Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0516010 | XP_003602195.1 | 96.199 | 342 | 11 | 1 | 1 | 342 | 1 | 340 | 0.0 | 678 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0516010 | sp|Q8H0Y8|WRK41_ARATH | 34.844 | 353 | 166 | 11 | 3 | 338 | 7 | 312 | 1.73e-45 | 160 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0516010 | B3U399 | 96.199 | 342 | 11 | 1 | 1 | 342 | 1 | 340 | 0.0 | 678 |
Gene ID | Type | Classification |
---|---|---|
Msa0516010 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0375920 | Msa0516010 | 0.924969 | 3.454104e-90 | -8.615850e-47 |
Msa0516010 | Msa1025750 | 0.811047 | 8.511150e-51 | -8.615850e-47 |
Msa0516010 | Msa1064510 | 0.800233 | 1.586805e-48 | -8.615850e-47 |
Msa0516010 | Msa1184400 | 0.801050 | 1.081152e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0516010 | MtrunA17_Chr3g0126391 | 96.199 | 342 | 11 | 1 | 1 | 342 | 1 | 340 | 0.0 | 678 |
Msa0516010 | MtrunA17_Chr8g0387981 | 36.483 | 381 | 166 | 17 | 7 | 342 | 12 | 361 | 2.28e-54 | 182 |
Msa0516010 | MtrunA17_Chr7g0275531 | 34.551 | 356 | 173 | 12 | 7 | 342 | 12 | 327 | 4.03e-50 | 170 |
Msa0516010 | MtrunA17_Chr8g0347251 | 45.500 | 200 | 81 | 6 | 7 | 193 | 12 | 196 | 7.18e-45 | 157 |
Msa0516010 | MtrunA17_Chr7g0244981 | 33.333 | 204 | 102 | 4 | 2 | 197 | 9 | 186 | 7.56e-26 | 104 |
Msa0516010 | MtrunA17_Chr7g0244971 | 32.487 | 197 | 97 | 5 | 7 | 194 | 15 | 184 | 6.82e-25 | 102 |
Msa0516010 | MtrunA17_Chr8g0334541 | 33.503 | 197 | 102 | 6 | 8 | 204 | 6 | 173 | 4.70e-22 | 94.4 |
Msa0516010 | MtrunA17_Chr3g0128671 | 32.301 | 226 | 105 | 10 | 13 | 223 | 23 | 215 | 4.24e-20 | 89.4 |
Msa0516010 | MtrunA17_Chr8g0350621 | 29.000 | 200 | 116 | 4 | 1 | 198 | 1 | 176 | 4.27e-20 | 88.6 |
Msa0516010 | MtrunA17_Chr1g0147881 | 40.876 | 137 | 54 | 8 | 84 | 201 | 207 | 335 | 5.44e-19 | 86.7 |
Msa0516010 | MtrunA17_Chr2g0315371 | 31.220 | 205 | 106 | 7 | 5 | 192 | 14 | 200 | 7.61e-19 | 85.5 |
Msa0516010 | MtrunA17_Chr5g0431811 | 38.384 | 99 | 61 | 0 | 125 | 223 | 664 | 762 | 3.64e-18 | 85.9 |
Msa0516010 | MtrunA17_Chr5g0428351 | 42.697 | 89 | 51 | 0 | 104 | 192 | 154 | 242 | 3.79e-18 | 84.0 |
Msa0516010 | MtrunA17_Chr2g0315361 | 31.034 | 203 | 116 | 5 | 5 | 192 | 14 | 207 | 3.92e-17 | 80.9 |
Msa0516010 | MtrunA17_Chr2g0315381 | 39.773 | 88 | 45 | 1 | 105 | 192 | 124 | 203 | 4.57e-17 | 80.5 |
Msa0516010 | MtrunA17_Chr5g0401821 | 44.828 | 87 | 44 | 3 | 104 | 190 | 172 | 254 | 1.55e-16 | 78.6 |
Msa0516010 | MtrunA17_Chr8g0348311 | 42.105 | 95 | 52 | 2 | 134 | 227 | 156 | 248 | 3.39e-16 | 78.6 |
Msa0516010 | MtrunA17_Chr8g0387501 | 51.562 | 64 | 29 | 1 | 127 | 190 | 123 | 184 | 4.08e-16 | 77.4 |
Msa0516010 | MtrunA17_Chr4g0053281 | 41.509 | 106 | 48 | 6 | 101 | 199 | 236 | 334 | 5.25e-16 | 77.8 |
Msa0516010 | MtrunA17_Chr7g0248691 | 31.746 | 189 | 122 | 4 | 103 | 286 | 124 | 310 | 1.55e-15 | 76.6 |
Msa0516010 | MtrunA17_Chr1g0184691 | 56.140 | 57 | 23 | 1 | 134 | 190 | 294 | 348 | 3.49e-15 | 75.9 |
Msa0516010 | MtrunA17_Chr7g0270051 | 54.839 | 62 | 26 | 1 | 129 | 190 | 49 | 108 | 5.99e-15 | 73.9 |
Msa0516010 | MtrunA17_Chr8g0379461 | 55.000 | 60 | 25 | 1 | 131 | 190 | 74 | 131 | 1.11e-14 | 72.8 |
Msa0516010 | MtrunA17_Chr7g0218081 | 47.692 | 65 | 30 | 2 | 126 | 190 | 221 | 281 | 1.67e-14 | 74.3 |
Msa0516010 | MtrunA17_Chr7g0218081 | 50.847 | 59 | 26 | 1 | 132 | 190 | 409 | 464 | 2.12e-13 | 70.9 |
Msa0516010 | MtrunA17_Chr2g0319961 | 39.823 | 113 | 54 | 3 | 86 | 190 | 29 | 135 | 1.72e-14 | 72.4 |
Msa0516010 | MtrunA17_Chr4g0071521 | 36.522 | 115 | 65 | 3 | 81 | 190 | 189 | 300 | 1.92e-14 | 73.2 |
Msa0516010 | MtrunA17_Chr2g0284321 | 51.515 | 66 | 27 | 2 | 128 | 190 | 27 | 90 | 2.31e-14 | 71.2 |
Msa0516010 | MtrunA17_Chr8g0335811 | 52.542 | 59 | 25 | 1 | 132 | 190 | 153 | 208 | 2.53e-14 | 71.2 |
Msa0516010 | MtrunA17_Chr8g0383351 | 52.542 | 59 | 25 | 1 | 132 | 190 | 159 | 214 | 2.85e-14 | 71.2 |
Msa0516010 | MtrunA17_Chr7g0224801 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 3.35e-14 | 69.7 |
Msa0516010 | MtrunA17_Chr7g0238921 | 55.738 | 61 | 24 | 1 | 130 | 190 | 121 | 178 | 3.47e-14 | 72.4 |
Msa0516010 | MtrunA17_Chr2g0293481 | 44.231 | 104 | 50 | 5 | 134 | 233 | 268 | 367 | 4.20e-14 | 73.2 |
Msa0516010 | MtrunA17_Chr7g0270831 | 51.351 | 74 | 33 | 2 | 118 | 190 | 200 | 271 | 4.92e-14 | 72.8 |
Msa0516010 | MtrunA17_Chr3g0129361 | 52.542 | 59 | 25 | 1 | 132 | 190 | 143 | 198 | 9.17e-14 | 69.7 |
Msa0516010 | MtrunA17_Chr7g0248721 | 35.156 | 128 | 72 | 4 | 67 | 192 | 80 | 198 | 1.08e-13 | 69.3 |
Msa0516010 | MtrunA17_Chr4g0051881 | 41.558 | 77 | 42 | 1 | 132 | 208 | 177 | 250 | 1.19e-13 | 70.9 |
Msa0516010 | MtrunA17_Chr1g0202461 | 41.176 | 85 | 42 | 2 | 106 | 190 | 240 | 316 | 1.39e-13 | 71.2 |
Msa0516010 | MtrunA17_Chr7g0270191 | 51.667 | 60 | 26 | 1 | 132 | 191 | 144 | 200 | 1.72e-13 | 70.1 |
Msa0516010 | MtrunA17_Chr7g0249311 | 53.448 | 58 | 23 | 2 | 133 | 190 | 179 | 232 | 1.87e-13 | 71.2 |
Msa0516010 | MtrunA17_Chr7g0249311 | 33.333 | 129 | 66 | 5 | 93 | 207 | 350 | 472 | 2.93e-11 | 64.7 |
Msa0516010 | MtrunA17_Chr5g0418781 | 52.542 | 59 | 25 | 1 | 132 | 190 | 123 | 178 | 2.39e-13 | 69.3 |
Msa0516010 | MtrunA17_Chr5g0443131 | 49.206 | 63 | 27 | 2 | 132 | 192 | 156 | 215 | 3.60e-13 | 69.3 |
Msa0516010 | MtrunA17_Chr3g0079691 | 47.368 | 76 | 34 | 3 | 131 | 204 | 278 | 349 | 4.35e-13 | 70.1 |
Msa0516010 | MtrunA17_Chr3g0079691 | 33.628 | 113 | 65 | 3 | 132 | 242 | 494 | 598 | 1.06e-11 | 65.9 |
Msa0516010 | MtrunA17_Chr1g0150801 | 50.000 | 60 | 27 | 1 | 132 | 191 | 101 | 157 | 4.49e-13 | 66.6 |
Msa0516010 | MtrunA17_Chr7g0228941 | 50.877 | 57 | 26 | 1 | 134 | 190 | 53 | 107 | 5.66e-13 | 65.1 |
Msa0516010 | MtrunA17_Chr4g0042831 | 50.000 | 58 | 26 | 1 | 133 | 190 | 145 | 199 | 5.83e-13 | 69.3 |
Msa0516010 | MtrunA17_Chr4g0042831 | 47.458 | 59 | 28 | 1 | 132 | 190 | 277 | 332 | 3.49e-11 | 63.9 |
Msa0516010 | MtrunA17_Chr2g0322391 | 54.237 | 59 | 25 | 1 | 132 | 190 | 348 | 404 | 5.94e-13 | 69.7 |
Msa0516010 | MtrunA17_Chr1g0194481 | 50.000 | 60 | 27 | 1 | 132 | 191 | 157 | 213 | 1.15e-12 | 67.8 |
Msa0516010 | MtrunA17_Chr5g0445311 | 49.153 | 59 | 27 | 1 | 132 | 190 | 363 | 418 | 1.36e-12 | 68.6 |
Msa0516010 | MtrunA17_Chr5g0445311 | 47.059 | 68 | 30 | 3 | 125 | 190 | 190 | 253 | 2.65e-11 | 64.7 |
Msa0516010 | MtrunA17_Chr5g0418191 | 46.479 | 71 | 33 | 3 | 121 | 190 | 138 | 204 | 1.57e-12 | 68.2 |
Msa0516010 | MtrunA17_Chr5g0418191 | 49.153 | 59 | 27 | 1 | 132 | 190 | 319 | 374 | 2.34e-12 | 67.8 |
Msa0516010 | MtrunA17_Chr2g0294231 | 50.000 | 60 | 27 | 1 | 132 | 191 | 202 | 258 | 1.62e-12 | 67.8 |
Msa0516010 | MtrunA17_Chr2g0288871 | 52.542 | 59 | 26 | 1 | 132 | 190 | 304 | 360 | 1.64e-12 | 68.2 |
Msa0516010 | MtrunA17_Chr7g0263531 | 34.454 | 119 | 58 | 5 | 87 | 190 | 302 | 415 | 1.71e-12 | 68.2 |
Msa0516010 | MtrunA17_Chr7g0263531 | 50.000 | 60 | 26 | 2 | 131 | 190 | 187 | 242 | 8.83e-12 | 65.9 |
Msa0516010 | MtrunA17_Chr8g0386241 | 36.842 | 76 | 45 | 1 | 132 | 207 | 102 | 174 | 1.96e-12 | 65.1 |
