AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0518850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518850 MtrunA17_Chr3g0131181 98.881 268 3 0 4 271 185 452 0.0 544
Msa0518850 MtrunA17_Chr8g0385341 86.940 268 35 0 4 271 186 453 2.85e-171 484
Msa0518850 MtrunA17_Chr1g0200601 78.358 268 58 0 4 271 186 453 7.94e-161 457
Msa0518850 MtrunA17_Chr1g0170281 75.277 271 67 0 1 271 271 541 8.38e-151 434
Msa0518850 MtrunA17_Chr5g0448721 72.761 268 73 0 4 271 252 519 2.44e-146 422
Msa0518850 MtrunA17_Chr1g0176421 71.375 269 77 0 4 272 317 585 1.22e-141 413
Msa0518850 MtrunA17_Chr1g0176751 72.015 268 75 0 4 271 280 547 1.15e-140 409
Msa0518850 MtrunA17_Chr7g0267751 68.657 268 84 0 4 271 291 558 1.16e-135 397
Msa0518850 MtrunA17_Chr0c02g0489761 62.825 269 99 1 4 271 234 502 2.82e-123 363
Msa0518850 MtrunA17_Chr3g0098951 66.165 266 88 2 4 268 240 504 1.67e-122 361
Msa0518850 MtrunA17_Chr8g0387671 63.197 269 98 1 4 271 222 490 7.40e-122 358
Msa0518850 MtrunA17_Chr5g0444171 62.825 269 99 1 4 271 248 516 1.87e-121 358
Msa0518850 MtrunA17_Chr4g0074811 62.454 269 100 1 4 271 247 515 5.84e-120 354
Msa0518850 MtrunA17_Chr5g0441691 61.423 267 102 1 6 271 226 492 5.97e-120 354
Msa0518850 MtrunA17_Chr1g0157131 62.454 269 100 1 4 271 230 498 2.57e-119 352
Msa0518850 MtrunA17_Chr5g0397101 62.825 269 98 2 4 271 223 490 5.61e-119 351
Msa0518850 MtrunA17_Chr4g0059951 57.993 269 111 2 4 270 229 497 7.75e-109 327
Msa0518850 MtrunA17_Chr7g0242561 54.275 269 121 1 4 270 212 480 1.51e-102 310
Msa0518850 MtrunA17_Chr7g0257751 55.285 246 110 0 4 249 214 459 2.95e-98 299
Msa0518850 MtrunA17_Chr1g0173541 54.918 244 110 0 6 249 210 453 3.33e-98 298
Msa0518850 MtrunA17_Chr4g0074791 54.275 269 111 3 4 271 252 509 3.85e-94 288
Msa0518850 MtrunA17_Chr4g0033371 47.970 271 140 1 1 270 225 495 1.73e-89 276
Msa0518850 MtrunA17_Chr5g0405421 43.015 272 144 3 6 270 259 526 1.10e-72 233
Msa0518850 MtrunA17_Chr7g0267771 52.128 188 81 2 4 191 244 422 5.31e-60 198
Msa0518850 MtrunA17_Chr8g0374701 40.856 257 143 4 4 255 288 540 3.10e-59 199
Msa0518850 MtrunA17_Chr4g0045261 39.689 257 146 4 4 255 297 549 3.86e-58 196
Msa0518850 MtrunA17_Chr5g0402551 40.154 259 142 5 4 255 294 546 9.37e-56 189
Msa0518850 MtrunA17_Chr3g0127571 38.057 247 143 5 6 246 300 542 1.01e-52 181
Msa0518850 MtrunA17_Chr7g0256001 36.981 265 156 4 4 260 301 562 3.80e-52 180
Msa0518850 MtrunA17_Chr7g0276111 35.887 248 152 3 4 246 304 549 1.04e-50 176
Msa0518850 MtrunA17_Chr5g0444191 61.983 121 43 1 4 124 64 181 2.52e-49 163
Msa0518850 MtrunA17_Chr8g0355131 32.215 298 170 7 4 271 199 494 5.80e-33 127
Msa0518850 MtrunA17_Chr1g0190131 51.402 107 51 1 2 107 159 265 5.75e-31 117
Msa0518850 MtrunA17_Chr1g0203881 57.426 101 43 0 9 109 202 302 1.84e-30 119
Msa0518850 MtrunA17_Chr5g0441771 53.846 104 28 1 72 175 18 101 4.82e-29 107
Msa0518850 MtrunA17_Chr3g0132591 45.098 102 56 0 6 107 260 361 1.62e-23 100
Msa0518850 MtrunA17_Chr7g0274941 39.655 116 63 2 7 115 173 288 5.71e-21 90.5
Msa0518850 MtrunA17_Chr5g0440931 34.848 132 83 2 142 270 1 132 2.71e-19 82.8
Msa0518850 MtrunA17_Chr3g0093271 34.091 132 84 2 142 270 52 183 3.99e-19 83.6
Msa0518850 MtrunA17_Chr7g0254731 34.091 132 84 2 142 270 1 132 4.09e-19 82.4
Msa0518850 MtrunA17_Chr6g0460211 34.091 132 84 2 142 270 1 132 9.78e-19 81.3
Msa0518850 MtrunA17_Chr7g0244561 38.261 115 65 3 5 117 173 283 4.41e-18 84.0
Msa0518850 MtrunA17_Chr1g0188171 34.783 138 87 2 142 276 1 138 7.77e-18 79.0
Msa0518850 MtrunA17_Chr4g0001331 43.810 105 53 3 11 113 181 281 9.43e-18 83.2
Msa0518850 MtrunA17_Chr7g0245231 35.075 134 84 2 146 276 23 156 3.06e-17 77.8
Msa0518850 MtrunA17_Chr8g0346071 39.048 105 58 3 4 106 170 270 1.77e-16 79.3
Msa0518850 MtrunA17_Chr1g0166281 34.091 132 84 2 142 270 1 132 1.87e-16 75.1
Msa0518850 MtrunA17_Chr2g0304111 41.748 103 54 4 5 105 179 277 2.11e-16 79.3
Msa0518850 MtrunA17_Chr6g0468751 32.143 196 104 6 11 197 178 353 2.27e-16 79.3
Msa0518850 MtrunA17_Chr4g0013131 37.391 115 63 4 5 114 167 277 2.57e-16 79.0
Msa0518850 MtrunA17_Chr6g0450921 34.921 126 79 2 154 276 30 155 2.87e-16 75.1
Msa0518850 MtrunA17_Chr6g0453681 32.461 191 110 6 11 197 178 353 7.05e-16 77.8
Msa0518850 MtrunA17_Chr3g0140631 38.235 102 60 2 9 109 192 291 1.76e-15 75.5
Msa0518850 MtrunA17_Chr5g0441011 39.640 111 61 4 5 113 169 275 2.45e-15 75.9
Msa0518850 MtrunA17_Chr4g0063881 40.351 114 61 4 4 115 164 272 4.22e-15 75.1
Msa0518850 MtrunA17_Chr4g0008561 35.135 111 69 3 9 117 178 287 4.74e-15 75.5
Msa0518850 MtrunA17_Chr5g0432491 36.000 100 58 3 9 106 183 278 5.10e-15 75.1
Msa0518850 MtrunA17_Chr4g0069301 37.755 98 55 3 5 100 182 275 7.52e-15 74.7
Msa0518850 MtrunA17_Chr2g0302431 39.806 103 56 4 5 105 176 274 1.01e-14 74.3
Msa0518850 MtrunA17_Chr1g0150321 40.816 98 52 3 11 106 174 267 1.07e-14 73.9
Msa0518850 MtrunA17_Chr8g0366401 31.818 132 84 2 145 270 9 140 1.53e-14 70.1
Msa0518850 MtrunA17_Chr2g0333821 42.857 98 50 3 11 106 175 268 2.30e-14 73.2
Msa0518850 MtrunA17_Chr5g0428031 42.718 103 53 4 5 105 163 261 3.23e-14 72.8
Msa0518850 MtrunA17_Chr3g0131061 35.849 106 64 2 8 109 158 263 3.31e-14 72.0
Msa0518850 MtrunA17_Chr3g0107051 35.577 104 61 3 5 106 176 275 3.55e-14 72.4
Msa0518850 MtrunA17_Chr7g0244521 35.922 103 60 3 5 105 167 265 4.41e-14 72.4
Msa0518850 MtrunA17_Chr2g0284011 34.286 105 63 3 4 106 166 266 7.77e-14 71.6
Msa0518850 MtrunA17_Chr3g0132671 40.206 97 52 2 11 105 208 300 8.43e-14 71.6
Msa0518850 MtrunA17_Chr8g0353621 34.314 102 64 2 9 109 165 264 9.03e-14 70.1
Msa0518850 MtrunA17_Chr3g0135951 40.196 102 56 3 9 106 301 401 1.16e-13 71.2
Msa0518850 MtrunA17_Chr8g0351491 34.314 102 64 2 9 109 171 270 1.32e-13 69.7
Msa0518850 MtrunA17_Chr6g0478601 41.284 109 51 4 10 110 301 404 1.41e-13 70.9
Msa0518850 MtrunA17_Chr1g0205421 35.922 103 60 3 5 105 167 265 2.01e-13 70.5
Msa0518850 MtrunA17_Chr5g0432471 35.577 104 61 3 5 106 167 266 2.18e-13 70.1
Msa0518850 MtrunA17_Chr2g0284031 34.615 104 62 4 5 106 186 285 2.57e-13 70.1
Msa0518850 MtrunA17_Chr5g0399911 42.000 100 54 4 10 105 175 274 3.67e-13 68.9
Msa0518850 MtrunA17_Chr8g0385281 34.906 106 65 2 8 109 159 264 3.67e-13 68.9
Msa0518850 MtrunA17_Chr3g0125381 34.314 102 64 2 9 109 110 209 4.58e-13 67.0
Msa0518850 MtrunA17_Chr5g0441781 50.000 58 28 1 215 271 1 58 7.00e-13 63.5
Msa0518850 MtrunA17_Chr2g0277501 33.333 105 66 2 9 109 159 263 8.83e-13 67.8
Msa0518850 MtrunA17_Chr1g0170551 29.091 110 73 2 2 110 156 261 1.02e-12 68.6
Msa0518850 MtrunA17_Chr5g0428981 42.453 106 56 3 9 110 951 1055 1.07e-12 68.6
Msa0518850 MtrunA17_Chr3g0123791 36.538 104 62 3 9 108 160 263 1.20e-12 67.4
Msa0518850 MtrunA17_Chr4g0018201 42.727 110 50 4 9 110 947 1051 1.36e-12 68.2
Msa0518850 MtrunA17_Chr1g0183651 43.750 80 44 1 9 87 318 397 1.82e-12 67.8
Msa0518850 MtrunA17_Chr2g0299781 37.864 103 61 2 9 108 320 422 2.15e-12 67.4
Msa0518850 MtrunA17_Chr8g0381821 35.849 106 64 3 8 109 158 263 2.44e-12 66.6
Msa0518850 MtrunA17_Chr4g0062221 29.134 127 85 3 149 270 7 133 2.68e-12 63.9
Msa0518850 MtrunA17_Chr8g0380661 33.981 103 64 3 9 107 156 258 2.81e-12 66.2
Msa0518850 MtrunA17_Chr5g0426521 35.294 102 62 2 10 107 160 261 4.43e-12 65.9
Msa0518850 MtrunA17_Chr4g0051191 36.719 128 54 6 6 113 314 434 6.28e-12 65.9
Msa0518850 MtrunA17_Chr1g0167351 39.216 102 57 3 9 106 310 410 6.47e-12 65.9
Msa0518850 MtrunA17_Chr1g0167311 40.196 102 55 4 9 106 315 414 8.03e-12 65.5
