Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0451400 | RHN66888.1 | 94.245 | 278 | 9 | 3 | 1 | 277 | 59 | 330 | 9.72e-177 | 500 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0451400 | sp|Q9S728|PDF1_ARATH | 57.627 | 177 | 52 | 5 | 118 | 276 | 134 | 305 | 1.99e-56 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0451400 | A0A396IQA7 | 94.245 | 278 | 9 | 3 | 1 | 277 | 59 | 330 | 4.64e-177 | 500 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0451400 | 0.801900 | 7.238436e-49 | -8.615850e-47 |
| Msa0002930 | Msa0451400 | 0.816904 | 4.348226e-52 | -8.615850e-47 |
| Msa0004390 | Msa0451400 | 0.825539 | 4.436292e-54 | -8.615850e-47 |
| Msa0006980 | Msa0451400 | 0.870685 | 1.210696e-66 | -8.615850e-47 |
| Msa0015710 | Msa0451400 | 0.863580 | 2.248827e-64 | -8.615850e-47 |
| Msa0016120 | Msa0451400 | 0.850880 | 1.275749e-60 | -8.615850e-47 |
| Msa0019600 | Msa0451400 | 0.927486 | 1.099078e-91 | -8.615850e-47 |
| Msa0024550 | Msa0451400 | 0.804086 | 2.557635e-49 | -8.615850e-47 |
| Msa0029910 | Msa0451400 | 0.800131 | 1.664056e-48 | -8.615850e-47 |
| Msa0050040 | Msa0451400 | 0.853644 | 2.085091e-61 | -8.615850e-47 |
| Msa0055450 | Msa0451400 | 0.847174 | 1.366721e-59 | -8.615850e-47 |
| Msa0066320 | Msa0451400 | 0.866897 | 2.037908e-65 | -8.615850e-47 |
| Msa0074650 | Msa0451400 | 0.806453 | 8.164820e-50 | -8.615850e-47 |
| Msa0074800 | Msa0451400 | 0.818384 | 2.015666e-52 | -8.615850e-47 |
| Msa0080990 | Msa0451400 | 0.837725 | 4.386495e-57 | -8.615850e-47 |
| Msa0084000 | Msa0451400 | 0.815405 | 9.401138e-52 | -8.615850e-47 |
| Msa0098440 | Msa0451400 | 0.814396 | 1.573608e-51 | -8.615850e-47 |
| Msa0102990 | Msa0451400 | 0.853185 | 2.823255e-61 | -8.615850e-47 |
| Msa0104500 | Msa0451400 | 0.820512 | 6.596176e-53 | -8.615850e-47 |
| Msa0109880 | Msa0451400 | 0.872230 | 3.730384e-67 | -8.615850e-47 |
| Msa0111750 | Msa0451400 | 0.889259 | 2.842203e-73 | -8.615850e-47 |
| Msa0124130 | Msa0451400 | 0.891296 | 4.520187e-74 | -8.615850e-47 |
| Msa0141120 | Msa0451400 | 0.873129 | 1.867552e-67 | -8.615850e-47 |
| Msa0141600 | Msa0451400 | 0.813321 | 2.715716e-51 | -8.615850e-47 |
| Msa0147600 | Msa0451400 | 0.843077 | 1.749419e-58 | -8.615850e-47 |
| Msa0149140 | Msa0451400 | 0.900435 | 7.349921e-78 | -8.615850e-47 |
| Msa0152480 | Msa0451400 | 0.828729 | 7.644569e-55 | -8.615850e-47 |
| Msa0152500 | Msa0451400 | 0.850966 | 1.206320e-60 | -8.615850e-47 |
| Msa0156250 | Msa0451400 | 0.901390 | 2.812638e-78 | -8.615850e-47 |
| Msa0176470 | Msa0451400 | 0.800432 | 1.445014e-48 | -8.615850e-47 |
| Msa0185490 | Msa0451400 | 0.877832 | 4.579719e-69 | -8.615850e-47 |
| Msa0194380 | Msa0451400 | 0.830532 | 2.785874e-55 | -8.615850e-47 |
| Msa0197100 | Msa0451400 | 0.864489 | 1.171795e-64 | -8.615850e-47 |
| Msa0203030 | Msa0451400 | 0.852750 | 3.761386e-61 | -8.615850e-47 |
| Msa0212080 | Msa0451400 | 0.874207 | 8.088407e-68 | -8.615850e-47 |
| Msa0212150 | Msa0451400 | 0.894129 | 3.295317e-75 | -8.615850e-47 |
| Msa0215640 | Msa0451400 | 0.856618 | 2.848263e-62 | -8.615850e-47 |
| Msa0217230 | Msa0451400 | 0.849232 | 3.689866e-60 | -8.615850e-47 |
| Msa0219190 | Msa0451400 | 0.865247 | 6.781242e-65 | -8.615850e-47 |
| Msa0221290 | Msa0451400 | 0.851836 | 6.848121e-61 | -8.615850e-47 |
| Msa0232920 | Msa0451400 | 0.806088 | 9.750009e-50 | -8.615850e-47 |
| Msa0373960 | Msa0451400 | 0.850210 | 1.967069e-60 | -8.615850e-47 |
| Msa0375680 | Msa0451400 | 0.865714 | 4.831261e-65 | -8.615850e-47 |
| Msa0375700 | Msa0451400 | 0.846228 | 2.477863e-59 | -8.615850e-47 |
| Msa0375890 | Msa0451400 | 0.832161 | 1.106894e-55 | -8.615850e-47 |
| Msa0375910 | Msa0451400 | 0.825856 | 3.730164e-54 | -8.615850e-47 |
| Msa0378500 | Msa0451400 | 0.800650 | 1.304959e-48 | -8.615850e-47 |
| Msa0382010 | Msa0451400 | 0.805155 | 1.530196e-49 | -8.615850e-47 |
| Msa0384910 | Msa0451400 | 0.817262 | 3.612092e-52 | -8.615850e-47 |
| Msa0385390 | Msa0451400 | 0.840868 | 6.708813e-58 | -8.615850e-47 |
| Msa0392420 | Msa0451400 | 0.887449 | 1.412981e-72 | -8.615850e-47 |
| Msa0392460 | Msa0451400 | 0.885302 | 9.143877e-72 | -8.615850e-47 |
| Msa0392490 | Msa0451400 | 0.878165 | 3.501185e-69 | -8.615850e-47 |
| Msa0406000 | Msa0451400 | 0.968772 | 3.723366e-129 | -8.615850e-47 |
| Msa0415320 | Msa0451400 | 0.853898 | 1.761985e-61 | -8.615850e-47 |
| Msa0417440 | Msa0451400 | 0.818412 | 1.986514e-52 | -8.615850e-47 |
| Msa0418200 | Msa0451400 | 0.809058 | 2.282797e-50 | -8.615850e-47 |
| Msa0423100 | Msa0451400 | 0.846827 | 1.700818e-59 | -8.615850e-47 |
| Msa0424330 | Msa0451400 | 0.898880 | 3.437176e-77 | -8.615850e-47 |
| Msa0424340 | Msa0451400 | 0.912907 | 1.136896e-83 | -8.615850e-47 |
| Msa0424350 | Msa0451400 | 0.907238 | 6.290427e-81 | -8.615850e-47 |
| Msa0436500 | Msa0451400 | 0.825689 | 4.087988e-54 | -8.615850e-47 |
| Msa0441590 | Msa0451400 | 0.847877 | 8.758908e-60 | -8.615850e-47 |
| Msa0451400 | Msa0464540 | 0.821879 | 3.193279e-53 | -8.615850e-47 |
| Msa0451400 | Msa0469260 | 0.854135 | 1.505589e-61 | -8.615850e-47 |
| Msa0451400 | Msa0471240 | 0.839290 | 1.730772e-57 | -8.615850e-47 |
| Msa0451400 | Msa0477460 | 0.842348 | 2.731942e-58 | -8.615850e-47 |
| Msa0451400 | Msa0478260 | 0.830322 | 3.135202e-55 | -8.615850e-47 |
| Msa0451400 | Msa0479540 | 0.830083 | 3.585178e-55 | -8.615850e-47 |
| Msa0451400 | Msa0480970 | 0.806506 | 7.958963e-50 | -8.615850e-47 |
| Msa0451400 | Msa0487570 | 0.891396 | 4.128969e-74 | -8.615850e-47 |
| Msa0451400 | Msa0487630 | 0.882090 | 1.394475e-70 | -8.615850e-47 |
| Msa0451400 | Msa0492190 | 0.951500 | 1.791708e-109 | -8.615850e-47 |
| Msa0451400 | Msa0510640 | 0.803774 | 2.968471e-49 | -8.615850e-47 |
| Msa0451400 | Msa0515950 | 0.901909 | 1.661878e-78 | -8.615850e-47 |
| Msa0451400 | Msa0523000 | 0.825985 | 3.477147e-54 | -8.615850e-47 |
| Msa0451400 | Msa0533080 | 0.808101 | 3.654921e-50 | -8.615850e-47 |
| Msa0451400 | Msa0534930 | 0.921670 | 2.655465e-88 | -8.615850e-47 |
| Msa0451400 | Msa0535040 | 0.898843 | 3.565625e-77 | -8.615850e-47 |
| Msa0451400 | Msa0537920 | 0.872854 | 2.308749e-67 | -8.615850e-47 |
| Msa0451400 | Msa0538220 | 0.852036 | 6.006524e-61 | -8.615850e-47 |
| Msa0451400 | Msa0575740 | 0.880350 | 5.903681e-70 | -8.615850e-47 |
| Msa0451400 | Msa0581750 | 0.807819 | 4.195687e-50 | -8.615850e-47 |
| Msa0451400 | Msa0591790 | 0.927721 | 7.918959e-92 | -8.615850e-47 |
| Msa0451400 | Msa0591800 | 0.831816 | 1.346768e-55 | -8.615850e-47 |
| Msa0451400 | Msa0594090 | 0.933530 | 1.631722e-95 | -8.615850e-47 |
| Msa0451400 | Msa0625890 | 0.808683 | 2.746151e-50 | -8.615850e-47 |
| Msa0451400 | Msa0641250 | 0.888579 | 5.207677e-73 | -8.615850e-47 |
| Msa0451400 | Msa0641360 | 0.827342 | 1.649449e-54 | -8.615850e-47 |
| Msa0451400 | Msa0663680 | 0.805101 | 1.570640e-49 | -8.615850e-47 |
| Msa0451400 | Msa0669840 | 0.957431 | 2.759860e-115 | -8.615850e-47 |
| Msa0451400 | Msa0680150 | 0.843442 | 1.397590e-58 | -8.615850e-47 |
| Msa0451400 | Msa0685330 | 0.826984 | 2.009680e-54 | -8.615850e-47 |
| Msa0451400 | Msa0688500 | 0.842267 | 2.869536e-58 | -8.615850e-47 |
| Msa0451400 | Msa0707220 | 0.843181 | 1.640627e-58 | -8.615850e-47 |
| Msa0451400 | Msa0709450 | 0.841741 | 3.952561e-58 | -8.615850e-47 |
| Msa0451400 | Msa0711320 | 0.840015 | 1.121519e-57 | -8.615850e-47 |
| Msa0451400 | Msa0720040 | 0.816931 | 4.286768e-52 | -8.615850e-47 |
| Msa0451400 | Msa0725860 | 0.850547 | 1.582551e-60 | -8.615850e-47 |
| Msa0451400 | Msa0727930 | 0.812113 | 4.990818e-51 | -8.615850e-47 |
