Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0375920 | XP_003602195.1 | 96.765 | 340 | 11 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0375920 | sp|Q8H0Y8|WRK41_ARATH | 34.758 | 351 | 167 | 11 | 3 | 336 | 7 | 312 | 3.88e-45 | 159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0375920 | B3U399 | 96.765 | 340 | 11 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
Gene ID | Type | Classification |
---|---|---|
Msa0375920 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0162680 | Msa0375920 | 0.823295 | 1.496235e-53 | -8.615850e-47 |
Msa0375920 | Msa0516010 | 0.924969 | 3.454104e-90 | -8.615850e-47 |
Msa0375920 | Msa0746340 | 0.800351 | 1.500900e-48 | -8.615850e-47 |
Msa0375920 | Msa1025750 | 0.817513 | 3.172470e-52 | -8.615850e-47 |
Msa0375920 | Msa1064510 | 0.819945 | 8.896886e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0375920 | MtrunA17_Chr3g0126391 | 96.765 | 340 | 11 | 0 | 1 | 340 | 1 | 340 | 0.0 | 685 |
Msa0375920 | MtrunA17_Chr8g0387981 | 36.785 | 367 | 182 | 15 | 7 | 340 | 12 | 361 | 5.46e-53 | 178 |
Msa0375920 | MtrunA17_Chr7g0275531 | 34.463 | 354 | 174 | 12 | 7 | 340 | 12 | 327 | 1.18e-49 | 169 |
Msa0375920 | MtrunA17_Chr8g0347251 | 35.833 | 360 | 170 | 15 | 7 | 334 | 12 | 342 | 6.28e-46 | 159 |
Msa0375920 | MtrunA17_Chr7g0244981 | 33.333 | 204 | 102 | 4 | 2 | 197 | 9 | 186 | 3.20e-26 | 105 |
Msa0375920 | MtrunA17_Chr7g0244971 | 32.487 | 197 | 97 | 5 | 7 | 194 | 15 | 184 | 3.18e-25 | 103 |
Msa0375920 | MtrunA17_Chr8g0334541 | 32.273 | 220 | 120 | 6 | 8 | 227 | 6 | 196 | 1.03e-21 | 93.2 |
Msa0375920 | MtrunA17_Chr3g0128671 | 31.797 | 217 | 116 | 9 | 13 | 221 | 23 | 215 | 8.43e-21 | 91.3 |
Msa0375920 | MtrunA17_Chr8g0350621 | 29.000 | 200 | 116 | 4 | 1 | 198 | 1 | 176 | 1.28e-20 | 89.7 |
Msa0375920 | MtrunA17_Chr2g0315371 | 31.220 | 205 | 106 | 7 | 5 | 192 | 14 | 200 | 5.64e-19 | 85.9 |
Msa0375920 | MtrunA17_Chr5g0428351 | 42.697 | 89 | 51 | 0 | 104 | 192 | 154 | 242 | 3.95e-18 | 83.6 |
Msa0375920 | MtrunA17_Chr1g0147881 | 39.706 | 136 | 55 | 8 | 84 | 200 | 207 | 334 | 9.21e-18 | 83.2 |
Msa0375920 | MtrunA17_Chr5g0431811 | 42.683 | 82 | 45 | 1 | 125 | 206 | 664 | 743 | 1.76e-17 | 84.0 |
Msa0375920 | MtrunA17_Chr2g0315361 | 31.034 | 203 | 116 | 5 | 5 | 192 | 14 | 207 | 2.93e-17 | 81.3 |
Msa0375920 | MtrunA17_Chr2g0315381 | 39.773 | 88 | 45 | 1 | 105 | 192 | 124 | 203 | 3.61e-17 | 80.9 |
Msa0375920 | MtrunA17_Chr8g0348311 | 42.105 | 95 | 50 | 2 | 134 | 225 | 156 | 248 | 1.18e-16 | 79.7 |
Msa0375920 | MtrunA17_Chr5g0401821 | 44.828 | 87 | 44 | 3 | 104 | 190 | 172 | 254 | 1.58e-16 | 78.6 |
Msa0375920 | MtrunA17_Chr8g0387501 | 51.562 | 64 | 29 | 1 | 127 | 190 | 123 | 184 | 3.29e-16 | 77.8 |
Msa0375920 | MtrunA17_Chr4g0053281 | 41.509 | 106 | 48 | 6 | 101 | 199 | 236 | 334 | 5.54e-16 | 77.8 |
Msa0375920 | MtrunA17_Chr7g0248691 | 31.217 | 189 | 121 | 4 | 103 | 284 | 124 | 310 | 1.68e-15 | 76.3 |
Msa0375920 | MtrunA17_Chr7g0270051 | 54.839 | 62 | 26 | 1 | 129 | 190 | 49 | 108 | 4.36e-15 | 74.3 |
Msa0375920 | MtrunA17_Chr1g0184691 | 54.386 | 57 | 24 | 1 | 134 | 190 | 294 | 348 | 1.32e-14 | 73.9 |
Msa0375920 | MtrunA17_Chr7g0224801 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 1.43e-14 | 70.9 |
Msa0375920 | MtrunA17_Chr7g0218081 | 47.692 | 65 | 30 | 2 | 126 | 190 | 221 | 281 | 1.48e-14 | 74.3 |
Msa0375920 | MtrunA17_Chr7g0218081 | 50.847 | 59 | 26 | 1 | 132 | 190 | 409 | 464 | 1.93e-13 | 71.2 |
Msa0375920 | MtrunA17_Chr8g0335811 | 52.542 | 59 | 25 | 1 | 132 | 190 | 153 | 208 | 1.97e-14 | 71.6 |
Msa0375920 | MtrunA17_Chr8g0383351 | 52.542 | 59 | 25 | 1 | 132 | 190 | 159 | 214 | 2.51e-14 | 71.6 |
Msa0375920 | MtrunA17_Chr4g0071521 | 36.522 | 115 | 65 | 3 | 81 | 190 | 189 | 300 | 2.88e-14 | 72.4 |
Msa0375920 | MtrunA17_Chr7g0238921 | 55.738 | 61 | 24 | 1 | 130 | 190 | 121 | 178 | 3.57e-14 | 72.4 |
Msa0375920 | MtrunA17_Chr2g0293481 | 43.689 | 103 | 50 | 4 | 134 | 231 | 268 | 367 | 3.79e-14 | 73.2 |
Msa0375920 | MtrunA17_Chr8g0379461 | 53.333 | 60 | 26 | 1 | 131 | 190 | 74 | 131 | 4.32e-14 | 71.2 |
Msa0375920 | MtrunA17_Chr2g0319961 | 38.938 | 113 | 55 | 3 | 86 | 190 | 29 | 135 | 6.80e-14 | 70.9 |
Msa0375920 | MtrunA17_Chr3g0129361 | 52.542 | 59 | 25 | 1 | 132 | 190 | 143 | 198 | 8.68e-14 | 69.7 |
Msa0375920 | MtrunA17_Chr2g0284321 | 50.000 | 66 | 28 | 2 | 128 | 190 | 27 | 90 | 1.07e-13 | 69.3 |
Msa0375920 | MtrunA17_Chr1g0202461 | 41.176 | 85 | 42 | 2 | 106 | 190 | 240 | 316 | 1.35e-13 | 71.2 |
Msa0375920 | MtrunA17_Chr7g0249311 | 53.448 | 58 | 23 | 2 | 133 | 190 | 179 | 232 | 1.62e-13 | 71.6 |
Msa0375920 | MtrunA17_Chr7g0270831 | 50.000 | 74 | 34 | 2 | 118 | 190 | 200 | 271 | 1.82e-13 | 70.9 |
Msa0375920 | MtrunA17_Chr5g0443131 | 49.206 | 63 | 27 | 2 | 132 | 192 | 156 | 215 | 3.61e-13 | 69.3 |
Msa0375920 | MtrunA17_Chr4g0042831 | 50.000 | 58 | 26 | 1 | 133 | 190 | 145 | 199 | 4.04e-13 | 69.7 |
Msa0375920 | MtrunA17_Chr4g0042831 | 47.458 | 59 | 28 | 1 | 132 | 190 | 277 | 332 | 2.99e-11 | 63.9 |
Msa0375920 | MtrunA17_Chr1g0150801 | 50.000 | 60 | 27 | 1 | 132 | 191 | 101 | 157 | 4.21e-13 | 66.6 |
Msa0375920 | MtrunA17_Chr3g0079691 | 51.667 | 60 | 25 | 2 | 131 | 190 | 278 | 333 | 5.29e-13 | 70.1 |
Msa0375920 | MtrunA17_Chr3g0079691 | 33.628 | 113 | 63 | 3 | 132 | 240 | 494 | 598 | 5.02e-12 | 67.0 |
Msa0375920 | MtrunA17_Chr7g0270191 | 50.000 | 60 | 27 | 1 | 132 | 191 | 144 | 200 | 5.96e-13 | 68.6 |
Msa0375920 | MtrunA17_Chr4g0051881 | 43.478 | 69 | 36 | 1 | 132 | 200 | 177 | 242 | 6.49e-13 | 68.9 |
Msa0375920 | MtrunA17_Chr7g0228941 | 50.877 | 57 | 26 | 1 | 134 | 190 | 53 | 107 | 7.98e-13 | 64.7 |
Msa0375920 | MtrunA17_Chr5g0418781 | 50.847 | 59 | 26 | 1 | 132 | 190 | 123 | 178 | 8.70e-13 | 67.8 |
Msa0375920 | MtrunA17_Chr1g0194481 | 50.000 | 60 | 27 | 1 | 132 | 191 | 157 | 213 | 1.06e-12 | 68.2 |
Msa0375920 | MtrunA17_Chr5g0445311 | 49.153 | 59 | 27 | 1 | 132 | 190 | 363 | 418 | 1.20e-12 | 68.6 |
Msa0375920 | MtrunA17_Chr5g0445311 | 47.059 | 68 | 30 | 3 | 125 | 190 | 190 | 253 | 2.15e-11 | 64.7 |
Msa0375920 | MtrunA17_Chr5g0418191 | 46.479 | 71 | 33 | 3 | 121 | 190 | 138 | 204 | 1.22e-12 | 68.6 |
Msa0375920 | MtrunA17_Chr5g0418191 | 49.153 | 59 | 27 | 1 | 132 | 190 | 319 | 374 | 1.97e-12 | 67.8 |
Msa0375920 | MtrunA17_Chr7g0263531 | 34.454 | 119 | 58 | 5 | 87 | 190 | 302 | 415 | 1.47e-12 | 68.2 |
Msa0375920 | MtrunA17_Chr7g0263531 | 50.000 | 60 | 26 | 2 | 131 | 190 | 187 | 242 | 7.77e-12 | 65.9 |
Msa0375920 | MtrunA17_Chr2g0294231 | 50.000 | 60 | 27 | 1 | 132 | 191 | 202 | 258 | 1.58e-12 | 67.8 |
Msa0375920 | MtrunA17_Chr2g0322391 | 52.542 | 59 | 26 | 1 | 132 | 190 | 348 | 404 | 1.69e-12 | 68.2 |
Msa0375920 | MtrunA17_Chr4g0075201 | 51.667 | 60 | 27 | 1 | 132 | 191 | 266 | 323 | 2.07e-12 | 67.8 |
Msa0375920 | MtrunA17_Chr3g0101131 | 49.153 | 59 | 27 | 1 | 132 | 190 | 414 | 469 | 2.20e-12 | 68.2 |
Msa0375920 | MtrunA17_Chr3g0101131 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 1.84e-11 | 65.1 |