Msa0518850 MtrunA17_Chr1g0187581 38.235 102 58 3 9 106 316 416 1.21e-11 65.1
Msa0518850 MtrunA17_Chr1g0153321 41.176 102 55 3 9 106 308 408 1.64e-11 64.7
Msa0518850 MtrunA17_Chr4g0033601 29.808 104 70 2 154 255 6 108 2.79e-11 60.8
Msa0518850 MtrunA17_Chr2g0321841 35.577 104 63 2 4 106 158 258 3.01e-11 64.3
Msa0518850 MtrunA17_Chr1g0185001 29.008 131 91 1 142 270 1 131 3.26e-11 60.5
Msa0518850 MtrunA17_Chr7g0258051 30.400 125 72 4 4 117 170 290 3.32e-11 63.9
Msa0518850 MtrunA17_Chr7g0261491 42.500 80 45 1 9 87 318 397 3.77e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518850 AT1G35670.1 81.061 264 50 0 8 271 186 449 5.94e-159 452
Msa0518850 AT4G09570.1 81.061 264 50 0 8 271 185 448 2.72e-158 451
Msa0518850 AT5G23580.1 76.493 268 63 0 4 271 178 445 1.75e-154 441
Msa0518850 AT5G04870.1 75.000 268 67 0 4 271 306 573 1.33e-151 438
Msa0518850 AT3G10660.2 74.254 268 69 0 4 271 342 609 9.03e-150 434
Msa0518850 AT3G10660.1 74.254 268 69 0 4 271 342 609 9.03e-150 434
Msa0518850 AT4G38230.1 72.761 268 73 0 4 271 36 303 2.76e-146 415
Msa0518850 AT4G38230.4 72.761 268 73 0 4 271 180 447 8.32e-145 416
Msa0518850 AT4G38230.3 72.761 268 73 0 4 271 180 447 8.32e-145 416
Msa0518850 AT4G38230.2 72.761 268 73 0 4 271 210 477 2.20e-144 416
Msa0518850 AT2G38910.1 72.388 268 74 0 4 271 290 557 4.85e-144 418
Msa0518850 AT2G17290.1 71.642 268 76 0 4 271 241 508 1.28e-142 413
Msa0518850 AT2G17290.2 71.642 268 76 0 4 271 241 508 1.28e-142 413
Msa0518850 AT4G35310.2 70.896 268 78 0 4 271 253 520 1.08e-141 411
Msa0518850 AT4G35310.1 70.896 268 78 0 4 271 253 520 1.08e-141 411
Msa0518850 AT5G19360.1 64.684 269 94 1 4 271 224 492 1.45e-125 369
Msa0518850 AT5G12180.1 63.941 269 96 1 4 271 229 497 7.66e-125 367
Msa0518850 AT1G76040.1 62.825 269 98 2 4 271 30 297 6.63e-124 357
Msa0518850 AT1G76040.4 62.825 269 98 2 4 271 30 297 6.63e-124 357
Msa0518850 AT1G50700.1 63.060 268 98 1 5 271 230 497 1.09e-122 361
Msa0518850 AT4G23650.1 63.534 266 96 1 6 270 236 501 2.52e-122 360
Msa0518850 AT3G20410.2 62.454 269 100 1 4 271 247 515 5.64e-122 360
Msa0518850 AT3G20410.1 62.454 269 100 1 4 271 247 515 5.64e-122 360
Msa0518850 AT4G04720.2 63.941 269 95 2 4 271 236 503 7.43e-122 359
Msa0518850 AT4G04720.1 63.941 269 95 2 4 271 236 503 7.43e-122 359
Msa0518850 AT1G76040.2 62.825 269 98 2 4 271 268 535 4.97e-121 358
Msa0518850 AT4G21940.1 61.338 269 102 2 4 271 258 525 2.75e-120 356
Msa0518850 AT4G21940.2 61.338 269 102 2 4 271 258 525 3.89e-120 356
Msa0518850 AT1G50700.2 57.483 294 98 2 5 271 230 523 7.53e-117 347
Msa0518850 AT1G61950.1 59.851 269 107 1 4 271 255 523 5.91e-115 342
Msa0518850 AT1G76040.3 65.126 238 82 1 4 241 268 504 1.62e-111 332
Msa0518850 AT4G04740.2 59.259 270 108 2 4 272 225 493 1.93e-110 330
Msa0518850 AT1G50700.3 64.255 235 84 0 5 239 230 464 3.61e-110 328
Msa0518850 AT4G04740.4 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G04740.6 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G04740.5 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G04740.3 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G04740.1 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G04740.7 59.108 269 108 2 4 271 225 492 7.91e-110 328
Msa0518850 AT4G21940.3 63.559 236 85 1 4 239 258 492 1.38e-108 324
Msa0518850 AT3G51850.2 52.365 296 137 2 4 295 210 505 5.19e-106 318
Msa0518850 AT5G12480.2 55.431 267 118 1 4 270 121 386 8.50e-105 313
Msa0518850 AT3G51850.1 55.762 269 117 1 4 270 210 478 6.70e-104 313
Msa0518850 AT5G12480.1 55.431 267 118 1 4 270 215 480 2.28e-103 312
Msa0518850 AT4G04710.3 58.801 267 101 3 6 271 184 442 6.36e-103 309
Msa0518850 AT4G04710.2 58.801 267 101 3 6 271 198 456 8.42e-103 309
Msa0518850 AT4G04710.1 57.664 274 106 3 6 271 198 469 5.35e-102 308
Msa0518850 AT1G18890.1 56.180 267 115 2 6 270 221 487 3.63e-101 307
Msa0518850 AT1G74740.1 55.762 269 117 2 4 270 215 483 1.04e-100 306
Msa0518850 AT4G04710.4 57.246 276 106 4 6 271 198 471 4.06e-100 303
Msa0518850 AT3G57530.1 53.358 268 124 1 4 270 219 486 5.75e-99 301
Msa0518850 AT5G19450.2 54.104 268 120 2 4 270 213 478 1.83e-98 300
Msa0518850 AT5G19450.1 54.104 268 120 2 4 270 213 478 1.83e-98 300
Msa0518850 AT4G04695.1 55.019 269 119 2 4 271 188 455 4.02e-98 297
Msa0518850 AT2G35890.2 61.261 222 85 1 4 224 288 509 2.34e-93 286
Msa0518850 AT2G35890.1 61.261 222 85 1 4 224 288 509 2.34e-93 286
Msa0518850 AT2G41860.1 54.878 246 111 0 4 249 210 455 7.11e-92 283
Msa0518850 AT2G41860.2 54.918 244 110 0 6 249 212 455 1.18e-91 282
Msa0518850 AT4G04700.1 52.045 269 127 2 4 271 188 455 1.18e-90 278
Msa0518850 AT2G31500.1 49.393 247 125 0 3 249 221 467 4.85e-88 274
Msa0518850 AT3G51850.3 56.373 204 89 0 4 207 210 413 1.52e-79 247
Msa0518850 AT3G57530.2 56.853 197 85 0 4 200 219 415 1.28e-76 240
Msa0518850 AT2G17890.1 42.491 273 146 3 6 271 268 536 4.68e-74 238
Msa0518850 AT5G66210.3 43.820 267 141 3 6 263 222 488 2.70e-70 226
Msa0518850 AT5G66210.1 42.857 273 147 3 6 271 222 492 5.16e-70 226
Msa0518850 AT5G66210.2 42.857 273 147 3 6 271 222 492 5.16e-70 226
Msa0518850 AT5G66210.5 44.177 249 132 2 6 247 222 470 8.55e-70 224
Msa0518850 AT4G36070.1 42.570 249 136 2 6 247 231 479 5.91e-69 223
Msa0518850 AT4G36070.2 42.570 249 136 2 6 247 231 479 7.49e-69 224
Msa0518850 AT3G50530.1 39.300 257 147 4 4 255 308 560 3.83e-58 196
Msa0518850 AT3G50530.2 39.300 257 147 4 4 255 339 591 4.76e-58 197
Msa0518850 AT5G66210.6 46.667 195 103 1 6 199 222 416 9.92e-57 189
Msa0518850 AT5G66210.4 46.667 195 103 1 6 199 222 416 9.92e-57 189
Msa0518850 AT1G49580.1 38.400 250 149 2 4 248 310 559 9.45e-54 185
Msa0518850 AT2G41140.1 36.576 257 154 4 4 255 283 535 2.76e-51 177
Msa0518850 AT3G19100.1 38.000 250 149 3 4 248 304 552 2.86e-51 178
Msa0518850 AT5G24430.1 37.805 246 145 4 6 246 305 547 1.49e-50 176
Msa0518850 AT3G56760.1 35.798 257 156 4 4 255 284 536 6.97e-50 174
Msa0518850 AT3G49370.1 37.398 246 146 4 6 246 304 546 1.50e-49 173
Msa0518850 AT2G46700.2 36.290 248 151 3 4 246 122 367 9.20e-47 162
Msa0518850 AT2G46700.3 36.290 248 151 3 4 246 122 367 9.20e-47 162
Msa0518850 AT2G46700.1 36.290 248 151 3 4 246 303 548 4.89e-45 161
Msa0518850 AT1G12580.1 55.340 103 46 0 4 106 200 302 7.51e-31 121
Msa0518850 AT1G08650.1 49.038 104 52 1 4 106 170 273 1.34e-29 114
Msa0518850 AT1G12680.1 50.000 104 52 0 4 107 253 356 9.75e-27 109
Msa0518850 AT1G08650.2 47.475 99 51 1 4 101 170 268 5.72e-26 104
Msa0518850 AT3G04530.1 44.037 109 60 1 1 108 163 271 1.88e-25 102
Msa0518850 AT3G56800.1 34.848 132 83 2 142 270 1 132 6.58e-19 82.0
Msa0518850 AT2G41110.1 34.848 132 83 2 142 270 1 132 6.58e-19 82.0
Msa0518850 AT2G27030.1 34.848 132 83 2 142 270 1 132 6.58e-19 82.0
Msa0518850 AT2G27030.3 34.848 132 83 2 142 270 1 132 7.17e-19 82.8
Msa0518850 AT3G43810.2 34.091 132 84 2 142 270 1 132 7.86e-19 83.6
Msa0518850 AT5G21274.1 34.091 132 84 2 142 270 1 132 1.06e-18 81.6
Msa0518850 AT3G43810.1 34.091 132 84 2 142 270 1 132 1.35e-18 81.3
Msa0518850 AT4G30960.1 43.269 104 53 4 5 106 179 278 1.64e-18 85.9
Msa0518850 AT1G30270.3 41.441 111 59 4 5 113 90 196 1.73e-18 85.1
Msa0518850 AT1G30270.1 41.441 111 59 4 5 113 187 293 2.64e-18 85.1
Msa0518850 AT1G66410.1 34.091 132 84 2 142 270 1 132 2.66e-18 80.5
Msa0518850 AT5G37780.1 34.091 132 84 2 142 270 1 132 2.66e-18 80.5
Msa0518850 AT1G30270.2 41.441 111 59 4 5 113 187 293 3.17e-18 85.1
Msa0518850 AT5G10930.1 39.316 117 60 4 10 119 173 285 1.41e-17 83.2