| Msa0451400 | Msa0737190 | 0.830930 | 2.224997e-55 | -8.615850e-47 |
| Msa0451400 | Msa0739470 | 0.807385 | 5.188143e-50 | -8.615850e-47 |
| Msa0451400 | Msa0739580 | 0.929458 | 6.752194e-93 | -8.615850e-47 |
| Msa0451400 | Msa0742180 | 0.814718 | 1.335998e-51 | -8.615850e-47 |
| Msa0451400 | Msa0747780 | 0.806563 | 7.741592e-50 | -8.615850e-47 |
| Msa0451400 | Msa0748000 | 0.836549 | 8.768733e-57 | -8.615850e-47 |
| Msa0451400 | Msa0748400 | 0.842046 | 3.283350e-58 | -8.615850e-47 |
| Msa0451400 | Msa0751890 | 0.841345 | 5.026102e-58 | -8.615850e-47 |
| Msa0451400 | Msa0752840 | 0.862418 | 5.138327e-64 | -8.615850e-47 |
| Msa0451400 | Msa0764820 | 0.867340 | 1.471200e-65 | -8.615850e-47 |
| Msa0451400 | Msa0770290 | 0.873097 | 1.913750e-67 | -8.615850e-47 |
| Msa0451400 | Msa0778930 | 0.833708 | 4.566480e-56 | -8.615850e-47 |
| Msa0451400 | Msa0782230 | 0.809901 | 1.504642e-50 | -8.615850e-47 |
| Msa0451400 | Msa0782360 | 0.919743 | 3.072995e-87 | -8.615850e-47 |
| Msa0451400 | Msa0786040 | 0.827704 | 1.350452e-54 | -8.615850e-47 |
| Msa0451400 | Msa0807110 | 0.804880 | 1.746572e-49 | -8.615850e-47 |
| Msa0451400 | Msa0816450 | 0.810127 | 1.345420e-50 | -8.615850e-47 |
| Msa0451400 | Msa0819890 | 0.876230 | 1.647636e-68 | -8.615850e-47 |
| Msa0451400 | Msa0819900 | 0.821911 | 3.138591e-53 | -8.615850e-47 |
| Msa0451400 | Msa0823400 | 0.857654 | 1.408615e-62 | -8.615850e-47 |
| Msa0451400 | Msa0828830 | 0.883844 | 3.179372e-71 | -8.615850e-47 |
| Msa0451400 | Msa0831940 | 0.874292 | 7.568885e-68 | -8.615850e-47 |
| Msa0451400 | Msa0838400 | 0.806328 | 8.677736e-50 | -8.615850e-47 |
| Msa0451400 | Msa0840500 | 0.846146 | 2.608789e-59 | -8.615850e-47 |
| Msa0451400 | Msa0844560 | 0.859129 | 5.122075e-63 | -8.615850e-47 |
| Msa0451400 | Msa0845940 | 0.803055 | 4.184383e-49 | -8.615850e-47 |
| Msa0451400 | Msa0849280 | 0.876049 | 1.901098e-68 | -8.615850e-47 |
| Msa0451400 | Msa0851020 | 0.880234 | 6.494393e-70 | -8.615850e-47 |
| Msa0451400 | Msa0856520 | 0.821398 | 4.125365e-53 | -8.615850e-47 |
| Msa0451400 | Msa0860160 | 0.846912 | 1.612070e-59 | -8.615850e-47 |
| Msa0451400 | Msa0860170 | 0.815212 | 1.037756e-51 | -8.615850e-47 |
| Msa0451400 | Msa0860280 | 0.927997 | 5.376302e-92 | -8.615850e-47 |
| Msa0451400 | Msa0867350 | 0.919694 | 3.265557e-87 | -8.615850e-47 |
| Msa0451400 | Msa0873190 | 0.806937 | 6.452711e-50 | -8.615850e-47 |
| Msa0451400 | Msa0876690 | 0.802482 | 5.493234e-49 | -8.615850e-47 |
| Msa0451400 | Msa0885060 | 0.814589 | 1.426644e-51 | -8.615850e-47 |
| Msa0451400 | Msa0896350 | 0.847868 | 8.804701e-60 | -8.615850e-47 |
| Msa0451400 | Msa0896970 | 0.818776 | 1.642842e-52 | -8.615850e-47 |
| Msa0451400 | Msa0898730 | 0.926058 | 7.886947e-91 | -8.615850e-47 |
| Msa0451400 | Msa0899950 | 0.830742 | 2.474362e-55 | -8.615850e-47 |
| Msa0451400 | Msa0905970 | 0.808415 | 3.132787e-50 | -8.615850e-47 |
| Msa0451400 | Msa0911540 | 0.817505 | 3.184419e-52 | -8.615850e-47 |
| Msa0451400 | Msa0916640 | 0.853376 | 2.489247e-61 | -8.615850e-47 |
| Msa0451400 | Msa0922750 | 0.864057 | 1.598814e-64 | -8.615850e-47 |
| Msa0451400 | Msa0927120 | 0.831115 | 2.003859e-55 | -8.615850e-47 |
| Msa0451400 | Msa0929870 | 0.908218 | 2.172365e-81 | -8.615850e-47 |
| Msa0451400 | Msa0936410 | 0.834265 | 3.313084e-56 | -8.615850e-47 |
| Msa0451400 | Msa0941820 | 0.836027 | 1.190072e-56 | -8.615850e-47 |
| Msa0451400 | Msa0941960 | 0.812568 | 3.971915e-51 | -8.615850e-47 |
| Msa0451400 | Msa0944760 | 0.877894 | 4.356285e-69 | -8.615850e-47 |
| Msa0451400 | Msa0944880 | 0.850594 | 1.535541e-60 | -8.615850e-47 |
| Msa0451400 | Msa0946210 | 0.818024 | 2.432278e-52 | -8.615850e-47 |
| Msa0451400 | Msa0953540 | 0.859501 | 3.960945e-63 | -8.615850e-47 |
| Msa0451400 | Msa0961560 | 0.873315 | 1.617255e-67 | -8.615850e-47 |
| Msa0451400 | Msa0961690 | 0.803483 | 3.412485e-49 | -8.615850e-47 |
| Msa0451400 | Msa0964840 | 0.830348 | 3.088840e-55 | -8.615850e-47 |
| Msa0451400 | Msa0965310 | 0.844918 | 5.613376e-59 | -8.615850e-47 |
| Msa0451400 | Msa0973250 | 0.832305 | 1.019853e-55 | -8.615850e-47 |
| Msa0451400 | Msa0979030 | 0.804689 | 1.914723e-49 | -8.615850e-47 |
| Msa0451400 | Msa0979510 | 0.853668 | 2.052324e-61 | -8.615850e-47 |
| Msa0451400 | Msa0996270 | 0.871232 | 7.996132e-67 | -8.615850e-47 |
| Msa0451400 | Msa0999300 | 0.912902 | 1.142441e-83 | -8.615850e-47 |
| Msa0451400 | Msa0999320 | 0.841485 | 4.618880e-58 | -8.615850e-47 |
| Msa0451400 | Msa0999340 | 0.820491 | 6.671319e-53 | -8.615850e-47 |
| Msa0451400 | Msa0999350 | 0.841706 | 4.037379e-58 | -8.615850e-47 |
| Msa0451400 | Msa0999360 | 0.858006 | 1.107354e-62 | -8.615850e-47 |
| Msa0451400 | Msa0999380 | 0.801973 | 6.993465e-49 | -8.615850e-47 |
| Msa0451400 | Msa0999390 | 0.814746 | 1.316988e-51 | -8.615850e-47 |
| Msa0451400 | Msa0999400 | 0.831926 | 1.265378e-55 | -8.615850e-47 |
| Msa0451400 | Msa0999410 | 0.860956 | 1.438816e-63 | -8.615850e-47 |
| Msa0451400 | Msa0999700 | 0.829094 | 6.236812e-55 | -8.615850e-47 |
| Msa0451400 | Msa1001870 | 0.842709 | 2.191769e-58 | -8.615850e-47 |
| Msa0451400 | Msa1001890 | 0.873459 | 1.446116e-67 | -8.615850e-47 |
| Msa0451400 | Msa1005360 | 0.832493 | 9.160546e-56 | -8.615850e-47 |
| Msa0451400 | Msa1016600 | 0.818742 | 1.672132e-52 | -8.615850e-47 |
| Msa0451400 | Msa1032450 | 0.810879 | 9.252578e-51 | -8.615850e-47 |
| Msa0451400 | Msa1033570 | 0.800165 | 1.638142e-48 | -8.615850e-47 |
| Msa0451400 | Msa1034680 | 0.805386 | 1.368603e-49 | -8.615850e-47 |
| Msa0451400 | Msa1037770 | 0.861734 | 8.330881e-64 | -8.615850e-47 |
| Msa0451400 | Msa1037890 | 0.901933 | 1.622029e-78 | -8.615850e-47 |
| Msa0451400 | Msa1037900 | 0.906245 | 1.822711e-80 | -8.615850e-47 |
| Msa0451400 | Msa1037910 | 0.888173 | 7.462333e-73 | -8.615850e-47 |
| Msa0451400 | Msa1041530 | 0.848979 | 4.339605e-60 | -8.615850e-47 |
| Msa0451400 | Msa1042670 | 0.825393 | 4.804431e-54 | -8.615850e-47 |
| Msa0451400 | Msa1045780 | 0.809436 | 1.893998e-50 | -8.615850e-47 |
| Msa0451400 | Msa1047990 | 0.833859 | 4.185520e-56 | -8.615850e-47 |
| Msa0451400 | Msa1052360 | 0.808912 | 2.453457e-50 | -8.615850e-47 |
| Msa0451400 | Msa1060580 | 0.807289 | 5.435365e-50 | -8.615850e-47 |
| Msa0451400 | Msa1073340 | 0.803622 | 3.192727e-49 | -8.615850e-47 |
| Msa0451400 | Msa1077180 | 0.811260 | 7.654047e-51 | -8.615850e-47 |
| Msa0451400 | Msa1081570 | 0.867134 | 1.712209e-65 | -8.615850e-47 |
| Msa0451400 | Msa1084520 | 0.874398 | 6.966415e-68 | -8.615850e-47 |
| Msa0451400 | Msa1092020 | 0.851469 | 8.699309e-61 | -8.615850e-47 |
| Msa0451400 | Msa1096210 | 0.832828 | 7.563158e-56 | -8.615850e-47 |
| Msa0451400 | Msa1123880 | 0.846357 | 2.285564e-59 | -8.615850e-47 |
| Msa0451400 | Msa1125810 | 0.852785 | 3.676563e-61 | -8.615850e-47 |
| Msa0451400 | Msa1127140 | 0.865876 | 4.297128e-65 | -8.615850e-47 |
| Msa0451400 | Msa1129950 | 0.876180 | 1.714380e-68 | -8.615850e-47 |
| Msa0451400 | Msa1129960 | 0.891152 | 5.152977e-74 | -8.615850e-47 |
| Msa0451400 | Msa1129970 | 0.880242 | 6.447173e-70 | -8.615850e-47 |
| Msa0451400 | Msa1130010 | 0.926354 | 5.264873e-91 | -8.615850e-47 |
| Msa0451400 | Msa1134660 | 0.836090 | 1.147199e-56 | -8.615850e-47 |
| Msa0451400 | Msa1135380 | 0.850407 | 1.731927e-60 | -8.615850e-47 |
| Msa0451400 | Msa1145020 | 0.884817 | 1.385992e-71 | -8.615850e-47 |
| Msa0451400 | Msa1145410 | 0.818503 | 1.894441e-52 | -8.615850e-47 |
| Msa0451400 | Msa1166400 | 0.856555 | 2.973166e-62 | -8.615850e-47 |
