAATTATTAACAGTAAAGG+AGG - chr3_4:59751142-59751161 Msa0510640:intron 25.0%
! TTATTTGAATGATCTAGTAG+TGG - chr3_4:59751387-59751406 Msa0510640:CDS 25.0%
CATGAAAAGAAAAACGAACA+AGG - chr3_4:59749279-59749298 Msa0510640:three_prime_UTR 30.0%
TAATGAGTTCTTCATCAGTT+GGG + chr3_4:59749329-59749348 None:intergenic 30.0%
!! TACCTTTTATTTGGCTTCTA+AGG - chr3_4:59749347-59749366 Msa0510640:three_prime_UTR 30.0%
AACCTTAGAAGCCAAATAAA+AGG + chr3_4:59749352-59749371 None:intergenic 30.0%
AAATAGTTCAAATTCCTCTC+AGG - chr3_4:59749530-59749549 Msa0510640:CDS 30.0%
!! TGTCTTGTTATTAGGTTCAA+GGG + chr3_4:59749628-59749647 None:intergenic 30.0%
!! ATGTCTTGTTATTAGGTTCA+AGG + chr3_4:59749629-59749648 None:intergenic 30.0%
!! GCACAATATGTCTTGTTATT+AGG + chr3_4:59749636-59749655 None:intergenic 30.0%
TATGTCCACTTATGTTAAGT+AGG - chr3_4:59749725-59749744 Msa0510640:CDS 30.0%
ATGTCCACTTATGTTAAGTA+GGG - chr3_4:59749726-59749745 Msa0510640:CDS 30.0%
! AAAAGTGATGAGAGTGTAAA+CGG + chr3_4:59750045-59750064 None:intergenic 30.0%
ACATCAAAAAACTACCCAAA+TGG + chr3_4:59750270-59750289 None:intergenic 30.0%
ATTAAATTTGACAGGAAGAG+TGG - chr3_4:59750576-59750595 Msa0510640:intron 30.0%
TTAAATTTGACAGGAAGAGT+GGG - chr3_4:59750577-59750596 Msa0510640:intron 30.0%
TGCAGGATATTTCATAAATC+AGG - chr3_4:59750605-59750624 Msa0510640:intron 30.0%
GCAGGATATTTCATAAATCA+GGG - chr3_4:59750606-59750625 Msa0510640:intron 30.0%
CAGGATATTTCATAAATCAG+GGG - chr3_4:59750607-59750626 Msa0510640:intron 30.0%
AATTCACTACTCCAAATTCA+AGG - chr3_4:59750638-59750657 Msa0510640:CDS 30.0%
TATGAGAATGTGAGAGTAAT+TGG + chr3_4:59750766-59750785 None:intergenic 30.0%
TGATTGATCATTGAAAAGGA+AGG + chr3_4:59750815-59750834 None:intergenic 30.0%
! TAGAAAGTAGCTTCTGTTTT+TGG + chr3_4:59750923-59750942 None:intergenic 30.0%
ATTGTGATTGTGATTGTGAT+TGG + chr3_4:59750955-59750974 None:intergenic 30.0%
TGCTACAAATGCTGAATTTA+GGG - chr3_4:59751114-59751133 Msa0510640:intron 30.0%
ATTATTAACAGTAAAGGAGG+AGG - chr3_4:59751145-59751164 Msa0510640:intron 30.0%
GTTTAGACTTTAGACAAGTT+GGG + chr3_4:59751209-59751228 None:intergenic 30.0%
AGTTTAGACTTTAGACAAGT+TGG + chr3_4:59751210-59751229 None:intergenic 30.0%
TCAAATAAAGCTTAGCTAAC+TGG + chr3_4:59751375-59751394 None:intergenic 30.0%
TACAAATTAAGATGTGTGGA+TGG - chr3_4:59751439-59751458 Msa0510640:CDS 30.0%
CATGAAAAGAAAAACGAACA+AGG - chr3_4:59749279-59749298 Msa0510640:three_prime_UTR 30.0%
TAATGAGTTCTTCATCAGTT+GGG + chr3_4:59749329-59749348 None:intergenic 30.0%
!! TACCTTTTATTTGGCTTCTA+AGG - chr3_4:59749347-59749366 Msa0510640:three_prime_UTR 30.0%
AACCTTAGAAGCCAAATAAA+AGG + chr3_4:59749352-59749371 None:intergenic 30.0%
AAATAGTTCAAATTCCTCTC+AGG - chr3_4:59749530-59749549 Msa0510640:CDS 30.0%
!! TGTCTTGTTATTAGGTTCAA+GGG + chr3_4:59749628-59749647 None:intergenic 30.0%
!! ATGTCTTGTTATTAGGTTCA+AGG + chr3_4:59749629-59749648 None:intergenic 30.0%
!! GCACAATATGTCTTGTTATT+AGG + chr3_4:59749636-59749655 None:intergenic 30.0%