Msa0375920 | MtrunA17_Chr8g0386241 | 44.068 | 59 | 30 | 1 | 132 | 190 | 102 | 157 | 3.30e-12 | 64.3 |
Msa0375920 | MtrunA17_Chr3g0139021 | 50.877 | 57 | 26 | 1 | 134 | 190 | 315 | 369 | 3.93e-12 | 66.6 |
Msa0375920 | MtrunA17_Chr2g0302391 | 34.247 | 146 | 70 | 5 | 134 | 260 | 212 | 350 | 4.75e-12 | 66.6 |
Msa0375920 | MtrunA17_Chr2g0288871 | 50.847 | 59 | 27 | 1 | 132 | 190 | 304 | 360 | 4.94e-12 | 67.0 |
Msa0375920 | MtrunA17_Chr7g0249301 | 52.542 | 59 | 24 | 2 | 132 | 190 | 61 | 115 | 6.84e-12 | 65.9 |
Msa0375920 | MtrunA17_Chr5g0432161 | 50.000 | 58 | 25 | 2 | 133 | 190 | 244 | 297 | 9.32e-12 | 65.9 |
Msa0375920 | MtrunA17_Chr5g0432161 | 49.153 | 59 | 27 | 1 | 132 | 190 | 420 | 475 | 1.99e-11 | 65.1 |
Msa0375920 | MtrunA17_Chr3g0106491 | 46.032 | 63 | 31 | 1 | 132 | 194 | 364 | 423 | 1.27e-11 | 65.5 |
Msa0375920 | MtrunA17_Chr3g0106491 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 1.36e-11 | 65.5 |
Msa0375920 | MtrunA17_Chr7g0243891 | 50.000 | 58 | 25 | 2 | 133 | 190 | 216 | 269 | 1.46e-11 | 65.5 |
Msa0375920 | MtrunA17_Chr4g0004911 | 40.909 | 88 | 48 | 2 | 104 | 190 | 306 | 390 | 1.53e-11 | 65.1 |
Msa0375920 | MtrunA17_Chr4g0004911 | 46.552 | 58 | 28 | 2 | 133 | 190 | 184 | 238 | 5.28e-11 | 63.5 |
Msa0375920 | MtrunA17_Chr1g0150281 | 50.877 | 57 | 26 | 1 | 134 | 190 | 141 | 195 | 1.64e-11 | 63.9 |
Msa0375920 | MtrunA17_Chr4g0068541 | 47.458 | 59 | 28 | 1 | 132 | 190 | 207 | 262 | 1.97e-11 | 64.7 |
Msa0375920 | MtrunA17_Chr7g0216891 | 43.243 | 74 | 39 | 2 | 118 | 190 | 203 | 274 | 6.03e-11 | 63.5 |
Msa0375920 | MtrunA17_Chr1g0150271 | 32.381 | 105 | 66 | 2 | 132 | 236 | 100 | 199 | 6.23e-11 | 62.0 |
Msa0375920 | MtrunA17_Chr5g0447701 | 45.902 | 61 | 30 | 1 | 130 | 190 | 249 | 306 | 7.03e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0375920 | AT4G11070.1 | 34.758 | 351 | 167 | 11 | 3 | 336 | 7 | 312 | 3.94e-46 | 159 |
Msa0375920 | AT4G23810.1 | 35.316 | 269 | 138 | 8 | 3 | 248 | 10 | 265 | 1.77e-45 | 158 |
Msa0375920 | AT5G24110.1 | 40.179 | 224 | 98 | 7 | 5 | 223 | 14 | 206 | 1.70e-42 | 149 |
Msa0375920 | AT4G11070.2 | 32.353 | 340 | 158 | 10 | 3 | 336 | 7 | 280 | 9.81e-40 | 142 |
Msa0375920 | AT2G46400.1 | 30.631 | 333 | 162 | 12 | 1 | 319 | 2 | 279 | 7.78e-32 | 121 |
Msa0375920 | AT2G40750.1 | 32.301 | 226 | 116 | 9 | 5 | 207 | 13 | 224 | 2.18e-25 | 105 |
Msa0375920 | AT3G56400.1 | 33.333 | 186 | 107 | 3 | 7 | 192 | 11 | 179 | 3.86e-24 | 100 |
Msa0375920 | AT2G40740.1 | 59.677 | 62 | 25 | 0 | 131 | 192 | 171 | 232 | 4.33e-22 | 94.7 |
Msa0375920 | AT2G40740.3 | 59.677 | 62 | 25 | 0 | 131 | 192 | 180 | 241 | 5.62e-22 | 94.7 |
Msa0375920 | AT5G01900.1 | 29.268 | 205 | 120 | 5 | 8 | 211 | 9 | 189 | 2.52e-17 | 80.9 |
Msa0375920 | AT1G66550.1 | 28.125 | 192 | 97 | 4 | 8 | 192 | 10 | 167 | 1.10e-16 | 79.0 |
Msa0375920 | AT5G45260.1 | 59.649 | 57 | 23 | 0 | 134 | 190 | 1209 | 1265 | 1.30e-16 | 81.6 |
Msa0375920 | AT1G66550.2 | 28.649 | 185 | 100 | 3 | 8 | 192 | 10 | 162 | 5.15e-16 | 77.0 |
Msa0375920 | AT2G23320.1 | 46.667 | 90 | 38 | 5 | 104 | 190 | 213 | 295 | 5.59e-16 | 78.2 |
Msa0375920 | AT1G66600.1 | 29.557 | 203 | 104 | 5 | 8 | 205 | 10 | 178 | 5.93e-16 | 76.6 |
Msa0375920 | AT1G64000.1 | 40.777 | 103 | 50 | 4 | 104 | 203 | 89 | 183 | 5.94e-16 | 75.9 |
Msa0375920 | AT5G52830.1 | 48.837 | 86 | 36 | 2 | 106 | 191 | 144 | 221 | 7.39e-16 | 77.8 |
Msa0375920 | AT4G31550.1 | 57.895 | 57 | 22 | 1 | 134 | 190 | 247 | 301 | 1.19e-15 | 77.0 |
Msa0375920 | AT4G31550.2 | 57.895 | 57 | 22 | 1 | 134 | 190 | 246 | 300 | 1.22e-15 | 77.0 |
Msa0375920 | AT5G49520.1 | 53.333 | 60 | 25 | 1 | 132 | 191 | 220 | 276 | 1.40e-15 | 77.4 |
Msa0375920 | AT5G41570.1 | 47.297 | 74 | 34 | 2 | 132 | 203 | 97 | 167 | 1.64e-15 | 73.9 |
Msa0375920 | AT4G24240.1 | 40.187 | 107 | 60 | 3 | 84 | 190 | 234 | 336 | 1.74e-15 | 77.0 |
Msa0375920 | AT4G01250.1 | 33.577 | 137 | 70 | 4 | 126 | 261 | 121 | 237 | 2.25e-15 | 75.9 |
Msa0375920 | AT2G46130.1 | 45.946 | 74 | 35 | 2 | 132 | 203 | 29 | 99 | 3.00e-15 | 71.2 |
Msa0375920 | AT1G29280.1 | 55.000 | 60 | 25 | 1 | 131 | 190 | 72 | 129 | 4.12e-15 | 74.7 |
Msa0375920 | AT2G30590.1 | 44.681 | 94 | 41 | 5 | 100 | 190 | 283 | 368 | 4.57e-15 | 75.9 |
Msa0375920 | AT5G07100.2 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 5.97e-15 | 73.6 |
Msa0375920 | AT5G07100.2 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.11e-11 | 63.9 |
Msa0375920 | AT5G07100.4 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 5.97e-15 | 73.6 |
Msa0375920 | AT5G07100.4 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.11e-11 | 63.9 |
Msa0375920 | AT5G07100.5 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 5.97e-15 | 73.6 |
Msa0375920 | AT5G07100.5 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.11e-11 | 63.9 |
Msa0375920 | AT5G07100.3 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 5.97e-15 | 73.6 |
Msa0375920 | AT5G07100.3 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.11e-11 | 63.9 |
Msa0375920 | AT5G07100.1 | 41.414 | 99 | 49 | 3 | 111 | 203 | 206 | 301 | 6.92e-15 | 74.7 |
Msa0375920 | AT5G07100.1 | 46.552 | 58 | 28 | 1 | 133 | 190 | 117 | 171 | 9.98e-12 | 65.5 |
Msa0375920 | AT2G03340.1 | 33.548 | 155 | 85 | 7 | 45 | 190 | 158 | 303 | 1.06e-14 | 75.5 |
Msa0375920 | AT2G03340.1 | 38.202 | 89 | 52 | 1 | 132 | 220 | 414 | 499 | 5.98e-12 | 67.0 |
Msa0375920 | AT4G26440.1 | 53.846 | 65 | 26 | 2 | 126 | 190 | 171 | 231 | 1.54e-14 | 75.1 |
Msa0375920 | AT4G26440.1 | 47.619 | 63 | 30 | 1 | 132 | 194 | 371 | 430 | 1.48e-11 | 65.9 |
Msa0375920 | AT4G23550.1 | 50.000 | 70 | 33 | 1 | 121 | 190 | 128 | 195 | 1.95e-14 | 73.6 |
Msa0375920 | AT5G28650.1 | 40.179 | 112 | 54 | 3 | 79 | 190 | 219 | 317 | 2.19e-14 | 73.6 |
Msa0375920 | AT2G44745.1 | 52.542 | 59 | 25 | 1 | 132 | 190 | 144 | 199 | 2.29e-14 | 71.6 |
Msa0375920 | AT5G22570.1 | 46.154 | 65 | 35 | 0 | 134 | 198 | 111 | 175 | 8.44e-14 | 71.2 |
Msa0375920 | AT2G24570.1 | 54.386 | 57 | 24 | 1 | 134 | 190 | 244 | 298 | 1.09e-13 | 71.2 |
Msa0375920 | AT3G04670.1 | 54.386 | 57 | 24 | 1 | 134 | 190 | 263 | 317 | 1.17e-13 | 71.2 |
Msa0375920 | AT3G58710.1 | 55.000 | 60 | 25 | 1 | 131 | 190 | 69 | 126 | 1.38e-13 | 70.5 |
Msa0375920 | AT3G58710.2 | 55.000 | 60 | 25 | 1 | 131 | 190 | 68 | 125 | 1.39e-13 | 70.5 |
Msa0375920 | AT1G13960.1 | 42.169 | 83 | 43 | 3 | 108 | 190 | 205 | 282 | 1.72e-13 | 71.6 |
Msa0375920 | AT1G13960.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 408 | 463 | 1.78e-12 | 68.6 |
Msa0375920 | AT5G26170.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 112 | 167 | 1.84e-13 | 68.2 |
Msa0375920 | AT2G34830.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 216 | 270 | 2.07e-13 | 71.2 |
Msa0375920 | AT2G34830.2 | 56.140 | 57 | 23 | 1 | 134 | 190 | 225 | 279 | 2.16e-13 | 71.2 |
Msa0375920 | AT2G37260.3 | 46.377 | 69 | 34 | 1 | 122 | 190 | 258 | 323 | 2.51e-13 | 70.5 |
