AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0830030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830030 MtrunA17_Chr2g0312321 99.349 307 1 1 1 307 1 306 0.0 640
Msa0830030 MtrunA17_Chr4g0060931 44.558 294 127 11 1 262 1 290 1.66e-67 214
Msa0830030 MtrunA17_Chr1g0183741 47.280 239 106 5 7 241 6 228 1.77e-67 212
Msa0830030 MtrunA17_Chr6g0484441 47.982 223 108 4 7 226 1 218 2.38e-67 213
Msa0830030 MtrunA17_Chr7g0261411 63.226 155 48 3 7 157 6 155 3.35e-67 211
Msa0830030 MtrunA17_Chr6g0453451 51.724 203 93 3 10 208 19 220 3.07e-65 207
Msa0830030 MtrunA17_Chr7g0253011 55.276 199 70 7 11 192 17 213 6.33e-65 209
Msa0830030 MtrunA17_Chr2g0316971 62.420 157 54 3 8 159 20 176 1.25e-62 202
Msa0830030 MtrunA17_Chr6g0461661 53.723 188 75 5 11 186 18 205 1.49e-61 200
Msa0830030 MtrunA17_Chr3g0091921 51.741 201 81 5 1 187 1 199 1.75e-61 197
Msa0830030 MtrunA17_Chr1g0147421 57.229 166 63 3 8 168 24 186 2.29e-61 199
Msa0830030 MtrunA17_Chr3g0139331 58.333 156 56 4 8 158 8 159 5.49e-59 192
Msa0830030 MtrunA17_Chr2g0309891 56.098 164 68 2 6 165 1 164 6.68e-57 187
Msa0830030 MtrunA17_Chr1g0200561 53.797 158 63 4 7 158 15 168 1.20e-55 184
Msa0830030 MtrunA17_Chr4g0018391 55.128 156 60 4 9 158 5 156 1.21e-55 184
Msa0830030 MtrunA17_Chr4g0056541 54.321 162 66 3 9 165 5 163 7.72e-55 182
Msa0830030 MtrunA17_Chr5g0398971 42.570 249 123 9 1 237 1 241 6.36e-54 179
Msa0830030 MtrunA17_Chr5g0405211 52.532 158 65 4 7 158 4 157 9.86e-54 179
Msa0830030 MtrunA17_Chr8g0372121 49.697 165 75 3 6 165 1 162 1.61e-53 177
Msa0830030 MtrunA17_Chr3g0144271 58.273 139 53 2 8 141 20 158 3.72e-53 179
Msa0830030 MtrunA17_Chr4g0017921 52.500 160 67 3 4 158 1 156 6.23e-53 177
Msa0830030 MtrunA17_Chr7g0217721 42.424 231 109 7 8 217 16 243 1.22e-52 176
Msa0830030 MtrunA17_Chr8g0346001 48.824 170 74 4 8 164 12 181 5.10e-52 176
Msa0830030 MtrunA17_Chr8g0359921 35.093 322 174 8 6 301 9 321 7.70e-52 173
Msa0830030 MtrunA17_Chr3g0109821 51.744 172 76 3 6 173 1 169 5.60e-51 178
Msa0830030 MtrunA17_Chr7g0252971 46.199 171 78 3 8 164 5 175 8.33e-51 171
Msa0830030 MtrunA17_Chr2g0309331 50.955 157 68 4 8 158 7 160 1.44e-50 170
Msa0830030 MtrunA17_Chr2g0318081 49.398 166 74 4 6 166 11 171 4.50e-50 169
Msa0830030 MtrunA17_Chr7g0217711 57.576 132 52 2 8 136 16 146 1.35e-49 162
Msa0830030 MtrunA17_Chr5g0417791 49.351 154 73 3 10 158 2 155 1.98e-49 165
Msa0830030 MtrunA17_Chr6g0481091 47.953 171 84 3 6 172 1 170 2.75e-49 164
Msa0830030 MtrunA17_Chr7g0263931 51.572 159 62 4 8 155 8 162 3.39e-49 166
Msa0830030 MtrunA17_Chr5g0433781 48.087 183 87 4 6 184 1 179 1.37e-48 171
Msa0830030 MtrunA17_Chr3g0124761 40.476 252 116 7 8 227 4 253 1.79e-48 163
Msa0830030 MtrunA17_Chr4g0042561 47.799 159 78 3 5 158 3 161 2.24e-48 162
Msa0830030 MtrunA17_Chr2g0318101 48.485 165 71 4 8 158 12 176 4.03e-48 164
Msa0830030 MtrunA17_Chr8g0384721 41.048 229 112 7 10 225 6 224 4.37e-48 162
Msa0830030 MtrunA17_Chr7g0214071 46.196 184 74 6 8 175 12 186 1.57e-47 160
Msa0830030 MtrunA17_Chr4g0047841 43.979 191 81 4 11 175 15 205 2.04e-47 162
Msa0830030 MtrunA17_Chr6g0453131 49.390 164 72 4 11 163 15 178 1.56e-46 161
Msa0830030 MtrunA17_Chr2g0326361 48.026 152 72 3 11 155 14 165 1.55e-45 157
Msa0830030 MtrunA17_Chr8g0361731 46.199 171 80 4 7 165 10 180 1.11e-44 156
Msa0830030 MtrunA17_Chr3g0130731 50.314 159 74 4 8 162 4 161 1.31e-44 153
Msa0830030 MtrunA17_Chr5g0428991 49.689 161 66 4 10 161 24 178 9.42e-44 158
Msa0830030 MtrunA17_Chr5g0417001 45.087 173 84 4 7 168 10 182 9.97e-44 154
Msa0830030 MtrunA17_Chr3g0128151 48.750 160 67 4 11 161 22 175 1.47e-42 154
Msa0830030 MtrunA17_Chr2g0311661 36.508 252 130 7 13 234 23 274 2.14e-42 147
Msa0830030 MtrunA17_Chr5g0400461 47.024 168 74 4 6 162 1 164 4.41e-42 148
Msa0830030 MtrunA17_Chr3g0130101 49.383 162 68 6 6 158 1 157 6.67e-42 148
Msa0830030 MtrunA17_Chr3g0092671 48.701 154 68 4 13 159 7 156 2.81e-41 150
Msa0830030 MtrunA17_Chr2g0311651 38.174 241 109 8 13 225 24 252 3.27e-41 145
Msa0830030 MtrunA17_Chr4g0076731 38.306 248 130 7 13 251 56 289 3.51e-41 148
Msa0830030 MtrunA17_Chr4g0054791 47.953 171 74 6 6 164 1 168 1.20e-40 144
Msa0830030 MtrunA17_Chr5g0442771 40.094 212 93 6 13 195 20 226 1.27e-40 143
Msa0830030 MtrunA17_Chr1g0197351 47.826 161 69 4 11 159 42 199 4.92e-40 145
Msa0830030 MtrunA17_Chr3g0128111 40.000 200 104 7 14 204 45 237 6.90e-40 140
Msa0830030 MtrunA17_Chr1g0197361 47.712 153 71 4 13 159 10 159 1.92e-39 145
Msa0830030 MtrunA17_Chr8g0364791 43.671 158 82 4 6 158 1 156 1.05e-37 139
Msa0830030 MtrunA17_Chr3g0113001 44.509 173 70 5 58 217 14 173 2.15e-37 135
Msa0830030 MtrunA17_Chr8g0384201 42.767 159 82 4 6 158 1 156 1.16e-36 137
Msa0830030 MtrunA17_Chr4g0038751 43.373 166 78 5 1 158 4 161 1.54e-36 132
Msa0830030 MtrunA17_Chr1g0201021 51.181 127 58 3 13 135 21 147 2.79e-36 137
Msa0830030 MtrunA17_Chr8g0345671 45.395 152 69 5 11 155 11 155 1.03e-34 130
Msa0830030 MtrunA17_Chr3g0131911 39.877 163 85 5 9 160 12 172 4.94e-33 122
Msa0830030 MtrunA17_Chr8g0385991 38.125 160 89 5 9 160 12 169 1.46e-32 120
Msa0830030 MtrunA17_Chr8g0345691 43.421 152 72 5 11 155 12 156 3.13e-32 123
Msa0830030 MtrunA17_Chr2g0321631 41.509 159 76 7 12 156 5 160 1.73e-31 118
Msa0830030 MtrunA17_Chr3g0113031 44.304 158 65 4 72 217 3 149 1.10e-30 116
Msa0830030 MtrunA17_Chr4g0026141 38.650 163 84 6 7 156 1 160 1.38e-30 115
Msa0830030 MtrunA17_Chr2g0321741 42.276 123 61 3 35 155 17 131 2.05e-27 109
Msa0830030 MtrunA17_Chr8g0345711 39.568 139 76 4 2 133 3 140 4.96e-27 103
Msa0830030 MtrunA17_Chr4g0050701 33.690 187 103 5 1 176 1 177 1.33e-26 103
Msa0830030 MtrunA17_Chr8g0345701 41.667 144 60 6 11 133 7 147 1.13e-24 97.8
Msa0830030 MtrunA17_Chr7g0266701 31.792 173 102 5 11 167 4 176 3.68e-24 98.6
Msa0830030 MtrunA17_Chr7g0243371 46.512 86 44 1 63 146 18 103 2.20e-22 90.1
Msa0830030 MtrunA17_Chr8g0384351 35.882 170 82 8 9 175 8 153 6.86e-22 90.9
Msa0830030 MtrunA17_Chr8g0345731 39.850 133 69 6 11 133 24 155 1.71e-21 89.4
Msa0830030 MtrunA17_Chr8g0345721 34.194 155 65 5 14 132 38 191 5.78e-21 89.0