TATGTCCACTTATGTTAAGT+AGG - chr3_4:59749725-59749744 Msa0510640:CDS 30.0%
ATGTCCACTTATGTTAAGTA+GGG - chr3_4:59749726-59749745 Msa0510640:CDS 30.0%
! AAAAGTGATGAGAGTGTAAA+CGG + chr3_4:59750045-59750064 None:intergenic 30.0%
ACATCAAAAAACTACCCAAA+TGG + chr3_4:59750270-59750289 None:intergenic 30.0%
ATTAAATTTGACAGGAAGAG+TGG - chr3_4:59750576-59750595 Msa0510640:intron 30.0%
TTAAATTTGACAGGAAGAGT+GGG - chr3_4:59750577-59750596 Msa0510640:intron 30.0%
TGCAGGATATTTCATAAATC+AGG - chr3_4:59750605-59750624 Msa0510640:intron 30.0%
GCAGGATATTTCATAAATCA+GGG - chr3_4:59750606-59750625 Msa0510640:intron 30.0%
CAGGATATTTCATAAATCAG+GGG - chr3_4:59750607-59750626 Msa0510640:intron 30.0%
AATTCACTACTCCAAATTCA+AGG - chr3_4:59750638-59750657 Msa0510640:CDS 30.0%
TATGAGAATGTGAGAGTAAT+TGG + chr3_4:59750766-59750785 None:intergenic 30.0%
TGATTGATCATTGAAAAGGA+AGG + chr3_4:59750815-59750834 None:intergenic 30.0%
! TAGAAAGTAGCTTCTGTTTT+TGG + chr3_4:59750923-59750942 None:intergenic 30.0%
ATTGTGATTGTGATTGTGAT+TGG + chr3_4:59750955-59750974 None:intergenic 30.0%
TGCTACAAATGCTGAATTTA+GGG - chr3_4:59751114-59751133 Msa0510640:intron 30.0%
ATTATTAACAGTAAAGGAGG+AGG - chr3_4:59751145-59751164 Msa0510640:intron 30.0%
GTTTAGACTTTAGACAAGTT+GGG + chr3_4:59751209-59751228 None:intergenic 30.0%
AGTTTAGACTTTAGACAAGT+TGG + chr3_4:59751210-59751229 None:intergenic 30.0%
TCAAATAAAGCTTAGCTAAC+TGG + chr3_4:59751375-59751394 None:intergenic 30.0%
TACAAATTAAGATGTGTGGA+TGG - chr3_4:59751439-59751458 Msa0510640:CDS 30.0%
GTAATGAGTTCTTCATCAGT+TGG + chr3_4:59749330-59749349 None:intergenic 35.0%
TCATGTGAGTAGAAAATACC+TGG + chr3_4:59749447-59749466 None:intergenic 35.0%
CTACAGTATCTTGTTCATGT+TGG + chr3_4:59749470-59749489 None:intergenic 35.0%
TGCATGTCTAGTAAATGTGA+TGG - chr3_4:59749496-59749515 Msa0510640:exon 35.0%
TAGATAGAATTACACCTGAG+AGG + chr3_4:59749547-59749566 None:intergenic 35.0%
TGTCCACTTATGTTAAGTAG+GGG - chr3_4:59749727-59749746 Msa0510640:CDS 35.0%
!!! AAGACCCTTGTTTTCTACAA+AGG - chr3_4:59749974-59749993 Msa0510640:CDS 35.0%
CCTTCCTTTGTAGAAAACAA+GGG + chr3_4:59749981-59750000 None:intergenic 35.0%
!!! CCTTGTTTTCTACAAAGGAA+GGG - chr3_4:59749979-59749998 Msa0510640:CDS 35.0%
CTCCAAATTCAAGGACATTT+AGG - chr3_4:59750647-59750666 Msa0510640:CDS 35.0%
CACCTAAATGTCCTTGAATT+TGG + chr3_4:59750652-59750671 None:intergenic 35.0%
CAAATTCAAGGACATTTAGG+TGG - chr3_4:59750650-59750669 Msa0510640:CDS 35.0%
!!! CTTTTTTGGGGGGTTAAATT+AGG + chr3_4:59750680-59750699 None:intergenic 35.0%
!!! AGGAGGTAAACAGCTTTTTT+GGG + chr3_4:59750693-59750712 None:intergenic 35.0%
!!! TAGGAGGTAAACAGCTTTTT+TGG + chr3_4:59750694-59750713 None:intergenic 35.0%
GAATTAGTTGCAAGTAAAGG+TGG + chr3_4:59750719-59750738 None:intergenic 35.0%
! GTGAGAGTAATTGGTCATTT+TGG + chr3_4:59750757-59750776 None:intergenic 35.0%
TGATCATTGAAAAGGAAGGT+TGG + chr3_4:59750811-59750830 None:intergenic 35.0%