Msa0375920 | AT2G37260.1 | 46.377 | 69 | 34 | 1 | 122 | 190 | 338 | 403 | 2.53e-13 | 70.9 |
Msa0375920 | AT2G37260.2 | 46.377 | 69 | 34 | 1 | 122 | 190 | 256 | 321 | 2.60e-13 | 70.5 |
Msa0375920 | AT3G01080.3 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 2.87e-13 | 70.1 |
Msa0375920 | AT1G13960.2 | 42.169 | 83 | 43 | 3 | 108 | 190 | 52 | 129 | 2.89e-13 | 70.5 |
Msa0375920 | AT1G13960.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 255 | 310 | 2.12e-12 | 67.8 |
Msa0375920 | AT4G04450.2 | 44.681 | 94 | 47 | 3 | 100 | 190 | 162 | 253 | 3.34e-13 | 70.5 |
Msa0375920 | AT4G18170.1 | 44.928 | 69 | 35 | 1 | 132 | 200 | 171 | 236 | 3.85e-13 | 69.7 |
Msa0375920 | AT1G29860.1 | 46.377 | 69 | 34 | 1 | 132 | 200 | 135 | 200 | 4.13e-13 | 69.3 |
Msa0375920 | AT3G01080.2 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 5.17e-13 | 70.1 |
Msa0375920 | AT3G01080.2 | 39.560 | 91 | 47 | 2 | 105 | 190 | 311 | 398 | 4.58e-12 | 67.0 |
Msa0375920 | AT3G01080.1 | 53.333 | 60 | 24 | 2 | 131 | 190 | 165 | 220 | 5.82e-13 | 69.7 |
Msa0375920 | AT3G01080.1 | 39.560 | 91 | 47 | 2 | 105 | 190 | 273 | 360 | 4.87e-12 | 67.0 |
Msa0375920 | AT1G80590.1 | 43.939 | 66 | 37 | 0 | 134 | 199 | 86 | 151 | 8.01e-13 | 67.8 |
Msa0375920 | AT4G04450.1 | 48.649 | 74 | 35 | 2 | 118 | 190 | 276 | 347 | 8.09e-13 | 69.7 |
Msa0375920 | AT1G66560.1 | 45.000 | 60 | 33 | 0 | 133 | 192 | 103 | 162 | 8.67e-13 | 67.8 |
Msa0375920 | AT1G69310.4 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 9.41e-13 | 68.2 |
Msa0375920 | AT1G69310.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 9.41e-13 | 68.2 |
Msa0375920 | AT1G69310.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 9.41e-13 | 68.2 |
Msa0375920 | AT1G30650.1 | 56.140 | 57 | 23 | 1 | 134 | 190 | 218 | 272 | 1.41e-12 | 68.6 |
Msa0375920 | AT5G56270.1 | 49.231 | 65 | 29 | 2 | 126 | 190 | 266 | 326 | 2.59e-12 | 68.2 |
Msa0375920 | AT2G25000.2 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.63e-12 | 65.9 |
Msa0375920 | AT2G25000.4 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.63e-12 | 65.9 |
Msa0375920 | AT1G62300.1 | 47.297 | 74 | 36 | 2 | 118 | 190 | 296 | 367 | 2.66e-12 | 68.2 |
Msa0375920 | AT2G04880.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 282 | 337 | 3.00e-12 | 67.8 |
Msa0375920 | AT4G01720.1 | 52.542 | 59 | 26 | 1 | 132 | 190 | 238 | 294 | 3.03e-12 | 67.8 |
Msa0375920 | AT4G26640.7 | 49.153 | 59 | 27 | 1 | 132 | 190 | 340 | 395 | 3.16e-12 | 67.8 |
Msa0375920 | AT4G26640.7 | 50.000 | 58 | 25 | 2 | 133 | 190 | 171 | 224 | 7.88e-11 | 63.5 |
Msa0375920 | AT2G25000.3 | 50.000 | 62 | 29 | 1 | 132 | 193 | 124 | 183 | 3.30e-12 | 66.2 |
Msa0375920 | AT3G01970.1 | 50.000 | 60 | 27 | 1 | 132 | 191 | 64 | 120 | 3.67e-12 | 63.9 |
Msa0375920 | AT2G25000.1 | 50.000 | 62 | 29 | 1 | 132 | 193 | 145 | 204 | 3.71e-12 | 66.2 |
Msa0375920 | AT4G26640.2 | 49.153 | 59 | 27 | 1 | 132 | 190 | 380 | 435 | 3.94e-12 | 67.4 |
Msa0375920 | AT4G26640.2 | 50.000 | 58 | 25 | 2 | 133 | 190 | 211 | 264 | 9.03e-11 | 63.5 |
Msa0375920 | AT4G26640.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 308 | 363 | 4.06e-12 | 67.4 |
Msa0375920 | AT2G04880.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 306 | 361 | 4.19e-12 | 67.4 |
Msa0375920 | AT4G26640.5 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 4.90e-12 | 67.0 |
Msa0375920 | AT4G26640.6 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 4.90e-12 | 67.0 |
Msa0375920 | AT4G26640.4 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 4.90e-12 | 67.0 |
Msa0375920 | AT4G26640.3 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 4.90e-12 | 67.0 |
Msa0375920 | AT5G13080.1 | 50.000 | 60 | 27 | 1 | 132 | 191 | 66 | 122 | 5.86e-12 | 63.2 |
Msa0375920 | AT4G39410.1 | 49.153 | 59 | 27 | 1 | 132 | 190 | 222 | 277 | 6.27e-12 | 65.9 |
Msa0375920 | AT5G46350.1 | 43.939 | 66 | 34 | 1 | 132 | 197 | 182 | 244 | 7.70e-12 | 65.9 |
Msa0375920 | AT4G22070.4 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 9.44e-12 | 66.2 |
Msa0375920 | AT4G22070.3 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 9.44e-12 | 66.2 |
Msa0375920 | AT4G22070.2 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 9.44e-12 | 66.2 |
Msa0375920 | AT4G22070.1 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 9.44e-12 | 66.2 |
Msa0375920 | AT2G47260.1 | 48.333 | 60 | 28 | 1 | 132 | 191 | 173 | 229 | 1.22e-11 | 65.5 |
Msa0375920 | AT3G62340.1 | 50.000 | 60 | 27 | 1 | 132 | 191 | 117 | 173 | 1.40e-11 | 64.7 |
Msa0375920 | AT5G64810.1 | 41.791 | 67 | 36 | 1 | 132 | 198 | 109 | 172 | 1.45e-11 | 63.2 |
Msa0375920 | AT2G38470.1 | 47.458 | 59 | 28 | 1 | 132 | 190 | 361 | 416 | 2.51e-11 | 65.1 |
Msa0375920 | AT2G38470.1 | 50.000 | 58 | 25 | 2 | 133 | 190 | 184 | 237 | 9.98e-11 | 63.2 |
Msa0375920 | AT5G43290.1 | 49.180 | 61 | 28 | 1 | 130 | 190 | 111 | 168 | 2.83e-11 | 63.5 |
Msa0375920 | AT1G68150.1 | 44.304 | 79 | 39 | 3 | 132 | 207 | 234 | 310 | 3.41e-11 | 64.3 |
Msa0375920 | AT4G12020.10 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 5.74e-11 | 64.3 |
Msa0375920 | AT4G12020.3 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 5.90e-11 | 64.3 |
Msa0375920 | AT4G12020.1 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.30e-11 | 64.3 |
Msa0375920 | AT4G12020.9 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.30e-11 | 64.3 |
Msa0375920 | AT4G12020.6 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.40e-11 | 64.3 |
Msa0375920 | AT4G12020.8 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.40e-11 | 64.3 |
Msa0375920 | AT4G12020.7 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.53e-11 | 64.3 |
Msa0375920 | AT4G12020.2 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.63e-11 | 64.3 |
Msa0375920 | AT4G12020.4 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.69e-11 | 64.3 |
Msa0375920 | AT2G40740.2 | 57.500 | 40 | 17 | 0 | 153 | 192 | 149 | 188 | 7.13e-11 | 62.0 |
Msa0375920 | AT4G12020.5 | 37.079 | 89 | 51 | 3 | 102 | 190 | 371 | 454 | 7.68e-11 | 63.9 |
Msa0375920 | AT4G12020.11 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 9.91e-11 | 63.5 |
Msa0375920 | AT5G15130.2 | 48.333 | 60 | 29 | 1 | 132 | 191 | 184 | 241 | 1.00e-10 | 63.2 |
Find 104 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATCTCACTTGCCATATT+TGG | 0.088426 | 3_1:+75882646 | None:intergenic |
AAATCAAGGGTGTTGGAATT+TGG | 0.120759 | 3_1:+75883994 | None:intergenic |
CAAATTTACATACCTCTTTC+TGG | 0.143241 | 3_1:+75883567 | None:intergenic |
CCGTAAAAGACATGTTAATA+TGG | 0.191166 | 3_1:-75883722 | Msa0375920:CDS |
TTTGATCAATTTGAATTTGA+TGG | 0.254177 | 3_1:-75882571 | Msa0375920:CDS |
TGTTAACAATATTTGTTTCT+TGG | 0.254224 | 3_1:+75882905 | None:intergenic |
TATGTTTCCCCTGCAAATTC+AGG | 0.272093 | 3_1:-75882709 | Msa0375920:CDS |
AATCAAGGGTGTTGGAATTT+GGG | 0.292479 | 3_1:+75883995 | None:intergenic |
ATGGAACAAATGATTGGTTT+AGG | 0.306745 | 3_1:+75882785 | None:intergenic |