| Msa0451400 | Msa1169710 | 0.837557 | 4.844249e-57 | -8.615850e-47 |
| Msa0451400 | Msa1169990 | 0.834890 | 2.307551e-56 | -8.615850e-47 |
| Msa0451400 | Msa1171310 | 0.858529 | 7.738325e-63 | -8.615850e-47 |
| Msa0451400 | Msa1173310 | 0.804781 | 1.831859e-49 | -8.615850e-47 |
| Msa0451400 | Msa1176160 | 0.847739 | 9.555831e-60 | -8.615850e-47 |
| Msa0451400 | Msa1176580 | 0.829032 | 6.458474e-55 | -8.615850e-47 |
| Msa0451400 | Msa1179280 | 0.828038 | 1.122594e-54 | -8.615850e-47 |
| Msa0451400 | Msa1200440 | 0.817717 | 2.853342e-52 | -8.615850e-47 |
| Msa0451400 | Msa1201110 | 0.892494 | 1.506820e-74 | -8.615850e-47 |
| Msa0451400 | Msa1201160 | 0.926007 | 8.463926e-91 | -8.615850e-47 |
| Msa0451400 | Msa1217610 | 0.806798 | 6.903937e-50 | -8.615850e-47 |
| Msa0451400 | Msa1222960 | 0.800441 | 1.438935e-48 | -8.615850e-47 |
| Msa0451400 | Msa1228190 | 0.916000 | 3.013118e-85 | -8.615850e-47 |
| Msa0451400 | Msa1228610 | 0.818874 | 1.560947e-52 | -8.615850e-47 |
| Msa0451400 | Msa1232730 | 0.818216 | 2.200159e-52 | -8.615850e-47 |
| Msa0451400 | Msa1233560 | 0.856655 | 2.777177e-62 | -8.615850e-47 |
| Msa0451400 | Msa1260610 | 0.807308 | 5.386207e-50 | -8.615850e-47 |
| Msa0451400 | Msa1264030 | 0.805608 | 1.229762e-49 | -8.615850e-47 |
| Msa0451400 | Msa1271260 | 0.884480 | 1.850694e-71 | -8.615850e-47 |
| Msa0451400 | Msa1277400 | 0.832852 | 7.459775e-56 | -8.615850e-47 |
| Msa0451400 | Msa1285900 | 0.832509 | 9.078585e-56 | -8.615850e-47 |
| Msa0451400 | Msa1294290 | 0.911961 | 3.358922e-83 | -8.615850e-47 |
| Msa0451400 | Msa1305310 | 0.826709 | 2.337356e-54 | -8.615850e-47 |
| Msa0451400 | Msa1305510 | 0.930108 | 2.645061e-93 | -8.615850e-47 |
| Msa0451400 | Msa1307150 | 0.827772 | 1.300915e-54 | -8.615850e-47 |
| Msa0451400 | Msa1307190 | 0.841835 | 3.734506e-58 | -8.615850e-47 |
| Msa0451400 | Msa1313970 | 0.826792 | 2.233702e-54 | -8.615850e-47 |
| Msa0451400 | Msa1316540 | 0.847926 | 8.490631e-60 | -8.615850e-47 |
| Msa0451400 | Msa1326630 | 0.840732 | 7.285006e-58 | -8.615850e-47 |
| Msa0451400 | Msa1326890 | 0.804745 | 1.864161e-49 | -8.615850e-47 |
| Msa0451400 | Msa1336620 | 0.833410 | 5.420012e-56 | -8.615850e-47 |
| Msa0451400 | Msa1336780 | 0.855955 | 4.455372e-62 | -8.615850e-47 |
| Msa0451400 | Msa1339580 | 0.808375 | 3.194851e-50 | -8.615850e-47 |
| Msa0451400 | Msa1345420 | 0.819515 | 1.115275e-52 | -8.615850e-47 |
| Msa0451400 | Msa1355400 | 0.804598 | 2.000686e-49 | -8.615850e-47 |
| Msa0451400 | Msa1356740 | 0.827547 | 1.472830e-54 | -8.615850e-47 |
| Msa0451400 | Msa1356990 | 0.822302 | 2.547035e-53 | -8.615850e-47 |
| Msa0451400 | Msa1367070 | 0.805831 | 1.103932e-49 | -8.615850e-47 |
| Msa0451400 | Msa1374550 | 0.846709 | 1.832225e-59 | -8.615850e-47 |
| Msa0451400 | Msa1378770 | 0.806887 | 6.611908e-50 | -8.615850e-47 |
| Msa0451400 | Msa1378870 | 0.854518 | 1.166918e-61 | -8.615850e-47 |
| Msa0451400 | Msa1379970 | 0.895174 | 1.231525e-75 | -8.615850e-47 |
| Msa0451400 | Msa1388770 | 0.827049 | 1.938689e-54 | -8.615850e-47 |
| Msa0451400 | Msa1389050 | 0.841885 | 3.621082e-58 | -8.615850e-47 |
| Msa0451400 | Msa1394890 | 0.884769 | 1.444960e-71 | -8.615850e-47 |
| Msa0451400 | Msa1406780 | 0.929646 | 5.152599e-93 | -8.615850e-47 |
| Msa0451400 | Msa1408870 | 0.804531 | 2.065666e-49 | -8.615850e-47 |
| Msa0451400 | Msa1414930 | 0.840293 | 9.490504e-58 | -8.615850e-47 |
| Msa0451400 | Msa1419490 | 0.806509 | 7.945907e-50 | -8.615850e-47 |
| Msa0451400 | Msa1420060 | 0.878156 | 3.527647e-69 | -8.615850e-47 |
| Msa0451400 | Msa1421550 | 0.925298 | 2.217305e-90 | -8.615850e-47 |
| Msa0451400 | Msa1423460 | 0.880321 | 6.045403e-70 | -8.615850e-47 |
| Msa0451400 | Msa1431850 | 0.933714 | 1.231651e-95 | -8.615850e-47 |
| Msa0451400 | Msa1435480 | 0.871228 | 8.018337e-67 | -8.615850e-47 |
| Msa0451400 | Msa1437700 | 0.807719 | 4.404988e-50 | -8.615850e-47 |
| Msa0451400 | Msa1437710 | 0.842652 | 2.269482e-58 | -8.615850e-47 |
| Msa0451400 | Msa1442630 | 0.804101 | 2.539021e-49 | -8.615850e-47 |
| Msa0451400 | Msa1449940 | 0.865648 | 5.070675e-65 | -8.615850e-47 |
| Msa0451400 | Msa1455320 | 0.882902 | 7.050951e-71 | -8.615850e-47 |
| Msa0451400 | Msa1458300 | 0.814420 | 1.554519e-51 | -8.615850e-47 |
| Msa0451400 | Msa1458910 | 0.835776 | 1.378211e-56 | -8.615850e-47 |
| Msa0451400 | Msa1459530 | 0.874166 | 8.353642e-68 | -8.615850e-47 |
| Msa0451400 | Msa1461060 | 0.892976 | 9.655119e-75 | -8.615850e-47 |
| Msa0451400 | Msa1462530 | 0.837730 | 4.373613e-57 | -8.615850e-47 |
| Msa0239030 | Msa0451400 | 0.873080 | 1.938953e-67 | -8.615850e-47 |
| Msa0252630 | Msa0451400 | 0.886906 | 2.274640e-72 | -8.615850e-47 |
| Msa0252770 | Msa0451400 | 0.898490 | 5.043481e-77 | -8.615850e-47 |
| Msa0265420 | Msa0451400 | 0.809941 | 1.475007e-50 | -8.615850e-47 |
| Msa0266930 | Msa0451400 | 0.813149 | 2.961674e-51 | -8.615850e-47 |
| Msa0276740 | Msa0451400 | 0.867473 | 1.334057e-65 | -8.615850e-47 |
| Msa0280750 | Msa0451400 | 0.810644 | 1.040518e-50 | -8.615850e-47 |
| Msa0289920 | Msa0451400 | 0.886596 | 2.980528e-72 | -8.615850e-47 |
| Msa0291330 | Msa0451400 | 0.865542 | 5.477875e-65 | -8.615850e-47 |
| Msa0298240 | Msa0451400 | 0.863971 | 1.699904e-64 | -8.615850e-47 |
| Msa0301580 | Msa0451400 | 0.809257 | 2.069199e-50 | -8.615850e-47 |
| Msa0306120 | Msa0451400 | 0.922951 | 5.038043e-89 | -8.615850e-47 |
| Msa0314630 | Msa0451400 | 0.815422 | 9.322299e-52 | -8.615850e-47 |
| Msa0316680 | Msa0451400 | 0.866912 | 2.015604e-65 | -8.615850e-47 |
| Msa0322830 | Msa0451400 | 0.819241 | 1.287846e-52 | -8.615850e-47 |
| Msa0322840 | Msa0451400 | 0.850700 | 1.432883e-60 | -8.615850e-47 |
| Msa0322860 | Msa0451400 | 0.850026 | 2.215727e-60 | -8.615850e-47 |
| Msa0329460 | Msa0451400 | 0.806179 | 9.326283e-50 | -8.615850e-47 |
| Msa0329620 | Msa0451400 | 0.911908 | 3.566799e-83 | -8.615850e-47 |
| Msa0333450 | Msa0451400 | 0.841669 | 4.129262e-58 | -8.615850e-47 |
| Msa0333700 | Msa0451400 | 0.856174 | 3.843824e-62 | -8.615850e-47 |
| Msa0334700 | Msa0451400 | 0.832726 | 8.018852e-56 | -8.615850e-47 |
| Msa0340480 | Msa0451400 | 0.834673 | 2.615501e-56 | -8.615850e-47 |
| Msa0343660 | Msa0451400 | 0.877539 | 5.797211e-69 | -8.615850e-47 |
| Msa0344570 | Msa0451400 | 0.868012 | 8.957773e-66 | -8.615850e-47 |
| Msa0351770 | Msa0451400 | 0.889141 | 3.158696e-73 | -8.615850e-47 |
| Msa0359250 | Msa0451400 | 0.969157 | 1.032988e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0451400 | MtrunA17_Chr3g0096661 | 94.245 | 278 | 9 | 3 | 1 | 277 | 59 | 330 | 0.0 | 500 |
| Msa0451400 | MtrunA17_Chr5g0443411 | 60.246 | 244 | 76 | 5 | 51 | 276 | 344 | 584 | 1.75e-69 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0451400 | AT2G42840.1 | 57.627 | 177 | 52 | 5 | 118 | 276 | 134 | 305 | 2.02e-57 | 186 |
Find 122 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAATTAATGAAAGCTTTA+TGG | 0.095824 | 3_3:+39269382 | Msa0451400:three_prime_UTR |
| TCTAGGTTGGTGGGGAAATA+TGG | 0.109920 | 3_3:+39268925 | Msa0451400:CDS |
| CTTACACAACTGACCAAGTT+AGG | 0.249344 | 3_3:+39269098 | Msa0451400:CDS |
| ATTAATTAGTTTGTTTGATT+TGG | 0.258808 | 3_3:+39269247 | Msa0451400:three_prime_UTR |
| ATCAAACAAACTAATTAATT+AGG | 0.310726 | 3_3:-39269243 | None:intergenic |
| ACTATGATCAATTAATTTCA+TGG | 0.311503 | 3_3:-39269214 | None:intergenic |
| GGACTCATCCAGGAATAATA+TGG | 0.312895 | 3_3:+39268897 | Msa0451400:CDS |
| GCAACTTACTTGCAAGTTCC+AGG | 0.317360 | 3_3:-39268131 | None:intergenic |
| TTATTAAGAACATTATATTA+AGG | 0.317983 | 3_3:+39269279 | Msa0451400:three_prime_UTR |