GGTGTGATTGATCATTGAAA+AGG + chr3_4:59750819-59750838 None:intergenic 35.0%
!! TTGAAGAGTAGTTCTGAAGA+TGG + chr3_4:59750863-59750882 None:intergenic 35.0%
!!! AGTAGCTTCTGTTTTTGGAA+TGG + chr3_4:59750918-59750937 None:intergenic 35.0%
ATGATGCTCTTAACCTAAGA+TGG - chr3_4:59750981-59751000 Msa0510640:intron 35.0%
CTGCTACAAATGCTGAATTT+AGG - chr3_4:59751113-59751132 Msa0510640:intron 35.0%
TGGCTACAAATTAAGATGTG+TGG - chr3_4:59751435-59751454 Msa0510640:CDS 35.0%
ATTAAGATGTGTGGATGGAA+CGG - chr3_4:59751444-59751463 Msa0510640:CDS 35.0%
GTAATGAGTTCTTCATCAGT+TGG + chr3_4:59749330-59749349 None:intergenic 35.0%
TCATGTGAGTAGAAAATACC+TGG + chr3_4:59749447-59749466 None:intergenic 35.0%
CTACAGTATCTTGTTCATGT+TGG + chr3_4:59749470-59749489 None:intergenic 35.0%
TGCATGTCTAGTAAATGTGA+TGG - chr3_4:59749496-59749515 Msa0510640:exon 35.0%
TAGATAGAATTACACCTGAG+AGG + chr3_4:59749547-59749566 None:intergenic 35.0%
TGTCCACTTATGTTAAGTAG+GGG - chr3_4:59749727-59749746 Msa0510640:CDS 35.0%
!!! AAGACCCTTGTTTTCTACAA+AGG - chr3_4:59749974-59749993 Msa0510640:CDS 35.0%
CCTTCCTTTGTAGAAAACAA+GGG + chr3_4:59749981-59750000 None:intergenic 35.0%
!!! CCTTGTTTTCTACAAAGGAA+GGG - chr3_4:59749979-59749998 Msa0510640:CDS 35.0%
CTCCAAATTCAAGGACATTT+AGG - chr3_4:59750647-59750666 Msa0510640:CDS 35.0%
CACCTAAATGTCCTTGAATT+TGG + chr3_4:59750652-59750671 None:intergenic 35.0%
CAAATTCAAGGACATTTAGG+TGG - chr3_4:59750650-59750669 Msa0510640:CDS 35.0%
!!! CTTTTTTGGGGGGTTAAATT+AGG + chr3_4:59750680-59750699 None:intergenic 35.0%
!!! AGGAGGTAAACAGCTTTTTT+GGG + chr3_4:59750693-59750712 None:intergenic 35.0%
!!! TAGGAGGTAAACAGCTTTTT+TGG + chr3_4:59750694-59750713 None:intergenic 35.0%
GAATTAGTTGCAAGTAAAGG+TGG + chr3_4:59750719-59750738 None:intergenic 35.0%
! GTGAGAGTAATTGGTCATTT+TGG + chr3_4:59750757-59750776 None:intergenic 35.0%
TGATCATTGAAAAGGAAGGT+TGG + chr3_4:59750811-59750830 None:intergenic 35.0%
GGTGTGATTGATCATTGAAA+AGG + chr3_4:59750819-59750838 None:intergenic 35.0%
!! TTGAAGAGTAGTTCTGAAGA+TGG + chr3_4:59750863-59750882 None:intergenic 35.0%
!!! AGTAGCTTCTGTTTTTGGAA+TGG + chr3_4:59750918-59750937 None:intergenic 35.0%
ATGATGCTCTTAACCTAAGA+TGG - chr3_4:59750981-59751000 Msa0510640:intron 35.0%
CTGCTACAAATGCTGAATTT+AGG - chr3_4:59751113-59751132 Msa0510640:intron 35.0%
TGGCTACAAATTAAGATGTG+TGG - chr3_4:59751435-59751454 Msa0510640:CDS 35.0%
ATTAAGATGTGTGGATGGAA+CGG - chr3_4:59751444-59751463 Msa0510640:CDS 35.0%
AAAATACCTGGAAGTTCCCA+TGG + chr3_4:59749435-59749454 None:intergenic 40.0%
!! CTTGTTATTAGGTTCAAGGG+TGG + chr3_4:59749625-59749644 None:intergenic 40.0%
GTCCACTTATGTTAAGTAGG+GGG - chr3_4:59749728-59749747 Msa0510640:CDS 40.0%
AACCCCCTACTTAACATAAG+TGG + chr3_4:59749733-59749752 None:intergenic 40.0%
AGAGACAGAAAATACCCAAC+CGG - chr3_4:59749851-59749870 Msa0510640:CDS 40.0%
! TGCAGTAGTAGATCCCTTTT+GGG - chr3_4:59749944-59749963 Msa0510640:CDS 40.0%
!!! CCCTTGTTTTCTACAAAGGA+AGG - chr3_4:59749978-59749997 Msa0510640:CDS 40.0%