Msa0830030 MtrunA17_Chr8g0345741 38.655 119 65 4 22 133 2 119 8.99e-21 87.0
Msa0830030 MtrunA17_Chr3g0130321 31.217 189 101 7 9 178 5 183 5.73e-20 86.3
Msa0830030 MtrunA17_Chr7g0251651 27.684 177 122 4 10 182 17 191 1.89e-15 73.6
Msa0830030 MtrunA17_Chr7g0251661 27.703 148 99 5 4 146 3 147 4.15e-14 68.9
Msa0830030 MtrunA17_Chr7g0251671 27.632 152 94 5 4 146 3 147 1.39e-13 67.4
Msa0830030 MtrunA17_Chr3g0113011 59.184 49 16 2 10 55 18 65 1.18e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830030 AT1G56010.2 60.248 322 102 10 2 305 10 323 2.86e-127 366
Msa0830030 AT3G12977.1 54.839 310 92 11 3 305 10 278 4.66e-104 305
Msa0830030 AT1G56010.1 58.712 264 84 10 58 305 2 256 7.97e-94 279
Msa0830030 AT3G12977.2 48.571 280 85 11 30 305 1 225 6.03e-72 222
Msa0830030 AT5G61430.1 51.464 239 94 7 11 232 16 249 4.22e-69 218
Msa0830030 AT3G18400.1 62.987 154 53 2 7 158 1 152 4.34e-68 215
Msa0830030 AT5G07680.2 44.850 301 136 8 11 298 3 286 2.23e-66 211
Msa0830030 AT5G07680.1 44.850 301 136 8 11 298 17 300 2.44e-66 211
Msa0830030 AT5G18270.1 60.870 161 59 3 11 167 21 181 6.59e-65 207
Msa0830030 AT5G18270.2 60.870 161 59 3 11 167 21 181 6.73e-65 207
Msa0830030 AT5G39610.1 51.643 213 91 5 4 208 9 217 6.69e-64 203
Msa0830030 AT4G28530.1 57.143 175 50 4 7 161 6 175 4.57e-63 203
Msa0830030 AT3G04060.1 46.154 247 117 6 11 243 20 264 3.77e-62 201
Msa0830030 AT1G76420.1 60.000 155 56 3 8 158 19 171 5.30e-62 200
Msa0830030 AT5G53950.1 61.635 159 56 3 11 164 17 175 6.04e-61 198
Msa0830030 AT3G29035.1 48.908 229 95 8 11 220 24 249 7.27e-61 196
Msa0830030 AT3G15170.1 48.230 226 92 5 8 220 17 230 2.14e-60 195
Msa0830030 AT2G24430.2 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0830030 AT2G24430.1 59.615 156 55 4 8 158 13 165 5.20e-60 194
Msa0830030 AT1G71930.2 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0830030 AT1G71930.1 52.439 164 66 5 1 158 1 158 4.38e-56 184
Msa0830030 AT1G12260.2 39.262 298 133 11 9 270 5 290 1.26e-55 184
Msa0830030 AT2G18060.3 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0830030 AT2G18060.1 46.465 198 93 5 6 193 4 198 3.80e-55 183
Msa0830030 AT4G36160.1 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0830030 AT4G36160.3 54.248 153 62 3 11 158 10 159 2.94e-54 181
Msa0830030 AT4G36160.2 54.248 153 62 3 11 158 14 163 3.38e-54 181
Msa0830030 AT1G12260.1 50.000 180 76 5 9 178 5 180 3.59e-54 181
Msa0830030 AT5G62380.2 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0830030 AT5G62380.1 56.410 156 58 4 9 158 5 156 4.14e-54 180
Msa0830030 AT1G62700.1 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0830030 AT1G62700.2 49.206 189 80 6 9 191 5 183 3.10e-53 179
Msa0830030 AT3G04070.2 50.292 171 72 3 9 166 8 178 3.12e-53 177
Msa0830030 AT4G10350.1 53.595 153 65 3 11 158 9 160 3.44e-53 177
Msa0830030 AT3G61910.1 49.704 169 68 4 8 159 8 176 2.24e-52 175
Msa0830030 AT4G27410.2 52.258 155 71 2 6 158 9 162 4.56e-52 173
Msa0830030 AT2G46770.1 49.405 168 68 3 8 158 13 180 5.29e-52 175
Msa0830030 AT1G33280.1 51.875 160 68 3 4 158 1 156 5.42e-52 173
Msa0830030 AT1G54330.1 56.098 164 64 4 6 165 1 160 1.82e-51 172
Msa0830030 AT5G66300.1 50.617 162 69 4 11 165 12 169 4.68e-51 170
Msa0830030 AT3G04070.1 45.989 187 72 3 9 166 8 194 9.91e-51 171
Msa0830030 AT3G17730.1 52.532 158 70 3 6 159 1 157 2.06e-50 167
Msa0830030 AT3G15500.1 49.697 165 73 4 6 165 9 168 9.53e-50 168
Msa0830030 AT1G79580.3 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0830030 AT1G79580.5 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0830030 AT1G79580.4 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0830030 AT1G79580.2 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0830030 AT1G79580.1 50.955 157 67 4 8 158 14 166 1.57e-49 169
Msa0830030 AT5G17260.1 50.955 157 73 2 6 158 1 157 2.30e-49 171
Msa0830030 AT1G52890.1 49.697 165 73 4 6 165 9 168 3.15e-49 166
Msa0830030 AT5G61430.2 50.000 190 75 6 58 232 2 186 3.45e-49 165
Msa0830030 AT3G03200.1 48.256 172 84 3 6 173 1 171 5.67e-49 170
Msa0830030 AT1G32770.1 38.934 244 127 8 8 229 13 256 7.97e-49 166
Msa0830030 AT1G65910.1 52.229 157 70 3 6 158 1 156 2.14e-48 171
Msa0830030 AT4G27410.3 47.093 172 71 3 6 158 9 179 1.30e-47 162
Msa0830030 AT4G35580.1 51.497 167 64 5 1 158 1 159 1.31e-47 167
Msa0830030 AT1G01720.1 38.760 258 125 8 10 243 6 254 1.37e-47 161
Msa0830030 AT4G35580.3 51.497 167 64 5 1 158 1 159 1.49e-47 167
Msa0830030 AT1G61110.1 45.405 185 78 6 2 169 7 185 1.51e-47 162
Msa0830030 AT4G35580.2 51.497 167 64 5 1 158 1 159 1.53e-47 167
Msa0830030 AT1G69490.1 47.799 159 72 3 8 158 6 161 1.27e-46 158
Msa0830030 AT5G08790.1 48.408 157 74 3 8 158 4 159 7.46e-46 157
Msa0830030 AT5G63790.1 48.101 158 75 3 7 158 46 202 2.64e-45 156
Msa0830030 AT5G63790.2 48.101 158 75 3 7 158 56 212 2.65e-45 156
Msa0830030 AT3G10490.1 50.602 166 75 4 7 168 23 185 3.47e-45 154
Msa0830030 AT1G77450.1 47.468 158 78 3 5 158 4 160 4.67e-45 154
Msa0830030 AT5G39820.1 44.149 188 81 6 2 165 11 198 5.92e-45 156
Msa0830030 AT3G10480.1 47.027 185 84 5 11 184 27 208 2.86e-44 157
Msa0830030 AT5G46590.1 47.561 164 80 4 6 164 1 163 8.18e-44 152
Msa0830030 AT3G10490.2 51.592 157 72 3 7 159 23 179 9.86e-44 155
Msa0830030 AT1G26870.1 41.584 202 77 5 7 190 12 190 2.14e-43 154
Msa0830030 AT5G13180.1 45.029 171 74 6 1 160 1 162 2.15e-43 149
Msa0830030 AT2G33480.1 49.020 153 72 4 10 160 14 162 3.66e-43 149
Msa0830030 AT2G43000.1 42.703 185 100 3 8 187 16 199 4.12e-43 149
Msa0830030 AT2G33480.2 49.673 153 69 4 10 160 14 160 4.25e-43 149
Msa0830030 AT3G10480.2 47.027 185 83 6 11 184 27 207 4.87e-43 153
Msa0830030 AT5G04410.1 50.327 153 71 4 11 159 9 160 6.92e-43 155
Msa0830030 AT3G15510.1 47.170 159 70 4 15 159 21 179 8.30e-43 151
Msa0830030 AT1G32510.1 47.368 171 79 3 6 165 1 171 9.09e-43 149
Msa0830030 AT3G10500.1 49.673 153 72 4 11 159 9 160 1.02e-42 154
Msa0830030 AT1G33060.1 47.799 159 64 4 11 158 24 174 1.70e-42 155
Msa0830030 AT1G33060.2 47.799 159 64 4 11 158 24 174 1.85e-42 155
Msa0830030 AT4G17980.1 44.149 188 91 5 6 179 1 188 2.55e-42 147