| GAAATATGGGAAATGCCTTT+GGG | 0.350660 | 3_3:+39268939 | Msa0451400:CDS |
| GGAAATATGGGAAATGCCTT+TGG | 0.350960 | 3_3:+39268938 | Msa0451400:CDS |
| AGAATTCCCCATATTATTCC+TGG | 0.352015 | 3_3:-39268905 | None:intergenic |
| TTTGGGGTGACTAATATTCC+AGG | 0.367636 | 3_3:+39268956 | Msa0451400:CDS |
| TGCTTCATTCCTTAACTCCT+TGG | 0.367728 | 3_3:+39269060 | Msa0451400:CDS |
| CCACTTGATGGAGGGTTTGA+TGG | 0.369108 | 3_3:-39267972 | None:intergenic |
| TCTTCCCCATGATTTCTTGA+TGG | 0.371230 | 3_3:-39267480 | None:intergenic |
| GGAATAATATGGGGAATTCT+AGG | 0.377925 | 3_3:+39268908 | Msa0451400:CDS |
| GGATTATGTGATGGTGTTGA+TGG | 0.382706 | 3_3:-39267936 | None:intergenic |
| CCTTCCCCATCTCCCTTCCC+TGG | 0.386576 | 3_3:+39268113 | Msa0451400:CDS |
| ACTGTTGAAGTTCCACATTC+AGG | 0.402073 | 3_3:+39267586 | Msa0451400:CDS |
| TGTGGTTCACCAAGGAGTTA+AGG | 0.411983 | 3_3:-39269069 | None:intergenic |
| TTGTGTTGCAGCAGCCTTGT+TGG | 0.413820 | 3_3:-39269146 | None:intergenic |
| CTAGGTTGGTGGGGAAATAT+GGG | 0.416346 | 3_3:+39268926 | Msa0451400:CDS |
| GGTGGATCAGTTGGAGTTGA+TGG | 0.420624 | 3_3:-39268014 | None:intergenic |
| TTCCTACCATCAAGAAATCA+TGG | 0.423013 | 3_3:+39267474 | Msa0451400:exon |
| ATCAATTAATTTCATGGTCT+AGG | 0.428985 | 3_3:-39269208 | None:intergenic |
| CTTCATTTGCCATCTTGAAA+AGG | 0.430225 | 3_3:-39269174 | None:intergenic |
| CTAACTTGGTCAGTTGTGTA+AGG | 0.430724 | 3_3:-39269097 | None:intergenic |
| GATGGGGAAGGAAGGAAAGG+TGG | 0.432710 | 3_3:-39268101 | None:intergenic |
| ACTCCAACACCACCTTCAAC+TGG | 0.433721 | 3_3:+39267879 | Msa0451400:CDS |
| GGTGTGGAGTGAGGTGTTAG+TGG | 0.437639 | 3_3:-39267406 | None:intergenic |
| AAAGGTGGTGTAGGAACAGT+AGG | 0.438620 | 3_3:-39268086 | None:intergenic |
| CAAGTTCCAGGGAAGGGAGA+TGG | 0.440600 | 3_3:-39268119 | None:intergenic |
| GGAGGGTTTGATGGTGTTGA+AGG | 0.443891 | 3_3:-39267963 | None:intergenic |
| GTAGGAGTGCCAGGATCTAT+TGG | 0.447810 | 3_3:-39268068 | None:intergenic |
| GATGGTGTTGATGGTGTAGA+AGG | 0.455226 | 3_3:-39267927 | None:intergenic |
| GACTCATCCAGGAATAATAT+GGG | 0.459996 | 3_3:+39268898 | Msa0451400:CDS |
| TTTGATGGTGTTGAAGGTGT+TGG | 0.464631 | 3_3:-39267957 | None:intergenic |
| TGGAATAAGAGAAGTGAGTG+AGG | 0.468886 | 3_3:-39267441 | None:intergenic |
| ATGCAAACCTGTCCCTAACT+TGG | 0.469578 | 3_3:-39269111 | None:intergenic |
| AACACAAGAACTGATGGTTT+AGG | 0.469650 | 3_3:+39269016 | Msa0451400:CDS |
| TTATAGTATCCACCACTTGA+TGG | 0.470071 | 3_3:-39267984 | None:intergenic |
| AAGTTCCAGGGAAGGGAGAT+GGG | 0.476491 | 3_3:-39268118 | None:intergenic |
| CATCCAGTTGAAGGTGGTGT+TGG | 0.495066 | 3_3:-39267882 | None:intergenic |
| GGAAGGGAGATGGGGAAGGA+AGG | 0.502197 | 3_3:-39268109 | None:intergenic |
| GTAGGAACAGTAGGAGTGCC+AGG | 0.503622 | 3_3:-39268077 | None:intergenic |
| CTTTCCAACACAAGAACTGA+TGG | 0.504329 | 3_3:+39269010 | Msa0451400:CDS |
| GGAGATGGGGAAGGAAGGAA+AGG | 0.504748 | 3_3:-39268104 | None:intergenic |
| AAGCACTGTGAACATTGAAA+AGG | 0.512709 | 3_3:-39267518 | None:intergenic |
| TAATATGGGGAATTCTAGGT+TGG | 0.520470 | 3_3:+39268912 | Msa0451400:CDS |
| AATATTCCAGGGTTTACTCC+TGG | 0.524426 | 3_3:+39268968 | Msa0451400:CDS |
| TAAACCATCAGTTCTTGTGT+TGG | 0.525884 | 3_3:-39269014 | None:intergenic |
| TTACACAACTGACCAAGTTA+GGG | 0.525939 | 3_3:+39269099 | Msa0451400:CDS |
| AGCTACTGGAGGACTCATCC+AGG | 0.526289 | 3_3:+39268887 | Msa0451400:intron |
| GAAGGAAGGAAAGGTGGTGT+AGG | 0.527882 | 3_3:-39268095 | None:intergenic |
| GAATCAGAGAAAACTGATGA+AGG | 0.528354 | 3_3:-39267613 | None:intergenic |
| TATGGGGAATTCTAGGTTGG+TGG | 0.528656 | 3_3:+39268915 | Msa0451400:CDS |
| TCCTACCATCAAGAAATCAT+GGG | 0.537538 | 3_3:+39267475 | Msa0451400:exon |
| CCAGGGAAGGGAGATGGGGA+AGG | 0.539492 | 3_3:-39268113 | None:intergenic |
| CCAGGATCTATTGGTGTCGA+TGG | 0.540136 | 3_3:-39268059 | None:intergenic |
| GAATATCCACATCCAGTTGA+AGG | 0.540702 | 3_3:-39267891 | None:intergenic |
| CAACTGACCAAGTTAGGGAC+AGG | 0.541089 | 3_3:+39269104 | Msa0451400:CDS |
| ACACCACCTTCAACTGGATG+TGG | 0.541466 | 3_3:+39267885 | Msa0451400:CDS |
| GAACATTGAAAAGGAAACAT+AGG | 0.542372 | 3_3:-39267509 | None:intergenic |
| TACTTGCAAGTTCCAGGGAA+GGG | 0.548718 | 3_3:-39268125 | None:intergenic |
| CCATCGACACCAATAGATCC+TGG | 0.553988 | 3_3:+39268059 | Msa0451400:CDS |
| GTTGGAAAGTGCTTGTGGTA+AGG | 0.554876 | 3_3:-39268996 | None:intergenic |
| AGGAGTACTTCTCCATCTCA+TGG | 0.562266 | 3_3:+39267798 | Msa0451400:CDS |
| ATGGTAGGAAGAAAGTGAGA+TGG | 0.564634 | 3_3:-39267461 | None:intergenic |
| AAAGTGACTGGTGGATCAGT+TGG | 0.565302 | 3_3:-39268023 | None:intergenic |
| CAACTTACTTGCAAGTTCCA+GGG | 0.565925 | 3_3:-39268130 | None:intergenic |
| GGTGGTGAGCTTCCATGAGA+TGG | 0.567793 | 3_3:-39267810 | None:intergenic |
| TTGGGGTGACTAATATTCCA+GGG | 0.568346 | 3_3:+39268957 | Msa0451400:CDS |
| GGATCAGTTGGAGTTGATGG+TGG | 0.570978 | 3_3:-39268011 | None:intergenic |
| AATAAGAGAAGTGAGTGAGG+AGG | 0.578944 | 3_3:-39267438 | None:intergenic |
| AACATAATGCAGGCCCACAC+AGG | 0.580543 | 3_3:+39267778 | Msa0451400:intron |
| CCCCATGATTTCTTGATGGT+AGG | 0.583936 | 3_3:-39267476 | None:intergenic |
| GATGGTGGTGTCAAAGTGAC+TGG | 0.584003 | 3_3:-39268035 | None:intergenic |
| GAAGGTGTTGGATTATGTGA+TGG | 0.585952 | 3_3:-39267945 | None:intergenic |
| GGTGATGAGCTTCCATGTGA+AGG | 0.591177 | 3_3:-39267831 | None:intergenic |
| ATGGGGAATTCTAGGTTGGT+GGG | 0.591873 | 3_3:+39268916 | Msa0451400:CDS |
| CAGTTGTGTAAGGGAACTTG+TGG | 0.593107 | 3_3:-39269087 | None:intergenic |
| AGTATCCACCACTTGATGGA+GGG | 0.594468 | 3_3:-39267980 | None:intergenic |
| GCTTGTGGTAAGGTTAGACC+AGG | 0.598119 | 3_3:-39268986 | None:intergenic |
| TTACTTGCAAGTTCCAGGGA+AGG | 0.600468 | 3_3:-39268126 | None:intergenic |
| AAATATGGGAAATGCCTTTG+GGG | 0.602185 | 3_3:+39268940 | Msa0451400:CDS |
| AGTTCCAGGGAAGGGAGATG+GGG | 0.604246 | 3_3:-39268117 | None:intergenic |
| TCACCACCATCACATGGTGG+AGG | 0.604865 | 3_3:+39267849 | Msa0451400:CDS |
| GGAAGCTCACCACCTTCACA+TGG | 0.609355 | 3_3:+39267819 | Msa0451400:CDS |
| CACCACCATCACATGGTGGA+GGG | 0.611558 | 3_3:+39267850 | Msa0451400:CDS |
| ATGGAGAAGTACTCCTGTGT+GGG | 0.620575 | 3_3:-39267791 | None:intergenic |
| TAACTTGGTCAGTTGTGTAA+GGG | 0.620778 | 3_3:-39269096 | None:intergenic |
| TAGTATCCACCACTTGATGG+AGG | 0.621034 | 3_3:-39267981 | None:intergenic |
| AGCTCATCACCACCATCACA+TGG | 0.624071 | 3_3:+39267843 | Msa0451400:CDS |
| TCTATTGGTGTCGATGGAGA+TGG | 0.626145 | 3_3:-39268053 | None:intergenic |
| TAAGACCCTCCACCATGTGA+TGG | 0.626381 | 3_3:-39267855 | None:intergenic |
| GTTAGACCAGGAGTAAACCC+TGG | 0.627036 | 3_3:-39268974 | None:intergenic |
| TTAGGAGCACTCTACAGAGA+AGG | 0.629627 | 3_3:+39269034 | Msa0451400:CDS |
| CCATCAAACCCTCCATCAAG+TGG | 0.632528 | 3_3:+39267972 | Msa0451400:CDS |
| TGGGGAATTCTAGGTTGGTG+GGG | 0.637604 | 3_3:+39268917 | Msa0451400:CDS |
| ATCATCACTTCACTCCAACA+AGG | 0.638513 | 3_3:+39269132 | Msa0451400:CDS |
| TGGAGATTGCAAGAATCACA+AGG | 0.639496 | 3_3:-39267561 | None:intergenic |
| GATGAGCTTCCATGTGAAGG+TGG | 0.651216 | 3_3:-39267828 | None:intergenic |
| TATCCACATCCAGTTGAAGG+TGG | 0.658842 | 3_3:-39267888 | None:intergenic |
| TCAAACCCTCCATCAAGTGG+TGG | 0.659955 | 3_3:+39267975 | Msa0451400:CDS |
| CTTGTGTTGGAAAGTGCTTG+TGG | 0.664673 | 3_3:-39269001 | None:intergenic |
| GATGAAGGAGTTCCTGAATG+TGG | 0.665673 | 3_3:-39267598 | None:intergenic |
| ATGTGGAACTTCAACAGTGG+TGG | 0.667826 | 3_3:-39267581 | None:intergenic |
| GGTGGTGTCAAAGTGACTGG+TGG | 0.668630 | 3_3:-39268032 | None:intergenic |
| ATTGGTGTCGATGGAGATGG+TGG | 0.669929 | 3_3:-39268050 | None:intergenic |