CCCTTCCTTTGTAGAAAACA+AGG + chr3_4:59749982-59750001 None:intergenic 40.0%
!! ATTTGGTCTTTTCACCACGA+GGG + chr3_4:59750006-59750025 None:intergenic 40.0%
TCGTGGTGAAAAGACCAAAT+GGG - chr3_4:59750006-59750025 Msa0510640:CDS 40.0%
!! GAGAGATAACTTGTTGAGCA+CGG + chr3_4:59750129-59750148 None:intergenic 40.0%
! AATGACTTGGGGTATCTGTA+TGG + chr3_4:59750193-59750212 None:intergenic 40.0%
!!! AGGTAAACAGCTTTTTTGGG+GGG + chr3_4:59750690-59750709 None:intergenic 40.0%
!!! GAGGTAAACAGCTTTTTTGG+GGG + chr3_4:59750691-59750710 None:intergenic 40.0%
!!! GGAGGTAAACAGCTTTTTTG+GGG + chr3_4:59750692-59750711 None:intergenic 40.0%
AAGGTTGGAATGAAGGCAAT+GGG + chr3_4:59750796-59750815 None:intergenic 40.0%
GAAAAGGAAGGTTGGAATGA+AGG + chr3_4:59750803-59750822 None:intergenic 40.0%
TGAAAACTCCTTATTCCCTG+TGG - chr3_4:59751036-59751055 Msa0510640:intron 40.0%
CATGATCTGATTGCATTCTC+AGG - chr3_4:59751088-59751107 Msa0510640:intron 40.0%
GTCCTATGGGAATAGATTCT+TGG - chr3_4:59751176-59751195 Msa0510640:intron 40.0%
AGTCTAAACTACCTAGCAGT+AGG - chr3_4:59751220-59751239 Msa0510640:intron 40.0%
TACTTCAGTATACTGACCTG+CGG - chr3_4:59751271-59751290 Msa0510640:intron 40.0%
AAGCTTAGCTAACTGGACAT+AGG + chr3_4:59751368-59751387 None:intergenic 40.0%
AAAATACCTGGAAGTTCCCA+TGG + chr3_4:59749435-59749454 None:intergenic 40.0%
!! CTTGTTATTAGGTTCAAGGG+TGG + chr3_4:59749625-59749644 None:intergenic 40.0%
GTCCACTTATGTTAAGTAGG+GGG - chr3_4:59749728-59749747 Msa0510640:CDS 40.0%
AACCCCCTACTTAACATAAG+TGG + chr3_4:59749733-59749752 None:intergenic 40.0%
AGAGACAGAAAATACCCAAC+CGG - chr3_4:59749851-59749870 Msa0510640:CDS 40.0%
! TGCAGTAGTAGATCCCTTTT+GGG - chr3_4:59749944-59749963 Msa0510640:CDS 40.0%
!!! CCCTTGTTTTCTACAAAGGA+AGG - chr3_4:59749978-59749997 Msa0510640:CDS 40.0%
CCCTTCCTTTGTAGAAAACA+AGG + chr3_4:59749982-59750001 None:intergenic 40.0%
!! ATTTGGTCTTTTCACCACGA+GGG + chr3_4:59750006-59750025 None:intergenic 40.0%
TCGTGGTGAAAAGACCAAAT+GGG - chr3_4:59750006-59750025 Msa0510640:CDS 40.0%
!! GAGAGATAACTTGTTGAGCA+CGG + chr3_4:59750129-59750148 None:intergenic 40.0%
! AATGACTTGGGGTATCTGTA+TGG + chr3_4:59750193-59750212 None:intergenic 40.0%
!!! AGGTAAACAGCTTTTTTGGG+GGG + chr3_4:59750690-59750709 None:intergenic 40.0%
!!! GAGGTAAACAGCTTTTTTGG+GGG + chr3_4:59750691-59750710 None:intergenic 40.0%
!!! GGAGGTAAACAGCTTTTTTG+GGG + chr3_4:59750692-59750711 None:intergenic 40.0%
AAGGTTGGAATGAAGGCAAT+GGG + chr3_4:59750796-59750815 None:intergenic 40.0%
GAAAAGGAAGGTTGGAATGA+AGG + chr3_4:59750803-59750822 None:intergenic 40.0%
TGAAAACTCCTTATTCCCTG+TGG - chr3_4:59751036-59751055 Msa0510640:intron 40.0%
CATGATCTGATTGCATTCTC+AGG - chr3_4:59751088-59751107 Msa0510640:intron 40.0%
GTCCTATGGGAATAGATTCT+TGG - chr3_4:59751176-59751195 Msa0510640:intron 40.0%
AGTCTAAACTACCTAGCAGT+AGG - chr3_4:59751220-59751239 Msa0510640:intron 40.0%
TACTTCAGTATACTGACCTG+CGG - chr3_4:59751271-59751290 Msa0510640:intron 40.0%