AAACACACCAACTGCTTCTA+TGG | 0.316690 | 3_1:-75882602 | Msa0375920:CDS |
TGGGAATGAAGGTGAGTTAT+GGG | 0.317021 | 3_1:+75884014 | None:intergenic |
AATCTCACGTGTTTCATTAG+AGG | 0.318717 | 3_1:+75883795 | None:intergenic |
GTTAACAATATTTGTTTCTT+GGG | 0.321184 | 3_1:+75882906 | None:intergenic |
ATGATTGGTTTAGGAAATCT+AGG | 0.323422 | 3_1:+75882794 | None:intergenic |
GTTATGGGAATGGGATATAA+AGG | 0.328464 | 3_1:+75884029 | None:intergenic |
GGACCTTCCACTGCCATTCC+TGG | 0.341337 | 3_1:+75883239 | None:intergenic |
TGACTTATTCCTGAATTTGC+AGG | 0.343271 | 3_1:+75882700 | None:intergenic |
GGAACACTCTAGCAATTAGA+TGG | 0.350756 | 3_1:-75883283 | Msa0375920:CDS |
TAATCTCACTTGCCATATTT+GGG | 0.350967 | 3_1:+75882647 | None:intergenic |
ACTTTACATTGTTGCACATA+TGG | 0.353263 | 3_1:+75882302 | None:intergenic |
TTTGTTTCTTGGGTTTGAAA+TGG | 0.354628 | 3_1:+75882916 | None:intergenic |
TTTCAAATGGAACAAATGAT+TGG | 0.363750 | 3_1:+75882779 | None:intergenic |
GGGTATAGTTGGAGAAAATA+TGG | 0.366566 | 3_1:-75883206 | Msa0375920:CDS |
ATTTGAAAAGGCACTTGAAA+TGG | 0.370230 | 3_1:-75883749 | Msa0375920:CDS |
GTCCTAGCTACTCGTATAGT+AGG | 0.387154 | 3_1:-75882377 | Msa0375920:three_prime_UTR |
GAAAAGAAAGGAAACATAAA+AGG | 0.388092 | 3_1:+75884083 | None:intergenic |
CTACTCGTATAGTAGGGATA+TGG | 0.390947 | 3_1:-75882370 | Msa0375920:three_prime_UTR |
TCAAATTCAAATTGATCAAA+TGG | 0.396441 | 3_1:+75882574 | None:intergenic |
TTGGGAATGAAGGTGAGTTA+TGG | 0.406264 | 3_1:+75884013 | None:intergenic |
TTCAAAAGTTGTTCATTTGG+TGG | 0.409814 | 3_1:+75882853 | None:intergenic |
CAAAGCTACTTTCAAGTACA+TGG | 0.413007 | 3_1:+75882755 | None:intergenic |
TTGTTCAAAAGTTGTTCATT+TGG | 0.416222 | 3_1:+75882850 | None:intergenic |
TGCAGTCATAGAAACGTTCT+AGG | 0.419203 | 3_1:-75883060 | Msa0375920:CDS |
TATTTAATTTGATATAGAAT+TGG | 0.427437 | 3_1:+75882199 | None:intergenic |
TGAAGGTGAGTTATGGGAAT+GGG | 0.427675 | 3_1:+75884020 | None:intergenic |
TATTCAAGTTTGAAAGGAAA+GGG | 0.434265 | 3_1:-75882252 | Msa0375920:three_prime_UTR |
AGTTGTGGAATGTGAAGTTT+TGG | 0.442534 | 3_1:+75882548 | None:intergenic |
CTGAGGCTGAAGGGTATTGT+TGG | 0.449383 | 3_1:+75883686 | None:intergenic |
CGTAAAAGACATGTTAATAT+GGG | 0.457646 | 3_1:-75883721 | Msa0375920:CDS |
TGAAATGGATTAGTTAATGT+TGG | 0.458156 | 3_1:+75882931 | None:intergenic |
AGAATTGGAGACTAATTCAA+TGG | 0.460511 | 3_1:+75882214 | None:intergenic |
CTCTTGATGATGGGTATAGT+TGG | 0.464883 | 3_1:-75883217 | Msa0375920:CDS |
AAGGTGGCGAATCTGATATT+CGG | 0.465518 | 3_1:+75883650 | None:intergenic |
TTTGTTGATCAAGGCTTTGA+GGG | 0.467796 | 3_1:+75882878 | None:intergenic |
TTTGGGAAAACACTTGGAGT+TGG | 0.470835 | 3_1:+75882664 | None:intergenic |
TTATGGGAATGGGATATAAA+GGG | 0.471676 | 3_1:+75884030 | None:intergenic |
AGATGGCTAAAACTAAATCA+AGG | 0.477564 | 3_1:+75883980 | None:intergenic |
AATTATATCCACATTTGAAA+AGG | 0.478087 | 3_1:-75883761 | Msa0375920:CDS |
AGATAAGCTACTACAAGGAT+TGG | 0.478321 | 3_1:-75883860 | Msa0375920:CDS |
AGAAAAGAGTGGGAAAAGAA+AGG | 0.480690 | 3_1:+75884071 | None:intergenic |
GTGGAAGGTCCTCTTGATGA+TGG | 0.481430 | 3_1:-75883227 | Msa0375920:CDS |
GTGTTGGAATTTGGGAATGA+AGG | 0.483928 | 3_1:+75884003 | None:intergenic |
GTACGCGTTGAAAATTGAAA+TGG | 0.486419 | 3_1:-75882281 | Msa0375920:three_prime_UTR |
TTCTGGAAGCATTGTGATCA+CGG | 0.489343 | 3_1:+75883584 | None:intergenic |
TATGTGATTTCAAAGATAGC+TGG | 0.490454 | 3_1:+75882997 | None:intergenic |
CAACAATACCCTTCAGCCTC+AGG | 0.495514 | 3_1:-75883685 | Msa0375920:CDS |
GCCATATTTGGGAAAACACT+TGG | 0.500966 | 3_1:+75882658 | None:intergenic |
ATCACAATGCTTCCAGAAAG+AGG | 0.506811 | 3_1:-75883579 | Msa0375920:intron |
GACTTATTCCTGAATTTGCA+GGG | 0.514420 | 3_1:+75882701 | None:intergenic |
ACCTTGGATGCACGGCTCCA+AGG | 0.515275 | 3_1:+75883171 | None:intergenic |
TCCTTGGAGCCGTGCATCCA+AGG | 0.519224 | 3_1:-75883172 | Msa0375920:intron |
TAAAACTAAATCAAGGGTGT+TGG | 0.523625 | 3_1:+75883987 | None:intergenic |
CTGTCGGAGTCTTCACTTCG+CGG | 0.524147 | 3_1:+75883616 | None:intergenic |
GCCTAAAATTAATTAAAAGA+TGG | 0.524599 | 3_1:+75883963 | None:intergenic |
TTGTGCATGTGTGGTTTCCT+CGG | 0.524687 | 3_1:+75882974 | None:intergenic |
TCATTCTTAATCTAGCTACA+TGG | 0.525627 | 3_1:-75883902 | Msa0375920:exon |
TATGGTCAGAAAGACATCCT+TGG | 0.530226 | 3_1:-75883188 | Msa0375920:CDS |
TTATTCAAGTTTGAAAGGAA+AGG | 0.531393 | 3_1:-75882253 | Msa0375920:three_prime_UTR |
GCAAGTGTTCCTGAGGCTGA+AGG | 0.534387 | 3_1:+75883676 | None:intergenic |
GTGTTTGCAGCAGAAGTAGC+TGG | 0.543085 | 3_1:+75882619 | None:intergenic |
CATTCTTAATCTAGCTACAT+GGG | 0.568962 | 3_1:-75883901 | Msa0375920:exon |
TCCTAGCTACTCGTATAGTA+GGG | 0.569064 | 3_1:-75882376 | Msa0375920:three_prime_UTR |
CAAGTGTTCCTGAGGCTGAA+GGG | 0.573717 | 3_1:+75883677 | None:intergenic |
GCTACTACAAGGATTGGAGT+TGG | 0.576309 | 3_1:-75883854 | Msa0375920:CDS |
AATTATATACCTTGGATGCA+CGG | 0.579367 | 3_1:+75883163 | None:intergenic |
GATGGCTAAAACTAAATCAA+GGG | 0.581914 | 3_1:+75883981 | None:intergenic |
TGGAAGGTCCTCTTGATGAT+GGG | 0.583275 | 3_1:-75883226 | Msa0375920:CDS |
TATGACCCTGCAAAATCAAG+AGG | 0.585700 | 3_1:-75882412 | Msa0375920:three_prime_UTR |
ATGTGATTTCAAAGATAGCT+GGG | 0.585905 | 3_1:+75882998 | None:intergenic |
TATTCGAGTTGAACCAGGAA+TGG | 0.589228 | 3_1:-75883252 | Msa0375920:CDS |
AGTTGAACCAGGAATGGCAG+TGG | 0.591297 | 3_1:-75883246 | Msa0375920:CDS |
ATTCAAGTTTGAAAGGAAAG+GGG | 0.593090 | 3_1:-75882251 | Msa0375920:three_prime_UTR |
TTTGCAGGGGAAACATATGA+AGG | 0.596062 | 3_1:+75882715 | None:intergenic |
ATCACGGTTAAAATCTCTGT+CGG | 0.596477 | 3_1:+75883600 | None:intergenic |
GAACCAGGAATGGCAGTGGA+AGG | 0.596663 | 3_1:-75883242 | Msa0375920:CDS |
TTTGAAGGGAAGAAAAGAGT+GGG | 0.608256 | 3_1:+75884061 | None:intergenic |
TTAATAGATAAGCTACTACA+AGG | 0.612960 | 3_1:-75883865 | Msa0375920:CDS |
ATGAAGGTGAGTTATGGGAA+TGG | 0.613244 | 3_1:+75884019 | None:intergenic |
AAACATATTCGAGTTGAACC+AGG | 0.613692 | 3_1:-75883257 | Msa0375920:CDS |
GAACTCTTAGACCTGTTCGT+AGG | 0.617613 | 3_1:+75882827 | None:intergenic |
CTTCGCGGACTACAGCTCAA+AGG | 0.617709 | 3_1:+75883631 | None:intergenic |
TAATGTTGGACCAACCACAT+TGG | 0.618042 | 3_1:+75882945 | None:intergenic |
CAACTATACCCATCATCAAG+AGG | 0.622097 | 3_1:+75883218 | None:intergenic |
GGAAACTCCATAGAAGCAGT+TGG | 0.622336 | 3_1:+75882595 | None:intergenic |
TGGAAGCAATTGTGCATGTG+TGG | 0.623042 | 3_1:+75882965 | None:intergenic |
ACAATTGCTTCCAATGTGGT+TGG | 0.627124 | 3_1:-75882955 | Msa0375920:CDS |
TGGCGAATCTGATATTCGGA+TGG | 0.634201 | 3_1:+75883654 | None:intergenic |
ATCTTTGAAATCACATACCG+AGG | 0.641820 | 3_1:-75882991 | Msa0375920:CDS |
CGCGGACTACAGCTCAAAGG+TGG | 0.645554 | 3_1:+75883634 | None:intergenic |
TCGGATGGCAAGTGTTCCTG+AGG | 0.646934 | 3_1:+75883669 | None:intergenic |
TCCCTACTATACGAGTAGCT+AGG | 0.650581 | 3_1:+75882375 | None:intergenic |
ACTTATTCCTGAATTTGCAG+GGG | 0.668793 | 3_1:+75882702 | None:intergenic |
