Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0513610 | AES71835.1 | 89.706 | 68 | 4 | 2 | 73 | 140 | 1 | 65 | 1.78e-29 | 112 |
| Msa0513610 | AES71835.1 | 93.750 | 64 | 4 | 0 | 1 | 64 | 1 | 64 | 3.01e-33 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0513610 | G7J9J6 | 89.706 | 68 | 4 | 2 | 73 | 140 | 1 | 65 | 8.49e-30 | 112 |
| Msa0513610 | G7J9J6 | 93.750 | 64 | 4 | 0 | 1 | 64 | 1 | 64 | 1.44e-33 | 121 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0421170 | Msa0513610 | 0.854067 | 1.575506e-61 | -8.615850e-47 |
| Msa0513610 | Msa1241820 | 0.800344 | 1.505826e-48 | -8.615850e-47 |
| Msa0513610 | Msa1306200 | 0.805527 | 1.279027e-49 | -8.615850e-47 |
| Msa0513610 | Msa1430430 | 0.910251 | 2.309129e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0513610 | MtrunA17_Chr3g0121081 | 93.750 | 64 | 4 | 0 | 1 | 64 | 1 | 64 | 2.77e-37 | 121 |
| Msa0513610 | MtrunA17_Chr3g0121081 | 89.706 | 68 | 4 | 2 | 73 | 140 | 1 | 65 | 1.63e-33 | 112 |
| Msa0513610 | MtrunA17_Chr2g0281351 | 68.852 | 61 | 15 | 2 | 1 | 61 | 1 | 57 | 1.32e-19 | 76.6 |
| Msa0513610 | MtrunA17_Chr2g0281351 | 69.355 | 62 | 13 | 3 | 73 | 134 | 1 | 56 | 7.99e-18 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCAACGGTGGAGTATT+AGG | 0.287872 | 3_4:-63875564 | Msa0513610:CDS |
| AAAATCAACGGTGGAGTATT+AGG | 0.287872 | 3_4:-63880238 | Msa0513610:CDS |
| AGAAGGAGGACCACATGATA+TGG | 0.373358 | 3_4:+63880117 | None:intergenic |
| ACCTGACCCCGCTTTGGAAT+CGG | 0.376203 | 3_4:+63875522 | None:intergenic |
| AGAAGGAGCAGCACATGATA+TGG | 0.377907 | 3_4:+63875443 | None:intergenic |
| ACCTGACCGCGCTTTGGAAT+CGG | 0.400882 | 3_4:+63880196 | None:intergenic |
| ATCATCACCTGACCGCGCTT+TGG | 0.406692 | 3_4:+63880190 | None:intergenic |
| TCCGATTCCAAAGCGGGGTC+AGG | 0.419316 | 3_4:-63875523 | Msa0513610:CDS |
| ACTAAAAGCTGGACTCTAGA+AGG | 0.426432 | 3_4:+63880100 | None:intergenic |
| ATCACCACCTGACCCCGCTT+TGG | 0.431061 | 3_4:+63875516 | None:intergenic |
| TCCGATTCCAAAGCGCGGTC+AGG | 0.447982 | 3_4:-63880197 | Msa0513610:CDS |
| AAGCGGGGTCAGGTGGTGAT+TGG | 0.451258 | 3_4:-63875513 | Msa0513610:CDS |
| TGACCGTCCGATTCCAAAGC+GGG | 0.457454 | 3_4:-63875529 | Msa0513610:CDS |
| AAGCGCGGTCAGGTGATGAT+TGG | 0.458553 | 3_4:-63880187 | Msa0513610:CDS |
| GTGGTGATTGGAATTGTGTT+GGG | 0.460629 | 3_4:-63875501 | Msa0513610:CDS |
| TTACAAATTAAGCTAAAAGC+TGG | 0.468928 | 3_4:+63875412 | None:intergenic |
| GATTGGAATTGTGTTGGGAT+TGG | 0.472815 | 3_4:-63875496 | Msa0513610:CDS |
| TTACATATTAAACTAAAAGC+TGG | 0.482150 | 3_4:+63880089 | None:intergenic |
| GGTGGTGATTGGAATTGTGT+TGG | 0.485203 | 3_4:-63875502 | Msa0513610:CDS |
| GTGATGATTGGAATTGTGTT+GGG | 0.488885 | 3_4:-63880175 | Msa0513610:CDS |
| AGAACAAAGCAAAGAGAAGA+TGG | 0.494156 | 3_4:-63875622 | Msa0513610:CDS |
| GATTGGAATTGTGTTGGGAT+TGG | 0.504801 | 3_4:-63880170 | Msa0513610:CDS |
| GGTGATGATTGGAATTGTGT+TGG | 0.535256 | 3_4:-63880176 | Msa0513610:CDS |
| AAAAGCTGGACTCTAGAAGA+AGG | 0.550483 | 3_4:+63875426 | None:intergenic |
| GAAGATGCAAACAACTGAGT+TGG | 0.572193 | 3_4:+63880147 | None:intergenic |
| TGTGTTGGGATTGGCCAACT+CGG | 0.572810 | 3_4:-63875487 | Msa0513610:CDS |
| GAAGATGCAAACAACCGAGT+TGG | 0.598645 | 3_4:+63875473 | None:intergenic |
| TCAACGGTGGAGTATTAGGA+AGG | 0.608387 | 3_4:-63880234 | Msa0513610:CDS |
| GATTCCAAAGCGGGGTCAGG+TGG | 0.610196 | 3_4:-63875520 | Msa0513610:CDS |
| CAAAGCAAAGAGAAGATGGA+GGG | 0.621656 | 3_4:-63875618 | Msa0513610:CDS |
| AAAAGCAAAGAGAAGATGGA+GGG | 0.628558 | 3_4:-63880286 | None:intergenic |
| TTCATACGTTCCATATCATG+TGG | 0.638393 | 3_4:-63880127 | Msa0513610:CDS |
| ACAAAGCAAAGAGAAGATGG+AGG | 0.643192 | 3_4:-63875619 | Msa0513610:CDS |
| ACTGCAATCATGAAAATCAA+CGG | 0.647400 | 3_4:-63875576 | Msa0513610:CDS |
| ACTGCAATCATGAAAATCAA+CGG | 0.647400 | 3_4:-63880250 | Msa0513610:CDS |
| GACCCCGCTTTGGAATCGGA+CGG | 0.688444 | 3_4:+63875526 | None:intergenic |
| GACCGCGCTTTGGAATCGGA+CGG | 0.688444 | 3_4:+63880200 | None:intergenic |
| AAAAGCTGGACTCTAGAAGG+AGG | 0.691729 | 3_4:+63880103 | None:intergenic |
| GCAATCATGAAAATCAACGG+TGG | 0.699924 | 3_4:-63875573 | Msa0513610:CDS |
| GCAATCATGAAAATCAACGG+TGG | 0.699924 | 3_4:-63880247 | Msa0513610:CDS |
| GACCGTCCGATTCCAAAGCG+CGG | 0.710213 | 3_4:-63880202 | Msa0513610:CDS |