Msa0518850 AT1G48260.2 42.593 108 54 3 5 109 82 184 1.70e-16 79.3
Msa0518850 AT1G48260.4 42.593 108 54 3 5 109 82 184 1.70e-16 79.3
Msa0518850 AT1G48260.3 42.593 108 54 3 5 109 82 184 1.70e-16 79.3
Msa0518850 AT1G48260.5 42.593 108 54 3 5 109 82 184 1.70e-16 79.3
Msa0518850 AT1G48260.1 42.593 108 54 3 5 109 167 269 1.96e-16 79.7
Msa0518850 AT2G30360.1 35.238 105 62 3 5 107 178 278 3.65e-16 79.0
Msa0518850 AT5G25110.1 40.000 105 57 3 11 113 204 304 4.09e-16 79.0
Msa0518850 AT2G41110.2 31.944 144 83 3 142 270 1 144 4.35e-16 74.7
Msa0518850 AT5G35410.2 42.857 105 52 5 4 105 164 263 4.62e-16 78.2
Msa0518850 AT5G35410.1 42.857 105 52 5 4 105 164 263 5.65e-16 78.2
Msa0518850 AT5G21326.1 39.423 104 57 3 5 106 169 268 1.17e-15 77.4
Msa0518850 AT5G58380.1 37.500 104 59 3 5 106 167 266 1.30e-15 77.4
Msa0518850 AT5G62310.1 48.936 94 38 3 9 97 943 1031 1.31e-15 77.8
Msa0518850 AT2G26980.1 41.905 105 55 4 11 113 176 276 1.40e-15 76.6
Msa0518850 AT2G26980.4 41.905 105 55 4 11 113 186 286 1.43e-15 77.0
Msa0518850 AT2G26980.5 41.905 105 55 4 11 113 176 276 1.46e-15 77.0
Msa0518850 AT1G45160.2 40.000 110 53 4 5 106 851 955 1.49e-15 77.8
Msa0518850 AT3G01090.3 45.361 97 47 2 11 105 178 270 1.70e-15 77.0
Msa0518850 AT3G01090.1 45.361 97 47 2 11 105 178 270 1.70e-15 77.0
Msa0518850 AT3G01090.2 45.361 97 47 2 11 105 201 293 1.72e-15 77.0
Msa0518850 AT2G26980.3 41.905 105 55 4 11 113 176 276 1.79e-15 76.6
Msa0518850 AT1G45160.1 40.000 110 53 4 5 106 851 955 1.83e-15 77.4
Msa0518850 AT5G39440.1 42.708 96 50 2 11 105 178 269 1.94e-15 77.0
Msa0518850 AT2G25880.2 37.255 102 61 2 9 109 148 247 2.61e-15 74.7
Msa0518850 AT2G25880.1 37.255 102 61 2 9 109 180 279 3.86e-15 74.7
Msa0518850 AT4G32830.1 39.216 102 59 2 9 109 186 285 3.88e-15 74.7
Msa0518850 AT2G25880.4 37.255 102 61 2 9 109 193 292 4.33e-15 74.7
Msa0518850 AT3G22930.1 34.109 129 82 2 145 270 27 155 4.73e-15 72.0
Msa0518850 AT2G25880.3 37.255 102 61 2 9 109 241 340 8.03e-15 74.3
Msa0518850 AT4G14640.1 34.375 128 81 2 146 270 6 133 8.55e-15 70.9
Msa0518850 AT5G37780.2 30.612 147 84 3 142 270 1 147 1.09e-14 70.9
Msa0518850 AT1G01140.2 40.816 98 54 3 11 106 181 276 1.12e-14 74.3
Msa0518850 AT5G21222.1 40.196 102 55 3 10 109 174 271 1.12e-14 74.7
Msa0518850 AT5G21222.2 40.196 102 55 3 10 109 174 271 1.12e-14 74.7
Msa0518850 AT5G21222.4 40.196 102 55 3 10 109 174 271 1.12e-14 74.7
Msa0518850 AT5G21222.3 40.196 102 55 3 10 109 174 271 1.12e-14 74.7
Msa0518850 AT5G01810.1 35.577 104 61 2 5 106 167 266 1.41e-14 73.9
Msa0518850 AT5G01810.2 35.577 104 61 2 5 106 167 266 1.41e-14 73.9
Msa0518850 AT4G18700.1 36.538 104 60 4 5 106 181 280 1.41e-14 74.3
Msa0518850 AT1G32250.1 32.609 138 84 3 142 270 5 142 1.62e-14 70.5
Msa0518850 AT2G34180.1 36.893 103 59 3 5 105 212 310 1.88e-14 73.9
Msa0518850 AT5G01810.3 35.577 104 61 2 5 106 167 266 2.28e-14 73.2
Msa0518850 AT3G29160.1 30.769 195 110 5 11 198 179 355 2.61e-14 73.6
Msa0518850 AT3G29160.2 30.769 195 110 5 11 198 179 355 2.61e-14 73.6
Msa0518850 AT3G50360.1 34.167 120 76 2 154 270 28 147 3.26e-14 69.7
Msa0518850 AT5G45820.1 35.577 104 61 3 5 106 167 266 3.35e-14 73.2
Msa0518850 AT5G57630.3 38.235 102 57 3 2 101 73 170 4.20e-14 72.0
Msa0518850 AT2G41100.7 28.571 133 77 2 140 254 53 185 4.55e-14 71.6
Msa0518850 AT2G41100.6 28.571 133 77 2 140 254 53 185 4.55e-14 71.6
Msa0518850 AT2G41100.3 28.571 133 77 2 140 254 53 185 4.55e-14 71.6
Msa0518850 AT1G01140.3 39.423 104 57 4 5 106 175 274 5.42e-14 72.4
Msa0518850 AT3G29160.3 43.299 97 49 2 11 105 179 271 5.43e-14 72.0
Msa0518850 AT1G29230.1 39.175 97 53 4 11 105 235 327 5.58e-14 72.4
Msa0518850 AT1G01140.1 39.423 104 57 4 5 106 175 274 5.79e-14 72.4
Msa0518850 AT2G25090.1 38.776 98 54 4 11 106 185 278 5.99e-14 72.4
Msa0518850 AT5G57630.1 38.235 102 57 3 2 101 161 258 6.15e-14 72.0
Msa0518850 AT4G14640.3 35.922 103 65 1 146 247 6 108 6.26e-14 67.8
Msa0518850 AT2G45490.1 33.333 102 65 2 9 109 177 276 6.68e-14 71.2
Msa0518850 AT2G41100.4 28.571 133 77 2 140 254 88 220 7.63e-14 71.2
Msa0518850 AT2G41100.4 27.703 148 88 3 142 270 1 148 8.43e-12 65.5
Msa0518850 AT2G41100.1 28.571 133 77 2 140 254 88 220 7.63e-14 71.2
Msa0518850 AT2G41100.1 27.703 148 88 3 142 270 1 148 8.43e-12 65.5
Msa0518850 AT5G57630.2 38.235 102 57 3 2 101 161 258 7.72e-14 71.6
Msa0518850 AT4G24400.2 40.187 107 58 4 5 109 163 265 7.76e-14 72.0
Msa0518850 AT5G08590.1 33.871 124 76 3 8 127 158 279 8.11e-14 71.6
Msa0518850 AT5G08590.2 33.871 124 76 3 8 127 82 203 8.20e-14 70.9
Msa0518850 AT5G45810.1 36.538 104 60 4 5 106 183 282 8.72e-14 72.0
Msa0518850 AT4G24400.1 40.187 107 58 4 5 109 163 265 1.09e-13 71.6
Msa0518850 AT3G17510.2 38.462 104 56 4 5 105 96 194 1.54e-13 70.9
Msa0518850 AT3G17510.1 38.462 104 56 4 5 105 176 274 1.70e-13 70.9
Msa0518850 AT1G66410.2 31.690 142 84 3 142 270 1 142 1.75e-13 67.4
Msa0518850 AT1G03920.1 41.584 101 56 3 9 106 335 435 2.18e-13 70.9
Msa0518850 AT1G03920.3 41.584 101 56 3 9 106 335 435 2.18e-13 70.9
Msa0518850 AT3G22930.2 34.951 103 66 1 145 246 27 129 2.76e-13 66.2
Msa0518850 AT1G03920.2 41.584 101 56 3 9 106 222 322 2.89e-13 70.1
Msa0518850 AT5G37780.3 28.481 158 84 3 142 270 1 158 3.13e-13 67.0
Msa0518850 AT1G05990.1 33.600 125 73 3 154 270 6 128 3.29e-13 66.6
Msa0518850 AT4G33080.2 40.385 104 58 2 9 108 301 404 6.36e-13 69.3
Msa0518850 AT4G33080.1 40.385 104 58 2 9 108 301 404 6.88e-13 69.3
Msa0518850 AT1G30640.3 39.216 102 57 3 9 106 230 330 9.03e-13 68.9
Msa0518850 AT1G30640.2 39.216 102 57 3 9 106 323 423 1.09e-12 68.6
Msa0518850 AT1G30640.1 39.216 102 57 3 9 106 323 423 1.09e-12 68.6
Msa0518850 AT2G26980.2 44.706 85 41 4 11 93 176 256 1.46e-12 67.0
Msa0518850 AT3G61960.1 35.849 106 66 2 11 114 171 276 2.33e-12 67.8
Msa0518850 AT5G37780.4 33.333 117 70 3 157 270 8 119 2.50e-12 63.5
Msa0518850 AT3G61960.2 35.849 106 66 2 11 114 171 276 2.78e-12 67.4
Msa0518850 AT1G78290.3 36.538 104 62 3 10 109 160 263 2.87e-12 66.6
Msa0518850 AT1G78290.2 36.538 104 62 3 10 109 160 263 2.87e-12 66.6
Msa0518850 AT3G17850.1 41.053 95 46 3 9 98 1071 1160 3.57e-12 67.4
Msa0518850 AT1G10940.2 33.962 106 66 2 8 109 166 271 3.59e-12 66.6
Msa0518850 AT1G60940.1 33.962 106 66 2 8 109 158 263 3.94e-12 66.6
Msa0518850 AT1G60940.2 33.962 106 66 2 8 109 158 263 3.94e-12 66.6
Msa0518850 AT1G10940.1 33.962 106 66 2 8 109 158 263 4.28e-12 66.2
Msa0518850 AT5G09890.1 40.196 102 56 3 9 106 304 404 4.54e-12 66.6
Msa0518850 AT5G09890.2 40.196 102 56 3 9 106 304 404 4.63e-12 66.6
Msa0518850 AT3G59440.1 29.825 114 80 0 154 267 52 165 5.47e-12 63.9
Msa0518850 AT1G48490.3 41.053 95 46 3 9 98 1011 1100 6.24e-12 66.6
Msa0518850 AT1G48490.2 41.053 95 46 3 9 98 1011 1100 6.24e-12 66.6
Msa0518850 AT1G48490.1 41.053 95 46 3 9 98 1011 1100 6.24e-12 66.6
Msa0518850 AT1G48490.4 41.053 95 46 3 9 98 1012 1101 6.24e-12 66.6
Msa0518850 AT5G63650.1 33.962 106 66 2 8 109 158 263 7.79e-12 65.5
Msa0518850 AT4G40010.1 36.893 103 61 2 9 107 159 261 9.70e-12 65.1
Msa0518850 AT2G23030.1 32.381 105 67 2 9 109 159 263 1.67e-11 64.3
Msa0518850 AT3G23310.1 39.216 102 57 3 9 106 321 421 2.65e-11 64.3
Msa0518850 AT4G14640.2 34.579 107 67 2 167 270 9 115 3.03e-11 60.5
Msa0518850 AT5G01820.1 36.538 104 60 3 5 106 177 276 3.04e-11 63.9
Msa0518850 AT4G37010.2 30.833 120 80 2 154 270 32 151 3.25e-11 61.2
Msa0518850 AT4G37010.1 30.833 120 80 2 154 270 28 147 3.27e-11 61.2
Msa0518850 AT4G14350.3 38.235 102 58 3 9 106 318 418 4.71e-11 63.5