| GACCCTCCACCATGTGATGG+TGG | 0.670898 | 3_3:-39267852 | None:intergenic |
| AGGGAACTTGTGGTTCACCA+AGG | 0.670949 | 3_3:-39269077 | None:intergenic |
| CCTACCATCAAGAAATCATG+GGG | 0.672591 | 3_3:+39267476 | Msa0451400:exon |
| ACTCATCCAGGAATAATATG+GGG | 0.672725 | 3_3:+39268899 | Msa0451400:CDS |
| TGGAATATTAGTCACCCCAA+AGG | 0.674127 | 3_3:-39268954 | None:intergenic |
| GGAGATTGCAAGAATCACAA+GGG | 0.687379 | 3_3:-39267560 | None:intergenic |
| GGTGTAGAAGGATCATGTGG+TGG | 0.703395 | 3_3:-39267915 | None:intergenic |
| GAGATTGCAAGAATCACAAG+GGG | 0.706994 | 3_3:-39267559 | None:intergenic |
| GATGGTGTAGAAGGATCATG+TGG | 0.712840 | 3_3:-39267918 | None:intergenic |
| TGAATGTGGAACTTCAACAG+TGG | 0.722345 | 3_3:-39267584 | None:intergenic |
| GATGGAGAAGTACTCCTGTG+TGG | 0.742969 | 3_3:-39267792 | None:intergenic |
| TCATCACCACCATCACATGG+TGG | 0.774824 | 3_3:+39267846 | Msa0451400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATTAAACAATGTTA+GGG | - | chr3_3:39267716-39267735 | None:intergenic | 10.0% |
| !! | AATAAAAAATATTAACAATG+TGG | - | chr3_3:39268169-39268188 | None:intergenic | 10.0% |
| !!! | TATACTACTTTTTTTTTTAA+TGG | - | chr3_3:39268744-39268763 | None:intergenic | 10.0% |
| !! | TTATTAAGAACATTATATTA+AGG | + | chr3_3:39269279-39269298 | Msa0451400:three_prime_UTR | 10.0% |
| !! | TTAAATATTAAACAATGTTA+GGG | - | chr3_3:39267716-39267735 | None:intergenic | 10.0% |
| !! | AATAAAAAATATTAACAATG+TGG | - | chr3_3:39268169-39268188 | None:intergenic | 10.0% |
| !!! | TATACTACTTTTTTTTTTAA+TGG | - | chr3_3:39268744-39268763 | None:intergenic | 10.0% |
| !! | TTATTAAGAACATTATATTA+AGG | + | chr3_3:39269279-39269298 | Msa0451400:three_prime_UTR | 10.0% |
| !!! | AATTTTGAATAATGAAGTTA+GGG | - | chr3_3:39267653-39267672 | None:intergenic | 15.0% |
| !!! | AAATTTTGAATAATGAAGTT+AGG | - | chr3_3:39267654-39267673 | None:intergenic | 15.0% |
| !! | CTTAAATATTAAACAATGTT+AGG | - | chr3_3:39267717-39267736 | None:intergenic | 15.0% |
| !! | TGAAACAAATATTATGAAAT+AGG | - | chr3_3:39268232-39268251 | None:intergenic | 15.0% |
| !! | TAATATTTGTTTCAAATAAC+AGG | + | chr3_3:39268238-39268257 | Msa0451400:intron | 15.0% |
| !! | TTAAATCCATATACATAAAA+GGG | - | chr3_3:39268501-39268520 | None:intergenic | 15.0% |
| !! | ATATATATTAAAACAAGAGA+TGG | - | chr3_3:39268716-39268735 | None:intergenic | 15.0% |
| !! | ATCAAACAAACTAATTAATT+AGG | - | chr3_3:39269246-39269265 | None:intergenic | 15.0% |
| !!! | ATTAATTAGTTTGTTTGATT+TGG | + | chr3_3:39269247-39269266 | Msa0451400:three_prime_UTR | 15.0% |
| !! | TTTAATTAATGAAAGCTTTA+TGG | + | chr3_3:39269382-39269401 | Msa0451400:three_prime_UTR | 15.0% |
| !!! | AATTTTGAATAATGAAGTTA+GGG | - | chr3_3:39267653-39267672 | None:intergenic | 15.0% |
| !!! | AAATTTTGAATAATGAAGTT+AGG | - | chr3_3:39267654-39267673 | None:intergenic | 15.0% |
| !! | CTTAAATATTAAACAATGTT+AGG | - | chr3_3:39267717-39267736 | None:intergenic | 15.0% |
| !! | TGAAACAAATATTATGAAAT+AGG | - | chr3_3:39268232-39268251 | None:intergenic | 15.0% |
| !! | TAATATTTGTTTCAAATAAC+AGG | + | chr3_3:39268238-39268257 | Msa0451400:intron | 15.0% |
| !! | TTAAATCCATATACATAAAA+GGG | - | chr3_3:39268501-39268520 | None:intergenic | 15.0% |
| !! | ATATATATTAAAACAAGAGA+TGG | - | chr3_3:39268716-39268735 | None:intergenic | 15.0% |
| !! | ATCAAACAAACTAATTAATT+AGG | - | chr3_3:39269246-39269265 | None:intergenic | 15.0% |
| !!! | ATTAATTAGTTTGTTTGATT+TGG | + | chr3_3:39269247-39269266 | Msa0451400:three_prime_UTR | 15.0% |
| !! | TTTAATTAATGAAAGCTTTA+TGG | + | chr3_3:39269382-39269401 | Msa0451400:three_prime_UTR | 15.0% |
| !! | TACATGGTTAGTATAAATAT+TGG | - | chr3_3:39267679-39267698 | None:intergenic | 20.0% |
| !! | AGCTAAACTAAAATTTAATG+TGG | - | chr3_3:39268293-39268312 | None:intergenic | 20.0% |
| !!! | TTAAATTTTAGTTTAGCTAG+TGG | + | chr3_3:39268295-39268314 | Msa0451400:intron | 20.0% |
| !!! | TGAATAAAGTCCTTTTTATA+GGG | - | chr3_3:39268340-39268359 | None:intergenic | 20.0% |
| !!! | ATGAATAAAGTCCTTTTTAT+AGG | - | chr3_3:39268341-39268360 | None:intergenic | 20.0% |
| !! | GTTAAATCCATATACATAAA+AGG | - | chr3_3:39268502-39268521 | None:intergenic | 20.0% |
| !! | TAATACTACTTATCTTTCTA+AGG | - | chr3_3:39268540-39268559 | None:intergenic | 20.0% |
| !!! | GTTTTGATAAGTAGTATATT+TGG | + | chr3_3:39268601-39268620 | Msa0451400:intron | 20.0% |
| !! | ACTATGATCAATTAATTTCA+TGG | - | chr3_3:39269217-39269236 | None:intergenic | 20.0% |
| !! | TACATGGTTAGTATAAATAT+TGG | - | chr3_3:39267679-39267698 | None:intergenic | 20.0% |
| !! | AGCTAAACTAAAATTTAATG+TGG | - | chr3_3:39268293-39268312 | None:intergenic | 20.0% |
| !!! | TTAAATTTTAGTTTAGCTAG+TGG | + | chr3_3:39268295-39268314 | Msa0451400:intron | 20.0% |
| !!! | TGAATAAAGTCCTTTTTATA+GGG | - | chr3_3:39268340-39268359 | None:intergenic | 20.0% |
| !!! | ATGAATAAAGTCCTTTTTAT+AGG | - | chr3_3:39268341-39268360 | None:intergenic | 20.0% |
| !! | GTTAAATCCATATACATAAA+AGG | - | chr3_3:39268502-39268521 | None:intergenic | 20.0% |
| !! | TAATACTACTTATCTTTCTA+AGG | - | chr3_3:39268540-39268559 | None:intergenic | 20.0% |
| !!! | GTTTTGATAAGTAGTATATT+TGG | + | chr3_3:39268601-39268620 | Msa0451400:intron | 20.0% |
| !! | ACTATGATCAATTAATTTCA+TGG | - | chr3_3:39269217-39269236 | None:intergenic | 20.0% |
| !!! | ATGTCATTTTCCCTATAAAA+AGG | + | chr3_3:39268327-39268346 | Msa0451400:intron | 25.0% |
| !!! | ACAGATTAGTAGTTTTAACA+AGG | + | chr3_3:39268802-39268821 | Msa0451400:intron | 25.0% |
| ! | ATCAATTAATTTCATGGTCT+AGG | - | chr3_3:39269211-39269230 | None:intergenic | 25.0% |
| !!! | ATGTCATTTTCCCTATAAAA+AGG | + | chr3_3:39268327-39268346 | Msa0451400:intron | 25.0% |
| !!! | ACAGATTAGTAGTTTTAACA+AGG | + | chr3_3:39268802-39268821 | Msa0451400:intron | 25.0% |
| ! | ATCAATTAATTTCATGGTCT+AGG | - | chr3_3:39269211-39269230 | None:intergenic | 25.0% |
| GAACATTGAAAAGGAAACAT+AGG | - | chr3_3:39267512-39267531 | None:intergenic | 30.0% | |
| GGTTACTAGATATAACTACA+TGG | - | chr3_3:39267695-39267714 | None:intergenic | 30.0% | |
| TCTTGTCTTTAACATAATGC+AGG | + | chr3_3:39267768-39267787 | Msa0451400:intron | 30.0% | |
| TTCAAATAACAGGAGAGATA+TGG | + | chr3_3:39268248-39268267 | Msa0451400:intron | 30.0% | |
| ! | GAAACACCCTTTTATGTATA+TGG | + | chr3_3:39268492-39268511 | Msa0451400:intron | 30.0% |
| ! | TACTTATCTTTCTAAGGAGT+TGG | - | chr3_3:39268534-39268553 | None:intergenic | 30.0% |
| !! | TTTTCAAGATGGCAAATGAA+GGG | + | chr3_3:39269176-39269195 | Msa0451400:CDS | 30.0% |
| GAACATTGAAAAGGAAACAT+AGG | - | chr3_3:39267512-39267531 | None:intergenic | 30.0% | |
| GGTTACTAGATATAACTACA+TGG | - | chr3_3:39267695-39267714 | None:intergenic | 30.0% | |
| TCTTGTCTTTAACATAATGC+AGG | + | chr3_3:39267768-39267787 | Msa0451400:intron | 30.0% | |
| TTCAAATAACAGGAGAGATA+TGG | + | chr3_3:39268248-39268267 | Msa0451400:intron | 30.0% | |
| ! | GAAACACCCTTTTATGTATA+TGG | + | chr3_3:39268492-39268511 | Msa0451400:intron | 30.0% |
| ! | TACTTATCTTTCTAAGGAGT+TGG | - | chr3_3:39268534-39268553 | None:intergenic | 30.0% |
| !! | TTTTCAAGATGGCAAATGAA+GGG | + | chr3_3:39269176-39269195 | Msa0451400:CDS | 30.0% |
| TTCCTACCATCAAGAAATCA+TGG | + | chr3_3:39267474-39267493 | Msa0451400:exon | 35.0% | |
| TCCTACCATCAAGAAATCAT+GGG | + | chr3_3:39267475-39267494 | Msa0451400:exon | 35.0% | |
| ! | AAGCACTGTGAACATTGAAA+AGG | - | chr3_3:39267521-39267540 | None:intergenic | 35.0% |
| GAATCAGAGAAAACTGATGA+AGG | - | chr3_3:39267616-39267635 | None:intergenic | 35.0% | |
| TTATAGTATCCACCACTTGA+TGG | - | chr3_3:39267987-39268006 | None:intergenic | 35.0% | |