| GACCGTCCGATTCCAAAGCG+GGG | 0.710779 | 3_4:-63875528 | Msa0513610:CDS |
| GTGACCGTCCGATTCCAAAG+CGG | 0.721311 | 3_4:-63875530 | Msa0513610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGTTTATATTAATAG+AGG | + | chr3_4:63875841-63875860 | None:intergenic | 10.0% |
| !! | CTATTAATATAAACAAAATT+CGG | - | chr3_4:63875841-63875860 | Msa0513610:intron | 10.0% |
| !!! | AATATAATCTTTATTCTTTT+TGG | - | chr3_4:63876097-63876116 | Msa0513610:intron | 10.0% |
| !! | AATAAAATAAATGGAAATTA+AGG | - | chr3_4:63877026-63877045 | Msa0513610:intron | 10.0% |
| !!! | TCTTTTTTTGTATAAATTAT+TGG | - | chr3_4:63877615-63877634 | Msa0513610:intron | 10.0% |
| !! | TTTAATGTGAAAAATAAAAT+AGG | + | chr3_4:63878377-63878396 | None:intergenic | 10.0% |
| !!! | TATTTTTCACATTAAATATT+TGG | - | chr3_4:63878381-63878400 | Msa0513610:intron | 10.0% |
| !! | TAAAAATTAATAAATTGAGA+GGG | + | chr3_4:63878471-63878490 | None:intergenic | 10.0% |
| !! | TTAATTCAAAATTAGTAATA+CGG | + | chr3_4:63878732-63878751 | None:intergenic | 10.0% |
| !! | ACAAAATATTGTTAATAATA+TGG | + | chr3_4:63879203-63879222 | None:intergenic | 10.0% |
| !! | TTTCATATAAATGAAATAAA+TGG | - | chr3_4:63879644-63879663 | Msa0513610:intron | 10.0% |
| !!! | GTATTTAATCTCTAAAAAAA+TGG | + | chr3_4:63875912-63875931 | None:intergenic | 15.0% |
| !! | ATGAATATCTAAACAAAATT+TGG | - | chr3_4:63876752-63876771 | Msa0513610:intron | 15.0% |
| !! | TGAATATCTAAACAAAATTT+GGG | - | chr3_4:63876753-63876772 | Msa0513610:intron | 15.0% |
| !!! | ATTTTAATAATATTCAAACG+TGG | - | chr3_4:63876950-63876969 | Msa0513610:intron | 15.0% |
| !! | GTAAAAATTAATAAATTGAG+AGG | + | chr3_4:63878472-63878491 | None:intergenic | 15.0% |
| !! | TATATATATTTATAAGTCTC+TGG | - | chr3_4:63878612-63878631 | Msa0513610:intron | 15.0% |
| !!! | AAACAACTTTTACTATTATT+AGG | - | chr3_4:63879155-63879174 | Msa0513610:intron | 15.0% |
| !!! | TCCTTATTTAATTAAGTTTA+AGG | - | chr3_4:63879371-63879390 | Msa0513610:intron | 15.0% |
| !!! | CCTTATTTAATTAAGTTTAA+GGG | - | chr3_4:63879372-63879391 | Msa0513610:intron | 15.0% |
| !!! | ATTTTAATTAAAAGTGTGTT+TGG | + | chr3_4:63879444-63879463 | None:intergenic | 15.0% |
| !! | AATGAAATAAATGGAAATTA+AGG | - | chr3_4:63879653-63879672 | Msa0513610:intron | 15.0% |
| !!! | TTTAGATATTTGTTATGTAA+TGG | + | chr3_4:63879947-63879966 | None:intergenic | 15.0% |
| !! | TTACATATTAAACTAAAAGC+TGG | + | chr3_4:63875604-63875623 | None:intergenic | 20.0% |
| !!! | GATGTATTTGTTTCAAATTT+TGG | + | chr3_4:63875887-63875906 | None:intergenic | 20.0% |
| !!! | TTTAATCTCTAAAAAAATGG+TGG | + | chr3_4:63875909-63875928 | None:intergenic | 20.0% |
| !! | AAACATAAATTGATCAAACA+AGG | + | chr3_4:63875941-63875960 | None:intergenic | 20.0% |
| !! | AATTTATGTTTATACTTGAG+AGG | - | chr3_4:63875950-63875969 | Msa0513610:intron | 20.0% |
| !! | TATTCATATTTGACAATTGT+AGG | + | chr3_4:63876022-63876041 | None:intergenic | 20.0% |
| !! | TAGAGAACAATTAAAATTTG+CGG | - | chr3_4:63876046-63876065 | Msa0513610:intron | 20.0% |
| !! | TTGTAATGAAAAATGTGAAA+AGG | + | chr3_4:63876510-63876529 | None:intergenic | 20.0% |
| !!! | ATGAAAATTTCGTCATTTTT+TGG | + | chr3_4:63877003-63877022 | None:intergenic | 20.0% |
| !!! | TAGATATTTTCTTTTGGTAA+TGG | + | chr3_4:63877131-63877150 | None:intergenic | 20.0% |
| !! | AGATGATAAAAATGTGAAAT+TGG | + | chr3_4:63878660-63878679 | None:intergenic | 20.0% |
| !!! | TTCACATTTTTATCATCTTA+AGG | - | chr3_4:63878662-63878681 | Msa0513610:intron | 20.0% |
| !! | AAATACTAGTATTCCAAATT+TGG | + | chr3_4:63878800-63878819 | None:intergenic | 20.0% |
| !!! | TGTTTAGTTCAATTTTTAGA+AGG | - | chr3_4:63879009-63879028 | Msa0513610:intron | 20.0% |
| !!! | GTTTAGTTCAATTTTTAGAA+GGG | - | chr3_4:63879010-63879029 | Msa0513610:intron | 20.0% |
| !!! | TTTAGTTCAATTTTTAGAAG+GGG | - | chr3_4:63879011-63879030 | Msa0513610:intron | 20.0% |
| !!! | TGAGATTTTAAATTAAGACA+AGG | + | chr3_4:63879086-63879105 | None:intergenic | 20.0% |
| !! | TAATAATAAATGTTGTTACG+AGG | + | chr3_4:63879116-63879135 | None:intergenic | 20.0% |
| !!! | TAATAGTAAAAGTTGTTTCA+AGG | + | chr3_4:63879153-63879172 | None:intergenic | 20.0% |
| !! | CCCTTAAACTTAATTAAATA+AGG | + | chr3_4:63879375-63879394 | None:intergenic | 20.0% |