Msa0516010 | MtrunA17_Chr3g0101131 | 49.153 | 59 | 27 | 1 | 132 | 190 | 414 | 469 | 2.33e-12 | 67.8 |
Msa0516010 | MtrunA17_Chr3g0101131 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.13e-11 | 65.1 |
Msa0516010 | MtrunA17_Chr4g0075201 | 51.667 | 60 | 27 | 1 | 132 | 191 | 266 | 323 | 2.49e-12 | 67.8 |
Msa0516010 | MtrunA17_Chr3g0139021 | 50.877 | 57 | 26 | 1 | 134 | 190 | 315 | 369 | 3.02e-12 | 67.0 |
Msa0516010 | MtrunA17_Chr1g0150281 | 52.632 | 57 | 25 | 1 | 134 | 190 | 141 | 195 | 4.14e-12 | 65.9 |
Msa0516010 | MtrunA17_Chr7g0249301 | 52.542 | 59 | 24 | 2 | 132 | 190 | 61 | 115 | 4.36e-12 | 66.6 |
Msa0516010 | MtrunA17_Chr5g0432161 | 50.000 | 58 | 25 | 2 | 133 | 190 | 244 | 297 | 1.03e-11 | 65.9 |
Msa0516010 | MtrunA17_Chr5g0432161 | 49.153 | 59 | 27 | 1 | 132 | 190 | 420 | 475 | 1.87e-11 | 65.1 |
Msa0516010 | MtrunA17_Chr3g0106491 | 46.032 | 63 | 31 | 1 | 132 | 194 | 364 | 423 | 1.38e-11 | 65.5 |
Msa0516010 | MtrunA17_Chr3g0106491 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 1.64e-11 | 65.1 |
Msa0516010 | MtrunA17_Chr7g0243891 | 50.000 | 58 | 25 | 2 | 133 | 190 | 216 | 269 | 1.78e-11 | 65.1 |
Msa0516010 | MtrunA17_Chr4g0068541 | 47.458 | 59 | 28 | 1 | 132 | 190 | 207 | 262 | 1.83e-11 | 64.7 |
Msa0516010 | MtrunA17_Chr2g0302391 | 33.562 | 146 | 73 | 5 | 134 | 262 | 212 | 350 | 2.18e-11 | 64.7 |
Msa0516010 | MtrunA17_Chr4g0004911 | 40.909 | 88 | 48 | 2 | 104 | 190 | 306 | 390 | 2.22e-11 | 64.7 |
Msa0516010 | MtrunA17_Chr4g0004911 | 46.552 | 58 | 28 | 2 | 133 | 190 | 184 | 238 | 7.17e-11 | 63.2 |
Msa0516010 | MtrunA17_Chr5g0447701 | 47.541 | 61 | 29 | 1 | 130 | 190 | 249 | 306 | 2.23e-11 | 64.3 |
Msa0516010 | MtrunA17_Chr7g0216891 | 43.243 | 74 | 39 | 2 | 118 | 190 | 203 | 274 | 7.55e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0516010 | AT4G11070.1 | 34.844 | 353 | 166 | 11 | 3 | 338 | 7 | 312 | 1.76e-46 | 160 |
Msa0516010 | AT4G23810.1 | 35.424 | 271 | 137 | 8 | 3 | 250 | 10 | 265 | 1.86e-46 | 160 |
Msa0516010 | AT5G24110.1 | 39.910 | 223 | 102 | 6 | 5 | 225 | 14 | 206 | 2.72e-42 | 149 |
Msa0516010 | AT4G11070.2 | 32.456 | 342 | 157 | 10 | 3 | 338 | 7 | 280 | 5.70e-40 | 142 |
Msa0516010 | AT2G46400.1 | 30.816 | 331 | 166 | 12 | 1 | 321 | 2 | 279 | 1.13e-30 | 118 |
Msa0516010 | AT2G40750.1 | 32.547 | 212 | 108 | 8 | 5 | 193 | 13 | 212 | 4.70e-25 | 103 |
Msa0516010 | AT3G56400.1 | 33.333 | 186 | 107 | 3 | 7 | 192 | 11 | 179 | 4.83e-24 | 100 |
Msa0516010 | AT2G40740.1 | 59.677 | 62 | 25 | 0 | 131 | 192 | 171 | 232 | 5.13e-22 | 94.7 |
Msa0516010 | AT2G40740.3 | 59.677 | 62 | 25 | 0 | 131 | 192 | 180 | 241 | 6.87e-22 | 94.4 |
Msa0516010 | AT5G01900.1 | 28.708 | 209 | 124 | 5 | 5 | 213 | 6 | 189 | 2.96e-17 | 80.9 |
Msa0516010 | AT1G66550.1 | 26.786 | 224 | 115 | 5 | 8 | 216 | 10 | 199 | 4.33e-17 | 80.1 |
Msa0516010 | AT5G45260.1 | 59.649 | 57 | 23 | 0 | 134 | 190 | 1209 | 1265 | 9.92e-17 | 82.0 |
Msa0516010 | AT1G66550.2 | 27.189 | 217 | 118 | 4 | 8 | 216 | 10 | 194 | 1.85e-16 | 78.2 |
Msa0516010 | AT5G52830.1 | 48.837 | 86 | 36 | 2 | 106 | 191 | 144 | 221 | 5.17e-16 | 78.6 |
Msa0516010 | AT2G23320.1 | 46.667 | 90 | 38 | 5 | 104 | 190 | 213 | 295 | 5.60e-16 | 78.2 |
Msa0516010 | AT1G29280.1 | 56.667 | 60 | 24 | 1 | 131 | 190 | 72 | 129 | 1.02e-15 | 76.3 |
Msa0516010 | AT5G49520.1 | 46.154 | 78 | 39 | 1 | 132 | 209 | 220 | 294 | 1.09e-15 | 77.8 |
Msa0516010 | AT1G66600.1 | 30.481 | 187 | 94 | 4 | 8 | 192 | 10 | 162 | 1.62e-15 | 75.5 |
Msa0516010 | AT4G24240.1 | 40.187 | 107 | 60 | 3 | 84 | 190 | 234 | 336 | 1.78e-15 | 77.0 |
Msa0516010 | AT1G64000.1 | 43.478 | 92 | 41 | 4 | 104 | 192 | 89 | 172 | 2.02e-15 | 74.3 |
Msa0516010 | AT4G01250.1 | 52.308 | 65 | 29 | 1 | 126 | 190 | 121 | 183 | 2.39e-15 | 75.9 |
Msa0516010 | AT4G31550.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 247 | 301 | 4.53e-15 | 75.5 |
Msa0516010 | AT4G31550.2 | 56.140 | 57 | 23 | 1 | 134 | 190 | 246 | 300 | 4.66e-15 | 75.5 |
Msa0516010 | AT2G03340.1 | 33.548 | 155 | 85 | 7 | 45 | 190 | 158 | 303 | 5.38e-15 | 76.3 |
Msa0516010 | AT2G03340.1 | 47.458 | 59 | 28 | 1 | 132 | 190 | 414 | 469 | 1.99e-11 | 65.5 |
Msa0516010 | AT5G41570.1 | 52.381 | 63 | 25 | 2 | 132 | 192 | 97 | 156 | 8.53e-15 | 72.0 |
Msa0516010 | AT2G46130.1 | 50.794 | 63 | 26 | 2 | 132 | 192 | 29 | 88 | 1.54e-14 | 69.3 |
Msa0516010 | AT2G30590.1 | 43.617 | 94 | 42 | 5 | 100 | 190 | 283 | 368 | 1.85e-14 | 73.9 |
Msa0516010 | AT4G26440.1 | 53.846 | 65 | 26 | 2 | 126 | 190 | 171 | 231 | 1.96e-14 | 74.7 |
Msa0516010 | AT4G26440.1 | 43.333 | 90 | 42 | 3 | 132 | 215 | 371 | 457 | 4.15e-12 | 67.4 |
Msa0516010 | AT4G23550.1 | 50.000 | 70 | 33 | 1 | 121 | 190 | 128 | 195 | 2.02e-14 | 73.6 |
Msa0516010 | AT5G28650.1 | 40.179 | 112 | 54 | 3 | 79 | 190 | 219 | 317 | 2.32e-14 | 73.6 |
Msa0516010 | AT2G24570.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 244 | 298 | 2.69e-14 | 73.2 |
Msa0516010 | AT2G44745.1 | 52.542 | 59 | 25 | 1 | 132 | 190 | 144 | 199 | 2.72e-14 | 71.6 |
Msa0516010 | AT4G04450.2 | 39.516 | 124 | 57 | 4 | 100 | 207 | 162 | 283 | 3.09e-14 | 73.6 |
Msa0516010 | AT5G22570.1 | 35.789 | 95 | 61 | 0 | 134 | 228 | 111 | 205 | 4.72e-14 | 72.0 |
Msa0516010 | AT4G04450.1 | 39.516 | 124 | 57 | 4 | 100 | 207 | 256 | 377 | 6.19e-14 | 73.2 |
Msa0516010 | AT4G18170.1 | 46.377 | 69 | 34 | 1 | 132 | 200 | 171 | 236 | 9.88e-14 | 71.6 |
Msa0516010 | AT3G04670.1 | 43.678 | 87 | 45 | 2 | 104 | 190 | 235 | 317 | 1.13e-13 | 71.2 |
Msa0516010 | AT3G58710.1 | 55.000 | 60 | 25 | 1 | 131 | 190 | 69 | 126 | 1.24e-13 | 70.5 |
Msa0516010 | AT3G58710.2 | 55.000 | 60 | 25 | 1 | 131 | 190 | 68 | 125 | 1.28e-13 | 70.5 |
Msa0516010 | AT2G34830.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 216 | 270 | 1.34e-13 | 71.6 |
Msa0516010 | AT2G34830.2 | 56.140 | 57 | 23 | 1 | 134 | 190 | 225 | 279 | 1.41e-13 | 71.6 |
Msa0516010 | AT5G26170.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 112 | 167 | 1.78e-13 | 68.2 |
Msa0516010 | AT5G07100.2 | 42.222 | 90 | 43 | 3 | 111 | 194 | 113 | 199 | 1.89e-13 | 68.9 |
Msa0516010 | AT5G07100.2 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.56e-11 | 63.5 |
Msa0516010 | AT5G07100.4 | 42.222 | 90 | 43 | 3 | 111 | 194 | 113 | 199 | 1.89e-13 | 68.9 |
Msa0516010 | AT5G07100.4 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.56e-11 | 63.5 |
Msa0516010 | AT5G07100.5 | 42.222 | 90 | 43 | 3 | 111 | 194 | 113 | 199 | 1.89e-13 | 68.9 |
Msa0516010 | AT5G07100.5 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.56e-11 | 63.5 |
Msa0516010 | AT5G07100.3 | 42.222 | 90 | 43 | 3 | 111 | 194 | 113 | 199 | 1.89e-13 | 68.9 |
Msa0516010 | AT5G07100.3 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.56e-11 | 63.5 |
Msa0516010 | AT1G13960.1 | 42.169 | 83 | 43 | 3 | 108 | 190 | 205 | 282 | 2.02e-13 | 71.6 |
Msa0516010 | AT1G13960.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 408 | 463 | 2.19e-12 | 68.2 |
Msa0516010 | AT1G80590.1 | 28.125 | 224 | 108 | 6 | 8 | 228 | 10 | 183 | 2.04e-13 | 69.3 |