| TAGGGAAAATGACATAACAC+TGG | - | chr3_3:39268322-39268341 | None:intergenic | 35.0% | |
| ! | TTTCTGTGATTTTCAGCTAC+TGG | + | chr3_3:39268873-39268892 | Msa0451400:intron | 35.0% |
| GACTCATCCAGGAATAATAT+GGG | + | chr3_3:39268898-39268917 | Msa0451400:CDS | 35.0% | |
| ACTCATCCAGGAATAATATG+GGG | + | chr3_3:39268899-39268918 | Msa0451400:CDS | 35.0% | |
| AGAATTCCCCATATTATTCC+TGG | - | chr3_3:39268908-39268927 | None:intergenic | 35.0% | |
| GGAATAATATGGGGAATTCT+AGG | + | chr3_3:39268908-39268927 | Msa0451400:CDS | 35.0% | |
| TAATATGGGGAATTCTAGGT+TGG | + | chr3_3:39268912-39268931 | Msa0451400:CDS | 35.0% | |
| GAAATATGGGAAATGCCTTT+GGG | + | chr3_3:39268939-39268958 | Msa0451400:CDS | 35.0% | |
| AAATATGGGAAATGCCTTTG+GGG | + | chr3_3:39268940-39268959 | Msa0451400:CDS | 35.0% | |
| TAAACCATCAGTTCTTGTGT+TGG | - | chr3_3:39269017-39269036 | None:intergenic | 35.0% | |
| AACACAAGAACTGATGGTTT+AGG | + | chr3_3:39269016-39269035 | Msa0451400:CDS | 35.0% | |
| TAACTTGGTCAGTTGTGTAA+GGG | - | chr3_3:39269099-39269118 | None:intergenic | 35.0% | |
| TTACACAACTGACCAAGTTA+GGG | + | chr3_3:39269099-39269118 | Msa0451400:CDS | 35.0% | |
| CTTCATTTGCCATCTTGAAA+AGG | - | chr3_3:39269177-39269196 | None:intergenic | 35.0% | |
| !! | CTTTTCAAGATGGCAAATGA+AGG | + | chr3_3:39269175-39269194 | Msa0451400:CDS | 35.0% |
| TTCCTACCATCAAGAAATCA+TGG | + | chr3_3:39267474-39267493 | Msa0451400:exon | 35.0% | |
| TCCTACCATCAAGAAATCAT+GGG | + | chr3_3:39267475-39267494 | Msa0451400:exon | 35.0% | |
| ! | AAGCACTGTGAACATTGAAA+AGG | - | chr3_3:39267521-39267540 | None:intergenic | 35.0% |
| GAATCAGAGAAAACTGATGA+AGG | - | chr3_3:39267616-39267635 | None:intergenic | 35.0% | |
| TTATAGTATCCACCACTTGA+TGG | - | chr3_3:39267987-39268006 | None:intergenic | 35.0% | |
| TAGGGAAAATGACATAACAC+TGG | - | chr3_3:39268322-39268341 | None:intergenic | 35.0% | |
| ! | TTTCTGTGATTTTCAGCTAC+TGG | + | chr3_3:39268873-39268892 | Msa0451400:intron | 35.0% |
| GACTCATCCAGGAATAATAT+GGG | + | chr3_3:39268898-39268917 | Msa0451400:CDS | 35.0% | |
| ACTCATCCAGGAATAATATG+GGG | + | chr3_3:39268899-39268918 | Msa0451400:CDS | 35.0% | |
| AGAATTCCCCATATTATTCC+TGG | - | chr3_3:39268908-39268927 | None:intergenic | 35.0% | |
| GGAATAATATGGGGAATTCT+AGG | + | chr3_3:39268908-39268927 | Msa0451400:CDS | 35.0% | |
| TAATATGGGGAATTCTAGGT+TGG | + | chr3_3:39268912-39268931 | Msa0451400:CDS | 35.0% | |
| GAAATATGGGAAATGCCTTT+GGG | + | chr3_3:39268939-39268958 | Msa0451400:CDS | 35.0% | |
| AAATATGGGAAATGCCTTTG+GGG | + | chr3_3:39268940-39268959 | Msa0451400:CDS | 35.0% | |
| TAAACCATCAGTTCTTGTGT+TGG | - | chr3_3:39269017-39269036 | None:intergenic | 35.0% | |
| AACACAAGAACTGATGGTTT+AGG | + | chr3_3:39269016-39269035 | Msa0451400:CDS | 35.0% | |
| TAACTTGGTCAGTTGTGTAA+GGG | - | chr3_3:39269099-39269118 | None:intergenic | 35.0% | |
| TTACACAACTGACCAAGTTA+GGG | + | chr3_3:39269099-39269118 | Msa0451400:CDS | 35.0% | |
| CTTCATTTGCCATCTTGAAA+AGG | - | chr3_3:39269177-39269196 | None:intergenic | 35.0% | |
| !! | CTTTTCAAGATGGCAAATGA+AGG | + | chr3_3:39269175-39269194 | Msa0451400:CDS | 35.0% |
| AATAAGAGAAGTGAGTGAGG+AGG | - | chr3_3:39267441-39267460 | None:intergenic | 40.0% | |
| TGGAATAAGAGAAGTGAGTG+AGG | - | chr3_3:39267444-39267463 | None:intergenic | 40.0% | |
| ATGGTAGGAAGAAAGTGAGA+TGG | - | chr3_3:39267464-39267483 | None:intergenic | 40.0% | |
| CCTACCATCAAGAAATCATG+GGG | + | chr3_3:39267476-39267495 | Msa0451400:exon | 40.0% | |
| TCTTCCCCATGATTTCTTGA+TGG | - | chr3_3:39267483-39267502 | None:intergenic | 40.0% | |
| GAGATTGCAAGAATCACAAG+GGG | - | chr3_3:39267562-39267581 | None:intergenic | 40.0% | |
| GGAGATTGCAAGAATCACAA+GGG | - | chr3_3:39267563-39267582 | None:intergenic | 40.0% | |
| TGGAGATTGCAAGAATCACA+AGG | - | chr3_3:39267564-39267583 | None:intergenic | 40.0% | |
| TGAATGTGGAACTTCAACAG+TGG | - | chr3_3:39267587-39267606 | None:intergenic | 40.0% | |
| ACTGTTGAAGTTCCACATTC+AGG | + | chr3_3:39267586-39267605 | Msa0451400:CDS | 40.0% | |
| GAATATCCACATCCAGTTGA+AGG | - | chr3_3:39267894-39267913 | None:intergenic | 40.0% | |
| ! | GGATTATGTGATGGTGTTGA+TGG | - | chr3_3:39267939-39267958 | None:intergenic | 40.0% |
| !! | GAAGGTGTTGGATTATGTGA+TGG | - | chr3_3:39267948-39267967 | None:intergenic | 40.0% |
| !! | TTTGATGGTGTTGAAGGTGT+TGG | - | chr3_3:39267960-39267979 | None:intergenic | 40.0% |
| CAACTTACTTGCAAGTTCCA+GGG | - | chr3_3:39268133-39268152 | None:intergenic | 40.0% | |
| GGACTCATCCAGGAATAATA+TGG | + | chr3_3:39268897-39268916 | Msa0451400:CDS | 40.0% | |
| GGAAATATGGGAAATGCCTT+TGG | + | chr3_3:39268938-39268957 | Msa0451400:CDS | 40.0% | |
| TGGAATATTAGTCACCCCAA+AGG | - | chr3_3:39268957-39268976 | None:intergenic | 40.0% | |
| ! | TTTGGGGTGACTAATATTCC+AGG | + | chr3_3:39268956-39268975 | Msa0451400:CDS | 40.0% |
| TTGGGGTGACTAATATTCCA+GGG | + | chr3_3:39268957-39268976 | Msa0451400:CDS | 40.0% | |
| AATATTCCAGGGTTTACTCC+TGG | + | chr3_3:39268968-39268987 | Msa0451400:CDS | 40.0% | |
| CTTTCCAACACAAGAACTGA+TGG | + | chr3_3:39269010-39269029 | Msa0451400:CDS | 40.0% | |
| TGCTTCATTCCTTAACTCCT+TGG | + | chr3_3:39269060-39269079 | Msa0451400:CDS | 40.0% | |
| CTAACTTGGTCAGTTGTGTA+AGG | - | chr3_3:39269100-39269119 | None:intergenic | 40.0% | |
| CTTACACAACTGACCAAGTT+AGG | + | chr3_3:39269098-39269117 | Msa0451400:CDS | 40.0% | |
| ATCATCACTTCACTCCAACA+AGG | + | chr3_3:39269132-39269151 | Msa0451400:CDS | 40.0% | |
| !! | ACAAGCTCACCTTTTCAAGA+TGG | + | chr3_3:39269165-39269184 | Msa0451400:CDS | 40.0% |
| AATAAGAGAAGTGAGTGAGG+AGG | - | chr3_3:39267441-39267460 | None:intergenic | 40.0% | |
| TGGAATAAGAGAAGTGAGTG+AGG | - | chr3_3:39267444-39267463 | None:intergenic | 40.0% | |
| ATGGTAGGAAGAAAGTGAGA+TGG | - | chr3_3:39267464-39267483 | None:intergenic | 40.0% | |
| CCTACCATCAAGAAATCATG+GGG | + | chr3_3:39267476-39267495 | Msa0451400:exon | 40.0% | |
| TCTTCCCCATGATTTCTTGA+TGG | - | chr3_3:39267483-39267502 | None:intergenic | 40.0% | |
| GAGATTGCAAGAATCACAAG+GGG | - | chr3_3:39267562-39267581 | None:intergenic | 40.0% | |
| GGAGATTGCAAGAATCACAA+GGG | - | chr3_3:39267563-39267582 | None:intergenic | 40.0% | |
| TGGAGATTGCAAGAATCACA+AGG | - | chr3_3:39267564-39267583 | None:intergenic | 40.0% | |
| TGAATGTGGAACTTCAACAG+TGG | - | chr3_3:39267587-39267606 | None:intergenic | 40.0% | |
| ACTGTTGAAGTTCCACATTC+AGG | + | chr3_3:39267586-39267605 | Msa0451400:CDS | 40.0% | |
| GAATATCCACATCCAGTTGA+AGG | - | chr3_3:39267894-39267913 | None:intergenic | 40.0% | |
| ! | GGATTATGTGATGGTGTTGA+TGG | - | chr3_3:39267939-39267958 | None:intergenic | 40.0% |
| !! | GAAGGTGTTGGATTATGTGA+TGG | - | chr3_3:39267948-39267967 | None:intergenic | 40.0% |
| !! | TTTGATGGTGTTGAAGGTGT+TGG | - | chr3_3:39267960-39267979 | None:intergenic | 40.0% |
| CAACTTACTTGCAAGTTCCA+GGG | - | chr3_3:39268133-39268152 | None:intergenic | 40.0% | |
| GGACTCATCCAGGAATAATA+TGG | + | chr3_3:39268897-39268916 | Msa0451400:CDS | 40.0% | |
| GGAAATATGGGAAATGCCTT+TGG | + | chr3_3:39268938-39268957 | Msa0451400:CDS | 40.0% | |
| TGGAATATTAGTCACCCCAA+AGG | - | chr3_3:39268957-39268976 | None:intergenic | 40.0% | |
| ! | TTTGGGGTGACTAATATTCC+AGG | + | chr3_3:39268956-39268975 | Msa0451400:CDS | 40.0% |
| TTGGGGTGACTAATATTCCA+GGG | + | chr3_3:39268957-39268976 | Msa0451400:CDS | 40.0% | |
| AATATTCCAGGGTTTACTCC+TGG | + | chr3_3:39268968-39268987 | Msa0451400:CDS | 40.0% | |
| CTTTCCAACACAAGAACTGA+TGG | + | chr3_3:39269010-39269029 | Msa0451400:CDS | 40.0% | |
| TGCTTCATTCCTTAACTCCT+TGG | + | chr3_3:39269060-39269079 | Msa0451400:CDS | 40.0% | |