AAGCTTAGCTAACTGGACAT+AGG + chr3_4:59751368-59751387 None:intergenic 40.0%
ACCTCAATAGATGTGAGCCA+TGG - chr3_4:59749415-59749434 Msa0510640:three_prime_UTR 45.0%
CCTCAATAGATGTGAGCCAT+GGG - chr3_4:59749416-59749435 Msa0510640:three_prime_UTR 45.0%
TATTAGGTTCAAGGGTGGAG+AGG + chr3_4:59749620-59749639 None:intergenic 45.0%
TGCGCAGAAATGGCAAAGAT+GGG - chr3_4:59749800-59749819 Msa0510640:CDS 45.0%
CAAAGATGGGAGAAAGAGAG+TGG - chr3_4:59749813-59749832 Msa0510640:CDS 45.0%
GAGACAGAAAATACCCAACC+GGG - chr3_4:59749852-59749871 Msa0510640:CDS 45.0%
! TGTTTGTTCTAAGCCCGGTT+GGG + chr3_4:59749868-59749887 None:intergenic 45.0%
! TGCTCTGTTTGTTCTAAGCC+CGG + chr3_4:59749873-59749892 None:intergenic 45.0%
ACAAACAGAGCAACAAGTGC+TGG - chr3_4:59749881-59749900 Msa0510640:CDS 45.0%
CTGGTTACTGGAAAGCAACT+GGG - chr3_4:59749900-59749919 Msa0510640:CDS 45.0%
TTACTGGAAAGCAACTGGGA+AGG - chr3_4:59749904-59749923 Msa0510640:CDS 45.0%
! CTGCAGTAGTAGATCCCTTT+TGG - chr3_4:59749943-59749962 Msa0510640:CDS 45.0%
! GCAGTAGTAGATCCCTTTTG+GGG - chr3_4:59749945-59749964 Msa0510640:CDS 45.0%
GGTCTTCTTCATCCCCAAAA+GGG + chr3_4:59749960-59749979 None:intergenic 45.0%
!! TTTGGTCTTTTCACCACGAG+GGG + chr3_4:59750005-59750024 None:intergenic 45.0%
!! CATTTGGTCTTTTCACCACG+AGG + chr3_4:59750007-59750026 None:intergenic 45.0%
CTCGTGGTGAAAAGACCAAA+TGG - chr3_4:59750005-59750024 Msa0510640:CDS 45.0%
GTACTCATGCATGACCCATT+TGG + chr3_4:59750023-59750042 None:intergenic 45.0%
!! GTTCTTATCTTGGTGCTGCT+AGG - chr3_4:59750449-59750468 Msa0510640:intron 45.0%
GTTGCAAGTAAAGGTGGTGT+AGG + chr3_4:59750713-59750732 None:intergenic 45.0%
GAAGGTTGGAATGAAGGCAA+TGG + chr3_4:59750797-59750816 None:intergenic 45.0%
AGTAAAGGAGGAGGAGTAGA+TGG - chr3_4:59751154-59751173 Msa0510640:intron 45.0%
GGCCAAGAATCTATTCCCAT+AGG + chr3_4:59751181-59751200 None:intergenic 45.0%
! CTTTAGACAAGTTGGGCATG+TGG + chr3_4:59751202-59751221 None:intergenic 45.0%
TAGTACGTAGTAGTTACCGC+AGG + chr3_4:59751290-59751309 None:intergenic 45.0%
AGCTAACTGGACATAGGCAT+AGG + chr3_4:59751362-59751381 None:intergenic 45.0%
ACCTCAATAGATGTGAGCCA+TGG - chr3_4:59749415-59749434 Msa0510640:three_prime_UTR 45.0%
CCTCAATAGATGTGAGCCAT+GGG - chr3_4:59749416-59749435 Msa0510640:three_prime_UTR 45.0%
TATTAGGTTCAAGGGTGGAG+AGG + chr3_4:59749620-59749639 None:intergenic 45.0%
TGCGCAGAAATGGCAAAGAT+GGG - chr3_4:59749800-59749819 Msa0510640:CDS 45.0%
CAAAGATGGGAGAAAGAGAG+TGG - chr3_4:59749813-59749832 Msa0510640:CDS 45.0%
GAGACAGAAAATACCCAACC+GGG - chr3_4:59749852-59749871 Msa0510640:CDS 45.0%
! TGTTTGTTCTAAGCCCGGTT+GGG + chr3_4:59749868-59749887 None:intergenic 45.0%
! TGCTCTGTTTGTTCTAAGCC+CGG + chr3_4:59749873-59749892 None:intergenic 45.0%
ACAAACAGAGCAACAAGTGC+TGG - chr3_4:59749881-59749900 Msa0510640:CDS 45.0%
CTGGTTACTGGAAAGCAACT+GGG - chr3_4:59749900-59749919 Msa0510640:CDS 45.0%
TTACTGGAAAGCAACTGGGA+AGG - chr3_4:59749904-59749923 Msa0510640:CDS 45.0%