Msa0516010 | AT5G07100.1 | 41.304 | 92 | 45 | 3 | 111 | 196 | 206 | 294 | 2.06e-13 | 70.5 |
Msa0516010 | AT5G07100.1 | 46.552 | 58 | 28 | 1 | 133 | 190 | 117 | 171 | 1.39e-11 | 65.1 |
Msa0516010 | AT2G37260.2 | 46.377 | 69 | 34 | 1 | 122 | 190 | 256 | 321 | 2.35e-13 | 70.5 |
Msa0516010 | AT2G37260.3 | 46.377 | 69 | 34 | 1 | 122 | 190 | 258 | 323 | 2.38e-13 | 70.5 |
Msa0516010 | AT2G37260.1 | 46.377 | 69 | 34 | 1 | 122 | 190 | 338 | 403 | 2.44e-13 | 70.9 |
Msa0516010 | AT3G01080.3 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 3.46e-13 | 70.1 |
Msa0516010 | AT1G13960.2 | 42.169 | 83 | 43 | 3 | 108 | 190 | 52 | 129 | 3.51e-13 | 70.1 |
Msa0516010 | AT1G13960.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 255 | 310 | 2.67e-12 | 67.4 |
Msa0516010 | AT1G29860.1 | 46.377 | 69 | 34 | 1 | 132 | 200 | 135 | 200 | 4.45e-13 | 68.9 |
Msa0516010 | AT4G26640.7 | 37.079 | 89 | 53 | 1 | 132 | 220 | 340 | 425 | 6.03e-13 | 70.1 |
Msa0516010 | AT4G26640.7 | 50.000 | 58 | 25 | 2 | 133 | 190 | 171 | 224 | 9.35e-11 | 63.2 |
Msa0516010 | AT3G01080.1 | 48.611 | 72 | 33 | 2 | 131 | 202 | 165 | 232 | 6.10e-13 | 69.7 |
Msa0516010 | AT3G01080.1 | 39.560 | 91 | 47 | 2 | 105 | 190 | 273 | 360 | 5.90e-12 | 66.6 |
Msa0516010 | AT3G01080.2 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 6.50e-13 | 69.7 |
Msa0516010 | AT3G01080.2 | 39.560 | 91 | 47 | 2 | 105 | 190 | 311 | 398 | 5.02e-12 | 67.0 |
Msa0516010 | AT4G26640.1 | 37.079 | 89 | 53 | 1 | 132 | 220 | 308 | 393 | 6.56e-13 | 69.7 |
Msa0516010 | AT4G26640.2 | 37.079 | 89 | 53 | 1 | 132 | 220 | 380 | 465 | 6.95e-13 | 70.1 |
Msa0516010 | AT4G26640.5 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.35e-13 | 69.3 |
Msa0516010 | AT4G26640.6 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.35e-13 | 69.3 |
Msa0516010 | AT4G26640.4 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.35e-13 | 69.3 |
Msa0516010 | AT4G26640.3 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.35e-13 | 69.3 |
Msa0516010 | AT1G30650.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 218 | 272 | 9.90e-13 | 69.3 |
Msa0516010 | AT4G01720.1 | 54.237 | 59 | 25 | 1 | 132 | 190 | 238 | 294 | 1.08e-12 | 69.3 |
Msa0516010 | AT1G66560.1 | 45.000 | 60 | 33 | 0 | 133 | 192 | 103 | 162 | 1.13e-12 | 67.4 |
Msa0516010 | AT1G69310.4 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.17e-12 | 67.8 |
Msa0516010 | AT1G69310.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.17e-12 | 67.8 |
Msa0516010 | AT1G69310.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.17e-12 | 67.8 |
Msa0516010 | AT5G46350.1 | 45.455 | 66 | 33 | 1 | 132 | 197 | 182 | 244 | 1.86e-12 | 67.8 |
Msa0516010 | AT2G25000.2 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.47e-12 | 66.2 |
Msa0516010 | AT2G25000.4 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.47e-12 | 66.2 |
Msa0516010 | AT5G56270.1 | 49.231 | 65 | 29 | 2 | 126 | 190 | 266 | 326 | 3.00e-12 | 68.2 |
Msa0516010 | AT1G62300.1 | 47.297 | 74 | 36 | 2 | 118 | 190 | 296 | 367 | 3.25e-12 | 67.8 |
Msa0516010 | AT2G25000.3 | 50.000 | 62 | 29 | 1 | 132 | 193 | 124 | 183 | 3.35e-12 | 66.2 |
Msa0516010 | AT2G04880.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 282 | 337 | 3.91e-12 | 67.4 |
Msa0516010 | AT2G25000.1 | 50.000 | 62 | 29 | 1 | 132 | 193 | 145 | 204 | 3.91e-12 | 66.2 |
Msa0516010 | AT2G04880.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 306 | 361 | 4.43e-12 | 67.4 |
Msa0516010 | AT5G13080.1 | 44.000 | 75 | 39 | 1 | 132 | 206 | 66 | 137 | 5.32e-12 | 63.5 |
Msa0516010 | AT4G39410.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 222 | 277 | 6.80e-12 | 65.9 |
Msa0516010 | AT3G01970.1 | 50.000 | 60 | 27 | 1 | 132 | 191 | 64 | 120 | 8.06e-12 | 62.8 |
Msa0516010 | AT4G22070.4 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.19e-11 | 66.2 |
Msa0516010 | AT4G22070.3 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.19e-11 | 66.2 |
Msa0516010 | AT4G22070.2 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.19e-11 | 66.2 |
Msa0516010 | AT4G22070.1 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.19e-11 | 66.2 |
Msa0516010 | AT2G47260.1 | 48.333 | 60 | 28 | 1 | 132 | 191 | 173 | 229 | 1.20e-11 | 65.5 |
Msa0516010 | AT3G62340.1 | 50.000 | 60 | 27 | 1 | 132 | 191 | 117 | 173 | 1.73e-11 | 64.3 |
Msa0516010 | AT1G68150.1 | 43.038 | 79 | 42 | 2 | 132 | 209 | 234 | 310 | 2.30e-11 | 64.7 |
Msa0516010 | AT5G43290.1 | 49.180 | 61 | 28 | 1 | 130 | 190 | 111 | 168 | 2.31e-11 | 63.9 |
Msa0516010 | AT2G38470.1 | 47.458 | 59 | 28 | 1 | 132 | 190 | 361 | 416 | 2.93e-11 | 64.7 |
Msa0516010 | AT4G12020.3 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 5.75e-11 | 64.3 |
Msa0516010 | AT4G12020.10 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.18e-11 | 64.3 |
Msa0516010 | AT4G12020.6 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.24e-11 | 64.3 |
Msa0516010 | AT4G12020.8 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.24e-11 | 64.3 |
Msa0516010 | AT4G12020.7 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.31e-11 | 64.3 |
Msa0516010 | AT4G12020.1 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.54e-11 | 64.3 |
Msa0516010 | AT4G12020.9 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.54e-11 | 64.3 |
Msa0516010 | AT4G12020.4 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.76e-11 | 64.3 |
Msa0516010 | AT4G12020.2 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.83e-11 | 64.3 |
Msa0516010 | AT5G64810.1 | 40.299 | 67 | 37 | 1 | 132 | 198 | 109 | 172 | 7.16e-11 | 61.2 |
Msa0516010 | AT4G12020.5 | 37.079 | 89 | 51 | 3 | 102 | 190 | 371 | 454 | 7.56e-11 | 64.3 |
Msa0516010 | AT5G45050.4 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1042 | 1096 | 9.29e-11 | 63.9 |
Msa0516010 | AT5G45050.1 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1181 | 1235 | 9.39e-11 | 63.9 |
Msa0516010 | AT5G45050.2 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1153 | 1207 | 9.61e-11 | 63.9 |
Find 107 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATCTCACTTGCCATATT+TGG | 0.088426 | 3_4:-67439926 | None:intergenic |
AAATCAAGGGTGTTGGAATT+TGG | 0.120759 | 3_4:-67438573 | None:intergenic |
CAAATTTACATACCTCTTTC+TGG | 0.143241 | 3_4:-67439000 | None:intergenic |
CTGTAAAAGACATGTTAATA+TGG | 0.191166 | 3_4:+67438845 | Msa0516010:CDS |
TTTGATCAATTTGAATTTGA+TGG | 0.254177 | 3_4:+67440001 | Msa0516010:CDS |
TGTTAACAATATTTGTTTCT+TGG | 0.254224 | 3_4:-67439667 | None:intergenic |
TATGTTTCCCCTGCAAATTC+AGG | 0.272093 | 3_4:+67439863 | Msa0516010:CDS |
AATCAAGGGTGTTGGAATTT+GGG | 0.292479 | 3_4:-67438572 | None:intergenic |
ATGGAACAAATGATTGGTTT+AGG | 0.306745 | 3_4:-67439787 | None:intergenic |
AAACACACCAACTGCTTCTA+TGG | 0.316690 | 3_4:+67439970 | Msa0516010:CDS |
TGGGAATGAAGGTGAGTTAT+GGG | 0.317021 | 3_4:-67438553 | None:intergenic |
AATCTCACGTGTTTCATTAG+AGG | 0.318717 | 3_4:-67438772 | None:intergenic |