Msa0830030 AT4G17980.2 44.149 188 91 5 6 179 1 188 3.37e-42 147
Msa0830030 AT2G02450.1 48.993 149 70 4 13 158 53 198 1.32e-41 148
Msa0830030 AT2G02450.2 49.660 147 68 4 13 156 53 196 1.37e-41 149
Msa0830030 AT5G46590.2 50.746 134 61 3 6 134 1 134 2.48e-41 145
Msa0830030 AT1G52880.1 46.108 167 71 4 15 165 21 184 1.44e-40 144
Msa0830030 AT3G10480.3 41.284 218 81 6 11 184 27 241 1.83e-40 148
Msa0830030 AT5G24590.2 44.324 185 94 6 9 186 11 193 1.22e-39 144
Msa0830030 AT2G17040.1 45.695 151 71 3 13 158 8 152 1.46e-37 135
Msa0830030 AT3G12910.1 45.062 162 70 5 13 156 23 183 3.51e-37 134
Msa0830030 AT4G28530.2 42.197 173 42 4 7 161 6 138 5.21e-37 134
Msa0830030 AT5G09330.5 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0830030 AT5G09330.2 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0830030 AT5G09330.4 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0830030 AT5G09330.3 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0830030 AT5G09330.1 41.139 158 88 3 6 159 1 157 1.62e-36 137
Msa0830030 AT3G49530.2 43.312 157 83 5 11 162 13 168 1.91e-36 135
Msa0830030 AT2G27300.1 40.000 180 93 6 2 175 5 175 2.05e-36 133
Msa0830030 AT3G49530.1 43.312 157 83 5 11 162 13 168 5.53e-36 135
Msa0830030 AT1G34180.3 44.079 152 76 4 13 158 18 166 5.54e-36 134
Msa0830030 AT1G34180.1 43.791 153 77 4 13 159 18 167 2.06e-35 134
Msa0830030 AT4G10350.2 57.895 95 39 1 64 158 20 113 9.17e-35 128
Msa0830030 AT1G34190.1 48.031 127 62 2 13 135 18 144 1.45e-34 132
Msa0830030 AT5G64060.1 40.506 158 89 3 6 159 1 157 2.17e-34 128
Msa0830030 AT1G34180.4 41.463 164 75 5 13 158 18 178 4.72e-34 129
Msa0830030 AT1G34180.2 41.212 165 76 5 13 159 18 179 1.36e-33 129
Msa0830030 AT5G22290.1 39.375 160 86 4 5 161 15 166 3.29e-33 125
Msa0830030 AT3G44290.2 41.096 146 75 3 13 155 16 153 2.50e-32 120
Msa0830030 AT3G44290.1 41.096 146 75 3 13 155 16 153 1.65e-31 120
Msa0830030 AT1G32870.2 41.143 175 94 4 3 173 2 171 6.20e-31 122
Msa0830030 AT1G32870.1 41.143 175 94 4 3 173 2 171 7.16e-31 121
Msa0830030 AT1G32870.3 41.143 175 94 4 3 173 38 207 1.12e-30 121
Msa0830030 AT5G04395.1 41.216 148 69 3 5 134 22 169 2.10e-29 111
Msa0830030 AT2G33480.3 50.515 97 47 1 64 160 10 105 5.66e-28 108
Msa0830030 AT1G02230.1 31.064 235 143 6 12 237 4 228 2.62e-27 109
Msa0830030 AT3G04420.2 32.474 194 115 5 12 197 4 189 8.72e-25 101
Msa0830030 AT5G22380.1 37.908 153 85 6 14 156 8 160 9.50e-25 100
Msa0830030 AT2G18060.2 43.750 112 55 3 87 193 2 110 2.48e-24 100
Msa0830030 AT3G04420.1 30.000 240 137 8 12 233 4 230 2.50e-24 101
Msa0830030 AT3G44350.2 34.177 158 96 4 10 159 4 161 3.18e-24 99.0
Msa0830030 AT4G01520.1 34.659 176 93 8 10 171 3 170 2.86e-23 97.8
Msa0830030 AT4G01550.1 36.306 157 84 7 14 161 7 156 5.58e-23 99.0
Msa0830030 AT5G64530.2 38.462 130 60 5 11 134 3 118 1.41e-22 92.4
Msa0830030 AT5G64530.1 33.526 173 72 7 11 159 3 156 2.11e-22 92.8
Msa0830030 AT3G10490.4 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0830030 AT3G10490.3 56.410 78 34 0 82 159 2 79 3.21e-22 95.5
Msa0830030 AT3G44350.1 37.879 132 74 4 10 133 4 135 3.62e-22 91.3
Msa0830030 AT4G01540.4 33.526 173 91 8 14 171 7 170 5.09e-22 95.5
Msa0830030 AT4G01540.2 33.526 173 91 8 14 171 7 170 8.34e-22 95.1
Msa0830030 AT4G01540.3 33.526 173 91 8 14 171 7 170 8.38e-22 95.1
Msa0830030 AT4G01540.1 33.526 173 91 8 14 171 7 170 1.04e-21 95.5
Msa0830030 AT2G43000.2 39.167 120 70 1 71 187 2 121 2.75e-21 89.7
Msa0830030 AT1G02250.1 31.925 213 119 10 12 210 4 204 9.17e-20 89.0
Msa0830030 AT1G02220.1 36.719 128 70 4 12 132 4 127 1.16e-19 89.0
Msa0830030 AT5G50820.1 36.923 130 70 4 10 134 16 138 2.56e-18 81.6
Msa0830030 AT1G01010.1 31.447 159 87 6 14 158 6 156 1.75e-16 79.7
Msa0830030 AT5G14000.2 33.588 131 81 3 10 136 14 142 2.37e-15 72.8
Msa0830030 AT5G22290.2 44.595 74 33 2 88 161 2 67 2.24e-14 71.6
Msa0830030 AT5G14000.1 31.788 151 93 5 10 156 14 158 2.42e-14 70.9
Msa0830030 AT3G56530.1 26.582 158 106 4 5 156 46 199 4.06e-14 72.0
Msa0830030 AT3G55210.1 27.168 173 103 5 1 156 1 167 8.16e-14 70.9
Msa0830030 AT3G04430.1 30.201 149 89 4 17 150 6 154 5.56e-13 67.0

Find 111 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTTGCTATTAGTTTA+AGG 0.099186 5_4:-3039790 None:intergenic
TTCATCACTTCCAGCATTAA+TGG 0.146600 5_4:-3040662 Msa0830030:CDS
TTTCCCTAAGTTAAAGAAAT+TGG 0.197910 5_4:-3040231 Msa0830030:three_prime_UTR
ATTAATGATCAAAACCTAAA+AGG 0.212913 5_4:-3040376 Msa0830030:CDS
GAAAGATGGGGCTTTGTAAT+TGG 0.225285 5_4:-3039938 Msa0830030:three_prime_UTR
AGATTGGGTTGGTTTGGTTT+TGG 0.240100 5_4:+3040563 None:intergenic
TCCTAAAATTTCATCTTCTA+AGG 0.243571 5_4:-3041740 Msa0830030:intron
GTGCAACTGCATCAGGTTAT+TGG 0.304123 5_4:-3041912 Msa0830030:CDS
TTGTTGGCTAGAGGTAATTT+TGG 0.309334 5_4:+3040514 None:intergenic
CCACAACAAGAAATTTAAAT+AGG 0.318407 5_4:+3040255 None:intergenic
GTTCCATATTGGTTGTAATA+TGG 0.321690 5_4:+3040536 None:intergenic
CAACCATATTACAACCAATA+TGG 0.321767 5_4:-3040539 Msa0830030:CDS
ATAATTTGCTATTAGTTTAA+GGG 0.322920 5_4:-3039789 None:intergenic
GTAGCCCTGTTGCATATTTA+CGG 0.328714 5_4:+3041944 None:intergenic
ACTTGCATTGTTGTTATTGT+TGG 0.333988 5_4:+3040498 None:intergenic
AATCATCTACCGTTGTAATA+TGG 0.342585 5_4:-3040141 Msa0830030:three_prime_UTR
AACAACAATGCAAGTACATT+TGG 0.349859 5_4:-3040490 Msa0830030:CDS
TGATCCAATTTCTTTAACTT+AGG 0.363392 5_4:+3040227 None:intergenic
CTTCGTAAGGGCACTCTTGT+TGG 0.373702 5_4:-3041862 Msa0830030:CDS
GATAAAGGGTCTAAGCTATA+AGG 0.378533 5_4:+3040460 None:intergenic
GATCCAATTTCTTTAACTTA+GGG 0.379400 5_4:+3040228 None:intergenic
GGTTGTAGATTGGGTTGGTT+TGG 0.395494 5_4:+3040557 None:intergenic
GCTGCGACGGTAGAGGATTC+AGG 0.398422 5_4:-3040185 Msa0830030:three_prime_UTR
TTGTAATATGGTTGTAGATT+GGG 0.402170 5_4:+3040548 None:intergenic
AGAGACCGTAAATATGCAAC+AGG 0.409929 5_4:-3041949 Msa0830030:CDS
TTGTGTATATACAGGAAGAT+TGG 0.410383 5_4:-3040768 Msa0830030:intron
TTGTTAAAATAGATCATTGT+GGG 0.422066 5_4:-3039858 Msa0830030:three_prime_UTR
TGTGTATATACAGGAAGATT+GGG 0.427064 5_4:-3040767 Msa0830030:intron
GTTGTAATATGGTTGTAGAT+TGG 0.429160 5_4:+3040547 None:intergenic