| !!! | ACATCAAATACATTTTGTTT+TGG | + | chr3_4:63879528-63879547 | None:intergenic | 20.0% |
| !!! | ATGAAAATTACGTCATTTTT+TGG | + | chr3_4:63879630-63879649 | None:intergenic | 20.0% |
| !! | TTGCCTATTAAAAAAAAAAG+TGG | - | chr3_4:63879870-63879889 | Msa0513610:intron | 20.0% |
| !! | TGCCTATTAAAAAAAAAAGT+GGG | - | chr3_4:63879871-63879890 | Msa0513610:intron | 20.0% |
| ! | ACATTACTAGAATTTCGTTT+AGG | + | chr3_4:63875685-63875704 | None:intergenic | 25.0% |
| !!! | TTGGACCAAGTAATATTTTT+TGG | + | chr3_4:63875868-63875887 | None:intergenic | 25.0% |
| ! | ATAAATTGATCAAACAAGGT+GGG | + | chr3_4:63875937-63875956 | None:intergenic | 25.0% |
| ! | GAGAGAGATTTATATAGTAT+TGG | - | chr3_4:63875984-63876003 | Msa0513610:intron | 25.0% |
| ! | AAAGATGGTATAATCATGAA+CGG | + | chr3_4:63876138-63876157 | None:intergenic | 25.0% |
| ! | TCTCATTTCAATGATTAACA+TGG | - | chr3_4:63876250-63876269 | Msa0513610:intron | 25.0% |
| ! | TCATTATATTAAAGGTTTGC+AGG | + | chr3_4:63876572-63876591 | None:intergenic | 25.0% |
| ! | GCAAACCTTTAATATAATGA+CGG | - | chr3_4:63876572-63876591 | Msa0513610:intron | 25.0% |
| ! | TTATGCCGTCATTATATTAA+AGG | + | chr3_4:63876580-63876599 | None:intergenic | 25.0% |
| !! | TCAAATACATTTTGAATGAC+CGG | + | chr3_4:63876831-63876850 | None:intergenic | 25.0% |
| ! | GTATAGTTAATTAACACAGA+TGG | + | chr3_4:63876784-63876803 | None:intergenic | 25.0% |
| ! | GTTAAAGTGTGAATATCTAT+GGG | + | chr3_4:63876884-63876903 | None:intergenic | 25.0% |
| ! | ATAGATATTCACACTTTAAC+CGG | - | chr3_4:63876884-63876903 | Msa0513610:intron | 25.0% |
| ! | AAATCTGCTGTATCTTTATT+TGG | + | chr3_4:63876934-63876953 | None:intergenic | 25.0% |
| ! | AAAAAAAGAATCCAAACAAG+TGG | - | chr3_4:63877063-63877082 | Msa0513610:intron | 25.0% |
| ! | AAAAAAGAATCCAAACAAGT+GGG | - | chr3_4:63877064-63877083 | Msa0513610:intron | 25.0% |
| !! | CACGTTTAGATATTTTCTTT+TGG | + | chr3_4:63877137-63877156 | None:intergenic | 25.0% |
| ! | CAAAAGAAAATATCTAAACG+TGG | - | chr3_4:63877135-63877154 | Msa0513610:intron | 25.0% |
| !! | GCAAAGGCATATTTAAAATA+TGG | + | chr3_4:63877319-63877338 | None:intergenic | 25.0% |
| ! | AATAACTGTGAAAATTGTGA+AGG | + | chr3_4:63877409-63877428 | None:intergenic | 25.0% |
| ! | TGAAATTTGAAAATCCATGA+CGG | + | chr3_4:63877432-63877451 | None:intergenic | 25.0% |
| !! | GTCAATTTTCATTATTAGAG+TGG | - | chr3_4:63877469-63877488 | Msa0513610:intron | 25.0% |
| !!! | GCTATTATTTTTCTCAATGA+TGG | + | chr3_4:63877966-63877985 | None:intergenic | 25.0% |
| !! | TCCATTTCTTTTATTGTTAC+TGG | - | chr3_4:63878138-63878157 | Msa0513610:intron | 25.0% |
| ! | ACCAGTAACAATAAAAGAAA+TGG | + | chr3_4:63878142-63878161 | None:intergenic | 25.0% |
| ! | TGACTTTATAATGCCAATAT+TGG | - | chr3_4:63878317-63878336 | Msa0513610:intron | 25.0% |
| ! | GACTTTATAATGCCAATATT+GGG | - | chr3_4:63878318-63878337 | Msa0513610:intron | 25.0% |
| ! | GAAAACAAATTTACAACGTT+TGG | + | chr3_4:63878498-63878517 | None:intergenic | 25.0% |
| ! | TATCTATACAAACAGTGATT+AGG | + | chr3_4:63878538-63878557 | None:intergenic | 25.0% |
| ! | GACTTTAAACAAATGTTGAA+TGG | + | chr3_4:63878566-63878585 | None:intergenic | 25.0% |
| !!! | TTAAAGTCAGTTTTAGTTCA+TGG | - | chr3_4:63878578-63878597 | Msa0513610:intron | 25.0% |
| !! | TTTTTATCATCTTAAGGACT+TGG | - | chr3_4:63878668-63878687 | Msa0513610:intron | 25.0% |
| ! | AAGTAATGAAAGTTGTTACA+AGG | + | chr3_4:63879262-63879281 | None:intergenic | 25.0% |
| !!! | GGAATAATGGATTAGTAATA+GGG | + | chr3_4:63879295-63879314 | None:intergenic | 25.0% |
| !!! | TGGAATAATGGATTAGTAAT+AGG | + | chr3_4:63879296-63879315 | None:intergenic | 25.0% |
| !! | TCTTTTGTTAAGACTTAAGA+TGG | + | chr3_4:63879552-63879571 | None:intergenic | 25.0% |
| !!! | TGCCCACTTTTTTTTTTAAT+AGG | + | chr3_4:63879876-63879895 | None:intergenic | 25.0% |
| ! | ATTAAAAAAAAAAGTGGGCA+TGG | - | chr3_4:63879876-63879895 | Msa0513610:intron | 25.0% |
| ! | ACATAACAAATATCTAAACG+TGG | - | chr3_4:63879949-63879968 | Msa0513610:intron | 25.0% |
| ACTGCAATCATGAAAATCAA+CGG | - | chr3_4:63875440-63875459 | Msa0513610:CDS | 30.0% | |
| TCGGTCCAAAAAATATTACT+TGG | - | chr3_4:63875860-63875879 | Msa0513610:intron | 30.0% | |
| TAAATTGATCAAACAAGGTG+GGG | + | chr3_4:63875936-63875955 | None:intergenic | 30.0% | |