GTTAACAATATTTGTTTCTT+GGG | 0.321184 | 3_4:-67439666 | None:intergenic |
ATGATTGGTTTAGGAAATCT+AGG | 0.323422 | 3_4:-67439778 | None:intergenic |
GTTATGGGAATGGGATATAA+AGG | 0.328464 | 3_4:-67438538 | None:intergenic |
GGACCTTCCACTGCCATTCC+TGG | 0.341337 | 3_4:-67439327 | None:intergenic |
TGACTTATTCCTGAATTTGC+AGG | 0.343271 | 3_4:-67439872 | None:intergenic |
GGAACACTCTAGCAATTAGA+TGG | 0.350756 | 3_4:+67439283 | Msa0516010:intron |
TAATCTCACTTGCCATATTT+GGG | 0.350967 | 3_4:-67439925 | None:intergenic |
ACTTTACATTGTTGCACATA+TGG | 0.353263 | 3_4:-67440270 | None:intergenic |
TTTGTTTCTTGGGTTTGAAA+TGG | 0.354628 | 3_4:-67439656 | None:intergenic |
TTTCAAATGGAACAAATGAT+TGG | 0.363750 | 3_4:-67439793 | None:intergenic |
GGGTATAGTTGGAGAAAATA+TGG | 0.366566 | 3_4:+67439360 | Msa0516010:CDS |
ATTTGAAAAGGCACTTGAAA+TGG | 0.370230 | 3_4:+67438818 | Msa0516010:CDS |
GTCCTAGCTACTCGTATAGT+AGG | 0.387154 | 3_4:+67440195 | Msa0516010:three_prime_UTR |
GAAAAGAAAGGAAACATAAA+AGG | 0.388092 | 3_4:-67438484 | None:intergenic |
CTACTCGTATAGTAGGGATA+TGG | 0.390947 | 3_4:+67440202 | Msa0516010:three_prime_UTR |
GCTTCCAATGTGGTTGGCCT+TGG | 0.391120 | 3_4:+67439617 | Msa0516010:CDS |
TCAAATTCAAATTGATCAAA+TGG | 0.396441 | 3_4:-67439998 | None:intergenic |
TTGGGAATGAAGGTGAGTTA+TGG | 0.406264 | 3_4:-67438554 | None:intergenic |
TTCAAAAGTTGTTCATTTGG+TGG | 0.409814 | 3_4:-67439719 | None:intergenic |
CAAAGCTACTTTCAAGTACA+TGG | 0.413007 | 3_4:-67439817 | None:intergenic |
TTGTTCAAAAGTTGTTCATT+TGG | 0.416222 | 3_4:-67439722 | None:intergenic |
TGCAGTCATAGAAACGTTCT+AGG | 0.419203 | 3_4:+67439506 | Msa0516010:CDS |
TATTTAATTTGATATAGAAT+TGG | 0.427437 | 3_4:-67440373 | None:intergenic |
TGAAGGTGAGTTATGGGAAT+GGG | 0.427675 | 3_4:-67438547 | None:intergenic |
AGTTGTGGAATGTGAAGTTT+TGG | 0.442534 | 3_4:-67440024 | None:intergenic |
CTGAGGCTGAAGGGTATTGT+TGG | 0.449383 | 3_4:-67438881 | None:intergenic |
TATGTGATTTCAAAGATAGT+TGG | 0.452782 | 3_4:-67439569 | None:intergenic |
TGAAATGGATTAGTTAATGT+TGG | 0.458156 | 3_4:-67439641 | None:intergenic |
AGAATTGGAGACTAATTCAA+TGG | 0.460511 | 3_4:-67440358 | None:intergenic |
CTCTTGATGATGGGTATAGT+TGG | 0.464883 | 3_4:+67439349 | Msa0516010:CDS |
AAGGTGGCGAATCTGATATT+CGG | 0.465518 | 3_4:-67438917 | None:intergenic |
TTTATTCAAGTTTGAAAGGA+AGG | 0.465600 | 3_4:+67440318 | Msa0516010:three_prime_UTR |
TTTGTTGATCAAGGCTTTGA+GGG | 0.467796 | 3_4:-67439694 | None:intergenic |
TTTGGGAAAACACTTGGAGT+TGG | 0.470835 | 3_4:-67439908 | None:intergenic |
TTATGGGAATGGGATATAAA+GGG | 0.471676 | 3_4:-67438537 | None:intergenic |
AGATGGCTAAAACTAAATCA+AGG | 0.477564 | 3_4:-67438587 | None:intergenic |
AATTATATCCACATTTGAAA+AGG | 0.478087 | 3_4:+67438806 | Msa0516010:CDS |
AGATAAGCTACTACAAGGAT+TGG | 0.478321 | 3_4:+67438707 | Msa0516010:CDS |
TGTAAAAGACATGTTAATAT+GGG | 0.479565 | 3_4:+67438846 | Msa0516010:CDS |
AGAAAAGAGTGGGAAAAGAA+AGG | 0.480690 | 3_4:-67438496 | None:intergenic |
GTGGAAGGTCCTCTTGATGA+TGG | 0.481430 | 3_4:+67439339 | Msa0516010:CDS |
GTGTTGGAATTTGGGAATGA+AGG | 0.483928 | 3_4:-67438564 | None:intergenic |
GTACGCGTTGAAAATTGAAA+TGG | 0.486419 | 3_4:+67440291 | Msa0516010:three_prime_UTR |
TTCTGGAAGCATTGTGATCA+CGG | 0.489343 | 3_4:-67438983 | None:intergenic |
ATGTGATTTCAAAGATAGTT+GGG | 0.493028 | 3_4:-67439568 | None:intergenic |
CAACAATACCCTTCAGCCTC+AGG | 0.495514 | 3_4:+67438882 | Msa0516010:CDS |
GCCATATTTGGGAAAACACT+TGG | 0.500966 | 3_4:-67439914 | None:intergenic |
ATCACAATGCTTCCAGAAAG+AGG | 0.506811 | 3_4:+67438988 | Msa0516010:CDS |
GACTTATTCCTGAATTTGCA+GGG | 0.514420 | 3_4:-67439871 | None:intergenic |
ACCTTGGATGCACGGCTCCA+AGG | 0.515275 | 3_4:-67439395 | None:intergenic |
TATTCAAGTTTGAAAGGAAG+GGG | 0.515631 | 3_4:+67440320 | Msa0516010:three_prime_UTR |
TCCTTGGAGCCGTGCATCCA+AGG | 0.519224 | 3_4:+67439394 | Msa0516010:CDS |
TAAAACTAAATCAAGGGTGT+TGG | 0.523625 | 3_4:-67438580 | None:intergenic |
CTGTCGGAGTCTTCACTTCG+CGG | 0.524147 | 3_4:-67438951 | None:intergenic |
GCCTAAAATTAATTAAAAGA+TGG | 0.524599 | 3_4:-67438604 | None:intergenic |
TTGTGCATGTGTGGTTTCCT+CGG | 0.524687 | 3_4:-67439592 | None:intergenic |
TCATTCTTAATCTAGCTACA+TGG | 0.525627 | 3_4:+67438665 | Msa0516010:exon |
TATGGTCAGAAAGACATCCT+TGG | 0.530226 | 3_4:+67439378 | Msa0516010:CDS |
GCAAGTGTTCCTGAGGCTGA+AGG | 0.534387 | 3_4:-67438891 | None:intergenic |
GTGTTTGCAGCAGAAGTAGC+TGG | 0.543085 | 3_4:-67439953 | None:intergenic |
TTATTCAAGTTTGAAAGGAA+GGG | 0.553408 | 3_4:+67440319 | Msa0516010:three_prime_UTR |
CATTCTTAATCTAGCTACAT+GGG | 0.568962 | 3_4:+67438666 | Msa0516010:exon |
TCCTAGCTACTCGTATAGTA+GGG | 0.569064 | 3_4:+67440196 | Msa0516010:three_prime_UTR |
CAAGTGTTCCTGAGGCTGAA+GGG | 0.573717 | 3_4:-67438890 | None:intergenic |
GCTACTACAAGGATTGGAGT+TGG | 0.576309 | 3_4:+67438713 | Msa0516010:CDS |
AATTATATACCTTGGATGCA+CGG | 0.579367 | 3_4:-67439403 | None:intergenic |
GATGGCTAAAACTAAATCAA+GGG | 0.581914 | 3_4:-67438586 | None:intergenic |
TGGAAGGTCCTCTTGATGAT+GGG | 0.583275 | 3_4:+67439340 | Msa0516010:CDS |
TATGACCCTGCAAAATCAAG+AGG | 0.585700 | 3_4:+67440160 | Msa0516010:three_prime_UTR |
TATTCGAGTTGAACCAGGAA+TGG | 0.589228 | 3_4:+67439314 | Msa0516010:CDS |
AGTTGAACCAGGAATGGCAG+TGG | 0.591297 | 3_4:+67439320 | Msa0516010:CDS |
TTTGCAGGGGAAACATATGA+AGG | 0.596062 | 3_4:-67439857 | None:intergenic |
ATCACGGTTAAAATCTCTGT+CGG | 0.596477 | 3_4:-67438967 | None:intergenic |
GAACCAGGAATGGCAGTGGA+AGG | 0.596663 | 3_4:+67439324 | Msa0516010:CDS |
TTTGAAGGGAAGAAAAGAGT+GGG | 0.608256 | 3_4:-67438506 | None:intergenic |
TGGACCAAGGCCAACCACAT+TGG | 0.609791 | 3_4:-67439621 | None:intergenic |
ACAATTGCTTCCAATGTGGT+TGG | 0.610236 | 3_4:+67439611 | Msa0516010:CDS |
TTAATAGATAAGCTACTACA+AGG | 0.612960 | 3_4:+67438702 | Msa0516010:CDS |
ATGAAGGTGAGTTATGGGAA+TGG | 0.613244 | 3_4:-67438548 | None:intergenic |
AAACATATTCGAGTTGAACC+AGG | 0.613692 | 3_4:+67439309 | Msa0516010:CDS |
ATTCAAGTTTGAAAGGAAGG+GGG | 0.615638 | 3_4:+67440321 | Msa0516010:three_prime_UTR |
GAACTCTTAGACCTGTTCGT+AGG | 0.617613 | 3_4:-67439745 | None:intergenic |
CTTCGCGGACTACAGCTCAA+AGG | 0.617709 | 3_4:-67438936 | None:intergenic |
CAACTATACCCATCATCAAG+AGG | 0.622097 | 3_4:-67439348 | None:intergenic |
GGAAACTCCATAGAAGCAGT+TGG | 0.622336 | 3_4:-67439977 | None:intergenic |
TGGAAGCAATTGTGCATGTG+TGG | 0.623042 | 3_4:-67439601 | None:intergenic |
TGGCGAATCTGATATTCGGA+TGG | 0.634201 | 3_4:-67438913 | None:intergenic |
ATCTTTGAAATCACATACCG+AGG | 0.643767 | 3_4:+67439575 | Msa0516010:CDS |
CGCGGACTACAGCTCAAAGG+TGG | 0.645554 | 3_4:-67438933 | None:intergenic |
TCGGATGGCAAGTGTTCCTG+AGG | 0.646934 | 3_4:-67438898 | None:intergenic |
TCCCTACTATACGAGTAGCT+AGG | 0.650581 | 3_4:-67440197 | None:intergenic |
ACTTATTCCTGAATTTGCAG+GGG | 0.668793 | 3_4:-67439870 | None:intergenic |
GATTAGTTAATGTTGGACCA+AGG | 0.676942 | 3_4:-67439634 | None:intergenic |
ATGCACAATTGCTTCCAATG+TGG | 0.717502 | 3_4:+67439607 | Msa0516010:CDS |