Msa0518850 AT4G14350.2 38.235 102 58 3 9 106 318 418 5.27e-11 63.5
Msa0518850 AT4G14350.1 38.235 102 58 3 9 106 318 418 5.27e-11 63.5
Msa0518850 AT4G14350.4 38.235 102 58 3 9 106 318 418 5.27e-11 63.5
Msa0518850 AT2G43290.1 31.481 108 68 1 154 255 66 173 5.46e-11 61.6
Msa0518850 AT4G03290.1 33.019 106 67 2 154 255 6 111 5.49e-11 60.5
Msa0518850 AT3G43810.4 33.333 96 61 2 178 270 1 96 5.53e-11 59.3
Msa0518850 AT3G43810.3 33.333 96 61 2 178 270 1 96 5.53e-11 59.3
Msa0518850 AT2G20470.3 42.500 80 45 1 9 87 321 400 6.09e-11 63.5
Msa0518850 AT2G20470.2 42.500 80 45 1 9 87 321 400 6.85e-11 63.2
Msa0518850 AT2G20470.1 42.500 80 45 1 9 87 321 400 6.85e-11 63.2

Find 93 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCACCAAATAATTATTTA+AGG 0.139372 3_4:-70741766 None:intergenic
TCGTTTCATGACAAACATTT+TGG 0.142292 3_4:-70741909 None:intergenic
TTAAGGTACAATAACTTAAT+TGG 0.163697 3_4:-70741749 None:intergenic
TTATTTGGTGATACAAATTT+TGG 0.177909 3_4:+70741776 Msa0518850:three_prime_UTR
TAAGCGGGGTTCCTCCGTTC+TGG 0.183304 3_4:+70739076 Msa0518850:CDS
TCCAAGGAAAACTTGATTTC+CGG 0.230911 3_4:+70739264 Msa0518850:CDS
CTATTAATAAAGACAAATTT+TGG 0.237598 3_4:-70741847 None:intergenic
CAGGATGGACAGATAGATTA+TGG 0.239141 3_4:+70741622 Msa0518850:intron
TTGTACCTTAAATAATTATT+TGG 0.249050 3_4:+70741761 Msa0518850:three_prime_UTR
TTCCGGTCTGAGCCATGGCC+TGG 0.273827 3_4:+70739281 Msa0518850:CDS
ACCTCTGGCGCAACATAGTA+TGG 0.300372 3_4:-70738988 None:intergenic
GTCTGAAATCAAGGATCTTA+TGG 0.315370 3_4:+70741094 Msa0518850:CDS
AAACGAACCACAACACAAAT+TGG 0.317258 3_4:+70741926 Msa0518850:three_prime_UTR
AGAGATGCTCTTGGAATCAT+AGG 0.326999 3_4:+70741718 Msa0518850:three_prime_UTR
CAAGCAGCTTGTAAAGAGTT+TGG 0.331886 3_4:+70741390 Msa0518850:CDS
AAGCGGGGTTCCTCCGTTCT+GGG 0.365131 3_4:+70739077 Msa0518850:CDS
GCGAGTAGGATCTGAACTTA+TGG 0.366687 3_4:+70741070 Msa0518850:CDS
GCACTCCACACGTCTGCTTC+AGG 0.368805 3_4:-70739030 None:intergenic
GTGGTTTGAAGGAGTTGTTC+AGG 0.370841 3_4:+70740988 Msa0518850:CDS
AATAACGGGACACTCGACTA+TGG 0.387377 3_4:+70741252 Msa0518850:CDS
GCAGAATCAAGAGGTTTATC+TGG 0.395849 3_4:-70739499 None:intergenic
CTTAATTTCAGAGATGCTCT+TGG 0.398320 3_4:+70741709 Msa0518850:exon
GATTAATTCGAACATTTGTA+TGG 0.402587 3_4:+70741951 Msa0518850:three_prime_UTR
AGAAAGGGAAATGGTGGGAT+TGG 0.421767 3_4:+70741664 Msa0518850:CDS
TCCGGTCTGAGCCATGGCCT+GGG 0.435033 3_4:+70739282 Msa0518850:CDS
ACCATTTCCCTTTCTCATCA+TGG 0.441065 3_4:-70741656 None:intergenic
TCATCGCAGAGAACTGCTTC+AGG 0.449806 3_4:-70739534 None:intergenic
AGGGAAATGGTGGGATTGGA+AGG 0.456027 3_4:+70741668 Msa0518850:CDS
TTCTCATACTTTGACAAAGA+TGG 0.461712 3_4:+70741339 Msa0518850:CDS
GTCGTAGATACTTGAGTCTC+TGG 0.467705 3_4:+70742016 Msa0518850:three_prime_UTR
AGGATGGACAGATAGATTAT+GGG 0.471913 3_4:+70741623 Msa0518850:intron
GAGGTCTTGCACAAGCATTA+TGG 0.472688 3_4:+70739006 Msa0518850:CDS
GGAAGAAATCGGTGGTTTGA+AGG 0.472947 3_4:+70740977 Msa0518850:CDS
GAAGCAGACGTGTGGAGTGC+TGG 0.476693 3_4:+70739033 Msa0518850:CDS
AGAAAACTAAGATTCATTCA+AGG 0.476758 3_4:-70742098 None:intergenic
AGGCAGATATTGATAATAAC+GGG 0.478956 3_4:+70741238 Msa0518850:intron
TAATGCTTGTGCAAGACCTC+TGG 0.481063 3_4:-70739003 None:intergenic
ATGTTATCATCGACAATCCA+TGG 0.482466 3_4:-70739472 None:intergenic
AATAGTCAAGGAAATTGATC+AGG 0.491177 3_4:+70741437 Msa0518850:CDS
ACTTATGGAGTCTGAAATCA+AGG 0.499535 3_4:+70741085 Msa0518850:CDS
GGGGTTCCTCCGTTCTGGGC+CGG 0.499712 3_4:+70739081 Msa0518850:CDS
TTTCTGTGTCAGGTCACCCA+TGG 0.507791 3_4:+70739455 Msa0518850:intron
CTCTTGGAATCATAGGCAAT+GGG 0.508398 3_4:+70741725 Msa0518850:three_prime_UTR
ATTTGCTGCCATGATGAGAA+AGG 0.511800 3_4:+70741648 Msa0518850:CDS
CTTAAATAAGCTGGAGAGAG+AGG 0.512244 3_4:+70741299 Msa0518850:CDS
AAATTTGTCTGAAAATCCCT+TGG 0.512913 3_4:-70739241 None:intergenic
CAGGCAGATATTGATAATAA+CGG 0.514142 3_4:+70741237 Msa0518850:intron
GAAATCTTTAGTGATGTTGT+TGG 0.515469 3_4:+70738961 Msa0518850:CDS
TACTGTGCACTTAAATAAGC+TGG 0.515783 3_4:+70741290 Msa0518850:CDS
ATGCTTGATGCTGATAATAG+TGG 0.517517 3_4:+70741011 Msa0518850:CDS
AGGCTTTCTGAGGAAGAAAT+CGG 0.517602 3_4:+70740966 Msa0518850:CDS
TACTTTGACAAAGATGGTAG+TGG 0.526154 3_4:+70741345 Msa0518850:CDS
TAATCCGCCAATTTGTGTTG+TGG 0.527384 3_4:-70741933 None:intergenic
ACATTTGTATGGTGTAGAAA+AGG 0.531508 3_4:+70741962 Msa0518850:three_prime_UTR
ACATTGGAAGAGTTAAAAGA+AGG 0.535574 3_4:+70741041 Msa0518850:CDS
GAAAACTAAGATTCATTCAA+GGG 0.536138 3_4:-70742097 None:intergenic
TTGATTTCCGGTCTGAGCCA+TGG 0.538259 3_4:+70739276 Msa0518850:CDS
TACTTATTCATAGGTTATTG+CGG 0.539341 3_4:+70740941 Msa0518850:intron
GAAATTAAGTGTGCTTGTCA+TGG 0.542134 3_4:-70741695 None:intergenic
TAATAGTGGAACTATAACAT+TGG 0.547061 3_4:+70741025 Msa0518850:CDS
GCTCTTGGAATCATAGGCAA+TGG 0.547759 3_4:+70741724 Msa0518850:three_prime_UTR
GAGAGAGGAAAATCTGTTGT+CGG 0.550846 3_4:+70741314 Msa0518850:CDS
TTGTCTGAAAATCCCTTGGT+CGG 0.556820 3_4:-70739237 None:intergenic
CTGTCTGAAATCCCAGGCCA+TGG 0.558298 3_4:-70739293 None:intergenic
TAACTTTCAACATTATCAGT+AGG 0.563894 3_4:+70741819 Msa0518850:three_prime_UTR
TCCCAGGCCATGGCTCAGAC+CGG 0.564681 3_4:-70739283 None:intergenic
TTTGCTGCCATGATGAGAAA+GGG 0.567288 3_4:+70741649 Msa0518850:CDS
TTGGCACTGTCTGAAATCCC+AGG 0.570546 3_4:-70739299 None:intergenic
CCTTGACTATTTCATCAATG+TGG 0.578652 3_4:-70741425 None:intergenic
GCCATGATGAGAAAGGGAAA+TGG 0.581983 3_4:+70741655 Msa0518850:CDS
TCCATACTATGTTGCGCCAG+AGG 0.584682 3_4:+70738987 Msa0518850:CDS
CGAACCACAACACAAATTGG+CGG 0.592693 3_4:+70741929 Msa0518850:three_prime_UTR
ACTTGTACCACACACCATGA+TGG 0.599174 3_4:-70741995 None:intergenic
CCACATTGATGAAATAGTCA+AGG 0.599431 3_4:+70741425 Msa0518850:CDS
GATAAGACAGCAGAATCAAG+AGG 0.600172 3_4:-70739508 None:intergenic
AGCTGCTTGAATCTCGTCGA+TGG 0.603722 3_4:-70741376 None:intergenic
AGATAGATACCGGCCCAGAA+CGG 0.619065 3_4:-70739090 None:intergenic
CTTTCTGAGGAAGAAATCGG+TGG 0.621226 3_4:+70740969 Msa0518850:CDS
ATGATGAGAAAGGGAAATGG+TGG 0.623759 3_4:+70741658 Msa0518850:CDS
TATTGCGGAGAGGCTTTCTG+AGG 0.626593 3_4:+70740956 Msa0518850:CDS
CCACCTACAGAGACCGACCA+AGG 0.627016 3_4:+70739224 Msa0518850:intron
GGATGGACAGATAGATTATG+GGG 0.631359 3_4:+70741624 Msa0518850:intron
AAAGAAGGCTTAAAGCGAGT+AGG 0.631853 3_4:+70741056 Msa0518850:CDS
ATTCATAGGTTATTGCGGAG+AGG 0.635091 3_4:+70740946 Msa0518850:intron
TTTGTACATCTTATTAAGCG+GGG 0.639732 3_4:+70739062 Msa0518850:CDS
TGTTATCATCGACAATCCAT+GGG 0.640125 3_4:-70739471 None:intergenic
AAGGACGAGAATAACCATCA+TGG 0.640312 3_4:+70741981 Msa0518850:three_prime_UTR
TGGGATTTCAGACAGTGCCA+AGG 0.650757 3_4:+70739301 Msa0518850:CDS
TAGATACCGGCCCAGAACGG+AGG 0.656522 3_4:-70739087 None:intergenic
ATGGACCTGAAGCAGACGTG+TGG 0.657874 3_4:+70739025 Msa0518850:CDS
TGATGAGAAAGGGAAATGGT+GGG 0.663749 3_4:+70741659 Msa0518850:CDS
CACCTACAGAGACCGACCAA+GGG 0.669451 3_4:+70739225 Msa0518850:intron
AGAATAACCATCATGGTGTG+TGG 0.683812 3_4:+70741988 Msa0518850:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGGATATAATTAAATAAAT+TGG - chr3_4:70739859-70739878 None:intergenic 10.0%
!! AATTTATTTAATTATATCCA+TGG + chr3_4:70739858-70739877 Msa0518850:intron 10.0%
!! ATTTATTTAATTATATCCAT+GGG + chr3_4:70739859-70739878 Msa0518850:intron 10.0%
!!! AATTGTCAATTTTATAATTA+GGG - chr3_4:70741187-70741206 None:intergenic 10.0%
!! ATTTCCAATTGATTATAAAT+CGG + chr3_4:70738341-70738360 Msa0518850:intron 15.0%
!!! TTAAAATCAAACTTTGTTTT+TGG + chr3_4:70738411-70738430 Msa0518850:intron 15.0%