| CATAAATTGATCAAACAAGG+TGG | + | chr3_4:63875938-63875957 | None:intergenic | 30.0% | |
| TTATGTTTATACTTGAGAGG+AGG | - | chr3_4:63875953-63875972 | Msa0513610:intron | 30.0% | |
| TATGTTTATACTTGAGAGGA+GGG | - | chr3_4:63875954-63875973 | Msa0513610:intron | 30.0% | |
| ! | GAATCTTTTCTCAAGAAAGA+TGG | + | chr3_4:63876153-63876172 | None:intergenic | 30.0% |
| CAAGTCTTACTAAAGAAGAT+GGG | + | chr3_4:63876300-63876319 | None:intergenic | 30.0% | |
| ACAAGTCTTACTAAAGAAGA+TGG | + | chr3_4:63876301-63876320 | None:intergenic | 30.0% | |
| AAAACTCTCCTTTCAATTCA+AGG | + | chr3_4:63876331-63876350 | None:intergenic | 30.0% | |
| ! | ATTGAAAGGAGAGTTTTCAT+TGG | - | chr3_4:63876334-63876353 | Msa0513610:intron | 30.0% |
| AGAGATATTCACACTTTAAC+CGG | - | chr3_4:63876809-63876828 | Msa0513610:intron | 30.0% | |
| GGTTAAAGTGTGAATATCTA+TGG | + | chr3_4:63876885-63876904 | None:intergenic | 30.0% | |
| TCTGAAAAAATGACATGTGT+TGG | - | chr3_4:63876976-63876995 | Msa0513610:intron | 30.0% | |
| CTGAAAAAATGACATGTGTT+GGG | - | chr3_4:63876977-63876996 | Msa0513610:intron | 30.0% | |
| CATGGTGTATAAAATATCGT+GGG | - | chr3_4:63877087-63877106 | Msa0513610:intron | 30.0% | |
| ATGGTGTATAAAATATCGTG+GGG | - | chr3_4:63877088-63877107 | Msa0513610:intron | 30.0% | |
| ATATCTAAACGTGGCATAAA+TGG | - | chr3_4:63877144-63877163 | Msa0513610:intron | 30.0% | |
| !! | GTCGTTTTCAACACATTTTT+TGG | - | chr3_4:63877195-63877214 | Msa0513610:intron | 30.0% |
| !! | TTGGTCTTAACACAAATCTA+TGG | - | chr3_4:63877214-63877233 | Msa0513610:intron | 30.0% |
| ATGTCTGCATTCAACATAAT+TGG | - | chr3_4:63877243-63877262 | Msa0513610:intron | 30.0% | |
| !!! | ATGCACTTTTTTTCAAGCAA+AGG | + | chr3_4:63877335-63877354 | None:intergenic | 30.0% |
| GATCAACATTGAAGCTAATT+TGG | - | chr3_4:63877694-63877713 | Msa0513610:intron | 30.0% | |
| GCATTATAAAGTCAATGACT+TGG | + | chr3_4:63878311-63878330 | None:intergenic | 30.0% | |
| ! | AAGAGCATAATACCCAATAT+TGG | + | chr3_4:63878333-63878352 | None:intergenic | 30.0% |
| AAATGATCACATGAGTTAGT+AGG | + | chr3_4:63878416-63878435 | None:intergenic | 30.0% | |
| TACTAACTCATGTGATCATT+TGG | - | chr3_4:63878415-63878434 | Msa0513610:intron | 30.0% | |
| ACTAACTCATGTGATCATTT+GGG | - | chr3_4:63878416-63878435 | Msa0513610:intron | 30.0% | |
| ! | TGATCATTTGGGATTCAATT+TGG | - | chr3_4:63878427-63878446 | Msa0513610:intron | 30.0% |
| ACAAATTTACAACGTTTGGT+TGG | + | chr3_4:63878494-63878513 | None:intergenic | 30.0% | |
| TGATTAGGTACTCAAAAGTA+AGG | + | chr3_4:63878523-63878542 | None:intergenic | 30.0% | |
| !! | AAGGACTTGGTTTAATTTGT+TGG | - | chr3_4:63878681-63878700 | Msa0513610:intron | 30.0% |
| ! | TGAAAGATTTTCCTTCTTGT+CGG | - | chr3_4:63878774-63878793 | Msa0513610:intron | 30.0% |
| !!! | TTTGTTTTGGTTCGAGAATT+AGG | + | chr3_4:63879515-63879534 | None:intergenic | 30.0% |
| GTCTTAACAAAAGAACATGA+AGG | - | chr3_4:63879558-63879577 | Msa0513610:intron | 30.0% | |
| ! | TCTTGATAATCTAGCAAGTA+AGG | - | chr3_4:63879581-63879600 | Msa0513610:intron | 30.0% |
| ACAAAAGAGTTCAAACAAGT+GGG | - | chr3_4:63879679-63879698 | Msa0513610:intron | 30.0% | |
| ! | ACGATATTTTATACACCATG+TGG | + | chr3_4:63877087-63877106 | None:intergenic | 30.0% |
| ACATGGTGTATAAAATATCG+TGG | - | chr3_4:63879902-63879921 | Msa0513610:intron | 30.0% | |
| CATGGTGTATAAAATATCGT+GGG | - | chr3_4:63877087-63877106 | Msa0513610:intron | 30.0% | |
| ATGGTGTATAAAATATCGTG+GGG | - | chr3_4:63877088-63877107 | Msa0513610:intron | 30.0% | |
| !!! | AAGATGCTCTTGTTTTGTTT+TGG | + | chr3_4:63880013-63880032 | None:intergenic | 30.0% |
| ACTGCAATCATGAAAATCAA+CGG | - | chr3_4:63875440-63875459 | Msa0513610:CDS | 30.0% | |
| ! | AAAATCAACGGTGGAGTATT+AGG | - | chr3_4:63875452-63875471 | Msa0513610:CDS | 35.0% |
| GTGATGATTGGAATTGTGTT+GGG | - | chr3_4:63875515-63875534 | Msa0513610:CDS | 35.0% | |
| TTCATACGTTCCATATCATG+TGG | - | chr3_4:63875563-63875582 | Msa0513610:CDS | 35.0% | |
| ! | TTCGTTTAGGATAGTGTTGA+AGG | + | chr3_4:63875672-63875691 | None:intergenic | 35.0% |
| ATGTTTATACTTGAGAGGAG+GGG | - | chr3_4:63875955-63875974 | Msa0513610:intron | 35.0% | |
| GCAGTGAAAGTTTCATAAGA+GGG | + | chr3_4:63876175-63876194 | None:intergenic | 35.0% | |
| TGCAGTGAAAGTTTCATAAG+AGG | + | chr3_4:63876176-63876195 | None:intergenic | 35.0% | |