TTTGCAGCAGAAGTAGCTGG+TGG | 0.728180 | 3_4:-67439950 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATATTTATTTATTTT+AGG | + | chr3_4:67439262-67439281 | Msa0516010:intron | 0.0% |
!!! | TTTTTATATTTATTTATTTT+AGG | + | chr3_4:67439262-67439281 | Msa0516010:intron | 0.0% |
!!! | ATATTTTGATGATTTTTTTT+AGG | + | chr3_4:67440094-67440113 | Msa0516010:three_prime_UTR | 10.0% |
!!! | TATTTAATTTGATATAGAAT+TGG | - | chr3_4:67440376-67440395 | None:intergenic | 10.0% |
!!! | ATATTTTGATGATTTTTTTT+AGG | + | chr3_4:67440094-67440113 | Msa0516010:three_prime_UTR | 10.0% |
!!! | TATTTAATTTGATATAGAAT+TGG | - | chr3_4:67440376-67440395 | None:intergenic | 10.0% |
!!! | GCCATCTTTTAATTAATTTT+AGG | + | chr3_4:67438603-67438622 | Msa0516010:five_prime_UTR | 20.0% |
!! | GCCTAAAATTAATTAAAAGA+TGG | - | chr3_4:67438607-67438626 | None:intergenic | 20.0% |
!! | AGTTAAAAAAATGCTAAACA+AGG | - | chr3_4:67438629-67438648 | None:intergenic | 20.0% |
!! | AATTATATCCACATTTGAAA+AGG | + | chr3_4:67438806-67438825 | Msa0516010:CDS | 20.0% |
!! | TGTAAAAGACATGTTAATAT+GGG | + | chr3_4:67438846-67438865 | Msa0516010:CDS | 20.0% |
!!! | AGTTTTTTTTTTAATACCGT+AGG | + | chr3_4:67439087-67439106 | Msa0516010:intron | 20.0% |
!!! | GTTTTTTTTTTAATACCGTA+GGG | + | chr3_4:67439088-67439107 | Msa0516010:intron | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | - | chr3_4:67439185-67439204 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | - | chr3_4:67439254-67439273 | None:intergenic | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | - | chr3_4:67439414-67439433 | None:intergenic | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | - | chr3_4:67439669-67439688 | None:intergenic | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | - | chr3_4:67439670-67439689 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | - | chr3_4:67440001-67440020 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | + | chr3_4:67440001-67440020 | Msa0516010:CDS | 20.0% |
!!! | GCCATCTTTTAATTAATTTT+AGG | + | chr3_4:67438603-67438622 | Msa0516010:five_prime_UTR | 20.0% |
!! | GCCTAAAATTAATTAAAAGA+TGG | - | chr3_4:67438607-67438626 | None:intergenic | 20.0% |
!! | AGTTAAAAAAATGCTAAACA+AGG | - | chr3_4:67438629-67438648 | None:intergenic | 20.0% |
!! | AATTATATCCACATTTGAAA+AGG | + | chr3_4:67438806-67438825 | Msa0516010:CDS | 20.0% |
!! | TGTAAAAGACATGTTAATAT+GGG | + | chr3_4:67438846-67438865 | Msa0516010:CDS | 20.0% |
!!! | AGTTTTTTTTTTAATACCGT+AGG | + | chr3_4:67439087-67439106 | Msa0516010:intron | 20.0% |
!!! | GTTTTTTTTTTAATACCGTA+GGG | + | chr3_4:67439088-67439107 | Msa0516010:intron | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | - | chr3_4:67439185-67439204 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | - | chr3_4:67439254-67439273 | None:intergenic | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | - | chr3_4:67439414-67439433 | None:intergenic | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | - | chr3_4:67439669-67439688 | None:intergenic | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | - | chr3_4:67439670-67439689 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | - | chr3_4:67440001-67440020 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | + | chr3_4:67440001-67440020 | Msa0516010:CDS | 20.0% |
! | AAAGTTTGACTGAAAAAAAG+TGG | - | chr3_4:67438459-67438478 | None:intergenic | 25.0% |
! | GAAAAGAAAGGAAACATAAA+AGG | - | chr3_4:67438487-67438506 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | + | chr3_4:67438702-67438721 | Msa0516010:CDS | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | - | chr3_4:67438803-67438822 | None:intergenic | 25.0% |
! | CTGTAAAAGACATGTTAATA+TGG | + | chr3_4:67438845-67438864 | Msa0516010:CDS | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | + | chr3_4:67439163-67439182 | Msa0516010:intron | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | - | chr3_4:67439184-67439203 | None:intergenic | 25.0% |
! | ATGTGATTTCAAAGATAGTT+GGG | - | chr3_4:67439571-67439590 | None:intergenic | 25.0% |
! | TATGTGATTTCAAAGATAGT+TGG | - | chr3_4:67439572-67439591 | None:intergenic | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | - | chr3_4:67439644-67439663 | None:intergenic | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | - | chr3_4:67439725-67439744 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | - | chr3_4:67439796-67439815 | None:intergenic | 25.0% |
!!! | TCGTTTTATTCAAGTTTGAA+AGG | + | chr3_4:67440314-67440333 | Msa0516010:three_prime_UTR | 25.0% |
!! | TTTATTCAAGTTTGAAAGGA+AGG | + | chr3_4:67440318-67440337 | Msa0516010:three_prime_UTR | 25.0% |
!! | TTATTCAAGTTTGAAAGGAA+GGG | + | chr3_4:67440319-67440338 | Msa0516010:three_prime_UTR | 25.0% |
!!! | ATTTGAGTTTTTTTTCCGTA+AGG | - | chr3_4:67440412-67440431 | None:intergenic | 25.0% |
! | AAAGTTTGACTGAAAAAAAG+TGG | - | chr3_4:67438459-67438478 | None:intergenic | 25.0% |
! | GAAAAGAAAGGAAACATAAA+AGG | - | chr3_4:67438487-67438506 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | + | chr3_4:67438702-67438721 | Msa0516010:CDS | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | - | chr3_4:67438803-67438822 | None:intergenic | 25.0% |
! | CTGTAAAAGACATGTTAATA+TGG | + | chr3_4:67438845-67438864 | Msa0516010:CDS | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | + | chr3_4:67439163-67439182 | Msa0516010:intron | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | - | chr3_4:67439184-67439203 | None:intergenic | 25.0% |
! | ATGTGATTTCAAAGATAGTT+GGG | - | chr3_4:67439571-67439590 | None:intergenic | 25.0% |
! | TATGTGATTTCAAAGATAGT+TGG | - | chr3_4:67439572-67439591 | None:intergenic | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | - | chr3_4:67439644-67439663 | None:intergenic | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | - | chr3_4:67439725-67439744 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | - | chr3_4:67439796-67439815 | None:intergenic | 25.0% |
!!! | TCGTTTTATTCAAGTTTGAA+AGG | + | chr3_4:67440314-67440333 | Msa0516010:three_prime_UTR | 25.0% |
!! | TTTATTCAAGTTTGAAAGGA+AGG | + | chr3_4:67440318-67440337 | Msa0516010:three_prime_UTR | 25.0% |
!! | TTATTCAAGTTTGAAAGGAA+GGG | + | chr3_4:67440319-67440338 | Msa0516010:three_prime_UTR | 25.0% |
!!! | ATTTGAGTTTTTTTTCCGTA+AGG | - | chr3_4:67440412-67440431 | None:intergenic | 25.0% |
TTATGGGAATGGGATATAAA+GGG | - | chr3_4:67438540-67438559 | None:intergenic | 30.0% | |
! | TAAAACTAAATCAAGGGTGT+TGG | - | chr3_4:67438583-67438602 | None:intergenic | 30.0% |
GATGGCTAAAACTAAATCAA+GGG | - | chr3_4:67438589-67438608 | None:intergenic | 30.0% | |
AGATGGCTAAAACTAAATCA+AGG | - | chr3_4:67438590-67438609 | None:intergenic | 30.0% | |
TCATTCTTAATCTAGCTACA+TGG | + | chr3_4:67438665-67438684 | Msa0516010:exon | 30.0% | |
CATTCTTAATCTAGCTACAT+GGG | + | chr3_4:67438666-67438685 | Msa0516010:exon | 30.0% | |
!! | ATTTGAAAAGGCACTTGAAA+TGG | + | chr3_4:67438818-67438837 | Msa0516010:CDS | 30.0% |
CAAATTTACATACCTCTTTC+TGG | - | chr3_4:67439003-67439022 | None:intergenic | 30.0% | |