!! TTTAATGAAAAAAAATGAAG+CGG + chr3_4:70738640-70738659 Msa0518850:intron 15.0%
!!! TAGGCTTATTTTTTATTTAT+TGG + chr3_4:70739609-70739628 Msa0518850:intron 15.0%
!!! TTGTTTAATTTTCTTTCTTT+GGG - chr3_4:70740402-70740421 None:intergenic 15.0%
!!! ATATAGTTTGTTATTGTTTT+AGG + chr3_4:70741129-70741148 Msa0518850:intron 15.0%
!!! CAATTGTCAATTTTATAATT+AGG - chr3_4:70741188-70741207 None:intergenic 15.0%
!! CTAATTATAAAATTGACAAT+TGG + chr3_4:70741186-70741205 Msa0518850:intron 15.0%
!! TTGTACCTTAAATAATTATT+TGG + chr3_4:70741761-70741780 Msa0518850:three_prime_UTR 15.0%
!! TATCACCAAATAATTATTTA+AGG - chr3_4:70741769-70741788 None:intergenic 15.0%
!!! CTATTAATAAAGACAAATTT+TGG - chr3_4:70741850-70741869 None:intergenic 15.0%
!!! TCATTCTAAAATGTTTTTTT+TGG + chr3_4:70741875-70741894 Msa0518850:three_prime_UTR 15.0%
!!! TTCTCAAAACTATTGATTTT+GGG + chr3_4:70737971-70737990 Msa0518850:intron 20.0%
!! CAAAAAATAAAATACAAACC+TGG - chr3_4:70738015-70738034 None:intergenic 20.0%
!!! TTTGATAATTTATTGCATCT+GGG + chr3_4:70738082-70738101 Msa0518850:intron 20.0%
!! ATTTATTGTTCAGAATGAAA+TGG + chr3_4:70738142-70738161 Msa0518850:intron 20.0%
!!! TTTTTGTTTTTAGAGAGAAA+GGG + chr3_4:70738226-70738245 Msa0518850:intron 20.0%
!!! TATATACTAATTGTTATTGC+AGG + chr3_4:70738468-70738487 Msa0518850:intron 20.0%
!! TTAATGAAAAAAAATGAAGC+GGG + chr3_4:70738641-70738660 Msa0518850:intron 20.0%
!!! TTTTCTTTAACAGTATAATG+TGG + chr3_4:70738833-70738852 Msa0518850:intron 20.0%
!!! ATTTTGTACATCTTATTAAG+CGG + chr3_4:70739060-70739079 Msa0518850:CDS 20.0%
!! TATAAATGAAAGATAGATAC+CGG - chr3_4:70739103-70739122 None:intergenic 20.0%
!!! CTTATTTGTAAGTCTAAAAT+TGG + chr3_4:70739418-70739437 Msa0518850:intron 20.0%
!! GATGAATAAACTTAAAAAGA+TGG + chr3_4:70739552-70739571 Msa0518850:CDS 20.0%
!!! TTTAAATCGGTTTATTTGAA+CGG + chr3_4:70740256-70740275 Msa0518850:intron 20.0%
!!! GTTGTTTAATTTTCTTTCTT+TGG - chr3_4:70740403-70740422 None:intergenic 20.0%
!!! CATTGACATTTGTATTTTTT+CGG + chr3_4:70740627-70740646 Msa0518850:intron 20.0%
!! TGTTATGTATACTTATTCAT+AGG + chr3_4:70740932-70740951 Msa0518850:intron 20.0%
!! TTAAGGTACAATAACTTAAT+TGG - chr3_4:70741752-70741771 None:intergenic 20.0%
!!! TTATTTGGTGATACAAATTT+TGG + chr3_4:70741776-70741795 Msa0518850:three_prime_UTR 20.0%
!!! TTTTCAATAAACATTAGTCA+GGG - chr3_4:70742055-70742074 None:intergenic 20.0%
!!! TTTTTCAATAAACATTAGTC+AGG - chr3_4:70742056-70742075 None:intergenic 20.0%
!! GAAGATTTTCAGTTACATAA+GGG - chr3_4:70737522-70737541 None:intergenic 25.0%
! ACAAAAAATTCTCAGGTTTA+AGG - chr3_4:70737927-70737946 None:intergenic 25.0%
! GAATCAAACAAAAAATTCTC+AGG - chr3_4:70737934-70737953 None:intergenic 25.0%
!!! CTTCTCAAAACTATTGATTT+TGG + chr3_4:70737970-70737989 Msa0518850:intron 25.0%
!! GTTTGATAATTTATTGCATC+TGG + chr3_4:70738081-70738100 Msa0518850:intron 25.0%
!!! GATTTCAATCTTGTTGATTT+TGG + chr3_4:70738190-70738209 Msa0518850:intron 25.0%
!!! GTTTTTGTTTTTAGAGAGAA+AGG + chr3_4:70738225-70738244 Msa0518850:intron 25.0%
!!! CAGGAAATAGATTGATTTTA+GGG + chr3_4:70738366-70738385 Msa0518850:intron 25.0%
!! TAATTGTTATTGCAGGTTAA+TGG + chr3_4:70738475-70738494 Msa0518850:intron 25.0%
! CTATATCAAACATAGTGTAA+TGG - chr3_4:70738536-70738555 None:intergenic 25.0%
! GTGTTCAAATTAGGAAAAAA+TGG + chr3_4:70738595-70738614 Msa0518850:intron 25.0%
!! TGTACGAAGAAATAAACTTT+TGG + chr3_4:70738713-70738732 Msa0518850:intron 25.0%
!! TTTTGTACATCTTATTAAGC+GGG + chr3_4:70739061-70739080 Msa0518850:CDS 25.0%
!! ATTTTCAGACAAATTTTCCA+AGG + chr3_4:70739248-70739267 Msa0518850:CDS 25.0%
! TAATTCGAAAAATGCTTGAT+AGG + chr3_4:70739327-70739346 Msa0518850:CDS 25.0%
! AAAAATAAGCCTAATCAACA+AGG - chr3_4:70739602-70739621 None:intergenic 25.0%
!! TTTTGTGAATCTAATGCATA+AGG - chr3_4:70739724-70739743 None:intergenic 25.0%
! TTTCATTTCAAAGTGGTTAT+AGG - chr3_4:70739758-70739777 None:intergenic 25.0%
!!! TATAACCACTTTGAAATGAA+AGG + chr3_4:70739757-70739776 Msa0518850:intron 25.0%
! ATATTCCTTTCATTTCAAAG+TGG - chr3_4:70739765-70739784 None:intergenic 25.0%
! AAATATGACTAGACTTTGAA+TGG + chr3_4:70739914-70739933 Msa0518850:intron 25.0%
!!! TCAAAAGGTATTCCAAAAAT+TGG - chr3_4:70740179-70740198 None:intergenic 25.0%
! ATTTGAACGGTAATTAACTA+CGG + chr3_4:70740269-70740288 Msa0518850:intron 25.0%
!! CTCTTTTATTCCAACAAAAA+AGG - chr3_4:70740370-70740389 None:intergenic 25.0%
!!! CTTTTTTGTTGGAATAAAAG+AGG + chr3_4:70740368-70740387 Msa0518850:intron 25.0%
!!! ACATCTTAGTTTGTGAATAT+TGG + chr3_4:70740769-70740788 Msa0518850:intron 25.0%
! ATACATAACAAGAAACATCA+TGG - chr3_4:70740922-70740941 None:intergenic 25.0%
! TACTTATTCATAGGTTATTG+CGG + chr3_4:70740941-70740960 Msa0518850:intron 25.0%
!! TAATAGTGGAACTATAACAT+TGG + chr3_4:70741025-70741044 Msa0518850:CDS 25.0%
! TCACATGCAAGATTAATATA+AGG - chr3_4:70741217-70741236 None:intergenic 25.0%
!! TTACACTGTAATGATAATGT+TGG - chr3_4:70741555-70741574 None:intergenic 25.0%
! TAACTTTCAACATTATCAGT+AGG + chr3_4:70741819-70741838 Msa0518850:three_prime_UTR 25.0%
!!! AATAAAGACAAATTTTGGTC+AGG - chr3_4:70741845-70741864 None:intergenic 25.0%
! GATTAATTCGAACATTTGTA+TGG + chr3_4:70741951-70741970 Msa0518850:three_prime_UTR 25.0%
!!! TGAAAAATATTTGTTGTGAG+AGG + chr3_4:70742069-70742088 Msa0518850:three_prime_UTR 25.0%
! GAAAACTAAGATTCATTCAA+GGG - chr3_4:70742100-70742119 None:intergenic 25.0%
! AGAAAACTAAGATTCATTCA+AGG - chr3_4:70742101-70742120 None:intergenic 25.0%
! CGAAGATTTTCAGTTACATA+AGG - chr3_4:70737523-70737542 None:intergenic 30.0%
! AAGAGGATTATGATGATGTT+TGG + chr3_4:70737668-70737687 Msa0518850:intron 30.0%
! CATTTGGATTTTCAGACAAA+TGG - chr3_4:70737714-70737733 None:intergenic 30.0%
! GTTTTCTGTTCATTTGGTTA+TGG + chr3_4:70737765-70737784 Msa0518850:intron 30.0%
! GTGATTTGTGAAATGATGAA+TGG + chr3_4:70738059-70738078 Msa0518850:intron 30.0%
! TGGCTTAGTTGATTTATTTG+TGG + chr3_4:70738162-70738181 Msa0518850:intron 30.0%
GTACTAAAGAATCAAGCAAA+TGG - chr3_4:70738293-70738312 None:intergenic 30.0%
TTGCTTGATTCTTTAGTACT+TGG + chr3_4:70738294-70738313 Msa0518850:intron 30.0%
! TGGACCGATTTATAATCAAT+TGG - chr3_4:70738348-70738367 None:intergenic 30.0%
AATTGATTATAAATCGGTCC+AGG + chr3_4:70738347-70738366 Msa0518850:intron 30.0%
CCTAAAATCAATCTATTTCC+TGG - chr3_4:70738368-70738387 None:intergenic 30.0%
!! CCAGGAAATAGATTGATTTT+AGG + chr3_4:70738365-70738384 Msa0518850:intron 30.0%
!!! CTTTGTTTTTGGTTGTGTAT+TGG + chr3_4:70738422-70738441 Msa0518850:intron 30.0%
TTCCTAATTGAACAAGAACA+TGG + chr3_4:70738558-70738577 Msa0518850:intron 30.0%
TCCTAATTGAACAAGAACAT+GGG + chr3_4:70738559-70738578 Msa0518850:intron 30.0%
! TTCATTAAATGTCGCCTTTT+TGG - chr3_4:70738629-70738648 None:intergenic 30.0%
GAAATCTTTAGTGATGTTGT+TGG + chr3_4:70738961-70738980 Msa0518850:CDS 30.0%
TTTGTACATCTTATTAAGCG+GGG + chr3_4:70739062-70739081 Msa0518850:CDS 30.0%
ATACATCAAATTATCAGCTG+TGG + chr3_4:70739120-70739139 Msa0518850:intron 30.0%
ATAGCATTAGCAATGAGAAA+AGG - chr3_4:70739191-70739210 None:intergenic 30.0%
AAATTTGTCTGAAAATCCCT+TGG - chr3_4:70739244-70739263 None:intergenic 30.0%
!! CATTTTTCGAATTAGATCCT+TGG - chr3_4:70739321-70739340 None:intergenic 30.0%
!!! TGAGCTGTAAATCTTGTTTT+TGG - chr3_4:70739356-70739375 None:intergenic 30.0%
! GTATATGTGTTTTTCATGCA+TGG + chr3_4:70739795-70739814 Msa0518850:intron 30.0%
!! AGGTTTTTCCTTGATGATAA+GGG - chr3_4:70740006-70740025 None:intergenic 30.0%
! AGAAAAGCATAACAGAATGT+GGG - chr3_4:70740084-70740103 None:intergenic 30.0%
! TAGAAAAGCATAACAGAATG+TGG - chr3_4:70740085-70740104 None:intergenic 30.0%