! CTGCAGTAGTAGATCCCTTT+TGG - chr3_4:59749943-59749962 Msa0510640:CDS 45.0%
! GCAGTAGTAGATCCCTTTTG+GGG - chr3_4:59749945-59749964 Msa0510640:CDS 45.0%
GGTCTTCTTCATCCCCAAAA+GGG + chr3_4:59749960-59749979 None:intergenic 45.0%
!! TTTGGTCTTTTCACCACGAG+GGG + chr3_4:59750005-59750024 None:intergenic 45.0%
!! CATTTGGTCTTTTCACCACG+AGG + chr3_4:59750007-59750026 None:intergenic 45.0%
CTCGTGGTGAAAAGACCAAA+TGG - chr3_4:59750005-59750024 Msa0510640:CDS 45.0%
GTACTCATGCATGACCCATT+TGG + chr3_4:59750023-59750042 None:intergenic 45.0%
!! GTTCTTATCTTGGTGCTGCT+AGG - chr3_4:59750449-59750468 Msa0510640:intron 45.0%
GTTGCAAGTAAAGGTGGTGT+AGG + chr3_4:59750713-59750732 None:intergenic 45.0%
GAAGGTTGGAATGAAGGCAA+TGG + chr3_4:59750797-59750816 None:intergenic 45.0%
AGTAAAGGAGGAGGAGTAGA+TGG - chr3_4:59751154-59751173 Msa0510640:intron 45.0%
GGCCAAGAATCTATTCCCAT+AGG + chr3_4:59751181-59751200 None:intergenic 45.0%
! CTTTAGACAAGTTGGGCATG+TGG + chr3_4:59751202-59751221 None:intergenic 45.0%
TAGTACGTAGTAGTTACCGC+AGG + chr3_4:59751290-59751309 None:intergenic 45.0%
AGCTAACTGGACATAGGCAT+AGG + chr3_4:59751362-59751381 None:intergenic 45.0%
AACGAACAAGGTCTACCACC+TGG - chr3_4:59749291-59749310 Msa0510640:three_prime_UTR 50.0%
AAGGTCTACCACCTGGTTTC+AGG - chr3_4:59749298-59749317 Msa0510640:three_prime_UTR 50.0%
GTTGGGTGAAACCTGAAACC+AGG + chr3_4:59749312-59749331 None:intergenic 50.0%
CCCATGGCTCACATCTATTG+AGG + chr3_4:59749419-59749438 None:intergenic 50.0%
CGAATGGTTGTGCGCAGAAA+TGG - chr3_4:59749790-59749809 Msa0510640:CDS 50.0%
GTGCGCAGAAATGGCAAAGA+TGG - chr3_4:59749799-59749818 Msa0510640:CDS 50.0%
! CTGTTTGTTCTAAGCCCGGT+TGG + chr3_4:59749869-59749888 None:intergenic 50.0%
!! GAGCAACAAGTGCTGGTTAC+TGG - chr3_4:59749888-59749907 Msa0510640:CDS 50.0%
GCTGGTTACTGGAAAGCAAC+TGG - chr3_4:59749899-59749918 Msa0510640:CDS 50.0%
GAAAGCAACTGGGAAGGACA+AGG - chr3_4:59749910-59749929 Msa0510640:CDS 50.0%
GGGTCTTCTTCATCCCCAAA+AGG + chr3_4:59749961-59749980 None:intergenic 50.0%
TCCTTCTCATACCACCTGCA+AGG - chr3_4:59750066-59750085 Msa0510640:CDS 50.0%
ACCTTGCAGGTGGTATGAGA+AGG + chr3_4:59750070-59750089 None:intergenic 50.0%
TGTAGAGTCTACCTTGCAGG+TGG + chr3_4:59750080-59750099 None:intergenic 50.0%
GAGTGTAGAGTCTACCTTGC+AGG + chr3_4:59750083-59750102 None:intergenic 50.0%
AGGAAGAGTGGGTGATATGC+AGG - chr3_4:59750588-59750607 Msa0510640:intron 50.0%
GCAAGTAAAGGTGGTGTAGG+AGG + chr3_4:59750710-59750729 None:intergenic 50.0%
! TGGAATGGTCTGCTGCTTCA+TGG + chr3_4:59750903-59750922 None:intergenic 50.0%
CTCCTTATTCCCTGTGGAGA+TGG - chr3_4:59751042-59751061 Msa0510640:intron 50.0%
CTCCATCTCCACAGGGAATA+AGG + chr3_4:59751047-59751066 None:intergenic 50.0%
ATTCCCTGTGGAGATGGAGA+TGG - chr3_4:59751048-59751067 Msa0510640:intron 50.0%
TCTCCATCTCCATCTCCACA+GGG + chr3_4:59751054-59751073 None:intergenic 50.0%
ATCTCCATCTCCATCTCCAC+AGG + chr3_4:59751055-59751074 None:intergenic 50.0%