| TTTCAAACTACCATCTCTCT+CGG | - | chr3_4:63876210-63876229 | Msa0513610:intron | 35.0% | |
| ATATAAAAACCCGAGAGAGA+TGG | + | chr3_4:63876223-63876242 | None:intergenic | 35.0% | |
| ! | GATTAACATGGTGATGTCAT+CGG | - | chr3_4:63876262-63876281 | Msa0513610:intron | 35.0% |
| TCAAGTCTCCTTGAATTGAA+AGG | - | chr3_4:63876320-63876339 | Msa0513610:intron | 35.0% | |
| CAAATGATGAACAATGGAAG+AGG | - | chr3_4:63876360-63876379 | Msa0513610:intron | 35.0% | |
| ATACATAAGTGAGAAGCAAG+AGG | + | chr3_4:63876422-63876441 | None:intergenic | 35.0% | |
| GGTTAAAGTGTGAATATCTC+TGG | + | chr3_4:63876810-63876829 | None:intergenic | 35.0% | |
| TCTTGATACTCTAGCAAGTA+AGG | - | chr3_4:63876907-63876926 | Msa0513610:intron | 35.0% | |
| GCATGGTGTATAAAATATCG+TGG | - | chr3_4:63877086-63877105 | Msa0513610:intron | 35.0% | |
| GAAACTAACTAACTCTAGCA+AGG | + | chr3_4:63877269-63877288 | None:intergenic | 35.0% | |
| ! | TTTTCACAGTTATTCCGTCA+TGG | - | chr3_4:63877415-63877434 | Msa0513610:intron | 35.0% |
| AGAACCTATTGAAACTGTGT+TGG | - | chr3_4:63877566-63877585 | Msa0513610:intron | 35.0% | |
| TTTGCCAACACAGTTTCAAT+AGG | + | chr3_4:63877573-63877592 | None:intergenic | 35.0% | |
| ! | TTGCCAAGATGATACTTTTG+AGG | - | chr3_4:63877940-63877959 | Msa0513610:intron | 35.0% |
| GAGAAAAATAATAGCACCTC+CGG | - | chr3_4:63877971-63877990 | Msa0513610:intron | 35.0% | |
| AGTTTCTTATCATAGTCACG+AGG | + | chr3_4:63878005-63878024 | None:intergenic | 35.0% | |
| AAACAAGACATTGCTCATAG+AGG | + | chr3_4:63878028-63878047 | None:intergenic | 35.0% | |
| !! | TGTCTTGTTTGCTAGTATTC+TGG | - | chr3_4:63878038-63878057 | Msa0513610:intron | 35.0% |
| GTTCTGATTGTTTACAAACC+TGG | - | chr3_4:63878281-63878300 | Msa0513610:intron | 35.0% | |
| TTAGGTACTCAAAAGTAAGG+TGG | + | chr3_4:63878520-63878539 | None:intergenic | 35.0% | |
| !! | TTCAATTTTTAGAAGGGGAG+AGG | - | chr3_4:63879016-63879035 | Msa0513610:intron | 35.0% |
| TGATGTAGACGATGGAATAA+TGG | + | chr3_4:63879308-63879327 | None:intergenic | 35.0% | |
| TAACAACATGATGTAGACGA+TGG | + | chr3_4:63879316-63879335 | None:intergenic | 35.0% | |
| ! | AAAGTGTGTTTGGTTCACAA+GGG | + | chr3_4:63879434-63879453 | None:intergenic | 35.0% |
| ! | AAAAGTGTGTTTGGTTCACA+AGG | + | chr3_4:63879435-63879454 | None:intergenic | 35.0% |
| !!! | TTTTGGTTCGAGAATTAGGA+GGG | + | chr3_4:63879511-63879530 | None:intergenic | 35.0% |
| TCCAAATAATGACACGTGTT+GGG | - | chr3_4:63879604-63879623 | Msa0513610:intron | 35.0% | |
| GACAAAAGAGTTCAAACAAG+TGG | - | chr3_4:63879678-63879697 | Msa0513610:intron | 35.0% | |
| GATACAACTTTCAATCCACA+AGG | + | chr3_4:63879782-63879801 | None:intergenic | 35.0% | |
| !! | CAAGAAGCACTAATAAGCAA+GGG | + | chr3_4:63879827-63879846 | None:intergenic | 35.0% |
| !! | ACAAGAAGCACTAATAAGCA+AGG | + | chr3_4:63879828-63879847 | None:intergenic | 35.0% |
| GCTTATTAGTGCTTCTTGTA+CGG | - | chr3_4:63879829-63879848 | Msa0513610:intron | 35.0% | |
| AGAACAAAGCAAAGAGAAGA+TGG | - | chr3_4:63880068-63880087 | Msa0513610:intron | 35.0% | |
| ! | AAAATCAACGGTGGAGTATT+AGG | - | chr3_4:63875452-63875471 | Msa0513610:CDS | 35.0% |
| GCAATCATGAAAATCAACGG+TGG | - | chr3_4:63875443-63875462 | Msa0513610:CDS | 40.0% | |
| GGTGATGATTGGAATTGTGT+TGG | - | chr3_4:63875514-63875533 | Msa0513610:CDS | 40.0% | |
| GATTGGAATTGTGTTGGGAT+TGG | - | chr3_4:63875520-63875539 | Msa0513610:CDS | 40.0% | |
| GAAGATGCAAACAACTGAGT+TGG | + | chr3_4:63875546-63875565 | None:intergenic | 40.0% | |
| ACTAAAAGCTGGACTCTAGA+AGG | + | chr3_4:63875593-63875612 | None:intergenic | 40.0% | |
| TGTTTATACTTGAGAGGAGG+GGG | - | chr3_4:63875956-63875975 | Msa0513610:intron | 40.0% | |
| GAGAGAGATGGTAGTTTGAA+AGG | + | chr3_4:63876211-63876230 | None:intergenic | 40.0% | |
| TTCAAACTACCATCTCTCTC+GGG | - | chr3_4:63876211-63876230 | Msa0513610:intron | 40.0% | |
| ! | CTTACTAAAGAAGATGGGCT+TGG | + | chr3_4:63876295-63876314 | None:intergenic | 40.0% |
| TGGCTGCAAATGATGAACAA+TGG | - | chr3_4:63876354-63876373 | Msa0513610:intron | 40.0% | |
| ATAAGTGAGAAGCAAGAGGT+TGG | + | chr3_4:63876418-63876437 | None:intergenic | 40.0% | |
| TATGCATAAGAGTCCCACAT+CGG | - | chr3_4:63876439-63876458 | Msa0513610:intron | 40.0% | |