TGTGAGCCATGGGATATTCC+TGG 0.431452 5_4:-3044843 Msa0830030:intron
TTTGAGTCAACTATCAAAGA+TGG 0.431620 5_4:-3040410 Msa0830030:CDS
GCCCCATCTTTCTAATATAC+CGG 0.433813 5_4:+3039949 None:intergenic
TTAATGATCAAAACCTAAAA+GGG 0.436538 5_4:-3040375 Msa0830030:CDS
CCTATTTAAATTTCTTGTTG+TGG 0.438959 5_4:-3040255 Msa0830030:three_prime_UTR
CCCATGGCTCACACTTGTTA+AGG 0.440925 5_4:+3044853 None:intergenic
ACAAATCGTGCAACTGCATC+AGG 0.442887 5_4:-3041919 Msa0830030:CDS
CTTGCTCATATTCATCTGTA+TGG 0.443475 5_4:+3040608 None:intergenic
TTGGGAAAACATGGAGAAGC+AGG 0.444127 5_4:+3040582 None:intergenic
ATGCATGAGTTTCGTATTGA+GGG 0.459420 5_4:-3041775 Msa0830030:CDS
TCAGGTTATTGGAAGGCAAC+AGG 0.459668 5_4:-3041901 Msa0830030:CDS
ATCAAGGAAGGGCACCTAAA+GGG 0.466310 5_4:-3041816 Msa0830030:CDS
GTCCCGGTATATTAGAAAGA+TGG 0.472841 5_4:-3039952 Msa0830030:three_prime_UTR
AGGATCCAATTTCGATGAAA+AGG 0.474863 5_4:-3040104 Msa0830030:three_prime_UTR
AAGACTTTAGTGTTCTATCA+AGG 0.477018 5_4:-3041832 Msa0830030:CDS
TCCCGGTATATTAGAAAGAT+GGG 0.477592 5_4:-3039951 Msa0830030:three_prime_UTR
TATGCATGAGTTTCGTATTG+AGG 0.481434 5_4:-3041776 Msa0830030:CDS
GTCAACATCAATCATGAGAA+AGG 0.483380 5_4:+3044875 None:intergenic
GGAATTAATTATAGAGAAGG+TGG 0.494514 5_4:+3045081 None:intergenic
TGCTACAAAACCTCCAAGCA+TGG 0.497760 5_4:-3040710 Msa0830030:CDS
TGAGAGTTACTTATCTGAAG+TGG 0.505837 5_4:-3040323 Msa0830030:CDS
CATCTGTATGGAATTGAGCT+TGG 0.508894 5_4:+3040620 None:intergenic
ATGTGGTGCTGCGACGGTAG+AGG 0.522239 5_4:-3040192 Msa0830030:three_prime_UTR
AAAGGGTCATCACCAAGCTT+AGG 0.523339 5_4:-3040358 Msa0830030:CDS
TTTCGTATTGAGGGTCCTCA+TGG 0.526305 5_4:-3041766 Msa0830030:CDS
CTTTAGTGTTCTATCAAGGA+AGG 0.528388 5_4:-3041828 Msa0830030:CDS
AACAATGCAAGTACATTTGG+AGG 0.528454 5_4:-3040487 Msa0830030:CDS
GGACAGAGCTATCCTTCGTA+AGG 0.530042 5_4:-3041875 Msa0830030:CDS
GATGGAATTAATTATAGAGA+AGG 0.531426 5_4:+3045078 None:intergenic
ATGTAAGAATCCATTAATGC+TGG 0.533005 5_4:+3040652 None:intergenic
TCATAGCAACTACCCATGCT+TGG 0.533828 5_4:+3040697 None:intergenic
TATCAAGGAAGGGCACCTAA+AGG 0.534747 5_4:-3041817 Msa0830030:CDS
GAACTTCCTTCACCTAAGCT+TGG 0.537127 5_4:+3040346 None:intergenic
CCTTAACAAGTGTGAGCCAT+GGG 0.539747 5_4:-3044853 Msa0830030:CDS
CACACAAGCTCTTCATCTCT+AGG 0.541777 5_4:+3044933 None:intergenic
GATTCAGGTCCGGATTGAAA+AGG 0.545804 5_4:-3040170 Msa0830030:three_prime_UTR
TAGCAACTACCCATGCTTGG+AGG 0.547765 5_4:+3040700 None:intergenic
GAGAGTTACTTATCTGAAGT+GGG 0.548125 5_4:-3040322 Msa0830030:CDS
GAGTAACATAAGCATGGTTG+AGG 0.554745 5_4:-3044985 Msa0830030:CDS
CCCCATCTTTCTAATATACC+GGG 0.556445 5_4:+3039950 None:intergenic
GACGGTAGAGGATTCAGGTC+CGG 0.561922 5_4:-3040180 Msa0830030:three_prime_UTR
CCAATTTAAAAGTGAAACAA+TGG 0.564555 5_4:-3039835 Msa0830030:three_prime_UTR
AATATGGTTGTAGATTGGGT+TGG 0.565125 5_4:+3040552 None:intergenic
TTAGAAATTGTTCCACATGT+GGG 0.570954 5_4:+3040294 None:intergenic
TAGAAATTGTTCCACATGTG+GGG 0.571008 5_4:+3040295 None:intergenic
ATTAGAAATTGTTCCACATG+TGG 0.572291 5_4:+3040293 None:intergenic
ACAAGAAATTTAAATAGGAG+TGG 0.577355 5_4:+3040260 None:intergenic
TATAACATGATTTAAAACAA+TGG 0.578918 5_4:+3040036 None:intergenic
TCTATCCACATGATATGTCC+CGG 0.579561 5_4:-3039968 Msa0830030:three_prime_UTR
TCTAAAATGTGGTGCTGCGA+CGG 0.591737 5_4:-3040198 Msa0830030:three_prime_UTR
ACCTTAACAAGTGTGAGCCA+TGG 0.592225 5_4:-3044854 Msa0830030:CDS
ATGTGGAACAATTTCTAATG+TGG 0.595031 5_4:-3040289 Msa0830030:exon
ATTAATTATAGAGAAGGTGG+AGG 0.598614 5_4:+3045084 None:intergenic
GCTACAAAACCTCCAAGCAT+GGG 0.600781 5_4:-3040709 Msa0830030:CDS
GTTGAGGCAAAGCTACCACC+AGG 0.601916 5_4:-3044969 Msa0830030:CDS
GTGTGATTACTTGATGAAGA+AGG 0.603211 5_4:-3044913 Msa0830030:CDS
CATGTGTGGGAGGGAAAGAG+TGG 0.608228 5_4:-3041987 Msa0830030:CDS
CAGAAGCAGCATGTGTGGGA+GGG 0.608897 5_4:-3041996 Msa0830030:CDS
TTTAGTGTTCTATCAAGGAA+GGG 0.615096 5_4:-3041827 Msa0830030:CDS
TTATTGGAAGGCAACAGGAA+AGG 0.621123 5_4:-3041896 Msa0830030:CDS
TACTAACCAGGAATATCCCA+TGG 0.624451 5_4:+3044837 None:intergenic
ATATGGTGCTGAAGCTGTAG+AGG 0.625759 5_4:-3040124 Msa0830030:three_prime_UTR
TCATCACCAAGCTTAGGTGA+AGG 0.632923 5_4:-3040352 Msa0830030:CDS
AACTGCATCAGGTTATTGGA+AGG 0.632925 5_4:-3041908 Msa0830030:CDS
GACAGAGCTATCCTTCGTAA+GGG 0.632999 5_4:-3041874 Msa0830030:CDS
TTTGTTAAAATAGATCATTG+TGG 0.638660 5_4:-3039859 Msa0830030:three_prime_UTR
TTGTTGTTATTGTTGGCTAG+AGG 0.638919 5_4:+3040505 None:intergenic
TGGGAAAACATGGAGAAGCA+GGG 0.639023 5_4:+3040583 None:intergenic
TGGTGCAGAAGCAGCATGTG+TGG 0.642823 5_4:-3042001 Msa0830030:intron
GCAGAAGCAGCATGTGTGGG+AGG 0.644425 5_4:-3041997 Msa0830030:intron
CTAGGATGAAATCTGAACCC+TGG 0.649291 5_4:+3044951 None:intergenic
CAACAAGAGTGCCCTTACGA+AGG 0.654867 5_4:+3041863 None:intergenic
ATATACCGGGACATATCATG+TGG 0.657333 5_4:+3039963 None:intergenic
GGTAGTTGCTATGATGACAC+AGG 0.669164 5_4:-3040688 Msa0830030:CDS
AAGTGGGTATGCCCCACATG+TGG 0.670092 5_4:-3040306 Msa0830030:CDS
CCCGGTATATTAGAAAGATG+GGG 0.684881 5_4:-3039950 Msa0830030:three_prime_UTR
GATCATCTGCATCTAAAATG+TGG 0.685018 5_4:-3040209 Msa0830030:three_prime_UTR
GGTGCAGAAGCAGCATGTGT+GGG 0.686440 5_4:-3042000 Msa0830030:intron
GGATGAAATCTGAACCCTGG+TGG 0.692300 5_4:+3044954 None:intergenic
GCTTCAGCACCATATTACAA+CGG 0.738936 5_4:+3040132 None:intergenic
GAGACCGTAAATATGCAACA+GGG 0.752701 5_4:-3041948 Msa0830030:CDS
TTGAGGCAAAGCTACCACCA+GGG 0.776299 5_4:-3044968 Msa0830030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATAAATAAATAA+TGG + chr5_4:3041138-3041157 None:intergenic 0.0%
!!! TTATTTTTTATAAATATTTT+TGG - chr5_4:3043291-3043310 Msa0830030:intron 0.0%
!!! TTCTTTATTAAATTTTGATA+AGG - chr5_4:3040336-3040355 Msa0830030:CDS 10.0%
!!! TCTTTATTAAATTTTGATAA+GGG - chr5_4:3040337-3040356 Msa0830030:CDS 10.0%
!! GTAAAAAAATATATATCAAA+TGG + chr5_4:3042649-3042668 None:intergenic 10.0%
!!! AACAAATAGTTTTTTTTAAA+GGG + chr5_4:3042732-3042751 None:intergenic 10.0%
!!! TAACAAATAGTTTTTTTTAA+AGG + chr5_4:3042733-3042752 None:intergenic 10.0%
!! TATAGTTATTAAAATAAACT+AGG - chr5_4:3042808-3042827 Msa0830030:intron 10.0%
!! ATAGTTATTAAAATAAACTA+GGG - chr5_4:3042809-3042828 Msa0830030:intron 10.0%