TGTGGAGATGGAGATGGAGA+TGG - chr3_4:59751054-59751073 Msa0510640:intron 50.0%
GAGATGGAGATGGAGATGGA+TGG - chr3_4:59751058-59751077 Msa0510640:intron 50.0%
AGGAGGAGTAGATGGTCCTA+TGG - chr3_4:59751162-59751181 Msa0510640:intron 50.0%
GGAGGAGTAGATGGTCCTAT+GGG - chr3_4:59751163-59751182 Msa0510640:intron 50.0%
TGAAGCTACTGCCTACTGCT+AGG + chr3_4:59751234-59751253 None:intergenic 50.0%
GATGTGTGGATGGAACGGAT+CGG - chr3_4:59751449-59751468 Msa0510640:CDS 50.0%
AACGAACAAGGTCTACCACC+TGG - chr3_4:59749291-59749310 Msa0510640:three_prime_UTR 50.0%
AAGGTCTACCACCTGGTTTC+AGG - chr3_4:59749298-59749317 Msa0510640:three_prime_UTR 50.0%
GTTGGGTGAAACCTGAAACC+AGG + chr3_4:59749312-59749331 None:intergenic 50.0%
CCCATGGCTCACATCTATTG+AGG + chr3_4:59749419-59749438 None:intergenic 50.0%
CGAATGGTTGTGCGCAGAAA+TGG - chr3_4:59749790-59749809 Msa0510640:CDS 50.0%
GTGCGCAGAAATGGCAAAGA+TGG - chr3_4:59749799-59749818 Msa0510640:CDS 50.0%
! CTGTTTGTTCTAAGCCCGGT+TGG + chr3_4:59749869-59749888 None:intergenic 50.0%
!! GAGCAACAAGTGCTGGTTAC+TGG - chr3_4:59749888-59749907 Msa0510640:CDS 50.0%
GCTGGTTACTGGAAAGCAAC+TGG - chr3_4:59749899-59749918 Msa0510640:CDS 50.0%
GAAAGCAACTGGGAAGGACA+AGG - chr3_4:59749910-59749929 Msa0510640:CDS 50.0%
GGGTCTTCTTCATCCCCAAA+AGG + chr3_4:59749961-59749980 None:intergenic 50.0%
TCCTTCTCATACCACCTGCA+AGG - chr3_4:59750066-59750085 Msa0510640:CDS 50.0%
ACCTTGCAGGTGGTATGAGA+AGG + chr3_4:59750070-59750089 None:intergenic 50.0%
TGTAGAGTCTACCTTGCAGG+TGG + chr3_4:59750080-59750099 None:intergenic 50.0%
GAGTGTAGAGTCTACCTTGC+AGG + chr3_4:59750083-59750102 None:intergenic 50.0%
AGGAAGAGTGGGTGATATGC+AGG - chr3_4:59750588-59750607 Msa0510640:intron 50.0%
GCAAGTAAAGGTGGTGTAGG+AGG + chr3_4:59750710-59750729 None:intergenic 50.0%
! TGGAATGGTCTGCTGCTTCA+TGG + chr3_4:59750903-59750922 None:intergenic 50.0%
CTCCTTATTCCCTGTGGAGA+TGG - chr3_4:59751042-59751061 Msa0510640:intron 50.0%
CTCCATCTCCACAGGGAATA+AGG + chr3_4:59751047-59751066 None:intergenic 50.0%
ATTCCCTGTGGAGATGGAGA+TGG - chr3_4:59751048-59751067 Msa0510640:intron 50.0%
TCTCCATCTCCATCTCCACA+GGG + chr3_4:59751054-59751073 None:intergenic 50.0%
ATCTCCATCTCCATCTCCAC+AGG + chr3_4:59751055-59751074 None:intergenic 50.0%
TGTGGAGATGGAGATGGAGA+TGG - chr3_4:59751054-59751073 Msa0510640:intron 50.0%
GAGATGGAGATGGAGATGGA+TGG - chr3_4:59751058-59751077 Msa0510640:intron 50.0%
AGGAGGAGTAGATGGTCCTA+TGG - chr3_4:59751162-59751181 Msa0510640:intron 50.0%
GGAGGAGTAGATGGTCCTAT+GGG - chr3_4:59751163-59751182 Msa0510640:intron 50.0%
TGAAGCTACTGCCTACTGCT+AGG + chr3_4:59751234-59751253 None:intergenic 50.0%
GATGTGTGGATGGAACGGAT+CGG - chr3_4:59751449-59751468 Msa0510640:CDS 50.0%
GGGTGAAACCTGAAACCAGG+TGG + chr3_4:59749309-59749328 None:intergenic 55.0%
TGTGAGCCATGGGAACTTCC+AGG - chr3_4:59749426-59749445 Msa0510640:three_prime_UTR 55.0%
TGGTGGCAGTTACACGTCCT+AGG - chr3_4:59749688-59749707 Msa0510640:CDS 55.0%