| ! | ACTTGCTAGAGTATCAAGAC+CGG | + | chr3_4:63876906-63876925 | None:intergenic | 40.0% |
| GTGGCATAAATGGATGACAA+TGG | - | chr3_4:63877154-63877173 | Msa0513610:intron | 40.0% | |
| CTAATAGCTCACAAGTCAGA+GGG | + | chr3_4:63877291-63877310 | None:intergenic | 40.0% | |
| ! | AGAGTGGTTCAAAAAGTGCA+AGG | - | chr3_4:63877485-63877504 | Msa0513610:intron | 40.0% |
| ! | TGGTTCAAAAAGTGCAAGGA+AGG | - | chr3_4:63877489-63877508 | Msa0513610:intron | 40.0% |
| CAACATTGAAGCTTCCAAAC+TGG | - | chr3_4:63877719-63877738 | Msa0513610:intron | 40.0% | |
| CAAGTTCAACACTTCCAGTT+TGG | + | chr3_4:63877736-63877755 | None:intergenic | 40.0% | |
| TGACATCATGACAATGTTCC+AGG | + | chr3_4:63877830-63877849 | None:intergenic | 40.0% | |
| TTGTCATGATGTCACAGAGA+AGG | - | chr3_4:63877836-63877855 | Msa0513610:intron | 40.0% | |
| TGTCATGATGTCACAGAGAA+GGG | - | chr3_4:63877837-63877856 | Msa0513610:intron | 40.0% | |
| !! | TGGCCTCAAAAGTATCATCT+TGG | + | chr3_4:63877946-63877965 | None:intergenic | 40.0% |
| !!! | TCAATTTGGCTCTGCTGTTT+TGG | - | chr3_4:63878441-63878460 | Msa0513610:intron | 40.0% |
| CAGTGTGACATTTGAGTACA+AGG | - | chr3_4:63878827-63878846 | Msa0513610:intron | 40.0% | |
| TGTGACATTTGAGTACAAGG+TGG | - | chr3_4:63878830-63878849 | Msa0513610:intron | 40.0% | |
| GTGACATTTGAGTACAAGGT+GGG | - | chr3_4:63878831-63878850 | Msa0513610:intron | 40.0% | |
| !! | TCTGTTTGGTTCGAGAGTTT+TGG | - | chr3_4:63878954-63878973 | Msa0513610:intron | 40.0% |
| !!! | TTTGGTTCGAGAGTTTTGGA+GGG | - | chr3_4:63878958-63878977 | Msa0513610:intron | 40.0% |
| !! | AATTTTTAGAAGGGGAGAGG+AGG | - | chr3_4:63879019-63879038 | Msa0513610:intron | 40.0% |
| !! | ATTTTTAGAAGGGGAGAGGA+GGG | - | chr3_4:63879020-63879039 | Msa0513610:intron | 40.0% |
| ! | AAGTGTGTTTGGTTCACAAG+GGG | + | chr3_4:63879433-63879452 | None:intergenic | 40.0% |
| !! | AGAGGAGGAATTTTAACGGA+GGG | + | chr3_4:63879482-63879501 | None:intergenic | 40.0% |
| ! | TTTGGTTCGAGAATTAGGAG+GGG | + | chr3_4:63879510-63879529 | None:intergenic | 40.0% |
| !!! | GTTTTGGTTCGAGAATTAGG+AGG | + | chr3_4:63879512-63879531 | None:intergenic | 40.0% |
| GTCCAAATAATGACACGTGT+TGG | - | chr3_4:63879603-63879622 | Msa0513610:intron | 40.0% | |
| TGGATCTTGATTATGCCTTG+TGG | - | chr3_4:63879764-63879783 | Msa0513610:intron | 40.0% | |
| ACAAAGCAAAGAGAAGATGG+AGG | - | chr3_4:63880071-63880090 | Msa0513610:intron | 40.0% | |
| CAAAGCAAAGAGAAGATGGA+GGG | - | chr3_4:63880072-63880091 | Msa0513610:intron | 40.0% | |
| GCAATCATGAAAATCAACGG+TGG | - | chr3_4:63875443-63875462 | Msa0513610:CDS | 40.0% | |
| GTGGTGATTGGAATTGTGTT+GGG | - | chr3_4:63880189-63880208 | Msa0513610:CDS | 40.0% | |
| GATTGGAATTGTGTTGGGAT+TGG | - | chr3_4:63875520-63875539 | Msa0513610:CDS | 40.0% | |
| ! | AAAAGCTGGACTCTAGAAGA+AGG | + | chr3_4:63880267-63880286 | None:intergenic | 40.0% |
| ! | TCAACGGTGGAGTATTAGGA+AGG | - | chr3_4:63875456-63875475 | Msa0513610:CDS | 45.0% |
| AGAAGGAGGACCACATGATA+TGG | + | chr3_4:63875576-63875595 | None:intergenic | 45.0% | |
| ! | AAAAGCTGGACTCTAGAAGG+AGG | + | chr3_4:63875590-63875609 | None:intergenic | 45.0% |
| TGGAAGAGGAATGAGAACTG+TGG | - | chr3_4:63876374-63876393 | Msa0513610:intron | 45.0% | |
| GGAAGAGGAATGAGAACTGT+GGG | - | chr3_4:63876375-63876394 | Msa0513610:intron | 45.0% | |
| AGAATCCAAACAAGTGGGCA+TGG | - | chr3_4:63877069-63877088 | Msa0513610:intron | 45.0% | |
| ATACACCATGCCCACTTGTT+TGG | + | chr3_4:63877077-63877096 | None:intergenic | 45.0% | |
| CCTAATAGCTCACAAGTCAG+AGG | + | chr3_4:63877292-63877311 | None:intergenic | 45.0% | |
| ! | CCTCTGACTTGTGAGCTATT+AGG | - | chr3_4:63877289-63877308 | Msa0513610:intron | 45.0% |
| GGTTTAGATGTAGAAGCCGA+GGG | + | chr3_4:63877809-63877828 | None:intergenic | 45.0% | |
| AGGTTTAGATGTAGAAGCCG+AGG | + | chr3_4:63877810-63877829 | None:intergenic | 45.0% | |
| TCGGCTTCTACATCTAAACC+TGG | - | chr3_4:63877809-63877828 | Msa0513610:intron | 45.0% | |
| TAGTCACGAGGTCGAAAATC+CGG | + | chr3_4:63877993-63878012 | None:intergenic | 45.0% | |
| !! | AGTCAATGACTTGGTTTGCC+AGG | + | chr3_4:63878302-63878321 | None:intergenic | 45.0% |
| TCCTTCTTGTCGGCCAAATT+TGG | - | chr3_4:63878784-63878803 | Msa0513610:intron | 45.0% | |
| TCCAAATTTGGCCGACAAGA+AGG | + | chr3_4:63878788-63878807 | None:intergenic | 45.0% | |