!!! | AAACTTTTTTTATACGACCC+GGG | + | chr3_4:67439164-67439183 | Msa0516010:intron | 30.0% |
AATTATATACCTTGGATGCA+CGG | - | chr3_4:67439406-67439425 | None:intergenic | 30.0% | |
! | TTTGTTTCTTGGGTTTGAAA+TGG | - | chr3_4:67439659-67439678 | None:intergenic | 30.0% |
TTCAAAAGTTGTTCATTTGG+TGG | - | chr3_4:67439722-67439741 | None:intergenic | 30.0% | |
!! | ATGATTGGTTTAGGAAATCT+AGG | - | chr3_4:67439781-67439800 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | - | chr3_4:67439790-67439809 | None:intergenic | 30.0% |
! | TCAAGTACATGGTTTTCAAA+TGG | - | chr3_4:67439809-67439828 | None:intergenic | 30.0% |
TAATCTCACTTGCCATATTT+GGG | - | chr3_4:67439928-67439947 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | - | chr3_4:67439929-67439948 | None:intergenic | 30.0% | |
ACTTTACATTGTTGCACATA+TGG | - | chr3_4:67440273-67440292 | None:intergenic | 30.0% | |
! | TATTCAAGTTTGAAAGGAAG+GGG | + | chr3_4:67440320-67440339 | Msa0516010:three_prime_UTR | 30.0% |
AGAATTGGAGACTAATTCAA+TGG | - | chr3_4:67440361-67440380 | None:intergenic | 30.0% | |
! | TAGCACAAATGTTTTCCTTA+CGG | + | chr3_4:67440394-67440413 | Msa0516010:three_prime_UTR | 30.0% |
TTATGGGAATGGGATATAAA+GGG | - | chr3_4:67438540-67438559 | None:intergenic | 30.0% | |
! | TAAAACTAAATCAAGGGTGT+TGG | - | chr3_4:67438583-67438602 | None:intergenic | 30.0% |
GATGGCTAAAACTAAATCAA+GGG | - | chr3_4:67438589-67438608 | None:intergenic | 30.0% | |
AGATGGCTAAAACTAAATCA+AGG | - | chr3_4:67438590-67438609 | None:intergenic | 30.0% | |
TCATTCTTAATCTAGCTACA+TGG | + | chr3_4:67438665-67438684 | Msa0516010:exon | 30.0% | |
CATTCTTAATCTAGCTACAT+GGG | + | chr3_4:67438666-67438685 | Msa0516010:exon | 30.0% | |
!! | ATTTGAAAAGGCACTTGAAA+TGG | + | chr3_4:67438818-67438837 | Msa0516010:CDS | 30.0% |
CAAATTTACATACCTCTTTC+TGG | - | chr3_4:67439003-67439022 | None:intergenic | 30.0% | |
!!! | AAACTTTTTTTATACGACCC+GGG | + | chr3_4:67439164-67439183 | Msa0516010:intron | 30.0% |
AATTATATACCTTGGATGCA+CGG | - | chr3_4:67439406-67439425 | None:intergenic | 30.0% | |
! | TTTGTTTCTTGGGTTTGAAA+TGG | - | chr3_4:67439659-67439678 | None:intergenic | 30.0% |
TTCAAAAGTTGTTCATTTGG+TGG | - | chr3_4:67439722-67439741 | None:intergenic | 30.0% | |
!! | ATGATTGGTTTAGGAAATCT+AGG | - | chr3_4:67439781-67439800 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | - | chr3_4:67439790-67439809 | None:intergenic | 30.0% |
! | TCAAGTACATGGTTTTCAAA+TGG | - | chr3_4:67439809-67439828 | None:intergenic | 30.0% |
TAATCTCACTTGCCATATTT+GGG | - | chr3_4:67439928-67439947 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | - | chr3_4:67439929-67439948 | None:intergenic | 30.0% | |
ACTTTACATTGTTGCACATA+TGG | - | chr3_4:67440273-67440292 | None:intergenic | 30.0% | |
! | TATTCAAGTTTGAAAGGAAG+GGG | + | chr3_4:67440320-67440339 | Msa0516010:three_prime_UTR | 30.0% |
AGAATTGGAGACTAATTCAA+TGG | - | chr3_4:67440361-67440380 | None:intergenic | 30.0% | |
! | TAGCACAAATGTTTTCCTTA+CGG | + | chr3_4:67440394-67440413 | Msa0516010:three_prime_UTR | 30.0% |
AGAAAAGAGTGGGAAAAGAA+AGG | - | chr3_4:67438499-67438518 | None:intergenic | 35.0% | |
TTTGAAGGGAAGAAAAGAGT+GGG | - | chr3_4:67438509-67438528 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAAGAAAAGAG+TGG | - | chr3_4:67438510-67438529 | None:intergenic | 35.0% |
!! | AAAGGGATGTGTGTTTTGAA+GGG | - | chr3_4:67438523-67438542 | None:intergenic | 35.0% |
!! | TAAAGGGATGTGTGTTTTGA+AGG | - | chr3_4:67438524-67438543 | None:intergenic | 35.0% |
GTTATGGGAATGGGATATAA+AGG | - | chr3_4:67438541-67438560 | None:intergenic | 35.0% | |
!! | AATCAAGGGTGTTGGAATTT+GGG | - | chr3_4:67438575-67438594 | None:intergenic | 35.0% |
!! | AAATCAAGGGTGTTGGAATT+TGG | - | chr3_4:67438576-67438595 | None:intergenic | 35.0% |
AGATAAGCTACTACAAGGAT+TGG | + | chr3_4:67438707-67438726 | Msa0516010:CDS | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | - | chr3_4:67438775-67438794 | None:intergenic | 35.0% | |
! | TTCAAGTGCCTTTTCAAATG+TGG | - | chr3_4:67438817-67438836 | None:intergenic | 35.0% |
ATCACGGTTAAAATCTCTGT+CGG | - | chr3_4:67438970-67438989 | None:intergenic | 35.0% | |
!! | AAACATATTCGAGTTGAACC+AGG | + | chr3_4:67439309-67439328 | Msa0516010:CDS | 35.0% |
GGGTATAGTTGGAGAAAATA+TGG | + | chr3_4:67439360-67439379 | Msa0516010:CDS | 35.0% | |
!! | ATCTTTGAAATCACATACCG+AGG | + | chr3_4:67439575-67439594 | Msa0516010:CDS | 35.0% |
! | GATTAGTTAATGTTGGACCA+AGG | - | chr3_4:67439637-67439656 | None:intergenic | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | - | chr3_4:67439697-67439716 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | - | chr3_4:67439698-67439717 | None:intergenic | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | - | chr3_4:67439706-67439725 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | - | chr3_4:67439820-67439839 | None:intergenic | 35.0% |
ACTTATTCCTGAATTTGCAG+GGG | - | chr3_4:67439873-67439892 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | - | chr3_4:67439874-67439893 | None:intergenic | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | - | chr3_4:67439875-67439894 | None:intergenic | 35.0% | |
! | TCCAAGTGTTTTCCCAAATA+TGG | + | chr3_4:67439913-67439932 | Msa0516010:CDS | 35.0% |
! | AGTTGTGGAATGTGAAGTTT+TGG | - | chr3_4:67440027-67440046 | None:intergenic | 35.0% |
AAGAGAAAAATCGTGAGTTG+TGG | - | chr3_4:67440042-67440061 | None:intergenic | 35.0% | |
! | TTCAACCTCTTGATTTTGCA+GGG | - | chr3_4:67440168-67440187 | None:intergenic | 35.0% |
! | ATTCAACCTCTTGATTTTGC+AGG | - | chr3_4:67440169-67440188 | None:intergenic | 35.0% |
GTACGCGTTGAAAATTGAAA+TGG | + | chr3_4:67440291-67440310 | Msa0516010:three_prime_UTR | 35.0% | |
! | ATTCAAGTTTGAAAGGAAGG+GGG | + | chr3_4:67440321-67440340 | Msa0516010:three_prime_UTR | 35.0% |
AGAAAAGAGTGGGAAAAGAA+AGG | - | chr3_4:67438499-67438518 | None:intergenic | 35.0% | |
TTTGAAGGGAAGAAAAGAGT+GGG | - | chr3_4:67438509-67438528 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAAGAAAAGAG+TGG | - | chr3_4:67438510-67438529 | None:intergenic | 35.0% |
!! | AAAGGGATGTGTGTTTTGAA+GGG | - | chr3_4:67438523-67438542 | None:intergenic | 35.0% |
!! | TAAAGGGATGTGTGTTTTGA+AGG | - | chr3_4:67438524-67438543 | None:intergenic | 35.0% |
GTTATGGGAATGGGATATAA+AGG | - | chr3_4:67438541-67438560 | None:intergenic | 35.0% | |
!! | AATCAAGGGTGTTGGAATTT+GGG | - | chr3_4:67438575-67438594 | None:intergenic | 35.0% |
!! | AAATCAAGGGTGTTGGAATT+TGG | - | chr3_4:67438576-67438595 | None:intergenic | 35.0% |
AGATAAGCTACTACAAGGAT+TGG | + | chr3_4:67438707-67438726 | Msa0516010:CDS | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | - | chr3_4:67438775-67438794 | None:intergenic | 35.0% | |
! | TTCAAGTGCCTTTTCAAATG+TGG | - | chr3_4:67438817-67438836 | None:intergenic | 35.0% |
ATCACGGTTAAAATCTCTGT+CGG | - | chr3_4:67438970-67438989 | None:intergenic | 35.0% | |
!! | AAACATATTCGAGTTGAACC+AGG | + | chr3_4:67439309-67439328 | Msa0516010:CDS | 35.0% |