!!! TTGTGTTTAAAATATTTATA+AGG - chr5_4:3043725-3043744 Msa0830030:intron 10.0%
!!! TTTTTTTTCTAACAAAGATA+TGG + chr5_4:3039866-3039885 None:intergenic 15.0%
!!! AAATTTTCTCATAAAGAAAT+AGG - chr5_4:3040163-3040182 Msa0830030:three_prime_UTR 15.0%
!!! GTTAATTTAATTTCCAATTA+AGG - chr5_4:3040490-3040509 Msa0830030:CDS 15.0%
!! AAGACAGAAAAAAATAAATT+TGG - chr5_4:3040752-3040771 Msa0830030:CDS 15.0%
!! TACATACATAAATATGTAAA+TGG - chr5_4:3041846-3041865 Msa0830030:CDS 15.0%
!! AAGATATAAAATAATACAAG+TGG + chr5_4:3041945-3041964 None:intergenic 15.0%
!!! TGTATTATTTTATATCTTCA+AGG - chr5_4:3041947-3041966 Msa0830030:CDS 15.0%
!! TTTGTCAATTTAAATAGTTA+TGG - chr5_4:3042039-3042058 Msa0830030:intron 15.0%
!!! GAATTTTTTTATATCAACAA+GGG - chr5_4:3042061-3042080 Msa0830030:intron 15.0%
!! ATAATTAAAATACAAACACA+TGG + chr5_4:3042145-3042164 None:intergenic 15.0%
!!! ATTAATGTAATGGAAATATA+TGG - chr5_4:3042851-3042870 Msa0830030:intron 15.0%
!! TATAATTAGTGTAAAGAAAA+TGG + chr5_4:3043346-3043365 None:intergenic 15.0%
!! TTTCTTTACACTAATTATAT+TGG - chr5_4:3043347-3043366 Msa0830030:intron 15.0%
!! AGATTGACAAATAAAAATTA+AGG - chr5_4:3043459-3043478 Msa0830030:intron 15.0%
!! ACCATATATGTTAAATTAAA+TGG - chr5_4:3043869-3043888 Msa0830030:intron 15.0%
!!! ACCATTTAATTTAACATATA+TGG + chr5_4:3043873-3043892 None:intergenic 15.0%
!!! TATAACATGATTTAAAACAA+TGG + chr5_4:3044839-3044858 None:intergenic 15.0%
!!! AAGTGAGAAATTTTTTAAGA+TGG + chr5_4:3039815-3039834 None:intergenic 20.0%
!!! ATTTAATTTCCAATTAAGGT+AGG - chr5_4:3040494-3040513 Msa0830030:CDS 20.0%
!! ATACTTAGGATAAAATACAT+TGG - chr5_4:3041079-3041098 Msa0830030:intron 20.0%
!! ACTATCAAAGTCTTTATAAT+AGG + chr5_4:3041364-3041383 None:intergenic 20.0%
!! CTTTCTAAACACAAATATAA+TGG + chr5_4:3041655-3041674 None:intergenic 20.0%
!!! TTTAATTTGTATGCACAAAT+AGG + chr5_4:3041909-3041928 None:intergenic 20.0%
!!! GGAATTTTTTTATATCAACA+AGG - chr5_4:3042060-3042079 Msa0830030:intron 20.0%
!! ATAAAATCCAAAACTAGTTA+TGG + chr5_4:3042204-3042223 None:intergenic 20.0%
!! AAATGAAAAAGAAACTGTTA+GGG - chr5_4:3042241-3042260 Msa0830030:intron 20.0%
!!! AACAGTAATAATTTTGTTTG+TGG + chr5_4:3042393-3042412 None:intergenic 20.0%
!! TGTTCTAATAATTAAGACAA+AGG - chr5_4:3042409-3042428 Msa0830030:intron 20.0%
!! AGTTATTATAGATCAATGAA+AGG + chr5_4:3042556-3042575 None:intergenic 20.0%
!! ATATATATCAAATGGAACAT+GGG + chr5_4:3042641-3042660 None:intergenic 20.0%
!! AATATATATCAAATGGAACA+TGG + chr5_4:3042642-3042661 None:intergenic 20.0%
!! TCTTAGTCTAATTAATGTAA+TGG - chr5_4:3042841-3042860 Msa0830030:intron 20.0%
!!! TATTTCTTTCTCCTTTAAAA+AGG + chr5_4:3043240-3043259 None:intergenic 20.0%
!!! TCATTTTGCAACATATTTTT+TGG - chr5_4:3043389-3043408 Msa0830030:intron 20.0%
!! ATGTGACTTCAAAAATATAT+TGG - chr5_4:3043553-3043572 Msa0830030:intron 20.0%
!! TGTGACTTCAAAAATATATT+GGG - chr5_4:3043554-3043573 Msa0830030:intron 20.0%
!! GTTTAATAAAAAATTCAGAG+AGG + chr5_4:3043598-3043617 None:intergenic 20.0%
!! TTATCCAATCAAATATCAAA+AGG + chr5_4:3043683-3043702 None:intergenic 20.0%
!! TTCGTTAATTGTTAACTATT+CGG + chr5_4:3043970-3043989 None:intergenic 20.0%
!!! TTAGGTTTTGATCATTAATA+GGG + chr5_4:3044495-3044514 None:intergenic 20.0%
!!! TTTAGGTTTTGATCATTAAT+AGG + chr5_4:3044496-3044515 None:intergenic 20.0%
!! ATTAATGATCAAAACCTAAA+AGG - chr5_4:3044496-3044515 Msa0830030:intron 20.0%
!! TTAATGATCAAAACCTAAAA+GGG - chr5_4:3044497-3044516 Msa0830030:intron 20.0%
!!! AGTATCTATATATTTTGTCA+TGG - chr5_4:3044858-3044877 Msa0830030:CDS 20.0%
!!! AATTTGTAGTTCATTTTAGT+TGG - chr5_4:3044965-3044984 Msa0830030:CDS 20.0%
!! TTTGTTAAAATAGATCATTG+TGG - chr5_4:3045013-3045032 Msa0830030:five_prime_UTR 20.0%
!! TTGTTAAAATAGATCATTGT+GGG - chr5_4:3045014-3045033 Msa0830030:five_prime_UTR 20.0%
! GATGGAATTAATTATAGAGA+AGG + chr5_4:3039797-3039816 None:intergenic 25.0%
! AAAAATGAGTAACATAAGCA+TGG - chr5_4:3039881-3039900 Msa0830030:three_prime_UTR 25.0%
! AACATGTCATGTGTATATAA+AGG + chr5_4:3040107-3040126 None:intergenic 25.0%
! ATAGCAAACTGAAAAATTGA+TGG + chr5_4:3040233-3040252 None:intergenic 25.0%
! ACTCATTTGTACTTTATCAA+TGG + chr5_4:3040258-3040277 None:intergenic 25.0%
! AGTATATATCAGTTTCCATT+AGG + chr5_4:3040664-3040683 None:intergenic 25.0%
! GACAAAAATCATCTCAAATT+TGG + chr5_4:3040781-3040800 None:intergenic 25.0%
!!! TCGATCTAATTTTTTCACAA+AGG + chr5_4:3040869-3040888 None:intergenic 25.0%
!!! AGCCTTTGTATTTTAATGTA+TGG - chr5_4:3040941-3040960 Msa0830030:intron 25.0%
! TGCCATACATTAAAATACAA+AGG + chr5_4:3040946-3040965 None:intergenic 25.0%
!!! TTGTATTTTAATGTATGGCA+TGG - chr5_4:3040946-3040965 Msa0830030:intron 25.0%
! TATTATTAATTCCTAATCCC+AGG - chr5_4:3040970-3040989 Msa0830030:intron 25.0%
! TATCTCTATTAAATATGCCT+GGG + chr5_4:3040990-3041009 None:intergenic 25.0%
! CATATTTAATAGAGATAGGT+AGG - chr5_4:3040993-3041012 Msa0830030:intron 25.0%
! TGCATACAAATTAAATCCAA+TGG - chr5_4:3041914-3041933 Msa0830030:CDS 25.0%
!!! AAGAGTGAAATTTTTTTTGC+TGG + chr5_4:3041973-3041992 None:intergenic 25.0%
!!! TTTTTTAGGCTTGATATGAT+AGG - chr5_4:3042092-3042111 Msa0830030:intron 25.0%
!! TACTGAAGCTTTTATAAAGT+AGG - chr5_4:3042119-3042138 Msa0830030:intron 25.0%
!!! GTTTCTTTTTCATTTCATGA+TGG + chr5_4:3042236-3042255 None:intergenic 25.0%
! GAAATGAAAAAGAAACTGTT+AGG - chr5_4:3042240-3042259 Msa0830030:intron 25.0%
! AATGAAAAAGAAACTGTTAG+GGG - chr5_4:3042242-3042261 Msa0830030:intron 25.0%
! TCAGGATAATATTGTTAATG+AGG - chr5_4:3042473-3042492 Msa0830030:intron 25.0%
! ATATTGTTAATGAGGACAAT+TGG - chr5_4:3042481-3042500 Msa0830030:intron 25.0%
! ATGTGAATTTAAGTAAGATG+AGG + chr5_4:3042588-3042607 None:intergenic 25.0%
!!! TAGAAGATGAAATTTTAGGA+GGG + chr5_4:3043132-3043151 None:intergenic 25.0%
!! TTAGAAGATGAAATTTTAGG+AGG + chr5_4:3043133-3043152 None:intergenic 25.0%
! TCCTAAAATTTCATCTTCTA+AGG - chr5_4:3043132-3043151 Msa0830030:intron 25.0%
!! ACCTTAGAAGATGAAATTTT+AGG + chr5_4:3043136-3043155 None:intergenic 25.0%
!! TTTTGGACAAAAATGACTAT+AGG - chr5_4:3043308-3043327 Msa0830030:intron 25.0%
! TTTGGACAAAAATGACTATA+GGG - chr5_4:3043309-3043328 Msa0830030:intron 25.0%