| CTAACTTGGTCAGTTGTGTA+AGG | - | chr3_3:39269100-39269119 | None:intergenic | 40.0% | |
| CTTACACAACTGACCAAGTT+AGG | + | chr3_3:39269098-39269117 | Msa0451400:CDS | 40.0% | |
| ATCATCACTTCACTCCAACA+AGG | + | chr3_3:39269132-39269151 | Msa0451400:CDS | 40.0% | |
| !! | ACAAGCTCACCTTTTCAAGA+TGG | + | chr3_3:39269165-39269184 | Msa0451400:CDS | 40.0% |
| ! | TTTTGTAGTGGTGTGGAGTG+AGG | - | chr3_3:39267418-39267437 | None:intergenic | 45.0% |
| !! | TGAGTGAGGAGGTTTTGTAG+TGG | - | chr3_3:39267430-39267449 | None:intergenic | 45.0% |
| ! | CCCCATGATTTCTTGATGGT+AGG | - | chr3_3:39267479-39267498 | None:intergenic | 45.0% |
| ATGTGGAACTTCAACAGTGG+TGG | - | chr3_3:39267584-39267603 | None:intergenic | 45.0% | |
| GATGAAGGAGTTCCTGAATG+TGG | - | chr3_3:39267601-39267620 | None:intergenic | 45.0% | |
| !! | ATGGAGAAGTACTCCTGTGT+GGG | - | chr3_3:39267794-39267813 | None:intergenic | 45.0% |
| !! | AGGAGTACTTCTCCATCTCA+TGG | + | chr3_3:39267798-39267817 | Msa0451400:CDS | 45.0% |
| TATCCACATCCAGTTGAAGG+TGG | - | chr3_3:39267891-39267910 | None:intergenic | 45.0% | |
| GATGGTGTAGAAGGATCATG+TGG | - | chr3_3:39267921-39267940 | None:intergenic | 45.0% | |
| !! | GATGGTGTTGATGGTGTAGA+AGG | - | chr3_3:39267930-39267949 | None:intergenic | 45.0% |
| AGTATCCACCACTTGATGGA+GGG | - | chr3_3:39267983-39268002 | None:intergenic | 45.0% | |
| TAGTATCCACCACTTGATGG+AGG | - | chr3_3:39267984-39268003 | None:intergenic | 45.0% | |
| ! | AAAGTGACTGGTGGATCAGT+TGG | - | chr3_3:39268026-39268045 | None:intergenic | 45.0% |
| !! | TCTATTGGTGTCGATGGAGA+TGG | - | chr3_3:39268056-39268075 | None:intergenic | 45.0% |
| AAAGGTGGTGTAGGAACAGT+AGG | - | chr3_3:39268089-39268108 | None:intergenic | 45.0% | |
| TACTTGCAAGTTCCAGGGAA+GGG | - | chr3_3:39268128-39268147 | None:intergenic | 45.0% | |
| TTACTTGCAAGTTCCAGGGA+AGG | - | chr3_3:39268129-39268148 | None:intergenic | 45.0% | |
| GCAACTTACTTGCAAGTTCC+AGG | - | chr3_3:39268134-39268153 | None:intergenic | 45.0% | |
| ! | CTGTGATTTTCAGCTACTGG+AGG | + | chr3_3:39268876-39268895 | Msa0451400:intron | 45.0% |
| ! | TATGGGGAATTCTAGGTTGG+TGG | + | chr3_3:39268915-39268934 | Msa0451400:CDS | 45.0% |
| !! | ATGGGGAATTCTAGGTTGGT+GGG | + | chr3_3:39268916-39268935 | Msa0451400:CDS | 45.0% |
| !! | TCTAGGTTGGTGGGGAAATA+TGG | + | chr3_3:39268925-39268944 | Msa0451400:CDS | 45.0% |
| !! | CTAGGTTGGTGGGGAAATAT+GGG | + | chr3_3:39268926-39268945 | Msa0451400:CDS | 45.0% |
| !! | GTTGGAAAGTGCTTGTGGTA+AGG | - | chr3_3:39268999-39269018 | None:intergenic | 45.0% |
| !! | CTTGTGTTGGAAAGTGCTTG+TGG | - | chr3_3:39269004-39269023 | None:intergenic | 45.0% |
| !! | TTAGGAGCACTCTACAGAGA+AGG | + | chr3_3:39269034-39269053 | Msa0451400:CDS | 45.0% |
| TGTGGTTCACCAAGGAGTTA+AGG | - | chr3_3:39269072-39269091 | None:intergenic | 45.0% | |
| CAGTTGTGTAAGGGAACTTG+TGG | - | chr3_3:39269090-39269109 | None:intergenic | 45.0% | |
| ATGCAAACCTGTCCCTAACT+TGG | - | chr3_3:39269114-39269133 | None:intergenic | 45.0% | |
| ! | TTTTGTAGTGGTGTGGAGTG+AGG | - | chr3_3:39267418-39267437 | None:intergenic | 45.0% |
| !! | TGAGTGAGGAGGTTTTGTAG+TGG | - | chr3_3:39267430-39267449 | None:intergenic | 45.0% |
| ! | CCCCATGATTTCTTGATGGT+AGG | - | chr3_3:39267479-39267498 | None:intergenic | 45.0% |
| ATGTGGAACTTCAACAGTGG+TGG | - | chr3_3:39267584-39267603 | None:intergenic | 45.0% | |
| GATGAAGGAGTTCCTGAATG+TGG | - | chr3_3:39267601-39267620 | None:intergenic | 45.0% | |
| !! | ATGGAGAAGTACTCCTGTGT+GGG | - | chr3_3:39267794-39267813 | None:intergenic | 45.0% |
| !! | AGGAGTACTTCTCCATCTCA+TGG | + | chr3_3:39267798-39267817 | Msa0451400:CDS | 45.0% |
| TATCCACATCCAGTTGAAGG+TGG | - | chr3_3:39267891-39267910 | None:intergenic | 45.0% | |
| GATGGTGTAGAAGGATCATG+TGG | - | chr3_3:39267921-39267940 | None:intergenic | 45.0% | |
| !! | GATGGTGTTGATGGTGTAGA+AGG | - | chr3_3:39267930-39267949 | None:intergenic | 45.0% |
| AGTATCCACCACTTGATGGA+GGG | - | chr3_3:39267983-39268002 | None:intergenic | 45.0% | |
| TAGTATCCACCACTTGATGG+AGG | - | chr3_3:39267984-39268003 | None:intergenic | 45.0% | |
| ! | AAAGTGACTGGTGGATCAGT+TGG | - | chr3_3:39268026-39268045 | None:intergenic | 45.0% |
| !! | TCTATTGGTGTCGATGGAGA+TGG | - | chr3_3:39268056-39268075 | None:intergenic | 45.0% |
| AAAGGTGGTGTAGGAACAGT+AGG | - | chr3_3:39268089-39268108 | None:intergenic | 45.0% | |
| TACTTGCAAGTTCCAGGGAA+GGG | - | chr3_3:39268128-39268147 | None:intergenic | 45.0% | |
| TTACTTGCAAGTTCCAGGGA+AGG | - | chr3_3:39268129-39268148 | None:intergenic | 45.0% | |
| GCAACTTACTTGCAAGTTCC+AGG | - | chr3_3:39268134-39268153 | None:intergenic | 45.0% | |
| ! | CTGTGATTTTCAGCTACTGG+AGG | + | chr3_3:39268876-39268895 | Msa0451400:intron | 45.0% |
| ! | TATGGGGAATTCTAGGTTGG+TGG | + | chr3_3:39268915-39268934 | Msa0451400:CDS | 45.0% |
| !! | ATGGGGAATTCTAGGTTGGT+GGG | + | chr3_3:39268916-39268935 | Msa0451400:CDS | 45.0% |
| !! | TCTAGGTTGGTGGGGAAATA+TGG | + | chr3_3:39268925-39268944 | Msa0451400:CDS | 45.0% |
| !! | CTAGGTTGGTGGGGAAATAT+GGG | + | chr3_3:39268926-39268945 | Msa0451400:CDS | 45.0% |
| !! | GTTGGAAAGTGCTTGTGGTA+AGG | - | chr3_3:39268999-39269018 | None:intergenic | 45.0% |
| !! | CTTGTGTTGGAAAGTGCTTG+TGG | - | chr3_3:39269004-39269023 | None:intergenic | 45.0% |
| !! | TTAGGAGCACTCTACAGAGA+AGG | + | chr3_3:39269034-39269053 | Msa0451400:CDS | 45.0% |
| TGTGGTTCACCAAGGAGTTA+AGG | - | chr3_3:39269072-39269091 | None:intergenic | 45.0% | |
| CAGTTGTGTAAGGGAACTTG+TGG | - | chr3_3:39269090-39269109 | None:intergenic | 45.0% | |
| ATGCAAACCTGTCCCTAACT+TGG | - | chr3_3:39269114-39269133 | None:intergenic | 45.0% | |
| !! | GAGGAGGTTTTGTAGTGGTG+TGG | - | chr3_3:39267425-39267444 | None:intergenic | 50.0% |
| AACATAATGCAGGCCCACAC+AGG | + | chr3_3:39267778-39267797 | Msa0451400:intron | 50.0% | |
| !! | GATGGAGAAGTACTCCTGTG+TGG | - | chr3_3:39267795-39267814 | None:intergenic | 50.0% |
| GATGAGCTTCCATGTGAAGG+TGG | - | chr3_3:39267831-39267850 | None:intergenic | 50.0% | |
| GGTGATGAGCTTCCATGTGA+AGG | - | chr3_3:39267834-39267853 | None:intergenic | 50.0% | |
| AGCTCATCACCACCATCACA+TGG | + | chr3_3:39267843-39267862 | Msa0451400:CDS | 50.0% | |
| TCATCACCACCATCACATGG+TGG | + | chr3_3:39267846-39267865 | Msa0451400:CDS | 50.0% | |
| TAAGACCCTCCACCATGTGA+TGG | - | chr3_3:39267858-39267877 | None:intergenic | 50.0% | |
| ACTCCAACACCACCTTCAAC+TGG | + | chr3_3:39267879-39267898 | Msa0451400:CDS | 50.0% | |
| CATCCAGTTGAAGGTGGTGT+TGG | - | chr3_3:39267885-39267904 | None:intergenic | 50.0% | |
| ACACCACCTTCAACTGGATG+TGG | + | chr3_3:39267885-39267904 | Msa0451400:CDS | 50.0% | |
| GGTGTAGAAGGATCATGTGG+TGG | - | chr3_3:39267918-39267937 | None:intergenic | 50.0% | |
| !! | GGAGGGTTTGATGGTGTTGA+AGG | - | chr3_3:39267966-39267985 | None:intergenic | 50.0% |
| CCACTTGATGGAGGGTTTGA+TGG | - | chr3_3:39267975-39267994 | None:intergenic | 50.0% | |
| CCATCAAACCCTCCATCAAG+TGG | + | chr3_3:39267972-39267991 | Msa0451400:CDS | 50.0% | |
| TCAAACCCTCCATCAAGTGG+TGG | + | chr3_3:39267975-39267994 | Msa0451400:CDS | 50.0% | |
| !! | GGATCAGTTGGAGTTGATGG+TGG | - | chr3_3:39268014-39268033 | None:intergenic | 50.0% |
| GGTGGATCAGTTGGAGTTGA+TGG | - | chr3_3:39268017-39268036 | None:intergenic | 50.0% | |
| ! | GATGGTGGTGTCAAAGTGAC+TGG | - | chr3_3:39268038-39268057 | None:intergenic | 50.0% |
| !! | ATTGGTGTCGATGGAGATGG+TGG | - | chr3_3:39268053-39268072 | None:intergenic | 50.0% |
| !! | CCAGGATCTATTGGTGTCGA+TGG | - | chr3_3:39268062-39268081 | None:intergenic | 50.0% |