GGGTATAGTTGGAGAAAATA+TGG | + | chr3_4:67439360-67439379 | Msa0516010:CDS | 35.0% | |
!! | ATCTTTGAAATCACATACCG+AGG | + | chr3_4:67439575-67439594 | Msa0516010:CDS | 35.0% |
! | GATTAGTTAATGTTGGACCA+AGG | - | chr3_4:67439637-67439656 | None:intergenic | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | - | chr3_4:67439697-67439716 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | - | chr3_4:67439698-67439717 | None:intergenic | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | - | chr3_4:67439706-67439725 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | - | chr3_4:67439820-67439839 | None:intergenic | 35.0% |
ACTTATTCCTGAATTTGCAG+GGG | - | chr3_4:67439873-67439892 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | - | chr3_4:67439874-67439893 | None:intergenic | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | - | chr3_4:67439875-67439894 | None:intergenic | 35.0% | |
! | TCCAAGTGTTTTCCCAAATA+TGG | + | chr3_4:67439913-67439932 | Msa0516010:CDS | 35.0% |
! | AGTTGTGGAATGTGAAGTTT+TGG | - | chr3_4:67440027-67440046 | None:intergenic | 35.0% |
AAGAGAAAAATCGTGAGTTG+TGG | - | chr3_4:67440042-67440061 | None:intergenic | 35.0% | |
! | TTCAACCTCTTGATTTTGCA+GGG | - | chr3_4:67440168-67440187 | None:intergenic | 35.0% |
! | ATTCAACCTCTTGATTTTGC+AGG | - | chr3_4:67440169-67440188 | None:intergenic | 35.0% |
GTACGCGTTGAAAATTGAAA+TGG | + | chr3_4:67440291-67440310 | Msa0516010:three_prime_UTR | 35.0% | |
! | ATTCAAGTTTGAAAGGAAGG+GGG | + | chr3_4:67440321-67440340 | Msa0516010:three_prime_UTR | 35.0% |
TGAAGGTGAGTTATGGGAAT+GGG | - | chr3_4:67438550-67438569 | None:intergenic | 40.0% | |
ATGAAGGTGAGTTATGGGAA+TGG | - | chr3_4:67438551-67438570 | None:intergenic | 40.0% | |
TGGGAATGAAGGTGAGTTAT+GGG | - | chr3_4:67438556-67438575 | None:intergenic | 40.0% | |
TTGGGAATGAAGGTGAGTTA+TGG | - | chr3_4:67438557-67438576 | None:intergenic | 40.0% | |
GTGTTGGAATTTGGGAATGA+AGG | - | chr3_4:67438567-67438586 | None:intergenic | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | - | chr3_4:67438920-67438939 | None:intergenic | 40.0% | |
!! | TTCTGGAAGCATTGTGATCA+CGG | - | chr3_4:67438986-67439005 | None:intergenic | 40.0% |
ATCACAATGCTTCCAGAAAG+AGG | + | chr3_4:67438988-67439007 | Msa0516010:CDS | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | + | chr3_4:67439056-67439075 | Msa0516010:intron | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | - | chr3_4:67439106-67439125 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | + | chr3_4:67439106-67439125 | Msa0516010:intron | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | + | chr3_4:67439122-67439141 | Msa0516010:intron | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | + | chr3_4:67439123-67439142 | Msa0516010:intron | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | + | chr3_4:67439283-67439302 | Msa0516010:intron | 40.0% | |
!! | TATTCGAGTTGAACCAGGAA+TGG | + | chr3_4:67439314-67439333 | Msa0516010:CDS | 40.0% |
CAACTATACCCATCATCAAG+AGG | - | chr3_4:67439351-67439370 | None:intergenic | 40.0% | |
!! | CTCTTGATGATGGGTATAGT+TGG | + | chr3_4:67439349-67439368 | Msa0516010:CDS | 40.0% |
TATGGTCAGAAAGACATCCT+TGG | + | chr3_4:67439378-67439397 | Msa0516010:CDS | 40.0% | |
! | TTTTGTGTGTGTGTATGCAG+AGG | + | chr3_4:67439473-67439492 | Msa0516010:intron | 40.0% |
TGCAGTCATAGAAACGTTCT+AGG | + | chr3_4:67439506-67439525 | Msa0516010:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | + | chr3_4:67439607-67439626 | Msa0516010:CDS | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | + | chr3_4:67439611-67439630 | Msa0516010:CDS | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | + | chr3_4:67439734-67439753 | Msa0516010:CDS | 40.0% |
TTTGCAGGGGAAACATATGA+AGG | - | chr3_4:67439860-67439879 | None:intergenic | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | + | chr3_4:67439863-67439882 | Msa0516010:CDS | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | - | chr3_4:67439911-67439930 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | - | chr3_4:67439917-67439936 | None:intergenic | 40.0% | |
AAACACACCAACTGCTTCTA+TGG | + | chr3_4:67439970-67439989 | Msa0516010:CDS | 40.0% | |
TATGACCCTGCAAAATCAAG+AGG | + | chr3_4:67440160-67440179 | Msa0516010:three_prime_UTR | 40.0% | |
TCCTAGCTACTCGTATAGTA+GGG | + | chr3_4:67440196-67440215 | Msa0516010:three_prime_UTR | 40.0% | |
CTACTCGTATAGTAGGGATA+TGG | + | chr3_4:67440202-67440221 | Msa0516010:three_prime_UTR | 40.0% | |
TGAAGGTGAGTTATGGGAAT+GGG | - | chr3_4:67438550-67438569 | None:intergenic | 40.0% | |
ATGAAGGTGAGTTATGGGAA+TGG | - | chr3_4:67438551-67438570 | None:intergenic | 40.0% | |
TGGGAATGAAGGTGAGTTAT+GGG | - | chr3_4:67438556-67438575 | None:intergenic | 40.0% | |
TTGGGAATGAAGGTGAGTTA+TGG | - | chr3_4:67438557-67438576 | None:intergenic | 40.0% | |
GTGTTGGAATTTGGGAATGA+AGG | - | chr3_4:67438567-67438586 | None:intergenic | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | - | chr3_4:67438920-67438939 | None:intergenic | 40.0% | |
!! | TTCTGGAAGCATTGTGATCA+CGG | - | chr3_4:67438986-67439005 | None:intergenic | 40.0% |
ATCACAATGCTTCCAGAAAG+AGG | + | chr3_4:67438988-67439007 | Msa0516010:CDS | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | + | chr3_4:67439056-67439075 | Msa0516010:intron | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | - | chr3_4:67439106-67439125 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | + | chr3_4:67439106-67439125 | Msa0516010:intron | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | + | chr3_4:67439122-67439141 | Msa0516010:intron | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | + | chr3_4:67439123-67439142 | Msa0516010:intron | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | + | chr3_4:67439283-67439302 | Msa0516010:intron | 40.0% | |
!! | TATTCGAGTTGAACCAGGAA+TGG | + | chr3_4:67439314-67439333 | Msa0516010:CDS | 40.0% |
CAACTATACCCATCATCAAG+AGG | - | chr3_4:67439351-67439370 | None:intergenic | 40.0% | |
!! | CTCTTGATGATGGGTATAGT+TGG | + | chr3_4:67439349-67439368 | Msa0516010:CDS | 40.0% |
TATGGTCAGAAAGACATCCT+TGG | + | chr3_4:67439378-67439397 | Msa0516010:CDS | 40.0% | |
! | TTTTGTGTGTGTGTATGCAG+AGG | + | chr3_4:67439473-67439492 | Msa0516010:intron | 40.0% |
TGCAGTCATAGAAACGTTCT+AGG | + | chr3_4:67439506-67439525 | Msa0516010:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | + | chr3_4:67439607-67439626 | Msa0516010:CDS | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | + | chr3_4:67439611-67439630 | Msa0516010:CDS | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | + | chr3_4:67439734-67439753 | Msa0516010:CDS | 40.0% |
TTTGCAGGGGAAACATATGA+AGG | - | chr3_4:67439860-67439879 | None:intergenic | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | + | chr3_4:67439863-67439882 | Msa0516010:CDS | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | - | chr3_4:67439911-67439930 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | - | chr3_4:67439917-67439936 | None:intergenic | 40.0% | |