!!! ATTAAGGACTTTTGACTTTT+TGG - chr5_4:3043475-3043494 Msa0830030:intron 25.0%
!!! CTGTTATTTGTTTTGTAGAT+AGG + chr5_4:3043653-3043672 None:intergenic 25.0%
!! AAGACCTTTTGATATTTGAT+TGG - chr5_4:3043676-3043695 Msa0830030:intron 25.0%
! TGATATTTGATTGGATAACT+CGG - chr5_4:3043685-3043704 Msa0830030:intron 25.0%
! GTTATTCAATCAAAATCGAT+CGG - chr5_4:3043764-3043783 Msa0830030:intron 25.0%
! GTTAAATTGGTTGGAAAATT+CGG + chr5_4:3043902-3043921 None:intergenic 25.0%
! GTTTGAACTTAGAGTTAAAT+TGG + chr5_4:3043915-3043934 None:intergenic 25.0%
! ATTTAACTCTAAGTTCAAAC+CGG - chr5_4:3043915-3043934 Msa0830030:intron 25.0%
! TTAATTGTTAACTATTCGGA+GGG + chr5_4:3043966-3043985 None:intergenic 25.0%
! TTGTAATATGGTTGTAGATT+GGG + chr5_4:3044327-3044346 None:intergenic 25.0%
!! CTTTTCTATCACATGATAAA+GGG + chr5_4:3044429-3044448 None:intergenic 25.0%
!! ACTTTTCTATCACATGATAA+AGG + chr5_4:3044430-3044449 None:intergenic 25.0%
! ACAAGAAATTTAAATAGGAG+TGG + chr5_4:3044615-3044634 None:intergenic 25.0%
! CCACAACAAGAAATTTAAAT+AGG + chr5_4:3044620-3044639 None:intergenic 25.0%
! CCTATTTAAATTTCTTGTTG+TGG - chr5_4:3044617-3044636 Msa0830030:intron 25.0%
! TTTCCCTAAGTTAAAGAAAT+TGG - chr5_4:3044641-3044660 Msa0830030:intron 25.0%
!! GATCCAATTTCTTTAACTTA+GGG + chr5_4:3044647-3044666 None:intergenic 25.0%
!! TGATCCAATTTCTTTAACTT+AGG + chr5_4:3044648-3044667 None:intergenic 25.0%
!!! CCATTGTTTCACTTTTAAAT+TGG + chr5_4:3045040-3045059 None:intergenic 25.0%
! CCAATTTAAAAGTGAAACAA+TGG - chr5_4:3045037-3045056 Msa0830030:five_prime_UTR 25.0%
GGAATTAATTATAGAGAAGG+TGG + chr5_4:3039794-3039813 None:intergenic 30.0%
! AAGGAATGCATGATAATGAA+GGG + chr5_4:3040088-3040107 None:intergenic 30.0%
! AAAGGAATGCATGATAATGA+AGG + chr5_4:3040089-3040108 None:intergenic 30.0%
!! ATTTTGATAAGGGTAGATTG+AGG - chr5_4:3040347-3040366 Msa0830030:CDS 30.0%
GTGCTTTGATATGAAAATCA+TGG - chr5_4:3040424-3040443 Msa0830030:CDS 30.0%
AGATTATAGCCTACCTTAAT+TGG + chr5_4:3040506-3040525 None:intergenic 30.0%
GTTCAAGGATCAAAAGATTA+TGG + chr5_4:3040586-3040605 None:intergenic 30.0%
! ATCTTTTGATCCTTGAACAA+TGG - chr5_4:3040588-3040607 Msa0830030:CDS 30.0%
TGATAAATGAAAGAGCCTAA+TGG - chr5_4:3040646-3040665 Msa0830030:CDS 30.0%
TAGCTACGAAAATTTAGAGA+CGG + chr5_4:3040809-3040828 None:intergenic 30.0%
!!! TCCAATCTGCATTTTTTATG+TGG - chr5_4:3040902-3040921 Msa0830030:intron 30.0%
!!! CCAATCTGCATTTTTTATGT+GGG - chr5_4:3040903-3040922 Msa0830030:intron 30.0%
TATTAAATATGCCTGGGATT+AGG + chr5_4:3040984-3041003 None:intergenic 30.0%
CTATCTCTATTAAATATGCC+TGG + chr5_4:3040991-3041010 None:intergenic 30.0%
CAGGCATATTTAATAGAGAT+AGG - chr5_4:3040989-3041008 Msa0830030:intron 30.0%
AGTTAATCACGTTTATGTGT+AGG + chr5_4:3041432-3041451 None:intergenic 30.0%
!!! TTTCGAGTTTTACATATTGC+TGG - chr5_4:3041480-3041499 Msa0830030:intron 30.0%
! CTTTTGACATGAAAGTAAGA+TGG + chr5_4:3041524-3041543 None:intergenic 30.0%
!! AATACAAGTGGATTAACCAT+TGG + chr5_4:3041933-3041952 None:intergenic 30.0%
!!! CAAGGGCAAAATAGTTTTTT+AGG - chr5_4:3042078-3042097 Msa0830030:intron 30.0%
TGTTGAGATGTCTTCTAATT+AGG + chr5_4:3042271-3042290 None:intergenic 30.0%
ATGGAAGAGGATATGTATAT+TGG - chr5_4:3042295-3042314 Msa0830030:intron 30.0%
TGGAAGAGGATATGTATATT+GGG - chr5_4:3042296-3042315 Msa0830030:intron 30.0%
!! ATTTTGTTTGTGGCAAAACA+GGG + chr5_4:3042383-3042402 None:intergenic 30.0%
!! AATTTTGTTTGTGGCAAAAC+AGG + chr5_4:3042384-3042403 None:intergenic 30.0%
GTCATGAGCATTTAATCAAA+AGG - chr5_4:3042439-3042458 Msa0830030:intron 30.0%
CAAAAGGATTAAGTAAACTC+AGG - chr5_4:3042455-3042474 Msa0830030:intron 30.0%
AAGACTTTAGTGTTCTATCA+AGG - chr5_4:3043040-3043059 Msa0830030:intron 30.0%
TTTAGTGTTCTATCAAGGAA+GGG - chr5_4:3043045-3043064 Msa0830030:intron 30.0%
TAAAGGGAGAAAAACTGAAT+GGG - chr5_4:3043072-3043091 Msa0830030:intron 30.0%
! GCTTGATCTAACCTTTTTAA+AGG - chr5_4:3043226-3043245 Msa0830030:intron 30.0%
AAAGGAGAAAGAAATAAGTC+AGG - chr5_4:3043244-3043263 Msa0830030:intron 30.0%
! ATGTGAGACAAATTTGGTTT+CGG + chr5_4:3043519-3043538 None:intergenic 30.0%
! GTTTTGTAGATAGGAGAATT+TGG + chr5_4:3043644-3043663 None:intergenic 30.0%
GAACTTAGAGTTAAATTGGT+TGG + chr5_4:3043911-3043930 None:intergenic 30.0%
GTTAATTGTTAACTATTCGG+AGG + chr5_4:3043967-3043986 None:intergenic 30.0%
CAAAACAAGTGTCATAGTTT+AGG + chr5_4:3044052-3044071 None:intergenic 30.0%
GCATAATCTTGTGTATATAC+AGG - chr5_4:3044096-3044115 Msa0830030:intron 30.0%
TTGTGTATATACAGGAAGAT+TGG - chr5_4:3044104-3044123 Msa0830030:intron 30.0%
TGTGTATATACAGGAAGATT+GGG - chr5_4:3044105-3044124 Msa0830030:intron 30.0%
ATGTAAGAATCCATTAATGC+TGG + chr5_4:3044223-3044242 None:intergenic 30.0%
GTTGTAATATGGTTGTAGAT+TGG + chr5_4:3044328-3044347 None:intergenic 30.0%
CAACCATATTACAACCAATA+TGG - chr5_4:3044333-3044352 Msa0830030:intron 30.0%
! GTTCCATATTGGTTGTAATA+TGG + chr5_4:3044339-3044358 None:intergenic 30.0%
!!! AGGTAATTTTGGTTCCATAT+TGG + chr5_4:3044350-3044369 None:intergenic 30.0%
! ACTTGCATTGTTGTTATTGT+TGG + chr5_4:3044377-3044396 None:intergenic 30.0%
AACAACAATGCAAGTACATT+TGG - chr5_4:3044382-3044401 Msa0830030:intron 30.0%
TTTGAGTCAACTATCAAAGA+TGG - chr5_4:3044462-3044481 Msa0830030:intron 30.0%
TTAGAAATTGTTCCACATGT+GGG + chr5_4:3044581-3044600 None:intergenic 30.0%
ATTAGAAATTGTTCCACATG+TGG + chr5_4:3044582-3044601 None:intergenic 30.0%
ATGTGGAACAATTTCTAATG+TGG - chr5_4:3044583-3044602 Msa0830030:intron 30.0%
! ATTCAGATTCCTTTTCAATC+CGG + chr5_4:3044714-3044733 None:intergenic 30.0%
AATCATCTACCGTTGTAATA+TGG - chr5_4:3044731-3044750 Msa0830030:intron 30.0%
! AGACAAAAATAGGAGTACAA+GGG - chr5_4:3044798-3044817 Msa0830030:intron 30.0%
!!! TTGTAGTTCATTTTAGTTGG+TGG - chr5_4:3044968-3044987 Msa0830030:CDS 30.0%
GTGTGATTACTTGATGAAGA+AGG - chr5_4:3039959-3039978 Msa0830030:three_prime_UTR 35.0%
GTCAACATCAATCATGAGAA+AGG + chr5_4:3040000-3040019 None:intergenic 35.0%
! TCAGAGCATTAATACTAACC+AGG + chr5_4:3040050-3040069 None:intergenic 35.0%
ATAGCTGTAACCATTGTTCA+AGG + chr5_4:3040601-3040620 None:intergenic 35.0%
TTGAACAATGGTTACAGCTA+TGG - chr5_4:3040600-3040619 Msa0830030:CDS 35.0%
CCCACATAAAAAATGCAGAT+TGG + chr5_4:3040906-3040925 None:intergenic 35.0%