| TTTGAGTACAAGGTGGGTAG+AGG | - | chr3_4:63878837-63878856 | Msa0513610:intron | 45.0% | |
| GGATTTCCTAAGGGTCTGTT+TGG | - | chr3_4:63878940-63878959 | Msa0513610:intron | 45.0% | |
| !! | GTTTGGTTCGAGAGTTTTGG+AGG | - | chr3_4:63878957-63878976 | Msa0513610:intron | 45.0% |
| !!! | TTGGTTCGAGAGTTTTGGAG+GGG | - | chr3_4:63878959-63878978 | Msa0513610:intron | 45.0% |
| !! | TTTTTAGAAGGGGAGAGGAG+GGG | - | chr3_4:63879021-63879040 | Msa0513610:intron | 45.0% |
| ! | AGTGTGTTTGGTTCACAAGG+GGG | + | chr3_4:63879432-63879451 | None:intergenic | 45.0% |
| !! | AGGAATTTTAACGGAGGGGA+GGG | + | chr3_4:63879477-63879496 | None:intergenic | 45.0% |
| !! | GAGGAGGAATTTTAACGGAG+GGG | + | chr3_4:63879481-63879500 | None:intergenic | 45.0% |
| !! | GAGAGGAGGAATTTTAACGG+AGG | + | chr3_4:63879483-63879502 | None:intergenic | 45.0% |
| ! | GGGGAGAGGAGGAATTTTAA+CGG | + | chr3_4:63879486-63879505 | None:intergenic | 45.0% |
| ! | GCCCAACACGTGTCATTATT+TGG | + | chr3_4:63879608-63879627 | None:intergenic | 45.0% |
| AGAGTTCAAACAAGTGGGCA+TGG | - | chr3_4:63879684-63879703 | Msa0513610:intron | 45.0% | |
| TTCAAACAAGTGGGCATGGA+TGG | - | chr3_4:63879688-63879707 | Msa0513610:intron | 45.0% | |
| !! | TGGCTGCCAGCATTTTGTTT+TGG | - | chr3_4:63879723-63879742 | Msa0513610:intron | 45.0% |
| !!! | CTGCCAGCATTTTGTTTTGG+TGG | - | chr3_4:63879726-63879745 | Msa0513610:intron | 45.0% |
| CAGCCACCAAAACAAAATGC+TGG | + | chr3_4:63879732-63879751 | None:intergenic | 45.0% | |
| ! | GGTGGCTGTAGTACTGTTTT+TGG | - | chr3_4:63879744-63879763 | Msa0513610:intron | 45.0% |
| GTGCTTCTTGTACGGACATA+TGG | - | chr3_4:63879837-63879856 | Msa0513610:intron | 45.0% | |
| GGTGGTGATTGGAATTGTGT+TGG | - | chr3_4:63880188-63880207 | Msa0513610:CDS | 45.0% | |
| GAAGATGCAAACAACCGAGT+TGG | + | chr3_4:63880220-63880239 | None:intergenic | 45.0% | |
| AGAAGGAGCAGCACATGATA+TGG | + | chr3_4:63880250-63880269 | None:intergenic | 45.0% | |
| !! | TTTCATATAAATAAAATAAA+TGG | - | chr3_4:63877017-63877036 | Msa0513610:intron | 5.0% |
| !!! | GTAATTTTTATATAATATAA+CGG | + | chr3_4:63878638-63878657 | None:intergenic | 5.0% |
| CTTCCTTGAGTCTCCGATGT+GGG | + | chr3_4:63876455-63876474 | None:intergenic | 50.0% | |
| CGATCCCAAAGAGTTTCCCT+CGG | - | chr3_4:63877790-63877809 | Msa0513610:intron | 50.0% | |
| GAAGCCGAGGGAAACTCTTT+GGG | + | chr3_4:63877797-63877816 | None:intergenic | 50.0% | |
| AGAAGCCGAGGGAAACTCTT+TGG | + | chr3_4:63877798-63877817 | None:intergenic | 50.0% | |
| ATGTCACAGAGAAGGGAGTG+AGG | - | chr3_4:63877844-63877863 | Msa0513610:intron | 50.0% | |
| ATATTTCCCACAACCCTCGC+TGG | - | chr3_4:63878918-63878937 | Msa0513610:intron | 50.0% | |
| TATTTCCCACAACCCTCGCT+GGG | - | chr3_4:63878919-63878938 | Msa0513610:intron | 50.0% | |
| CTCGAACCAAACAGACCCTT+AGG | + | chr3_4:63878949-63878968 | None:intergenic | 50.0% | |
| !!! | TTCGAGAGTTTTGGAGGGGA+GGG | - | chr3_4:63878963-63878982 | Msa0513610:intron | 50.0% |
| ! | TGTTTGGTTCACAAGGGGGA+GGG | + | chr3_4:63879428-63879447 | None:intergenic | 50.0% |
| !! | GGAATTTTAACGGAGGGGAG+GGG | + | chr3_4:63879476-63879495 | None:intergenic | 50.0% |
| !! | GAGGAATTTTAACGGAGGGG+AGG | + | chr3_4:63879478-63879497 | None:intergenic | 50.0% |
| TTCGAGAATTAGGAGGGGAG+GGG | + | chr3_4:63879505-63879524 | None:intergenic | 50.0% | |
| GTTCGAGAATTAGGAGGGGA+GGG | + | chr3_4:63879506-63879525 | None:intergenic | 50.0% | |
| ! | ATGGATGGACCTTCGGTTTG+TGG | - | chr3_4:63879703-63879722 | Msa0513610:intron | 50.0% |
| AAAAGTGGGCATGGACCACA+TGG | - | chr3_4:63879885-63879904 | Msa0513610:intron | 50.0% | |
| !! | TGTGTTGGGATTGGCCAACT+CGG | - | chr3_4:63875529-63875548 | Msa0513610:CDS | 50.0% |
| !! | ACCTGACCGCGCTTTGGAAT+CGG | + | chr3_4:63875497-63875516 | None:intergenic | 55.0% |
| ATCATCACCTGACCGCGCTT+TGG | + | chr3_4:63875503-63875522 | None:intergenic | 55.0% | |
| AAGCGCGGTCAGGTGATGAT+TGG | - | chr3_4:63875503-63875522 | Msa0513610:CDS | 55.0% | |
| AGTCCCACATCGGAGACTCA+AGG | - | chr3_4:63876449-63876468 | Msa0513610:intron | 55.0% | |
| GCTTCCTTGAGTCTCCGATG+TGG | + | chr3_4:63876456-63876475 | None:intergenic | 55.0% | |
| AGAGAAGGGAGTGAGGCTAG+TGG | - | chr3_4:63877851-63877870 | Msa0513610:intron | 55.0% | |