AAACACACCAACTGCTTCTA+TGG | + | chr3_4:67439970-67439989 | Msa0516010:CDS | 40.0% | |
TATGACCCTGCAAAATCAAG+AGG | + | chr3_4:67440160-67440179 | Msa0516010:three_prime_UTR | 40.0% | |
TCCTAGCTACTCGTATAGTA+GGG | + | chr3_4:67440196-67440215 | Msa0516010:three_prime_UTR | 40.0% | |
CTACTCGTATAGTAGGGATA+TGG | + | chr3_4:67440202-67440221 | Msa0516010:three_prime_UTR | 40.0% | |
GCTACTACAAGGATTGGAGT+TGG | + | chr3_4:67438713-67438732 | Msa0516010:CDS | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | - | chr3_4:67438916-67438935 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | + | chr3_4:67439340-67439359 | Msa0516010:CDS | 45.0% |
TTGTGCATGTGTGGTTTCCT+CGG | - | chr3_4:67439595-67439614 | None:intergenic | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | - | chr3_4:67439604-67439623 | None:intergenic | 45.0% | |
GAACTCTTAGACCTGTTCGT+AGG | - | chr3_4:67439748-67439767 | None:intergenic | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | - | chr3_4:67439980-67439999 | None:intergenic | 45.0% | |
GTCCTAGCTACTCGTATAGT+AGG | + | chr3_4:67440195-67440214 | Msa0516010:three_prime_UTR | 45.0% | |
TCCCTACTATACGAGTAGCT+AGG | - | chr3_4:67440200-67440219 | None:intergenic | 45.0% | |
GCTACTACAAGGATTGGAGT+TGG | + | chr3_4:67438713-67438732 | Msa0516010:CDS | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | - | chr3_4:67438916-67438935 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | + | chr3_4:67439340-67439359 | Msa0516010:CDS | 45.0% |
TTGTGCATGTGTGGTTTCCT+CGG | - | chr3_4:67439595-67439614 | None:intergenic | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | - | chr3_4:67439604-67439623 | None:intergenic | 45.0% | |
GAACTCTTAGACCTGTTCGT+AGG | - | chr3_4:67439748-67439767 | None:intergenic | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | - | chr3_4:67439980-67439999 | None:intergenic | 45.0% | |
GTCCTAGCTACTCGTATAGT+AGG | + | chr3_4:67440195-67440214 | Msa0516010:three_prime_UTR | 45.0% | |
TCCCTACTATACGAGTAGCT+AGG | - | chr3_4:67440200-67440219 | None:intergenic | 45.0% | |
!! | ATAAATAAATATAAAAACTA+GGG | - | chr3_4:67439259-67439278 | None:intergenic | 5.0% |
!! | AATAAATAAATATAAAAACT+AGG | - | chr3_4:67439260-67439279 | None:intergenic | 5.0% |
!! | ATAAATAAATATAAAAACTA+GGG | - | chr3_4:67439259-67439278 | None:intergenic | 5.0% |
!! | AATAAATAAATATAAAAACT+AGG | - | chr3_4:67439260-67439279 | None:intergenic | 5.0% |
!! | CTGAGGCTGAAGGGTATTGT+TGG | - | chr3_4:67438884-67438903 | None:intergenic | 50.0% |
CAACAATACCCTTCAGCCTC+AGG | + | chr3_4:67438882-67438901 | Msa0516010:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | - | chr3_4:67438893-67438912 | None:intergenic | 50.0% | |
AGTTGAACCAGGAATGGCAG+TGG | + | chr3_4:67439320-67439339 | Msa0516010:CDS | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | + | chr3_4:67439339-67439358 | Msa0516010:CDS | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | - | chr3_4:67439953-67439972 | None:intergenic | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | - | chr3_4:67439956-67439975 | None:intergenic | 50.0% | |
!! | CTGAGGCTGAAGGGTATTGT+TGG | - | chr3_4:67438884-67438903 | None:intergenic | 50.0% |
CAACAATACCCTTCAGCCTC+AGG | + | chr3_4:67438882-67438901 | Msa0516010:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | - | chr3_4:67438893-67438912 | None:intergenic | 50.0% | |
AGTTGAACCAGGAATGGCAG+TGG | + | chr3_4:67439320-67439339 | Msa0516010:CDS | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | + | chr3_4:67439339-67439358 | Msa0516010:CDS | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | - | chr3_4:67439953-67439972 | None:intergenic | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | - | chr3_4:67439956-67439975 | None:intergenic | 50.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | - | chr3_4:67438894-67438913 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | - | chr3_4:67438901-67438920 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | - | chr3_4:67438939-67438958 | None:intergenic | 55.0% |
CTGTCGGAGTCTTCACTTCG+CGG | - | chr3_4:67438954-67438973 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | + | chr3_4:67439324-67439343 | Msa0516010:CDS | 55.0% | |
!! | GCTTCCAATGTGGTTGGCCT+TGG | + | chr3_4:67439617-67439636 | Msa0516010:CDS | 55.0% |
TGGACCAAGGCCAACCACAT+TGG | - | chr3_4:67439624-67439643 | None:intergenic | 55.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | - | chr3_4:67438894-67438913 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | - | chr3_4:67438901-67438920 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | - | chr3_4:67438939-67438958 | None:intergenic | 55.0% |
CTGTCGGAGTCTTCACTTCG+CGG | - | chr3_4:67438954-67438973 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | + | chr3_4:67439324-67439343 | Msa0516010:CDS | 55.0% | |
!! | GCTTCCAATGTGGTTGGCCT+TGG | + | chr3_4:67439617-67439636 | Msa0516010:CDS | 55.0% |
TGGACCAAGGCCAACCACAT+TGG | - | chr3_4:67439624-67439643 | None:intergenic | 55.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | - | chr3_4:67438936-67438955 | None:intergenic | 60.0% |
GGACCTTCCACTGCCATTCC+TGG | - | chr3_4:67439330-67439349 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | + | chr3_4:67439394-67439413 | Msa0516010:CDS | 60.0% | |
ACCTTGGATGCACGGCTCCA+AGG | - | chr3_4:67439398-67439417 | None:intergenic | 60.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | - | chr3_4:67438936-67438955 | None:intergenic | 60.0% |
GGACCTTCCACTGCCATTCC+TGG | - | chr3_4:67439330-67439349 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | + | chr3_4:67439394-67439413 | Msa0516010:CDS | 60.0% | |
ACCTTGGATGCACGGCTCCA+AGG | - | chr3_4:67439398-67439417 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 67438432 | 67440435 | 67438432 | ID=Msa0516010;Name=Msa0516010 |
chr3_4 | mRNA | 67438432 | 67440435 | 67438432 | ID=Msa0516010-mRNA-1;Parent=Msa0516010;Name=Msa0516010-mRNA-1;_AED=0.03;_eAED=0.03;_QI=252|1|1|1|1|1|3|372|342 |
chr3_4 | exon | 67438432 | 67439009 | 67438432 | ID=Msa0516010-mRNA-1:exon:17551;Parent=Msa0516010-mRNA-1 |
chr3_4 | exon | 67439284 | 67439415 | 67439284 | ID=Msa0516010-mRNA-1:exon:17552;Parent=Msa0516010-mRNA-1 |
chr3_4 | exon | 67439493 | 67440435 | 67439493 | ID=Msa0516010-mRNA-1:exon:17553;Parent=Msa0516010-mRNA-1 |
chr3_4 | five_prime_UTR | 67438432 | 67438683 | 67438432 | ID=Msa0516010-mRNA-1:five_prime_utr;Parent=Msa0516010-mRNA-1 |
chr3_4 | CDS | 67438684 | 67439009 | 67438684 | ID=Msa0516010-mRNA-1:cds;Parent=Msa0516010-mRNA-1 |
chr3_4 | CDS | 67439284 | 67439415 | 67439284 | ID=Msa0516010-mRNA-1:cds;Parent=Msa0516010-mRNA-1 |
chr3_4 | CDS | 67439493 | 67440063 | 67439493 | ID=Msa0516010-mRNA-1:cds;Parent=Msa0516010-mRNA-1 |
chr3_4 | three_prime_UTR | 67440064 | 67440435 | 67440064 | ID=Msa0516010-mRNA-1:three_prime_utr;Parent=Msa0516010-mRNA-1 |
Gene Sequence |
Protein sequence |