| CCATCGACACCAATAGATCC+TGG | + | chr3_3:39268059-39268078 | Msa0451400:CDS | 50.0% | |
| !! | GTAGGAGTGCCAGGATCTAT+TGG | - | chr3_3:39268071-39268090 | None:intergenic | 50.0% |
| GAAGGAAGGAAAGGTGGTGT+AGG | - | chr3_3:39268098-39268117 | None:intergenic | 50.0% | |
| AAGTTCCAGGGAAGGGAGAT+GGG | - | chr3_3:39268121-39268140 | None:intergenic | 50.0% | |
| !! | TGGGGAATTCTAGGTTGGTG+GGG | + | chr3_3:39268917-39268936 | Msa0451400:CDS | 50.0% |
| GTTAGACCAGGAGTAAACCC+TGG | - | chr3_3:39268977-39268996 | None:intergenic | 50.0% | |
| GCTTGTGGTAAGGTTAGACC+AGG | - | chr3_3:39268989-39269008 | None:intergenic | 50.0% | |
| AGGGAACTTGTGGTTCACCA+AGG | - | chr3_3:39269080-39269099 | None:intergenic | 50.0% | |
| CAACTGACCAAGTTAGGGAC+AGG | + | chr3_3:39269104-39269123 | Msa0451400:CDS | 50.0% | |
| ! | TTGTGTTGCAGCAGCCTTGT+TGG | - | chr3_3:39269149-39269168 | None:intergenic | 50.0% |
| !! | GAGGAGGTTTTGTAGTGGTG+TGG | - | chr3_3:39267425-39267444 | None:intergenic | 50.0% |
| AACATAATGCAGGCCCACAC+AGG | + | chr3_3:39267778-39267797 | Msa0451400:intron | 50.0% | |
| !! | GATGGAGAAGTACTCCTGTG+TGG | - | chr3_3:39267795-39267814 | None:intergenic | 50.0% |
| GATGAGCTTCCATGTGAAGG+TGG | - | chr3_3:39267831-39267850 | None:intergenic | 50.0% | |
| GGTGATGAGCTTCCATGTGA+AGG | - | chr3_3:39267834-39267853 | None:intergenic | 50.0% | |
| AGCTCATCACCACCATCACA+TGG | + | chr3_3:39267843-39267862 | Msa0451400:CDS | 50.0% | |
| TCATCACCACCATCACATGG+TGG | + | chr3_3:39267846-39267865 | Msa0451400:CDS | 50.0% | |
| TAAGACCCTCCACCATGTGA+TGG | - | chr3_3:39267858-39267877 | None:intergenic | 50.0% | |
| ACTCCAACACCACCTTCAAC+TGG | + | chr3_3:39267879-39267898 | Msa0451400:CDS | 50.0% | |
| CATCCAGTTGAAGGTGGTGT+TGG | - | chr3_3:39267885-39267904 | None:intergenic | 50.0% | |
| ACACCACCTTCAACTGGATG+TGG | + | chr3_3:39267885-39267904 | Msa0451400:CDS | 50.0% | |
| GGTGTAGAAGGATCATGTGG+TGG | - | chr3_3:39267918-39267937 | None:intergenic | 50.0% | |
| !! | GGAGGGTTTGATGGTGTTGA+AGG | - | chr3_3:39267966-39267985 | None:intergenic | 50.0% |
| CCACTTGATGGAGGGTTTGA+TGG | - | chr3_3:39267975-39267994 | None:intergenic | 50.0% | |
| CCATCAAACCCTCCATCAAG+TGG | + | chr3_3:39267972-39267991 | Msa0451400:CDS | 50.0% | |
| TCAAACCCTCCATCAAGTGG+TGG | + | chr3_3:39267975-39267994 | Msa0451400:CDS | 50.0% | |
| !! | GGATCAGTTGGAGTTGATGG+TGG | - | chr3_3:39268014-39268033 | None:intergenic | 50.0% |
| GGTGGATCAGTTGGAGTTGA+TGG | - | chr3_3:39268017-39268036 | None:intergenic | 50.0% | |
| ! | GATGGTGGTGTCAAAGTGAC+TGG | - | chr3_3:39268038-39268057 | None:intergenic | 50.0% |
| !! | ATTGGTGTCGATGGAGATGG+TGG | - | chr3_3:39268053-39268072 | None:intergenic | 50.0% |
| !! | CCAGGATCTATTGGTGTCGA+TGG | - | chr3_3:39268062-39268081 | None:intergenic | 50.0% |
| CCATCGACACCAATAGATCC+TGG | + | chr3_3:39268059-39268078 | Msa0451400:CDS | 50.0% | |
| !! | GTAGGAGTGCCAGGATCTAT+TGG | - | chr3_3:39268071-39268090 | None:intergenic | 50.0% |
| GAAGGAAGGAAAGGTGGTGT+AGG | - | chr3_3:39268098-39268117 | None:intergenic | 50.0% | |
| AAGTTCCAGGGAAGGGAGAT+GGG | - | chr3_3:39268121-39268140 | None:intergenic | 50.0% | |
| !! | TGGGGAATTCTAGGTTGGTG+GGG | + | chr3_3:39268917-39268936 | Msa0451400:CDS | 50.0% |
| GTTAGACCAGGAGTAAACCC+TGG | - | chr3_3:39268977-39268996 | None:intergenic | 50.0% | |
| GCTTGTGGTAAGGTTAGACC+AGG | - | chr3_3:39268989-39269008 | None:intergenic | 50.0% | |
| AGGGAACTTGTGGTTCACCA+AGG | - | chr3_3:39269080-39269099 | None:intergenic | 50.0% | |
| CAACTGACCAAGTTAGGGAC+AGG | + | chr3_3:39269104-39269123 | Msa0451400:CDS | 50.0% | |
| ! | TTGTGTTGCAGCAGCCTTGT+TGG | - | chr3_3:39269149-39269168 | None:intergenic | 50.0% |
| GGTGGTGAGCTTCCATGAGA+TGG | - | chr3_3:39267813-39267832 | None:intergenic | 55.0% | |
| GGAAGCTCACCACCTTCACA+TGG | + | chr3_3:39267819-39267838 | Msa0451400:CDS | 55.0% | |
| TCACCACCATCACATGGTGG+AGG | + | chr3_3:39267849-39267868 | Msa0451400:CDS | 55.0% | |
| ! | CACCACCATCACATGGTGGA+GGG | + | chr3_3:39267850-39267869 | Msa0451400:CDS | 55.0% |
| ! | GGTGGTGTCAAAGTGACTGG+TGG | - | chr3_3:39268035-39268054 | None:intergenic | 55.0% |
| !! | GTAGGAACAGTAGGAGTGCC+AGG | - | chr3_3:39268080-39268099 | None:intergenic | 55.0% |
| GATGGGGAAGGAAGGAAAGG+TGG | - | chr3_3:39268104-39268123 | None:intergenic | 55.0% | |
| GGAGATGGGGAAGGAAGGAA+AGG | - | chr3_3:39268107-39268126 | None:intergenic | 55.0% | |
| AGTTCCAGGGAAGGGAGATG+GGG | - | chr3_3:39268120-39268139 | None:intergenic | 55.0% | |
| CAAGTTCCAGGGAAGGGAGA+TGG | - | chr3_3:39268122-39268141 | None:intergenic | 55.0% | |
| AGCTACTGGAGGACTCATCC+AGG | + | chr3_3:39268887-39268906 | Msa0451400:intron | 55.0% | |
| GGTGGTGAGCTTCCATGAGA+TGG | - | chr3_3:39267813-39267832 | None:intergenic | 55.0% | |
| GGAAGCTCACCACCTTCACA+TGG | + | chr3_3:39267819-39267838 | Msa0451400:CDS | 55.0% | |
| TCACCACCATCACATGGTGG+AGG | + | chr3_3:39267849-39267868 | Msa0451400:CDS | 55.0% | |
| ! | CACCACCATCACATGGTGGA+GGG | + | chr3_3:39267850-39267869 | Msa0451400:CDS | 55.0% |
| ! | GGTGGTGTCAAAGTGACTGG+TGG | - | chr3_3:39268035-39268054 | None:intergenic | 55.0% |
| !! | GTAGGAACAGTAGGAGTGCC+AGG | - | chr3_3:39268080-39268099 | None:intergenic | 55.0% |
| GATGGGGAAGGAAGGAAAGG+TGG | - | chr3_3:39268104-39268123 | None:intergenic | 55.0% | |
| GGAGATGGGGAAGGAAGGAA+AGG | - | chr3_3:39268107-39268126 | None:intergenic | 55.0% | |
| AGTTCCAGGGAAGGGAGATG+GGG | - | chr3_3:39268120-39268139 | None:intergenic | 55.0% | |
| CAAGTTCCAGGGAAGGGAGA+TGG | - | chr3_3:39268122-39268141 | None:intergenic | 55.0% | |
| AGCTACTGGAGGACTCATCC+AGG | + | chr3_3:39268887-39268906 | Msa0451400:intron | 55.0% | |
| GACCCTCCACCATGTGATGG+TGG | - | chr3_3:39267855-39267874 | None:intergenic | 60.0% | |
| GGAAGGGAGATGGGGAAGGA+AGG | - | chr3_3:39268112-39268131 | None:intergenic | 60.0% | |
| GACCCTCCACCATGTGATGG+TGG | - | chr3_3:39267855-39267874 | None:intergenic | 60.0% | |
| GGAAGGGAGATGGGGAAGGA+AGG | - | chr3_3:39268112-39268131 | None:intergenic | 60.0% | |
| CCAGGGAAGGGAGATGGGGA+AGG | - | chr3_3:39268116-39268135 | None:intergenic | 65.0% | |
| CCTTCCCCATCTCCCTTCCC+TGG | + | chr3_3:39268113-39268132 | Msa0451400:CDS | 65.0% | |
| CCAGGGAAGGGAGATGGGGA+AGG | - | chr3_3:39268116-39268135 | None:intergenic | 65.0% | |
| CCTTCCCCATCTCCCTTCCC+TGG | + | chr3_3:39268113-39268132 | Msa0451400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 39267407 | 39269412 | 39267407 | ID=Msa0451400;Name=Msa0451400 |
| chr3_3 | mRNA | 39267407 | 39269412 | 39267407 | ID=Msa0451400-mRNA-1;Parent=Msa0451400;Name=Msa0451400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=86|1|1|1|1|1|3|193|277 |
| chr3_3 | exon | 39267407 | 39267640 | 39267407 | ID=Msa0451400-mRNA-1:exon:7129;Parent=Msa0451400-mRNA-1 |
| chr3_3 | exon | 39267790 | 39268144 | 39267790 | ID=Msa0451400-mRNA-1:exon:7130;Parent=Msa0451400-mRNA-1 |
| chr3_3 | exon | 39268889 | 39269412 | 39268889 | ID=Msa0451400-mRNA-1:exon:7131;Parent=Msa0451400-mRNA-1 |
| chr3_3 | five_prime_UTR | 39267407 | 39267492 | 39267407 | ID=Msa0451400-mRNA-1:five_prime_utr;Parent=Msa0451400-mRNA-1 |
| chr3_3 | CDS | 39267493 | 39267640 | 39267493 | ID=Msa0451400-mRNA-1:cds;Parent=Msa0451400-mRNA-1 |
| chr3_3 | CDS | 39267790 | 39268144 | 39267790 | ID=Msa0451400-mRNA-1:cds;Parent=Msa0451400-mRNA-1 |
| chr3_3 | CDS | 39268889 | 39269219 | 39268889 | ID=Msa0451400-mRNA-1:cds;Parent=Msa0451400-mRNA-1 |
| chr3_3 | three_prime_UTR | 39269220 | 39269412 | 39269220 | ID=Msa0451400-mRNA-1:three_prime_utr;Parent=Msa0451400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