GGGTGAAACCTGAAACCAGG+TGG + chr3_4:59749309-59749328 None:intergenic 55.0%
TGTGAGCCATGGGAACTTCC+AGG - chr3_4:59749426-59749445 Msa0510640:three_prime_UTR 55.0%
TGGTGGCAGTTACACGTCCT+AGG - chr3_4:59749688-59749707 Msa0510640:CDS 55.0%
TACAAAGGAAGGGCCCCTCG+TGG - chr3_4:59749989-59750008 Msa0510640:CDS 60.0%
TACAAAGGAAGGGCCCCTCG+TGG - chr3_4:59749989-59750008 Msa0510640:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 59749237 59751484 59749237 ID=Msa0510640;Name=Msa0510640
chr3_4 mRNA 59749237 59751484 59749237 ID=Msa0510640-mRNA-1;Parent=Msa0510640;Name=Msa0510640-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.33|1|1|1|3|265|373
chr3_4 exon 59749237 59750131 59749237 ID=Msa0510640-mRNA-1:exon:14166;Parent=Msa0510640-mRNA-1
chr3_4 exon 59750634 59750914 59750634 ID=Msa0510640-mRNA-1:exon:14165;Parent=Msa0510640-mRNA-1
chr3_4 exon 59751274 59751484 59751274 ID=Msa0510640-mRNA-1:exon:14164;Parent=Msa0510640-mRNA-1
chr3_4 CDS 59751274 59751484 59751274 ID=Msa0510640-mRNA-1:cds;Parent=Msa0510640-mRNA-1
chr3_4 CDS 59750634 59750914 59750634 ID=Msa0510640-mRNA-1:cds;Parent=Msa0510640-mRNA-1
chr3_4 CDS 59749502 59750131 59749502 ID=Msa0510640-mRNA-1:cds;Parent=Msa0510640-mRNA-1
chr3_4 three_prime_UTR 59749237 59749501 59749237 ID=Msa0510640-mRNA-1:three_prime_utr;Parent=Msa0510640-mRNA-1
Gene Sequence

>Msa0510640

ATGATGTTAGCAATGGAAGAAGTACTATGTGAACTTAGTGATCATGAAAAGAAAAACGAACAAGGTCTACCACCTGGTTTCAGGTTTCACCCAACTGATGAAGAACTCATTACCTTTTATTTGGCTTCTAAGGTTTTCAAAAATACTTATTTCAATAATGTCAAGTTTGCTGAAGTTGACCTCAATAGATGTGAGCCATGGGAACTTCCAGAAATGGCAAAGATGGGAGAAAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAATACCCAACCGGGCTTAGAACAAACAGAGCAACAAGTGCTGGTTACTGGAAAGCAACTGGGAAGGACAAGGAAGTTTACAGCTGCAGTAGTAGATCCCTTTTGGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTACACTCTCATCACTTTTCTCCTTCTCATACCACCTGCAAGGAAGAGTGGGTGATATGCAGGATATTTCATAAATCAGGGGAAAAGAGAAATTCACTACTCCAAATTCAAGGACATTTAGGTGGTAATCCTAATTTAACCCCCCAAAAAAGCTGTTTACCTCCTACACCACCTTTACTTGCAACTAATTCATTTACACAACTAGACCAAAATGACCAATTACTCTCACATTCTCATAATATTTTCCCATTGCCTTCATTCCAACCTTCCTTTTCAATGATCAATCACACCACCAGAAACAACAATAATAATCCATCTTCAGAACTACTCTTCAAGTCACAACAATATTACACCATGAAGCAGCAGACCATTCCAAAAACAGAAGCTACTTTCTATGATCAGCACCAATCACAATCACAATCACAATCAATAGATGATGCTCTTAACCTAAGATGGATTATTGACAATAATAATAATACTAATAATTATGAAAACTCCTTATTCCCTGTGGAGATGGAGATGGAGATGGATGGTGCTGCTCATGATCTGATTGCATTCTCAGGAGCTGCTACAAATGCTGAATTTAGGGACATGACAATTATTAACAGTAAAGGAGGAGGAGTAGATGGTCCTATGGGAATAGATTCTTGGCCACATGCCCAACTTGTCTAA
Protein sequence

>Msa0510640

MMLAMEEVLCELSDHEKKNEQGLPPGFRFHPTDEELITFYLASKVFKNTYFNNVKFAEVDLNRCEPWELPEMAKMGEREWYLFSLRDRKYPTGLRTNRATSAGYWKATGKDKEVYSCSSRSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLHSHHFSPSHTTCKEEWVICRIFHKSGEKRNSLLQIQGHLGGNPNLTPQKSCLPPTPPLLATNSFTQLDQNDQLLSHSHNIFPLPSFQPSFSMINHTTRNNNNNPSSELLFKSQQYYTMKQQTIPKTEATFYDQHQSQSQSQSIDDALNLRWIIDNNNNTNNYENSLFPVEMEMEMDGAAHDLIAFSGAATNAEFRDMTIINSKGGGVDGPMGIDSWPHAQLV*