ATGCACAATTGCTTCCAATG+TGG | 0.717502 | 3_1:-75882959 | Msa0375920:CDS |
TTTGCAGCAGAAGTAGCTGG+TGG | 0.728180 | 3_1:+75882622 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATATTTATTTATTTT+AGG | - | chr3_1:75882990-75883009 | Msa0375920:CDS | 0.0% |
!!! | TTTTTATATTTATTTATTTT+AGG | - | chr3_1:75882990-75883009 | Msa0375920:CDS | 0.0% |
!!! | ATATTTTGATGATTTTTTTT+AGG | - | chr3_1:75883816-75883835 | Msa0375920:CDS | 10.0% |
!!! | TATTTAATTTGATATAGAAT+TGG | + | chr3_1:75884098-75884117 | None:intergenic | 10.0% |
!!! | ATATTTTGATGATTTTTTTT+AGG | - | chr3_1:75883816-75883835 | Msa0375920:CDS | 10.0% |
!!! | TATTTAATTTGATATAGAAT+TGG | + | chr3_1:75884098-75884117 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTAATACCGTA+GGG | - | chr3_1:75882816-75882835 | Msa0375920:CDS | 15.0% |
!!! | TTTTTTTTTTTAATACCGTA+GGG | - | chr3_1:75882816-75882835 | Msa0375920:CDS | 15.0% |
!!! | GCCATCTTTTAATTAATTTT+AGG | - | chr3_1:75882330-75882349 | Msa0375920:three_prime_UTR | 20.0% |
!! | GCCTAAAATTAATTAAAAGA+TGG | + | chr3_1:75882334-75882353 | None:intergenic | 20.0% |
!! | AGTTAAAAAAATGCTAAACA+AGG | + | chr3_1:75882356-75882375 | None:intergenic | 20.0% |
!! | AATTATATCCACATTTGAAA+AGG | - | chr3_1:75882533-75882552 | Msa0375920:CDS | 20.0% |
!!! | GTTTTTTTTTTTAATACCGT+AGG | - | chr3_1:75882815-75882834 | Msa0375920:CDS | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | + | chr3_1:75882913-75882932 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | + | chr3_1:75882982-75883001 | None:intergenic | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | + | chr3_1:75883142-75883161 | None:intergenic | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | + | chr3_1:75883391-75883410 | None:intergenic | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | + | chr3_1:75883392-75883411 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | + | chr3_1:75883723-75883742 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | - | chr3_1:75883723-75883742 | Msa0375920:CDS | 20.0% |
!!! | GCCATCTTTTAATTAATTTT+AGG | - | chr3_1:75882330-75882349 | Msa0375920:three_prime_UTR | 20.0% |
!! | GCCTAAAATTAATTAAAAGA+TGG | + | chr3_1:75882334-75882353 | None:intergenic | 20.0% |
!! | AGTTAAAAAAATGCTAAACA+AGG | + | chr3_1:75882356-75882375 | None:intergenic | 20.0% |
!! | AATTATATCCACATTTGAAA+AGG | - | chr3_1:75882533-75882552 | Msa0375920:CDS | 20.0% |
!!! | GTTTTTTTTTTTAATACCGT+AGG | - | chr3_1:75882815-75882834 | Msa0375920:CDS | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | + | chr3_1:75882913-75882932 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | + | chr3_1:75882982-75883001 | None:intergenic | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | + | chr3_1:75883142-75883161 | None:intergenic | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | + | chr3_1:75883391-75883410 | None:intergenic | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | + | chr3_1:75883392-75883411 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | + | chr3_1:75883723-75883742 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | - | chr3_1:75883723-75883742 | Msa0375920:CDS | 20.0% |
! | AAAGTTTGACTGAAAAAAAG+TGG | + | chr3_1:75882186-75882205 | None:intergenic | 25.0% |
! | GAAAAGAAAGGAAACATAAA+AGG | + | chr3_1:75882214-75882233 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | - | chr3_1:75882429-75882448 | Msa0375920:three_prime_UTR | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | + | chr3_1:75882530-75882549 | None:intergenic | 25.0% |
!! | CCATATTAACATGTCTTTTA+CGG | + | chr3_1:75882575-75882594 | None:intergenic | 25.0% |
! | CGTAAAAGACATGTTAATAT+GGG | - | chr3_1:75882573-75882592 | Msa0375920:CDS | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | - | chr3_1:75882891-75882910 | Msa0375920:CDS | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | + | chr3_1:75882912-75882931 | None:intergenic | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | + | chr3_1:75883366-75883385 | None:intergenic | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | + | chr3_1:75883447-75883466 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | + | chr3_1:75883518-75883537 | None:intergenic | 25.0% |
!!! | TCGTTTTATTCAAGTTTGAA+AGG | - | chr3_1:75884036-75884055 | Msa0375920:five_prime_UTR | 25.0% |
!! | TTATTCAAGTTTGAAAGGAA+AGG | - | chr3_1:75884041-75884060 | Msa0375920:five_prime_UTR | 25.0% |
!! | TATTCAAGTTTGAAAGGAAA+GGG | - | chr3_1:75884042-75884061 | Msa0375920:five_prime_UTR | 25.0% |
!!! | ATTTGAGTTTTTTTTCCGTA+AGG | + | chr3_1:75884134-75884153 | None:intergenic | 25.0% |
! | AAAGTTTGACTGAAAAAAAG+TGG | + | chr3_1:75882186-75882205 | None:intergenic | 25.0% |
! | GAAAAGAAAGGAAACATAAA+AGG | + | chr3_1:75882214-75882233 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | - | chr3_1:75882429-75882448 | Msa0375920:three_prime_UTR | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | + | chr3_1:75882530-75882549 | None:intergenic | 25.0% |
!! | CCATATTAACATGTCTTTTA+CGG | + | chr3_1:75882575-75882594 | None:intergenic | 25.0% |
! | CGTAAAAGACATGTTAATAT+GGG | - | chr3_1:75882573-75882592 | Msa0375920:CDS | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | - | chr3_1:75882891-75882910 | Msa0375920:CDS | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | + | chr3_1:75882912-75882931 | None:intergenic | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | + | chr3_1:75883366-75883385 | None:intergenic | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | + | chr3_1:75883447-75883466 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | + | chr3_1:75883518-75883537 | None:intergenic | 25.0% |
!!! | TCGTTTTATTCAAGTTTGAA+AGG | - | chr3_1:75884036-75884055 | Msa0375920:five_prime_UTR | 25.0% |
!! | TTATTCAAGTTTGAAAGGAA+AGG | - | chr3_1:75884041-75884060 | Msa0375920:five_prime_UTR | 25.0% |
!! | TATTCAAGTTTGAAAGGAAA+GGG | - | chr3_1:75884042-75884061 | Msa0375920:five_prime_UTR | 25.0% |
!!! | ATTTGAGTTTTTTTTCCGTA+AGG | + | chr3_1:75884134-75884153 | None:intergenic | 25.0% |
TTATGGGAATGGGATATAAA+GGG | + | chr3_1:75882267-75882286 | None:intergenic | 30.0% | |
! | TAAAACTAAATCAAGGGTGT+TGG | + | chr3_1:75882310-75882329 | None:intergenic | 30.0% |
GATGGCTAAAACTAAATCAA+GGG | + | chr3_1:75882316-75882335 | None:intergenic | 30.0% | |
AGATGGCTAAAACTAAATCA+AGG | + | chr3_1:75882317-75882336 | None:intergenic | 30.0% | |
TCATTCTTAATCTAGCTACA+TGG | - | chr3_1:75882392-75882411 | Msa0375920:three_prime_UTR | 30.0% | |
CATTCTTAATCTAGCTACAT+GGG | - | chr3_1:75882393-75882412 | Msa0375920:three_prime_UTR | 30.0% | |
!! | ATTTGAAAAGGCACTTGAAA+TGG | - | chr3_1:75882545-75882564 | Msa0375920:CDS | 30.0% |
CCGTAAAAGACATGTTAATA+TGG | - | chr3_1:75882572-75882591 | Msa0375920:CDS | 30.0% | |
CAAATTTACATACCTCTTTC+TGG | + | chr3_1:75882730-75882749 | None:intergenic | 30.0% | |
!!! | AAACTTTTTTTATACGACCC+GGG | - | chr3_1:75882892-75882911 | Msa0375920:CDS | 30.0% |