TAATAGAGATAGGTAGGTAC+AGG - chr5_4:3040999-3041018 Msa0830030:intron 35.0%
AGATGGACATAGACTTAGTT+TGG + chr5_4:3041507-3041526 None:intergenic 35.0%
AGAGAGACTTATCATTAGGA+GGG - chr5_4:3041562-3041581 Msa0830030:intron 35.0%
! GTTTTATATGCATGATCGTG+AGG - chr5_4:3041607-3041626 Msa0830030:intron 35.0%
!! GAAATCGCCATAACTAGTTT+TGG - chr5_4:3042194-3042213 Msa0830030:intron 35.0%
GAAGACATCTCAACAATTGA+TGG - chr5_4:3042276-3042295 Msa0830030:intron 35.0%
ATCTCAACAATTGATGGAAG+AGG - chr5_4:3042282-3042301 Msa0830030:intron 35.0%
CTTTAGTGTTCTATCAAGGA+AGG - chr5_4:3043044-3043063 Msa0830030:intron 35.0%
! CATTCAGTTTTTCTCCCTTT+AGG + chr5_4:3043073-3043092 None:intergenic 35.0%
CTAAAGGGAGAAAAACTGAA+TGG - chr5_4:3043071-3043090 Msa0830030:intron 35.0%
TATGCATGAGTTTCGTATTG+AGG - chr5_4:3043096-3043115 Msa0830030:intron 35.0%
ATGCATGAGTTTCGTATTGA+GGG - chr5_4:3043097-3043116 Msa0830030:intron 35.0%
! AAAAATGACTATAGGGCACT+TGG - chr5_4:3043316-3043335 Msa0830030:intron 35.0%
!! ATAGCCTTGTATTACTTTCC+TGG - chr5_4:3043414-3043433 Msa0830030:intron 35.0%
CATACCAGGAAAGTAATACA+AGG + chr5_4:3043421-3043440 None:intergenic 35.0%
TTACTTTCCTGGTATGAATG+AGG - chr5_4:3043425-3043444 Msa0830030:intron 35.0%
TACTTTCCTGGTATGAATGA+GGG - chr5_4:3043426-3043445 Msa0830030:intron 35.0%
GAAACCAAATTTGTCTCACA+TGG - chr5_4:3043518-3043537 Msa0830030:intron 35.0%
ATAGCCATGTGAGACAAATT+TGG + chr5_4:3043525-3043544 None:intergenic 35.0%
AATTTGTCTCACATGGCTAT+TGG - chr5_4:3043525-3043544 Msa0830030:intron 35.0%
AATTCAGAGAGGATCTACTT+AGG + chr5_4:3043587-3043606 None:intergenic 35.0%
! TTGACTCGATGACCTTAATA+TGG - chr5_4:3043797-3043816 Msa0830030:intron 35.0%
TGACTCGATGACCTTAATAT+GGG - chr5_4:3043798-3043817 Msa0830030:intron 35.0%
TTCATCACTTCCAGCATTAA+TGG - chr5_4:3044210-3044229 Msa0830030:intron 35.0%
CTTGCTCATATTCATCTGTA+TGG + chr5_4:3044267-3044286 None:intergenic 35.0%
AATATGGTTGTAGATTGGGT+TGG + chr5_4:3044323-3044342 None:intergenic 35.0%
!! TTGTTGGCTAGAGGTAATTT+TGG + chr5_4:3044361-3044380 None:intergenic 35.0%
! TTGTTGTTATTGTTGGCTAG+AGG + chr5_4:3044370-3044389 None:intergenic 35.0%
AACAATGCAAGTACATTTGG+AGG - chr5_4:3044385-3044404 Msa0830030:intron 35.0%
GATAAAGGGTCTAAGCTATA+AGG + chr5_4:3044415-3044434 None:intergenic 35.0%
TGAGAGTTACTTATCTGAAG+TGG - chr5_4:3044549-3044568 Msa0830030:intron 35.0%
! GAGAGTTACTTATCTGAAGT+GGG - chr5_4:3044550-3044569 Msa0830030:intron 35.0%
TAGAAATTGTTCCACATGTG+GGG + chr5_4:3044580-3044599 None:intergenic 35.0%
! GATCATCTGCATCTAAAATG+TGG - chr5_4:3044663-3044682 Msa0830030:intron 35.0%
AGGATCCAATTTCGATGAAA+AGG - chr5_4:3044768-3044787 Msa0830030:intron 35.0%
! CAGACAAAAATAGGAGTACA+AGG - chr5_4:3044797-3044816 Msa0830030:intron 35.0%
TCCCGGTATATTAGAAAGAT+GGG - chr5_4:3044921-3044940 Msa0830030:CDS 35.0%
!!! AGTTCATTTTAGTTGGTGGA+TGG - chr5_4:3044972-3044991 Msa0830030:CDS 35.0%
GAGTAACATAAGCATGGTTG+AGG - chr5_4:3039887-3039906 Msa0830030:three_prime_UTR 40.0%
TACTAACCAGGAATATCCCA+TGG + chr5_4:3040038-3040057 None:intergenic 40.0%
TTGTACATGCAGGGGATTAT+AGG + chr5_4:3040393-3040412 None:intergenic 40.0%
ACTGCACAATTGTACATGCA+GGG + chr5_4:3040402-3040421 None:intergenic 40.0%
ATATACACATACACGCACCA+TGG - chr5_4:3041191-3041210 Msa0830030:intron 40.0%
GCTGAGAGAGACTTATCATT+AGG - chr5_4:3041558-3041577 Msa0830030:intron 40.0%
GAGAGAGACTTATCATTAGG+AGG - chr5_4:3041561-3041580 Msa0830030:intron 40.0%
GAAAAAGAAACTGTTAGGGG+TGG - chr5_4:3042245-3042264 Msa0830030:intron 40.0%
AGAGACCGTAAATATGCAAC+AGG - chr5_4:3042923-3042942 Msa0830030:intron 40.0%
GAGACCGTAAATATGCAACA+GGG - chr5_4:3042924-3042943 Msa0830030:intron 40.0%
GTAGCCCTGTTGCATATTTA+CGG + chr5_4:3042931-3042950 None:intergenic 40.0%
AACTGCATCAGGTTATTGGA+AGG - chr5_4:3042964-3042983 Msa0830030:intron 40.0%
TTATTGGAAGGCAACAGGAA+AGG - chr5_4:3042976-3042995 Msa0830030:intron 40.0%
GACTCGATGACCTTAATATG+GGG - chr5_4:3043799-3043818 Msa0830030:intron 40.0%
TAACTCTAAGTTCAAACCGG+TGG - chr5_4:3043918-3043937 Msa0830030:intron 40.0%
ATTCGGAGGGATCTAAAGAA+GGG + chr5_4:3043953-3043972 None:intergenic 40.0%
TATTCGGAGGGATCTAAAGA+AGG + chr5_4:3043954-3043973 None:intergenic 40.0%
!! AGGAAGATTGGGTTTTGTGT+AGG - chr5_4:3044116-3044135 Msa0830030:intron 40.0%
!! GGAAGATTGGGTTTTGTGTA+GGG - chr5_4:3044117-3044136 Msa0830030:intron 40.0%
CATCTGTATGGAATTGAGCT+TGG + chr5_4:3044255-3044274 None:intergenic 40.0%
!!! GGTTTGGTTTTGGGAAAACA+TGG + chr5_4:3044302-3044321 None:intergenic 40.0%
!!! GATTGGGTTGGTTTGGTTTT+GGG + chr5_4:3044311-3044330 None:intergenic 40.0%
!!! AGATTGGGTTGGTTTGGTTT+TGG + chr5_4:3044312-3044331 None:intergenic 40.0%
GCTTCAGCACCATATTACAA+CGG + chr5_4:3044743-3044762 None:intergenic 40.0%
! GTTCGCCTTTTCATCGAAAT+TGG + chr5_4:3044776-3044795 None:intergenic 40.0%
AGGCGAACACAGACAAAAAT+AGG - chr5_4:3044788-3044807 Msa0830030:intron 40.0%
TCTATCCACATGATATGTCC+CGG - chr5_4:3044904-3044923 Msa0830030:CDS 40.0%
ATATACCGGGACATATCATG+TGG + chr5_4:3044912-3044931 None:intergenic 40.0%
GTCCCGGTATATTAGAAAGA+TGG - chr5_4:3044920-3044939 Msa0830030:CDS 40.0%
CCCCATCTTTCTAATATACC+GGG + chr5_4:3044925-3044944 None:intergenic 40.0%
CCCGGTATATTAGAAAGATG+GGG - chr5_4:3044922-3044941 Msa0830030:CDS 40.0%
GCCCCATCTTTCTAATATAC+CGG + chr5_4:3044926-3044945 None:intergenic 40.0%
! GAAAGATGGGGCTTTGTAAT+TGG - chr5_4:3044934-3044953 Msa0830030:CDS 40.0%
CTAGGATGAAATCTGAACCC+TGG + chr5_4:3039924-3039943 None:intergenic 45.0%
CACACAAGCTCTTCATCTCT+AGG + chr5_4:3039942-3039961 None:intergenic 45.0%
ACCTTAACAAGTGTGAGCCA+TGG - chr5_4:3040018-3040037 Msa0830030:three_prime_UTR 45.0%
CCTTAACAAGTGTGAGCCAT+GGG - chr5_4:3040019-3040038 Msa0830030:three_prime_UTR 45.0%
CTGCACAATTGTACATGCAG+GGG + chr5_4:3040401-3040420 None:intergenic 45.0%
CACTGCACAATTGTACATGC+AGG + chr5_4:3040403-3040422 None:intergenic 45.0%
TAGAGATAGGTAGGTACAGG+TGG - chr5_4:3041002-3041021 Msa0830030:intron 45.0%
ACATACACGCACCATGGAAA+GGG - chr5_4:3041197-3041216 Msa0830030:intron 45.0%
ACTGTCTACATCCCTTTCCA+TGG + chr5_4:3041211-3041230 None:intergenic 45.0%
GAAAGGGATGTAGACAGTTG+AGG - chr5_4:3041213-3041232 Msa0830030:intron 45.0%