ATGAACTTCATGAATGAGAA+AGG + chr3_4:70740121-70740140 Msa0518850:intron 30.0%
! GTATTCCAAAAATTGGCTTA+AGG - chr3_4:70740172-70740191 None:intergenic 30.0%
CCTAAAAAGCAATTGTCAAA+AGG - chr3_4:70740194-70740213 None:intergenic 30.0%
!!! CCTTTTGACAATTGCTTTTT+AGG + chr3_4:70740191-70740210 Msa0518850:intron 30.0%
AGATATGACAATTGCTCTTT+AGG - chr3_4:70740313-70740332 None:intergenic 30.0%
AAAAAAGGATGTGATGCATA+GGG - chr3_4:70740355-70740374 None:intergenic 30.0%
GTACACATTCAACAGTTAAA+AGG - chr3_4:70740433-70740452 None:intergenic 30.0%
ATGCATAAAACACAATGTTC+AGG - chr3_4:70740460-70740479 None:intergenic 30.0%
GACCTTAAAATCAGAAAAGA+AGG + chr3_4:70740481-70740500 Msa0518850:intron 30.0%
! TGCCTTCTTTTCTGATTTTA+AGG - chr3_4:70740486-70740505 None:intergenic 30.0%
TTATCATAGCAAATCAGCAA+TGG - chr3_4:70740663-70740682 None:intergenic 30.0%
ACATTGGAAGAGTTAAAAGA+AGG + chr3_4:70741041-70741060 Msa0518850:CDS 30.0%
ATATTAATCTTGCATGTGAC+AGG + chr3_4:70741218-70741237 Msa0518850:intron 30.0%
! CAGGCAGATATTGATAATAA+CGG + chr3_4:70741237-70741256 Msa0518850:intron 30.0%
! AGGCAGATATTGATAATAAC+GGG + chr3_4:70741238-70741257 Msa0518850:intron 30.0%
TTCTCATACTTTGACAAAGA+TGG + chr3_4:70741339-70741358 Msa0518850:CDS 30.0%
AATAGTCAAGGAAATTGATC+AGG + chr3_4:70741437-70741456 Msa0518850:CDS 30.0%
! TGATGAAAATTTTGTGTTGC+AGG + chr3_4:70741603-70741622 Msa0518850:intron 30.0%
! CGTTTCATGACAAACATTTT+GGG - chr3_4:70741911-70741930 None:intergenic 30.0%
! TCGTTTCATGACAAACATTT+TGG - chr3_4:70741912-70741931 None:intergenic 30.0%
ACATTTGTATGGTGTAGAAA+AGG + chr3_4:70741962-70741981 Msa0518850:three_prime_UTR 30.0%
!! AATGAATCTTAGTTTTCTCG+AGG + chr3_4:70742103-70742122 Msa0518850:three_prime_UTR 30.0%
!! ATGAATCTTAGTTTTCTCGA+GGG + chr3_4:70742104-70742123 Msa0518850:three_prime_UTR 30.0%
TTACACCTTAGGTAGAAAAC+TGG + chr3_4:70737549-70737568 Msa0518850:intron 35.0%
TACACCTTAGGTAGAAAACT+GGG + chr3_4:70737550-70737569 Msa0518850:intron 35.0%
!! TGAGATTGATTTGCAAGCAT+AGG - chr3_4:70737629-70737648 None:intergenic 35.0%
! GAAGAAGCTTTTATGCAAAG+AGG + chr3_4:70737651-70737670 Msa0518850:intron 35.0%
CTGAAAATCCAAATGTTGTG+AGG + chr3_4:70737719-70737738 Msa0518850:intron 35.0%
TTTGATAGGATTGTGCAGAA+GGG + chr3_4:70737811-70737830 Msa0518850:intron 35.0%
GTTGATTAGGACTATTGTTG+AGG + chr3_4:70737861-70737880 Msa0518850:intron 35.0%
!!! TTGTCTGTTTTTTACAAGCC+AGG + chr3_4:70737994-70738013 Msa0518850:intron 35.0%
!!! TCTTGTTGATTTTGGCTGTA+TGG + chr3_4:70738198-70738217 Msa0518850:intron 35.0%
TTAGAGAGAAAGGGATAAGA+AGG + chr3_4:70738235-70738254 Msa0518850:intron 35.0%
TAGAGAGAAAGGGATAAGAA+GGG + chr3_4:70738236-70738255 Msa0518850:intron 35.0%
TGATTCTTTAGTACTTGGAG+AGG + chr3_4:70738299-70738318 Msa0518850:intron 35.0%
GTTAATGGCATGGTTTAGTA+TGG + chr3_4:70738490-70738509 Msa0518850:intron 35.0%
AATGGTGTGTATACTCTTTG+TGG - chr3_4:70738518-70738537 None:intergenic 35.0%
TCCCATGTTCTTGTTCAATT+AGG - chr3_4:70738563-70738582 None:intergenic 35.0%
AAATGGAGATGAAGCCAAAA+AGG + chr3_4:70738612-70738631 Msa0518850:intron 35.0%
! AATGCTAGAAGTTTGAAGTC+TGG + chr3_4:70738743-70738762 Msa0518850:intron 35.0%
ATGCATTCCTGAGTATAATG+TGG + chr3_4:70738775-70738794 Msa0518850:intron 35.0%
GAATGTTCCACATTATACTC+AGG - chr3_4:70738785-70738804 None:intergenic 35.0%
ATCATTTCCGATTGATATGG+TGG - chr3_4:70738899-70738918 None:intergenic 35.0%
GCAATCATTTCCGATTGATA+TGG - chr3_4:70738902-70738921 None:intergenic 35.0%
! AGCAAACTGATGTGTTTTTC+AGG + chr3_4:70738937-70738956 Msa0518850:intron 35.0%
TAGCAATGAGAAAAGGATGA+AGG - chr3_4:70739184-70739203 None:intergenic 35.0%
TCCAAGGAAAACTTGATTTC+CGG + chr3_4:70739264-70739283 Msa0518850:CDS 35.0%
!! TTTTAGACTTACAGAGCACT+TGG - chr3_4:70739379-70739398 None:intergenic 35.0%
TGTTATCATCGACAATCCAT+GGG - chr3_4:70739474-70739493 None:intergenic 35.0%
ATGTTATCATCGACAATCCA+TGG - chr3_4:70739475-70739494 None:intergenic 35.0%
! AAAAGATGGCTTTACGTGTA+AGG + chr3_4:70739566-70739585 Msa0518850:intron 35.0%
! TTCTGTGAACCTTGTTGATT+AGG + chr3_4:70739590-70739609 Msa0518850:intron 35.0%
CACTTCAACCCCATAATATT+TGG + chr3_4:70739828-70739847 Msa0518850:intron 35.0%
TTGGCTGCACCAAATATTAT+GGG - chr3_4:70739840-70739859 None:intergenic 35.0%
ATTGGCTGCACCAAATATTA+TGG - chr3_4:70739841-70739860 None:intergenic 35.0%
!! TTTTTCCTTGATGATAAGGG+CGG - chr3_4:70740003-70740022 None:intergenic 35.0%
!! GAGGTTTTTCCTTGATGATA+AGG - chr3_4:70740007-70740026 None:intergenic 35.0%
ATCATCAAGGAAAAACCTCA+AGG + chr3_4:70740008-70740027 Msa0518850:intron 35.0%
ATGCAAAGTATAATGCCTTG+AGG - chr3_4:70740026-70740045 None:intergenic 35.0%
! TCCAAAAATTGGCTTAAGGA+CGG - chr3_4:70740168-70740187 None:intergenic 35.0%
!! CCGATTTAAAAAGTGCCAAA+CGG - chr3_4:70740246-70740265 None:intergenic 35.0%
!! CCGTTTGGCACTTTTTAAAT+CGG + chr3_4:70740243-70740262 Msa0518850:intron 35.0%
AACGGTAATTAACTACGGTT+TGG + chr3_4:70740274-70740293 Msa0518850:intron 35.0%
CAAAAAAGGATGTGATGCAT+AGG - chr3_4:70740356-70740375 None:intergenic 35.0%
!!! TGCATCACATCCTTTTTTGT+TGG + chr3_4:70740357-70740376 Msa0518850:intron 35.0%
TGTAATAATGCCTGAACATC+AGG - chr3_4:70740752-70740771 None:intergenic 35.0%
TCCTGACTGAGAAGTTAAAA+AGG + chr3_4:70740859-70740878 Msa0518850:intron 35.0%
!!! TCCTTTTTAACTTCTCAGTC+AGG - chr3_4:70740863-70740882 None:intergenic 35.0%
ATGCTTGATGCTGATAATAG+TGG + chr3_4:70741011-70741030 Msa0518850:CDS 35.0%
! ACTTATGGAGTCTGAAATCA+AGG + chr3_4:70741085-70741104 Msa0518850:CDS 35.0%
! GTCTGAAATCAAGGATCTTA+TGG + chr3_4:70741094-70741113 Msa0518850:CDS 35.0%
AGCATCACAAGTAAAGAAAC+TGG - chr3_4:70741162-70741181 None:intergenic 35.0%
TACTGTGCACTTAAATAAGC+TGG + chr3_4:70741290-70741309 Msa0518850:CDS 35.0%
TACTTTGACAAAGATGGTAG+TGG + chr3_4:70741345-70741364 Msa0518850:CDS 35.0%
CCTTGACTATTTCATCAATG+TGG - chr3_4:70741428-70741447 None:intergenic 35.0%
CCACATTGATGAAATAGTCA+AGG + chr3_4:70741425-70741444 Msa0518850:CDS 35.0%
! GAAAATTTTGTGTTGCAGGA+TGG + chr3_4:70741607-70741626 Msa0518850:intron 35.0%
AGGATGGACAGATAGATTAT+GGG + chr3_4:70741623-70741642 Msa0518850:intron 35.0%
GAAATTAAGTGTGCTTGTCA+TGG - chr3_4:70741698-70741717 None:intergenic 35.0%
CTTAATTTCAGAGATGCTCT+TGG + chr3_4:70741709-70741728 Msa0518850:exon 35.0%
!! GGTGATACAAATTTTGGAAG+TGG + chr3_4:70741782-70741801 Msa0518850:three_prime_UTR 35.0%
TGGAAGTGGCAAAAAAACTT+TGG + chr3_4:70741796-70741815 Msa0518850:three_prime_UTR 35.0%
AAACGAACCACAACACAAAT+TGG + chr3_4:70741926-70741945 Msa0518850:three_prime_UTR 35.0%
!! TGAATCTTAGTTTTCTCGAG+GGG + chr3_4:70742105-70742124 Msa0518850:three_prime_UTR 35.0%
!! GTTGTACTGTGTTTGGTGTT+TGG - chr3_4:70737438-70737457 None:intergenic 40.0%
CTTCAACGTTGTACTGTGTT+TGG - chr3_4:70737445-70737464 None:intergenic 40.0%
CTTCGTGAAGTTTACACCTT+AGG + chr3_4:70737538-70737557 Msa0518850:intron 40.0%
! TTGACCCAGTTTTCTACCTA+AGG - chr3_4:70737557-70737576 None:intergenic 40.0%
TTAGGTAGAAAACTGGGTCA+AGG + chr3_4:70737556-70737575 Msa0518850:intron 40.0%
AAACTGGGTCAAGGTCAATT+CGG + chr3_4:70737565-70737584 Msa0518850:intron 40.0%
! GGATGCGTTTTCTGTTCATT+TGG + chr3_4:70737759-70737778 Msa0518850:intron 40.0%
! TTGGTTATGGAGCTTTGTGA+AGG + chr3_4:70737778-70737797 Msa0518850:intron 40.0%
! TTATGGAGCTTTGTGAAGGT+GGG + chr3_4:70737782-70737801 Msa0518850:intron 40.0%
AAGGTGGGGAATTGTTTGAT+AGG + chr3_4:70737797-70737816 Msa0518850:intron 40.0%
GTTTGATAGGATTGTGCAGA+AGG + chr3_4:70737810-70737829 Msa0518850:intron 40.0%