| TCACGAGGTCGAAAATCCGG+AGG | + | chr3_4:63877990-63878009 | None:intergenic | 55.0% | |
| GAAATCCCAGCGAGGGTTGT+GGG | + | chr3_4:63878927-63878946 | None:intergenic | 55.0% | |
| ACCCTCGCTGGGATTTCCTA+AGG | - | chr3_4:63878930-63878949 | Msa0513610:intron | 55.0% | |
| CCCTTAGGAAATCCCAGCGA+GGG | + | chr3_4:63878934-63878953 | None:intergenic | 55.0% | |
| CCCTCGCTGGGATTTCCTAA+GGG | - | chr3_4:63878931-63878950 | Msa0513610:intron | 55.0% | |
| ACCCTTAGGAAATCCCAGCG+AGG | + | chr3_4:63878935-63878954 | None:intergenic | 55.0% | |
| !!! | GTTCGAGAGTTTTGGAGGGG+AGG | - | chr3_4:63878962-63878981 | Msa0513610:intron | 55.0% |
| !!! | TCGAGAGTTTTGGAGGGGAG+GGG | - | chr3_4:63878964-63878983 | Msa0513610:intron | 55.0% |
| ! | GTTTGGTTCACAAGGGGGAG+GGG | + | chr3_4:63879427-63879446 | None:intergenic | 55.0% |
| ! | GTGTTTGGTTCACAAGGGGG+AGG | + | chr3_4:63879429-63879448 | None:intergenic | 55.0% |
| ! | TTTTAACGGAGGGGAGGGGA+GGG | + | chr3_4:63879472-63879491 | None:intergenic | 55.0% |
| !! | ATTTTAACGGAGGGGAGGGG+AGG | + | chr3_4:63879473-63879492 | None:intergenic | 55.0% |
| GGTTCGAGAATTAGGAGGGG+AGG | + | chr3_4:63879507-63879526 | None:intergenic | 55.0% | |
| AGTGGGCATGGATGGACCTT+CGG | - | chr3_4:63879696-63879715 | Msa0513610:intron | 55.0% | |
| GTGACCGTCCGATTCCAAAG+CGG | - | chr3_4:63875486-63875505 | Msa0513610:CDS | 55.0% | |
| TGACCGTCCGATTCCAAAGC+GGG | - | chr3_4:63875487-63875506 | Msa0513610:CDS | 55.0% | |
| !! | ACCTGACCCCGCTTTGGAAT+CGG | + | chr3_4:63880171-63880190 | None:intergenic | 55.0% |
| GACCGTCCGATTCCAAAGCG+CGG | - | chr3_4:63875488-63875507 | Msa0513610:CDS | 60.0% | |
| !! | GACCGCGCTTTGGAATCGGA+CGG | + | chr3_4:63875493-63875512 | None:intergenic | 60.0% |
| TCCGATTCCAAAGCGCGGTC+AGG | - | chr3_4:63875493-63875512 | Msa0513610:CDS | 60.0% | |
| GGAAATCCCAGCGAGGGTTG+TGG | + | chr3_4:63878928-63878947 | None:intergenic | 60.0% | |
| !!! | AGAGTTTTGGAGGGGAGGGG+AGG | - | chr3_4:63878967-63878986 | Msa0513610:intron | 60.0% |
| !!! | GAGTTTTGGAGGGGAGGGGA+GGG | - | chr3_4:63878968-63878987 | Msa0513610:intron | 60.0% |
| !!! | AGTTTTGGAGGGGAGGGGAG+GGG | - | chr3_4:63878969-63878988 | Msa0513610:intron | 60.0% |
| TTAGAAGGGGAGAGGAGGGG+AGG | - | chr3_4:63879024-63879043 | Msa0513610:intron | 60.0% | |
| TAGAAGGGGAGAGGAGGGGA+GGG | - | chr3_4:63879025-63879044 | Msa0513610:intron | 60.0% | |
| TTTAACGGAGGGGAGGGGAG+GGG | + | chr3_4:63879471-63879490 | None:intergenic | 60.0% | |
| GAATTAGGAGGGGAGGGGAG+AGG | + | chr3_4:63879500-63879519 | None:intergenic | 60.0% | |
| TGCTGGCAGCCACAAACCGA+AGG | + | chr3_4:63879715-63879734 | None:intergenic | 60.0% | |
| GACCGTCCGATTCCAAAGCG+GGG | - | chr3_4:63875488-63875507 | Msa0513610:CDS | 60.0% | |
| !! | GACCCCGCTTTGGAATCGGA+CGG | + | chr3_4:63880167-63880186 | None:intergenic | 60.0% |
| TCCGATTCCAAAGCGGGGTC+AGG | - | chr3_4:63880167-63880186 | Msa0513610:CDS | 60.0% | |
| GATTCCAAAGCGGGGTCAGG+TGG | - | chr3_4:63880170-63880189 | Msa0513610:CDS | 60.0% | |
| ATCACCACCTGACCCCGCTT+TGG | + | chr3_4:63880177-63880196 | None:intergenic | 60.0% | |
| AAGCGGGGTCAGGTGGTGAT+TGG | - | chr3_4:63880177-63880196 | Msa0513610:CDS | 60.0% | |
| AGAAGGGGAGAGGAGGGGAG+GGG | - | chr3_4:63879026-63879045 | Msa0513610:intron | 65.0% | |
| GGTTCACAAGGGGGAGGGGA+GGG | + | chr3_4:63879423-63879442 | None:intergenic | 65.0% | |
| TGGTTCACAAGGGGGAGGGG+AGG | + | chr3_4:63879424-63879443 | None:intergenic | 65.0% | |
| TTAGGAGGGGAGGGGAGAGG+AGG | + | chr3_4:63879497-63879516 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 63875419 | 63880293 | 63875419 | ID=Msa0513610;Name=Msa0513610 |
| chr3_4 | mRNA | 63875419 | 63880293 | 63875419 | ID=Msa0513610-mRNA-1;Parent=Msa0513610;Name=Msa0513610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|2|0|140 |
| chr3_4 | exon | 63880102 | 63880293 | 63880102 | ID=Msa0513610-mRNA-1:exon:16047;Parent=Msa0513610-mRNA-1 |
| chr3_4 | exon | 63875419 | 63875649 | 63875419 | ID=Msa0513610-mRNA-1:exon:16046;Parent=Msa0513610-mRNA-1 |
| chr3_4 | CDS | 63880102 | 63880293 | 63880102 | ID=Msa0513610-mRNA-1:cds;Parent=Msa0513610-mRNA-1 |
| chr3_4 | CDS | 63875419 | 63875649 | 63875419 | ID=Msa0513610-mRNA-1:cds;Parent=Msa0513610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