ACAAATCGTGCAACTGCATC+AGG - chr5_4:3042953-3042972 Msa0830030:intron 45.0%
GTGCAACTGCATCAGGTTAT+TGG - chr5_4:3042960-3042979 Msa0830030:intron 45.0%
TCAGGTTATTGGAAGGCAAC+AGG - chr5_4:3042971-3042990 Msa0830030:intron 45.0%
GACAGAGCTATCCTTCGTAA+GGG - chr5_4:3042998-3043017 Msa0830030:intron 45.0%
!! TATCAAGGAAGGGCACCTAA+AGG - chr5_4:3043055-3043074 Msa0830030:intron 45.0%
!! ATCAAGGAAGGGCACCTAAA+GGG - chr5_4:3043056-3043075 Msa0830030:intron 45.0%
TTTCGTATTGAGGGTCCTCA+TGG - chr5_4:3043106-3043125 Msa0830030:intron 45.0%
!! GAAATTTTAGGAGGGCCATG+AGG + chr5_4:3043124-3043143 None:intergenic 45.0%
TTTCCTGGTATGAATGAGGG+AGG - chr5_4:3043429-3043448 Msa0830030:intron 45.0%
TCGATGACCTTAATATGGGG+TGG - chr5_4:3043802-3043821 Msa0830030:intron 45.0%
ATGACCTTAATATGGGGTGG+TGG - chr5_4:3043805-3043824 Msa0830030:intron 45.0%
TGACCTTAATATGGGGTGGT+GGG - chr5_4:3043806-3043825 Msa0830030:intron 45.0%
AATCCCACCACCCCATATTA+AGG + chr5_4:3043812-3043831 None:intergenic 45.0%
AGAAGGGACAAATGTTCCAC+CGG + chr5_4:3043937-3043956 None:intergenic 45.0%
TGCTACAAAACCTCCAAGCA+TGG - chr5_4:3044162-3044181 Msa0830030:intron 45.0%
GCTACAAAACCTCCAAGCAT+GGG - chr5_4:3044163-3044182 Msa0830030:intron 45.0%
TCATAGCAACTACCCATGCT+TGG + chr5_4:3044178-3044197 None:intergenic 45.0%
GGTAGTTGCTATGATGACAC+AGG - chr5_4:3044184-3044203 Msa0830030:intron 45.0%
TGGGAAAACATGGAGAAGCA+GGG + chr5_4:3044292-3044311 None:intergenic 45.0%
TTGGGAAAACATGGAGAAGC+AGG + chr5_4:3044293-3044312 None:intergenic 45.0%
!! GGTTGTAGATTGGGTTGGTT+TGG + chr5_4:3044318-3044337 None:intergenic 45.0%
!!! AGCTTGGTGATGACCCTTTT+AGG + chr5_4:3044513-3044532 None:intergenic 45.0%
AAAGGGTCATCACCAAGCTT+AGG - chr5_4:3044514-3044533 Msa0830030:intron 45.0%
TCATCACCAAGCTTAGGTGA+AGG - chr5_4:3044520-3044539 Msa0830030:intron 45.0%
GAACTTCCTTCACCTAAGCT+TGG + chr5_4:3044529-3044548 None:intergenic 45.0%
!! TCTAAAATGTGGTGCTGCGA+CGG - chr5_4:3044674-3044693 Msa0830030:intron 45.0%
GATTCAGGTCCGGATTGAAA+AGG - chr5_4:3044702-3044721 Msa0830030:intron 45.0%
! ATATGGTGCTGAAGCTGTAG+AGG - chr5_4:3044748-3044767 Msa0830030:intron 45.0%
!! TATAACAAATAAAAAAATAT+TGG - chr5_4:3041041-3041060 Msa0830030:intron 5.0%
!! AAATAATATTATTTATACTT+AGG - chr5_4:3041065-3041084 Msa0830030:intron 5.0%
!!! AAAATATTTTTGATTAATTA+AGG + chr5_4:3041310-3041329 None:intergenic 5.0%
!!! TAATCAAAAATATTTTTATT+TGG - chr5_4:3041314-3041333 Msa0830030:intron 5.0%
!! ATAAAAAAATATTATATCAT+CGG + chr5_4:3041772-3041791 None:intergenic 5.0%
TTGAGGCAAAGCTACCACCA+GGG - chr5_4:3039904-3039923 Msa0830030:three_prime_UTR 50.0%
GGATGAAATCTGAACCCTGG+TGG + chr5_4:3039921-3039940 None:intergenic 50.0%
! CCCATGGCTCACACTTGTTA+AGG + chr5_4:3040022-3040041 None:intergenic 50.0%
TGTGAGCCATGGGATATTCC+TGG - chr5_4:3040029-3040048 Msa0830030:three_prime_UTR 50.0%
CACATACACGCACCATGGAA+AGG - chr5_4:3041196-3041215 Msa0830030:intron 50.0%
GGACAGAGCTATCCTTCGTA+AGG - chr5_4:3042997-3043016 Msa0830030:intron 50.0%
!! CAACAAGAGTGCCCTTACGA+AGG + chr5_4:3043012-3043031 None:intergenic 50.0%
!! CTTCGTAAGGGCACTCTTGT+TGG - chr5_4:3043010-3043029 Msa0830030:intron 50.0%
TTGCCTCCCTCATTCATACC+AGG + chr5_4:3043435-3043454 None:intergenic 50.0%
TAGCAACTACCCATGCTTGG+AGG + chr5_4:3044175-3044194 None:intergenic 50.0%
GTTGAGGCAAAGCTACCACC+AGG - chr5_4:3039903-3039922 Msa0830030:three_prime_UTR 55.0%
TGGTGCAGAAGCAGCATGTG+TGG - chr5_4:3042871-3042890 Msa0830030:intron 55.0%
GGTGCAGAAGCAGCATGTGT+GGG - chr5_4:3042872-3042891 Msa0830030:intron 55.0%
CAGAAGCAGCATGTGTGGGA+GGG - chr5_4:3042876-3042895 Msa0830030:intron 55.0%
CATGTGTGGGAGGGAAAGAG+TGG - chr5_4:3042885-3042904 Msa0830030:intron 55.0%
AAGTGGGTATGCCCCACATG+TGG - chr5_4:3044566-3044585 Msa0830030:intron 55.0%
GACGGTAGAGGATTCAGGTC+CGG - chr5_4:3044692-3044711 Msa0830030:intron 55.0%
GCAGAAGCAGCATGTGTGGG+AGG - chr5_4:3042875-3042894 Msa0830030:intron 60.0%
!! ATGTGGTGCTGCGACGGTAG+AGG - chr5_4:3044680-3044699 Msa0830030:intron 60.0%
GCTGCGACGGTAGAGGATTC+AGG - chr5_4:3044687-3044706 Msa0830030:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 3039791 3045103 3039791 ID=Msa0830030;Name=Msa0830030
chr5_4 mRNA 3039791 3045103 3039791 ID=Msa0830030-mRNA-1;Parent=Msa0830030;Name=Msa0830030-mRNA-1;_AED=0.02;_eAED=0.02;_QI=94|1|1|1|1|1|3|503|307
chr5_4 exon 3039791 3040776 3039791 ID=Msa0830030-mRNA-1:exon:1100;Parent=Msa0830030-mRNA-1
chr5_4 exon 3041741 3042015 3041741 ID=Msa0830030-mRNA-1:exon:1099;Parent=Msa0830030-mRNA-1
chr5_4 exon 3044844 3045103 3044844 ID=Msa0830030-mRNA-1:exon:1098;Parent=Msa0830030-mRNA-1
chr5_4 five_prime_UTR 3045010 3045103 3045010 ID=Msa0830030-mRNA-1:five_prime_utr;Parent=Msa0830030-mRNA-1
chr5_4 CDS 3044844 3045009 3044844 ID=Msa0830030-mRNA-1:cds;Parent=Msa0830030-mRNA-1
chr5_4 CDS 3041741 3042015 3041741 ID=Msa0830030-mRNA-1:cds;Parent=Msa0830030-mRNA-1
chr5_4 CDS 3040294 3040776 3040294 ID=Msa0830030-mRNA-1:cds;Parent=Msa0830030-mRNA-1
chr5_4 three_prime_UTR 3039791 3040293 3039791 ID=Msa0830030-mRNA-1:three_prime_utr;Parent=Msa0830030-mRNA-1
Gene Sequence

>Msa0830030

ATGAGTAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGACTCATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGACCGTAAATATGCAACAGGGCTACGCACAAATCGTGCAACTGCATCAGGTTATTGGAAGGCAACAGGAAAGGACAGAGCTATCCTTCGTAAGGGCACTCTTGTTGGAATGAGAAAGACTTTAGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAGGGTCCTCATGGCCCTCCTAAAATTTCATCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTTTTCTACAAAAACAGAGAAGTTGCTACAAAACCTCCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATGTTTTCCCAAAACCAAACCAACCCAATCTACAACCATATTACAACCAATATGGAACCAAAATTACCTCTAGCCAACAATAACAACAATGCAAGTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTGAAAGCTGTTTTGAGTCAACTATCAAAGATGGAAAGAAACCCTATTAATGATCAAAACCTAAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGTATGCCCCACATGTGGAACAATTTCTAA
Protein sequence

>Msa0830030

MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSMFSQNQTNPIYNHITTNMEPKLPLANNNNNASTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPINDQNLKGSSPSLGEGSSESYLSEVGMPHMWNNF*