AATTATATACCTTGGATGCA+CGG | + | chr3_1:75883134-75883153 | None:intergenic | 30.0% | |
ATGTGATTTCAAAGATAGCT+GGG | + | chr3_1:75883299-75883318 | None:intergenic | 30.0% | |
TATGTGATTTCAAAGATAGC+TGG | + | chr3_1:75883300-75883319 | None:intergenic | 30.0% | |
! | TTTGTTTCTTGGGTTTGAAA+TGG | + | chr3_1:75883381-75883400 | None:intergenic | 30.0% |
TTCAAAAGTTGTTCATTTGG+TGG | + | chr3_1:75883444-75883463 | None:intergenic | 30.0% | |
!! | ATGATTGGTTTAGGAAATCT+AGG | + | chr3_1:75883503-75883522 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | + | chr3_1:75883512-75883531 | None:intergenic | 30.0% |
! | TCAAGTACATGGTTTTCAAA+TGG | + | chr3_1:75883531-75883550 | None:intergenic | 30.0% |
TAATCTCACTTGCCATATTT+GGG | + | chr3_1:75883650-75883669 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | + | chr3_1:75883651-75883670 | None:intergenic | 30.0% | |
ACTTTACATTGTTGCACATA+TGG | + | chr3_1:75883995-75884014 | None:intergenic | 30.0% | |
! | ATTCAAGTTTGAAAGGAAAG+GGG | - | chr3_1:75884043-75884062 | Msa0375920:five_prime_UTR | 30.0% |
AGAATTGGAGACTAATTCAA+TGG | + | chr3_1:75884083-75884102 | None:intergenic | 30.0% | |
! | TAGCACAAATGTTTTCCTTA+CGG | - | chr3_1:75884116-75884135 | Msa0375920:five_prime_UTR | 30.0% |
TTATGGGAATGGGATATAAA+GGG | + | chr3_1:75882267-75882286 | None:intergenic | 30.0% | |
! | TAAAACTAAATCAAGGGTGT+TGG | + | chr3_1:75882310-75882329 | None:intergenic | 30.0% |
GATGGCTAAAACTAAATCAA+GGG | + | chr3_1:75882316-75882335 | None:intergenic | 30.0% | |
AGATGGCTAAAACTAAATCA+AGG | + | chr3_1:75882317-75882336 | None:intergenic | 30.0% | |
TCATTCTTAATCTAGCTACA+TGG | - | chr3_1:75882392-75882411 | Msa0375920:three_prime_UTR | 30.0% | |
CATTCTTAATCTAGCTACAT+GGG | - | chr3_1:75882393-75882412 | Msa0375920:three_prime_UTR | 30.0% | |
!! | ATTTGAAAAGGCACTTGAAA+TGG | - | chr3_1:75882545-75882564 | Msa0375920:CDS | 30.0% |
CCGTAAAAGACATGTTAATA+TGG | - | chr3_1:75882572-75882591 | Msa0375920:CDS | 30.0% | |
CAAATTTACATACCTCTTTC+TGG | + | chr3_1:75882730-75882749 | None:intergenic | 30.0% | |
!!! | AAACTTTTTTTATACGACCC+GGG | - | chr3_1:75882892-75882911 | Msa0375920:CDS | 30.0% |
AATTATATACCTTGGATGCA+CGG | + | chr3_1:75883134-75883153 | None:intergenic | 30.0% | |
ATGTGATTTCAAAGATAGCT+GGG | + | chr3_1:75883299-75883318 | None:intergenic | 30.0% | |
TATGTGATTTCAAAGATAGC+TGG | + | chr3_1:75883300-75883319 | None:intergenic | 30.0% | |
! | TTTGTTTCTTGGGTTTGAAA+TGG | + | chr3_1:75883381-75883400 | None:intergenic | 30.0% |
TTCAAAAGTTGTTCATTTGG+TGG | + | chr3_1:75883444-75883463 | None:intergenic | 30.0% | |
!! | ATGATTGGTTTAGGAAATCT+AGG | + | chr3_1:75883503-75883522 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | + | chr3_1:75883512-75883531 | None:intergenic | 30.0% |
! | TCAAGTACATGGTTTTCAAA+TGG | + | chr3_1:75883531-75883550 | None:intergenic | 30.0% |
TAATCTCACTTGCCATATTT+GGG | + | chr3_1:75883650-75883669 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | + | chr3_1:75883651-75883670 | None:intergenic | 30.0% | |
ACTTTACATTGTTGCACATA+TGG | + | chr3_1:75883995-75884014 | None:intergenic | 30.0% | |
! | ATTCAAGTTTGAAAGGAAAG+GGG | - | chr3_1:75884043-75884062 | Msa0375920:five_prime_UTR | 30.0% |
AGAATTGGAGACTAATTCAA+TGG | + | chr3_1:75884083-75884102 | None:intergenic | 30.0% | |
! | TAGCACAAATGTTTTCCTTA+CGG | - | chr3_1:75884116-75884135 | Msa0375920:five_prime_UTR | 30.0% |
AGAAAAGAGTGGGAAAAGAA+AGG | + | chr3_1:75882226-75882245 | None:intergenic | 35.0% | |
TTTGAAGGGAAGAAAAGAGT+GGG | + | chr3_1:75882236-75882255 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAAGAAAAGAG+TGG | + | chr3_1:75882237-75882256 | None:intergenic | 35.0% |
!! | AAAGGGATGTGTGTTTTGAA+GGG | + | chr3_1:75882250-75882269 | None:intergenic | 35.0% |
!! | TAAAGGGATGTGTGTTTTGA+AGG | + | chr3_1:75882251-75882270 | None:intergenic | 35.0% |
GTTATGGGAATGGGATATAA+AGG | + | chr3_1:75882268-75882287 | None:intergenic | 35.0% | |
!! | AATCAAGGGTGTTGGAATTT+GGG | + | chr3_1:75882302-75882321 | None:intergenic | 35.0% |
!! | AAATCAAGGGTGTTGGAATT+TGG | + | chr3_1:75882303-75882322 | None:intergenic | 35.0% |
AGATAAGCTACTACAAGGAT+TGG | - | chr3_1:75882434-75882453 | Msa0375920:three_prime_UTR | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | + | chr3_1:75882502-75882521 | None:intergenic | 35.0% | |
! | TTCAAGTGCCTTTTCAAATG+TGG | + | chr3_1:75882544-75882563 | None:intergenic | 35.0% |
ATCACGGTTAAAATCTCTGT+CGG | + | chr3_1:75882697-75882716 | None:intergenic | 35.0% | |
!! | AAACATATTCGAGTTGAACC+AGG | - | chr3_1:75883037-75883056 | Msa0375920:CDS | 35.0% |
GGGTATAGTTGGAGAAAATA+TGG | - | chr3_1:75883088-75883107 | Msa0375920:intron | 35.0% | |
!! | ATCTTTGAAATCACATACCG+AGG | - | chr3_1:75883303-75883322 | Msa0375920:intron | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | + | chr3_1:75883419-75883438 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | + | chr3_1:75883420-75883439 | None:intergenic | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | + | chr3_1:75883428-75883447 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | + | chr3_1:75883542-75883561 | None:intergenic | 35.0% |
ACTTATTCCTGAATTTGCAG+GGG | + | chr3_1:75883595-75883614 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | + | chr3_1:75883596-75883615 | None:intergenic | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | + | chr3_1:75883597-75883616 | None:intergenic | 35.0% | |
! | TCCAAGTGTTTTCCCAAATA+TGG | - | chr3_1:75883635-75883654 | Msa0375920:CDS | 35.0% |
! | AGTTGTGGAATGTGAAGTTT+TGG | + | chr3_1:75883749-75883768 | None:intergenic | 35.0% |
AAGAGAAAAATCGTGAGTTG+TGG | + | chr3_1:75883764-75883783 | None:intergenic | 35.0% | |
! | TTCAACCTCTTGATTTTGCA+GGG | + | chr3_1:75883890-75883909 | None:intergenic | 35.0% |
! | ATTCAACCTCTTGATTTTGC+AGG | + | chr3_1:75883891-75883910 | None:intergenic | 35.0% |
GTACGCGTTGAAAATTGAAA+TGG | - | chr3_1:75884013-75884032 | Msa0375920:five_prime_UTR | 35.0% | |
AGAAAAGAGTGGGAAAAGAA+AGG | + | chr3_1:75882226-75882245 | None:intergenic | 35.0% | |
TTTGAAGGGAAGAAAAGAGT+GGG | + | chr3_1:75882236-75882255 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAAGAAAAGAG+TGG | + | chr3_1:75882237-75882256 | None:intergenic | 35.0% |
!! | AAAGGGATGTGTGTTTTGAA+GGG | + | chr3_1:75882250-75882269 | None:intergenic | 35.0% |
!! | TAAAGGGATGTGTGTTTTGA+AGG | + | chr3_1:75882251-75882270 | None:intergenic | 35.0% |
GTTATGGGAATGGGATATAA+AGG | + | chr3_1:75882268-75882287 | None:intergenic | 35.0% | |
!! | AATCAAGGGTGTTGGAATTT+GGG | + | chr3_1:75882302-75882321 | None:intergenic | 35.0% |
!! | AAATCAAGGGTGTTGGAATT+TGG | + | chr3_1:75882303-75882322 | None:intergenic | 35.0% |
AGATAAGCTACTACAAGGAT+TGG | - | chr3_1:75882434-75882453 | Msa0375920:three_prime_UTR | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | + | chr3_1:75882502-75882521 | None:intergenic | 35.0% | |