!! GACAAGCTGCTAAGTTGATT+AGG + chr3_4:70737848-70737867 Msa0518850:intron 40.0%
GTTGAAGCTTGTCATTCTCT+TGG + chr3_4:70737886-70737905 Msa0518850:intron 40.0%
!! TGCGGTGGATTCTTTTATGA+CGG + chr3_4:70738117-70738136 Msa0518850:intron 40.0%
AGAGAGAAAGGGATAAGAAG+GGG + chr3_4:70738237-70738256 Msa0518850:intron 40.0%
TTTAGGGAGCAATGTGATCT+AGG + chr3_4:70738382-70738401 Msa0518850:intron 40.0%
TTAGGGAGCAATGTGATCTA+GGG + chr3_4:70738383-70738402 Msa0518850:intron 40.0%
GTTATTGCAGGTTAATGGCA+TGG + chr3_4:70738480-70738499 Msa0518850:intron 40.0%
TCATGCACCACCATATCAAT+CGG + chr3_4:70738889-70738908 Msa0518850:intron 40.0%
AAATTATCAGCTGTGGATGC+AGG + chr3_4:70739127-70739146 Msa0518850:intron 40.0%
TTGTCTGAAAATCCCTTGGT+CGG - chr3_4:70739240-70739259 None:intergenic 40.0%
! ACCGGAAATCAAGTTTTCCT+TGG - chr3_4:70739268-70739287 None:intergenic 40.0%
! TCTAAAATTGGCACCTTGAG+TGG + chr3_4:70739430-70739449 Msa0518850:intron 40.0%
TGACACAGAAAAACCACTCA+AGG - chr3_4:70739446-70739465 None:intergenic 40.0%
! TTGAGTGGTTTTTCTGTGTC+AGG + chr3_4:70739445-70739464 Msa0518850:intron 40.0%
GCAGAATCAAGAGGTTTATC+TGG - chr3_4:70739502-70739521 None:intergenic 40.0%
GATAAGACAGCAGAATCAAG+AGG - chr3_4:70739511-70739530 None:intergenic 40.0%
! TGTTTTTCATGCATGGACTC+TGG + chr3_4:70739802-70739821 Msa0518850:intron 40.0%
TGGCTGCACCAAATATTATG+GGG - chr3_4:70739839-70739858 None:intergenic 40.0%
ACTTCATGAATGAGAAAGGC+AGG + chr3_4:70740125-70740144 Msa0518850:intron 40.0%
CTTCATGAATGAGAAAGGCA+GGG + chr3_4:70740126-70740145 Msa0518850:intron 40.0%
! TCCGTCCTTAAGCCAATTTT+TGG + chr3_4:70740164-70740183 Msa0518850:intron 40.0%
TGTTGGAATAAAAGAGGCCT+AGG + chr3_4:70740374-70740393 Msa0518850:intron 40.0%
! TTTTCTTTCTTTGGGCTCCT+AGG - chr3_4:70740394-70740413 None:intergenic 40.0%
! ATCAGAAAAGAAGGCATGCA+TGG + chr3_4:70740490-70740509 Msa0518850:intron 40.0%
! TCAGAAAAGAAGGCATGCAT+GGG + chr3_4:70740491-70740510 Msa0518850:intron 40.0%
CCAAAAATAGCAAGAACGTG+AGG - chr3_4:70740539-70740558 None:intergenic 40.0%
!!! CCTCACGTTCTTGCTATTTT+TGG + chr3_4:70740536-70740555 Msa0518850:intron 40.0%
AGAGGTCTAGATACAAGCAA+TGG - chr3_4:70740824-70740843 None:intergenic 40.0%
TGTATCTAGACCTCTATCAG+AGG + chr3_4:70740829-70740848 Msa0518850:intron 40.0%
ATTCATAGGTTATTGCGGAG+AGG + chr3_4:70740946-70740965 Msa0518850:intron 40.0%
! AGGCTTTCTGAGGAAGAAAT+CGG + chr3_4:70740966-70740985 Msa0518850:CDS 40.0%
AAAGAAGGCTTAAAGCGAGT+AGG + chr3_4:70741056-70741075 Msa0518850:CDS 40.0%
CTTAAATAAGCTGGAGAGAG+AGG + chr3_4:70741299-70741318 Msa0518850:CDS 40.0%
GAGAGAGGAAAATCTGTTGT+CGG + chr3_4:70741314-70741333 Msa0518850:CDS 40.0%
CAAGCAGCTTGTAAAGAGTT+TGG + chr3_4:70741390-70741409 Msa0518850:CDS 40.0%
CAGGATGGACAGATAGATTA+TGG + chr3_4:70741622-70741641 Msa0518850:intron 40.0%
GGATGGACAGATAGATTATG+GGG + chr3_4:70741624-70741643 Msa0518850:intron 40.0%
! ATTTGCTGCCATGATGAGAA+AGG + chr3_4:70741648-70741667 Msa0518850:CDS 40.0%
TTTGCTGCCATGATGAGAAA+GGG + chr3_4:70741649-70741668 Msa0518850:CDS 40.0%
ACCATTTCCCTTTCTCATCA+TGG - chr3_4:70741659-70741678 None:intergenic 40.0%
ATGATGAGAAAGGGAAATGG+TGG + chr3_4:70741658-70741677 Msa0518850:CDS 40.0%
TGATGAGAAAGGGAAATGGT+GGG + chr3_4:70741659-70741678 Msa0518850:CDS 40.0%
AGAGATGCTCTTGGAATCAT+AGG + chr3_4:70741718-70741737 Msa0518850:three_prime_UTR 40.0%
CTCTTGGAATCATAGGCAAT+GGG + chr3_4:70741725-70741744 Msa0518850:three_prime_UTR 40.0%
TAATCCGCCAATTTGTGTTG+TGG - chr3_4:70741936-70741955 None:intergenic 40.0%
AAGGACGAGAATAACCATCA+TGG + chr3_4:70741981-70742000 Msa0518850:three_prime_UTR 40.0%
AGAATAACCATCATGGTGTG+TGG + chr3_4:70741988-70742007 Msa0518850:three_prime_UTR 40.0%
!!! ATGTGGGTTTTGGTGGTGTT+GGG - chr3_4:70737492-70737511 None:intergenic 45.0%
AACACCACCAAAACCCACAT+GGG + chr3_4:70737492-70737511 Msa0518850:intron 45.0%
ACATAAGGGAGAACCCATGT+GGG - chr3_4:70737508-70737527 None:intergenic 45.0%
TACATAAGGGAGAACCCATG+TGG - chr3_4:70737509-70737528 None:intergenic 45.0%
AACTGGGTCAAGGTCAATTC+GGG + chr3_4:70737566-70737585 Msa0518850:intron 45.0%
TCACTGCACACACAACTCAA+CGG + chr3_4:70737597-70737616 Msa0518850:intron 45.0%
CCATGGATCCTCACAACATT+TGG - chr3_4:70737730-70737749 None:intergenic 45.0%
CCAAATGTTGTGAGGATCCA+TGG + chr3_4:70737727-70737746 Msa0518850:intron 45.0%
GAGGATCCATGGTACTTATG+AGG + chr3_4:70737738-70737757 Msa0518850:intron 45.0%
ACGCATCCTCATAAGTACCA+TGG - chr3_4:70737747-70737766 None:intergenic 45.0%
! GTTATGGAGCTTTGTGAAGG+TGG + chr3_4:70737781-70737800 Msa0518850:intron 45.0%
! TATGGAGCTTTGTGAAGGTG+GGG + chr3_4:70737783-70737802 Msa0518850:intron 45.0%
TCTGGGTCATTGTTCAGATG+CGG + chr3_4:70738099-70738118 Msa0518850:intron 45.0%
AACAAGAACATGGGAGAGAG+AGG + chr3_4:70738568-70738587 Msa0518850:intron 45.0%
ACAAGAACATGGGAGAGAGA+GGG + chr3_4:70738569-70738588 Msa0518850:intron 45.0%
AAAATGAAGCGGGTGCTCAA+TGG + chr3_4:70738651-70738670 Msa0518850:intron 45.0%
AAATGAAGCGGGTGCTCAAT+GGG + chr3_4:70738652-70738671 Msa0518850:intron 45.0%
TTCTTCGTACAAACCTGCAG+AGG - chr3_4:70738704-70738723 None:intergenic 45.0%
GTGCATGAAATGAACGACAC+TGG - chr3_4:70738877-70738896 None:intergenic 45.0%
TAATGCTTGTGCAAGACCTC+TGG - chr3_4:70739006-70739025 None:intergenic 45.0%
GAGGTCTTGCACAAGCATTA+TGG + chr3_4:70739006-70739025 Msa0518850:CDS 45.0%
ATATGCCTAGTTGTCCGACA+TGG + chr3_4:70739642-70739661 Msa0518850:intron 45.0%
CAAGCTTTGCAATGTTCCCA+TGG - chr3_4:70739878-70739897 None:intergenic 45.0%
CTTAACCGCCCTTATCATCA+AGG + chr3_4:70739995-70740014 Msa0518850:intron 45.0%
! ACTACGGTTTGGCACTTTCT+AGG + chr3_4:70740285-70740304 Msa0518850:intron 45.0%
! AAAGAAGGCATGCATGGGTT+CGG + chr3_4:70740496-70740515 Msa0518850:intron 45.0%
! TTTGGTTGTTGCTTCGAGCA+AGG + chr3_4:70740554-70740573 Msa0518850:intron 45.0%
ACAACCTTGACCTGATGTTC+AGG + chr3_4:70740739-70740758 Msa0518850:intron 45.0%
AATGCCTGAACATCAGGTCA+AGG - chr3_4:70740746-70740765 None:intergenic 45.0%
! CTTTCTGAGGAAGAAATCGG+TGG + chr3_4:70740969-70740988 Msa0518850:CDS 45.0%
GGAAGAAATCGGTGGTTTGA+AGG + chr3_4:70740977-70740996 Msa0518850:CDS 45.0%
GTGGTTTGAAGGAGTTGTTC+AGG + chr3_4:70740988-70741007 Msa0518850:CDS 45.0%
GCGAGTAGGATCTGAACTTA+TGG + chr3_4:70741070-70741089 Msa0518850:CDS 45.0%
! AATAACGGGACACTCGACTA+TGG + chr3_4:70741252-70741271 Msa0518850:CDS 45.0%
GCCATGATGAGAAAGGGAAA+TGG + chr3_4:70741655-70741674 Msa0518850:CDS 45.0%
! AGAAAGGGAAATGGTGGGAT+TGG + chr3_4:70741664-70741683 Msa0518850:CDS 45.0%
GCTCTTGGAATCATAGGCAA+TGG + chr3_4:70741724-70741743 Msa0518850:three_prime_UTR 45.0%
CGAACCACAACACAAATTGG+CGG + chr3_4:70741929-70741948 Msa0518850:three_prime_UTR 45.0%
ACTTGTACCACACACCATGA+TGG - chr3_4:70741998-70742017 None:intergenic 45.0%
GTCGTAGATACTTGAGTCTC+TGG + chr3_4:70742016-70742035 Msa0518850:three_prime_UTR 45.0%
!! ATCTTAGTTTTCTCGAGGGG+AGG + chr3_4:70742108-70742127 Msa0518850:three_prime_UTR 45.0%
!! TCTTAGTTTTCTCGAGGGGA+GGG + chr3_4:70742109-70742128 Msa0518850:three_prime_UTR 45.0%
!!! TTTTGGTGGTGTTGGGTTGG+TGG - chr3_4:70737485-70737504 None:intergenic 50.0%
!!! CATGTGGGTTTTGGTGGTGT+TGG - chr3_4:70737493-70737512 None:intergenic 50.0%
CAACACCACCAAAACCCACA+TGG + chr3_4:70737491-70737510 Msa0518850:intron 50.0%
!! AGAACCCATGTGGGTTTTGG+TGG - chr3_4:70737499-70737518 None:intergenic 50.0%
CACTGCACACACAACTCAAC+GGG + chr3_4:70737598-70737617 Msa0518850:intron 50.0%
CAAGAACATGGGAGAGAGAG+GGG + chr3_4:70738570-70738589 Msa0518850:intron 50.0%
AAGAACATGGGAGAGAGAGG+GGG + chr3_4:70738571-70738590 Msa0518850:intron 50.0%