! | TTCAAGTGCCTTTTCAAATG+TGG | + | chr3_1:75882544-75882563 | None:intergenic | 35.0% |
ATCACGGTTAAAATCTCTGT+CGG | + | chr3_1:75882697-75882716 | None:intergenic | 35.0% | |
!! | AAACATATTCGAGTTGAACC+AGG | - | chr3_1:75883037-75883056 | Msa0375920:CDS | 35.0% |
GGGTATAGTTGGAGAAAATA+TGG | - | chr3_1:75883088-75883107 | Msa0375920:intron | 35.0% | |
!! | ATCTTTGAAATCACATACCG+AGG | - | chr3_1:75883303-75883322 | Msa0375920:intron | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | + | chr3_1:75883419-75883438 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | + | chr3_1:75883420-75883439 | None:intergenic | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | + | chr3_1:75883428-75883447 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | + | chr3_1:75883542-75883561 | None:intergenic | 35.0% |
ACTTATTCCTGAATTTGCAG+GGG | + | chr3_1:75883595-75883614 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | + | chr3_1:75883596-75883615 | None:intergenic | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | + | chr3_1:75883597-75883616 | None:intergenic | 35.0% | |
! | TCCAAGTGTTTTCCCAAATA+TGG | - | chr3_1:75883635-75883654 | Msa0375920:CDS | 35.0% |
! | AGTTGTGGAATGTGAAGTTT+TGG | + | chr3_1:75883749-75883768 | None:intergenic | 35.0% |
AAGAGAAAAATCGTGAGTTG+TGG | + | chr3_1:75883764-75883783 | None:intergenic | 35.0% | |
! | TTCAACCTCTTGATTTTGCA+GGG | + | chr3_1:75883890-75883909 | None:intergenic | 35.0% |
! | ATTCAACCTCTTGATTTTGC+AGG | + | chr3_1:75883891-75883910 | None:intergenic | 35.0% |
GTACGCGTTGAAAATTGAAA+TGG | - | chr3_1:75884013-75884032 | Msa0375920:five_prime_UTR | 35.0% | |
TGAAGGTGAGTTATGGGAAT+GGG | + | chr3_1:75882277-75882296 | None:intergenic | 40.0% | |
ATGAAGGTGAGTTATGGGAA+TGG | + | chr3_1:75882278-75882297 | None:intergenic | 40.0% | |
TGGGAATGAAGGTGAGTTAT+GGG | + | chr3_1:75882283-75882302 | None:intergenic | 40.0% | |
TTGGGAATGAAGGTGAGTTA+TGG | + | chr3_1:75882284-75882303 | None:intergenic | 40.0% | |
GTGTTGGAATTTGGGAATGA+AGG | + | chr3_1:75882294-75882313 | None:intergenic | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | + | chr3_1:75882647-75882666 | None:intergenic | 40.0% | |
!! | TTCTGGAAGCATTGTGATCA+CGG | + | chr3_1:75882713-75882732 | None:intergenic | 40.0% |
ATCACAATGCTTCCAGAAAG+AGG | - | chr3_1:75882715-75882734 | Msa0375920:CDS | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | - | chr3_1:75882783-75882802 | Msa0375920:CDS | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | + | chr3_1:75882834-75882853 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | - | chr3_1:75882834-75882853 | Msa0375920:CDS | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | - | chr3_1:75882850-75882869 | Msa0375920:CDS | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | - | chr3_1:75882851-75882870 | Msa0375920:CDS | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | - | chr3_1:75883011-75883030 | Msa0375920:CDS | 40.0% | |
!! | TATTCGAGTTGAACCAGGAA+TGG | - | chr3_1:75883042-75883061 | Msa0375920:CDS | 40.0% |
CAACTATACCCATCATCAAG+AGG | + | chr3_1:75883079-75883098 | None:intergenic | 40.0% | |
!! | CTCTTGATGATGGGTATAGT+TGG | - | chr3_1:75883077-75883096 | Msa0375920:intron | 40.0% |
TATGGTCAGAAAGACATCCT+TGG | - | chr3_1:75883106-75883125 | Msa0375920:intron | 40.0% | |
! | TTTTGTGTGTGTGTATGCAG+AGG | - | chr3_1:75883201-75883220 | Msa0375920:CDS | 40.0% |
TGCAGTCATAGAAACGTTCT+AGG | - | chr3_1:75883234-75883253 | Msa0375920:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | - | chr3_1:75883335-75883354 | Msa0375920:intron | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | - | chr3_1:75883339-75883358 | Msa0375920:intron | 40.0% | |
TAATGTTGGACCAACCACAT+TGG | + | chr3_1:75883352-75883371 | None:intergenic | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | - | chr3_1:75883456-75883475 | Msa0375920:intron | 40.0% |
TTTGCAGGGGAAACATATGA+AGG | + | chr3_1:75883582-75883601 | None:intergenic | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | - | chr3_1:75883585-75883604 | Msa0375920:CDS | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | + | chr3_1:75883633-75883652 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | + | chr3_1:75883639-75883658 | None:intergenic | 40.0% | |
AAACACACCAACTGCTTCTA+TGG | - | chr3_1:75883692-75883711 | Msa0375920:CDS | 40.0% | |
TATGACCCTGCAAAATCAAG+AGG | - | chr3_1:75883882-75883901 | Msa0375920:CDS | 40.0% | |
TCCTAGCTACTCGTATAGTA+GGG | - | chr3_1:75883918-75883937 | Msa0375920:five_prime_UTR | 40.0% | |
CTACTCGTATAGTAGGGATA+TGG | - | chr3_1:75883924-75883943 | Msa0375920:five_prime_UTR | 40.0% | |
TGAAGGTGAGTTATGGGAAT+GGG | + | chr3_1:75882277-75882296 | None:intergenic | 40.0% | |
ATGAAGGTGAGTTATGGGAA+TGG | + | chr3_1:75882278-75882297 | None:intergenic | 40.0% | |
TGGGAATGAAGGTGAGTTAT+GGG | + | chr3_1:75882283-75882302 | None:intergenic | 40.0% | |
TTGGGAATGAAGGTGAGTTA+TGG | + | chr3_1:75882284-75882303 | None:intergenic | 40.0% | |
GTGTTGGAATTTGGGAATGA+AGG | + | chr3_1:75882294-75882313 | None:intergenic | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | + | chr3_1:75882647-75882666 | None:intergenic | 40.0% | |
!! | TTCTGGAAGCATTGTGATCA+CGG | + | chr3_1:75882713-75882732 | None:intergenic | 40.0% |
ATCACAATGCTTCCAGAAAG+AGG | - | chr3_1:75882715-75882734 | Msa0375920:CDS | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | - | chr3_1:75882783-75882802 | Msa0375920:CDS | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | + | chr3_1:75882834-75882853 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | - | chr3_1:75882834-75882853 | Msa0375920:CDS | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | - | chr3_1:75882850-75882869 | Msa0375920:CDS | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | - | chr3_1:75882851-75882870 | Msa0375920:CDS | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | - | chr3_1:75883011-75883030 | Msa0375920:CDS | 40.0% | |
!! | TATTCGAGTTGAACCAGGAA+TGG | - | chr3_1:75883042-75883061 | Msa0375920:CDS | 40.0% |
CAACTATACCCATCATCAAG+AGG | + | chr3_1:75883079-75883098 | None:intergenic | 40.0% | |
!! | CTCTTGATGATGGGTATAGT+TGG | - | chr3_1:75883077-75883096 | Msa0375920:intron | 40.0% |
TATGGTCAGAAAGACATCCT+TGG | - | chr3_1:75883106-75883125 | Msa0375920:intron | 40.0% | |
! | TTTTGTGTGTGTGTATGCAG+AGG | - | chr3_1:75883201-75883220 | Msa0375920:CDS | 40.0% |
TGCAGTCATAGAAACGTTCT+AGG | - | chr3_1:75883234-75883253 | Msa0375920:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | - | chr3_1:75883335-75883354 | Msa0375920:intron | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | - | chr3_1:75883339-75883358 | Msa0375920:intron | 40.0% | |
TAATGTTGGACCAACCACAT+TGG | + | chr3_1:75883352-75883371 | None:intergenic | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | - | chr3_1:75883456-75883475 | Msa0375920:intron | 40.0% |