!! AGAGGGGGGGTGTTCAAATT+AGG + chr3_4:70738586-70738605 Msa0518850:intron 50.0%
AACCTGATTCTGTCCTCTGC+AGG + chr3_4:70738688-70738707 Msa0518850:intron 50.0%
AACCTGCAGAGGACAGAATC+AGG - chr3_4:70738693-70738712 None:intergenic 50.0%
TCCATACTATGTTGCGCCAG+AGG + chr3_4:70738987-70739006 Msa0518850:CDS 50.0%
ACCTCTGGCGCAACATAGTA+TGG - chr3_4:70738991-70739010 None:intergenic 50.0%
AGATAGATACCGGCCCAGAA+CGG - chr3_4:70739093-70739112 None:intergenic 50.0%
TTGATTTCCGGTCTGAGCCA+TGG + chr3_4:70739276-70739295 Msa0518850:CDS 50.0%
! TTGGCACTGTCTGAAATCCC+AGG - chr3_4:70739302-70739321 None:intergenic 50.0%
TGGGATTTCAGACAGTGCCA+AGG + chr3_4:70739301-70739320 Msa0518850:CDS 50.0%
TTTCTGTGTCAGGTCACCCA+TGG + chr3_4:70739455-70739474 Msa0518850:intron 50.0%
TCATCGCAGAGAACTGCTTC+AGG - chr3_4:70739537-70739556 None:intergenic 50.0%
TACAGCCATGTCGGACAACT+AGG - chr3_4:70739650-70739669 None:intergenic 50.0%
TAGTTGTCCGACATGGCTGT+AGG + chr3_4:70739649-70739668 Msa0518850:intron 50.0%
AGTTGTCCGACATGGCTGTA+GGG + chr3_4:70739650-70739669 Msa0518850:intron 50.0%
CTGTAGGGGATGTCTTGGTT+TGG + chr3_4:70739665-70739684 Msa0518850:intron 50.0%
ATGAATGAGAAAGGCAGGGC+AGG + chr3_4:70740130-70740149 Msa0518850:intron 50.0%
GGCATCTGCTAACTACCGTT+TGG + chr3_4:70740228-70740247 Msa0518850:intron 50.0%
! ATGCATGGGTTCGGTTCTGA+AGG + chr3_4:70740505-70740524 Msa0518850:intron 50.0%
TGCTTCGAGCAAGGAATACC+AGG + chr3_4:70740563-70740582 Msa0518850:intron 50.0%
GCTTCGAGCAAGGAATACCA+GGG + chr3_4:70740564-70740583 Msa0518850:intron 50.0%
ACCAGGGTCGGAAGCTAATA+TGG + chr3_4:70740580-70740599 Msa0518850:intron 50.0%
! TCCATATTAGCTTCCGACCC+TGG - chr3_4:70740584-70740603 None:intergenic 50.0%
GGACAATGTGCCTCTGATAG+AGG - chr3_4:70740842-70740861 None:intergenic 50.0%
TATTGCGGAGAGGCTTTCTG+AGG + chr3_4:70740956-70740975 Msa0518850:CDS 50.0%
AGCTGCTTGAATCTCGTCGA+TGG - chr3_4:70741379-70741398 None:intergenic 50.0%
! AGGGAAATGGTGGGATTGGA+AGG + chr3_4:70741668-70741687 Msa0518850:CDS 50.0%
!! TGGTGTTGGGTTGGTGGTGT+TGG - chr3_4:70737479-70737498 None:intergenic 55.0%
!!! GGGTTTTGGTGGTGTTGGGT+TGG - chr3_4:70737488-70737507 None:intergenic 55.0%
! GGGAGAACCCATGTGGGTTT+TGG - chr3_4:70737502-70737521 None:intergenic 55.0%
GGGTCATTGTTCAGATGCGG+TGG + chr3_4:70738102-70738121 Msa0518850:intron 55.0%
AGAACATGGGAGAGAGAGGG+GGG + chr3_4:70738572-70738591 Msa0518850:intron 55.0%
ATGGACCTGAAGCAGACGTG+TGG + chr3_4:70739025-70739044 Msa0518850:CDS 55.0%
GTGGATGCAGGCTGTAGTGT+AGG + chr3_4:70739139-70739158 Msa0518850:intron 55.0%
CTTGGTCGGTCTCTGTAGGT+GGG - chr3_4:70739226-70739245 None:intergenic 55.0%
CACCTACAGAGACCGACCAA+GGG + chr3_4:70739225-70739244 Msa0518850:intron 55.0%
ATCCCTTGGTCGGTCTCTGT+AGG - chr3_4:70739230-70739249 None:intergenic 55.0%
! CTGTCTGAAATCCCAGGCCA+TGG - chr3_4:70739296-70739315 None:intergenic 55.0%
GTTGTCCGACATGGCTGTAG+GGG + chr3_4:70739651-70739670 Msa0518850:intron 55.0%
GACATCCCCTACAGCCATGT+CGG - chr3_4:70739659-70739678 None:intergenic 55.0%
CATGGCTGTAGGGGATGTCT+TGG + chr3_4:70739660-70739679 Msa0518850:intron 55.0%
! CGCTTTTCATGCCTGCGTGA+AGG + chr3_4:70739695-70739714 Msa0518850:intron 55.0%
GCATAAGGTTGCCTTCACGC+AGG - chr3_4:70739709-70739728 None:intergenic 55.0%
TGAGAAAGGCAGGGCAGGAA+AGG + chr3_4:70740135-70740154 Msa0518850:intron 55.0%
! TTTTAGGCACCTCGCGAGTG+TGG + chr3_4:70740207-70740226 Msa0518850:intron 55.0%
CGAGCAAGGAATACCAGGGT+CGG + chr3_4:70740568-70740587 Msa0518850:intron 55.0%
GAACATGGGAGAGAGAGGGG+GGG + chr3_4:70738573-70738592 Msa0518850:intron 60.0%
GCACTCCACACGTCTGCTTC+AGG - chr3_4:70739033-70739052 None:intergenic 60.0%
GAAGCAGACGTGTGGAGTGC+TGG + chr3_4:70739033-70739052 Msa0518850:CDS 60.0%
TAAGCGGGGTTCCTCCGTTC+TGG + chr3_4:70739076-70739095 Msa0518850:CDS 60.0%
AAGCGGGGTTCCTCCGTTCT+GGG + chr3_4:70739077-70739096 Msa0518850:CDS 60.0%
TAGATACCGGCCCAGAACGG+AGG - chr3_4:70739090-70739109 None:intergenic 60.0%
CCTTGGTCGGTCTCTGTAGG+TGG - chr3_4:70739227-70739246 None:intergenic 60.0%
CCACCTACAGAGACCGACCA+AGG + chr3_4:70739224-70739243 Msa0518850:intron 60.0%
TAGCAGATGCCACACTCGCG+AGG - chr3_4:70740219-70740238 None:intergenic 60.0%
TTCCGGTCTGAGCCATGGCC+TGG + chr3_4:70739281-70739300 Msa0518850:CDS 65.0%
TCCGGTCTGAGCCATGGCCT+GGG + chr3_4:70739282-70739301 Msa0518850:CDS 65.0%
TCCCAGGCCATGGCTCAGAC+CGG - chr3_4:70739286-70739305 None:intergenic 65.0%
! GGGGTTCCTCCGTTCTGGGC+CGG + chr3_4:70739081-70739100 Msa0518850:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 70737348 70742153 70737348 ID=Msa0518850;Name=Msa0518850
chr3_4 mRNA 70737348 70742153 70737348 ID=Msa0518850-mRNA-1;Parent=Msa0518850;Name=Msa0518850-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.83|0.85|1|0.83|0.85|7|440|301
chr3_4 exon 70737348 70737354 70737348 ID=Msa0518850-mRNA-1:exon:19302;Parent=Msa0518850-mRNA-1
chr3_4 exon 70738959 70739102 70738959 ID=Msa0518850-mRNA-1:exon:19303;Parent=Msa0518850-mRNA-1
chr3_4 exon 70739234 70739386 70739234 ID=Msa0518850-mRNA-1:exon:19304;Parent=Msa0518850-mRNA-1
chr3_4 exon 70739467 70739582 70739467 ID=Msa0518850-mRNA-1:exon:19305;Parent=Msa0518850-mRNA-1
chr3_4 exon 70740954 70741121 70740954 ID=Msa0518850-mRNA-1:exon:19306;Parent=Msa0518850-mRNA-1
chr3_4 exon 70741240 70741468 70741240 ID=Msa0518850-mRNA-1:exon:19307;Parent=Msa0518850-mRNA-1
chr3_4 exon 70741625 70742153 70741625 ID=Msa0518850-mRNA-1:exon:19308;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70737348 70737354 70737348 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70738959 70739102 70738959 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70739234 70739386 70739234 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70739467 70739582 70739467 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70740954 70741121 70740954 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70741240 70741468 70741240 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 CDS 70741625 70741713 70741625 ID=Msa0518850-mRNA-1:cds;Parent=Msa0518850-mRNA-1
chr3_4 three_prime_UTR 70741714 70742153 70741714 ID=Msa0518850-mRNA-1:three_prime_utr;Parent=Msa0518850-mRNA-1
Gene Sequence

>Msa0518850

ATGAACAGTGAAATCTTTAGTGATGTTGTTGGAAGTCCATACTATGTTGCGCCAGAGGTCTTGCACAAGCATTATGGACCTGAAGCAGACGTGTGGAGTGCTGGCGTTATTTTGTACATCTTATTAAGCGGGGTTCCTCCGTTCTGGGCCGAGACCGACCAAGGGATTTTCAGACAAATTTTCCAAGGAAAACTTGATTTCCGGTCTGAGCCATGGCCTGGGATTTCAGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCAAAAACAAGATTTACAGCTCACCAAGTGCTCTGTCACCCATGGATTGTCGATGATAACATTGCACCAGATAAACCTCTTGATTCTGCTGTCTTATCTCGCCTGAAGCAGTTCTCTGCGATGAATAAACTTAAAAAGATGGCTTTACGTGTTATTGCGGAGAGGCTTTCTGAGGAAGAAATCGGTGGTTTGAAGGAGTTGTTCAGGATGCTTGATGCTGATAATAGTGGAACTATAACATTGGAAGAGTTAAAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAACGGGACACTCGACTATGGCGAATTCATTGCTGCTACTGTGCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCGGCATTCTCATACTTTGACAAAGATGGTAGTGGTTACATAACCATCGACGAGATTCAAGCAGCTTGTAAAGAGTTTGGCTTAGATGATATCCACATTGATGAAATAGTCAAGGAAATTGATCAGGATAATGCAAGATGGACAGATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGAAATGGTGGGATTGGAAGGAGAACCATGACAAGCACACTTAA
Protein sequence

>Msa0518850

MNSEIFSDVVGSPYYVAPEVLHKHYGPEADVWSAGVILYILLSGVPPFWAETDQGIFRQIFQGKLDFRSEPWPGISDSAKDLIRKMLDRNPKTRFTAHQVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFRMLDADNSGTITLEELKEGLKRVGSELMESEIKDLMDAADIDNNGTLDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQAACKEFGLDDIHIDEIVKEIDQDNARWTDRLWGICCHDEKGKWWDWKENHDKHT*