TTTGCAGGGGAAACATATGA+AGG | + | chr3_1:75883582-75883601 | None:intergenic | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | - | chr3_1:75883585-75883604 | Msa0375920:CDS | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | + | chr3_1:75883633-75883652 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | + | chr3_1:75883639-75883658 | None:intergenic | 40.0% | |
AAACACACCAACTGCTTCTA+TGG | - | chr3_1:75883692-75883711 | Msa0375920:CDS | 40.0% | |
TATGACCCTGCAAAATCAAG+AGG | - | chr3_1:75883882-75883901 | Msa0375920:CDS | 40.0% | |
TCCTAGCTACTCGTATAGTA+GGG | - | chr3_1:75883918-75883937 | Msa0375920:five_prime_UTR | 40.0% | |
CTACTCGTATAGTAGGGATA+TGG | - | chr3_1:75883924-75883943 | Msa0375920:five_prime_UTR | 40.0% | |
GCTACTACAAGGATTGGAGT+TGG | - | chr3_1:75882440-75882459 | Msa0375920:three_prime_UTR | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | + | chr3_1:75882643-75882662 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | - | chr3_1:75883068-75883087 | Msa0375920:CDS | 45.0% |
TTGTGCATGTGTGGTTTCCT+CGG | + | chr3_1:75883323-75883342 | None:intergenic | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | + | chr3_1:75883332-75883351 | None:intergenic | 45.0% | |
GAACTCTTAGACCTGTTCGT+AGG | + | chr3_1:75883470-75883489 | None:intergenic | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | + | chr3_1:75883702-75883721 | None:intergenic | 45.0% | |
GTCCTAGCTACTCGTATAGT+AGG | - | chr3_1:75883917-75883936 | Msa0375920:five_prime_UTR | 45.0% | |
TCCCTACTATACGAGTAGCT+AGG | + | chr3_1:75883922-75883941 | None:intergenic | 45.0% | |
GCTACTACAAGGATTGGAGT+TGG | - | chr3_1:75882440-75882459 | Msa0375920:three_prime_UTR | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | + | chr3_1:75882643-75882662 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | - | chr3_1:75883068-75883087 | Msa0375920:CDS | 45.0% |
TTGTGCATGTGTGGTTTCCT+CGG | + | chr3_1:75883323-75883342 | None:intergenic | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | + | chr3_1:75883332-75883351 | None:intergenic | 45.0% | |
GAACTCTTAGACCTGTTCGT+AGG | + | chr3_1:75883470-75883489 | None:intergenic | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | + | chr3_1:75883702-75883721 | None:intergenic | 45.0% | |
GTCCTAGCTACTCGTATAGT+AGG | - | chr3_1:75883917-75883936 | Msa0375920:five_prime_UTR | 45.0% | |
TCCCTACTATACGAGTAGCT+AGG | + | chr3_1:75883922-75883941 | None:intergenic | 45.0% | |
!! | ATAAATAAATATAAAAACTA+GGG | + | chr3_1:75882987-75883006 | None:intergenic | 5.0% |
!! | AATAAATAAATATAAAAACT+AGG | + | chr3_1:75882988-75883007 | None:intergenic | 5.0% |
!! | ATAAATAAATATAAAAACTA+GGG | + | chr3_1:75882987-75883006 | None:intergenic | 5.0% |
!! | AATAAATAAATATAAAAACT+AGG | + | chr3_1:75882988-75883007 | None:intergenic | 5.0% |
!! | CTGAGGCTGAAGGGTATTGT+TGG | + | chr3_1:75882611-75882630 | None:intergenic | 50.0% |
CAACAATACCCTTCAGCCTC+AGG | - | chr3_1:75882609-75882628 | Msa0375920:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | + | chr3_1:75882620-75882639 | None:intergenic | 50.0% | |
AGTTGAACCAGGAATGGCAG+TGG | - | chr3_1:75883048-75883067 | Msa0375920:CDS | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | - | chr3_1:75883067-75883086 | Msa0375920:CDS | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | + | chr3_1:75883675-75883694 | None:intergenic | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | + | chr3_1:75883678-75883697 | None:intergenic | 50.0% | |
!! | CTGAGGCTGAAGGGTATTGT+TGG | + | chr3_1:75882611-75882630 | None:intergenic | 50.0% |
CAACAATACCCTTCAGCCTC+AGG | - | chr3_1:75882609-75882628 | Msa0375920:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | + | chr3_1:75882620-75882639 | None:intergenic | 50.0% | |
AGTTGAACCAGGAATGGCAG+TGG | - | chr3_1:75883048-75883067 | Msa0375920:CDS | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | - | chr3_1:75883067-75883086 | Msa0375920:CDS | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | + | chr3_1:75883675-75883694 | None:intergenic | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | + | chr3_1:75883678-75883697 | None:intergenic | 50.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | + | chr3_1:75882621-75882640 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | + | chr3_1:75882628-75882647 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | + | chr3_1:75882666-75882685 | None:intergenic | 55.0% |
CTGTCGGAGTCTTCACTTCG+CGG | + | chr3_1:75882681-75882700 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | - | chr3_1:75883052-75883071 | Msa0375920:CDS | 55.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | + | chr3_1:75882621-75882640 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | + | chr3_1:75882628-75882647 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | + | chr3_1:75882666-75882685 | None:intergenic | 55.0% |
CTGTCGGAGTCTTCACTTCG+CGG | + | chr3_1:75882681-75882700 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | - | chr3_1:75883052-75883071 | Msa0375920:CDS | 55.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | + | chr3_1:75882663-75882682 | None:intergenic | 60.0% |
GGACCTTCCACTGCCATTCC+TGG | + | chr3_1:75883058-75883077 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | - | chr3_1:75883122-75883141 | Msa0375920:intron | 60.0% | |
ACCTTGGATGCACGGCTCCA+AGG | + | chr3_1:75883126-75883145 | None:intergenic | 60.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | + | chr3_1:75882663-75882682 | None:intergenic | 60.0% |
GGACCTTCCACTGCCATTCC+TGG | + | chr3_1:75883058-75883077 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | - | chr3_1:75883122-75883141 | Msa0375920:intron | 60.0% | |
ACCTTGGATGCACGGCTCCA+AGG | + | chr3_1:75883126-75883145 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 75882159 | 75884157 | 75882159 | ID=Msa0375920;Name=Msa0375920 |
chr3_1 | mRNA | 75882159 | 75884157 | 75882159 | ID=Msa0375920-mRNA-1;Parent=Msa0375920;Name=Msa0375920-mRNA-1;_AED=0.03;_eAED=0.03;_QI=252|1|1|1|1|1|3|372|340 |
chr3_1 | exon | 75882159 | 75883095 | 75882159 | ID=Msa0375920-mRNA-1:exon:17839;Parent=Msa0375920-mRNA-1 |
chr3_1 | exon | 75883173 | 75883304 | 75883173 | ID=Msa0375920-mRNA-1:exon:17838;Parent=Msa0375920-mRNA-1 |
chr3_1 | exon | 75883580 | 75884157 | 75883580 | ID=Msa0375920-mRNA-1:exon:17837;Parent=Msa0375920-mRNA-1 |
chr3_1 | five_prime_UTR | 75883906 | 75884157 | 75883906 | ID=Msa0375920-mRNA-1:five_prime_utr;Parent=Msa0375920-mRNA-1 |
chr3_1 | CDS | 75883580 | 75883905 | 75883580 | ID=Msa0375920-mRNA-1:cds;Parent=Msa0375920-mRNA-1 |
chr3_1 | CDS | 75883173 | 75883304 | 75883173 | ID=Msa0375920-mRNA-1:cds;Parent=Msa0375920-mRNA-1 |
chr3_1 | CDS | 75882531 | 75883095 | 75882531 | ID=Msa0375920-mRNA-1:cds;Parent=Msa0375920-mRNA-1 |
chr3_1 | three_prime_UTR | 75882159 | 75882530 | 75882159 | ID=Msa0375920-mRNA-1:three_prime_utr;Parent=Msa0375920-mRNA-1 |
Gene Sequence |
Protein sequence |