AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0681250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0681250 MtrunA17_Chr4g0027201 98.083 626 11 1 1 625 1 626 0.0 1269
Msa0681250 MtrunA17_Chr8g0377771 31.481 540 342 10 21 550 24 545 1.67e-69 236
Msa0681250 MtrunA17_Chr7g0234801 29.572 514 336 8 44 548 43 539 6.83e-62 214
Msa0681250 MtrunA17_Chr8g0339141 30.664 512 327 9 50 550 55 549 1.81e-56 200
Msa0681250 MtrunA17_Chr7g0255551 31.346 520 317 12 29 533 15 509 1.98e-56 199
Msa0681250 MtrunA17_Chr1g0152361 31.034 377 242 7 190 556 12 380 7.28e-38 144
Msa0681250 MtrunA17_Chr1g0152361 30.636 173 108 4 101 263 41 211 5.09e-12 68.2
Msa0681250 MtrunA17_Chr8g0352971 27.624 362 228 12 37 384 1 342 2.14e-23 103
Msa0681250 MtrunA17_Chr8g0352971 26.860 242 160 5 34 268 119 350 2.20e-16 82.0
Msa0681250 MtrunA17_Chr8g0352971 35.036 137 80 3 276 407 2 134 5.61e-13 71.2
Msa0681250 MtrunA17_Chr4g0019501 29.118 340 198 14 230 552 22 335 4.27e-20 92.8
Msa0681250 MtrunA17_Chr7g0237741 41.667 120 62 3 399 518 92 203 5.11e-18 84.7
Msa0681250 MtrunA17_Chr4g0008831 89.189 37 4 0 475 511 18 54 1.20e-16 74.3
Msa0681250 MtrunA17_Chr2g0323971 34.932 146 79 4 401 538 97 234 9.54e-15 75.1
Msa0681250 MtrunA17_Chr1g0152351 37.121 132 79 2 154 284 58 186 1.73e-14 72.8
Msa0681250 MtrunA17_Chr1g0152351 28.402 169 104 3 20 186 48 201 1.76e-12 67.0
Msa0681250 MtrunA17_Chr5g0435521 35.294 119 71 4 266 383 6 119 2.14e-12 66.2
Msa0681250 MtrunA17_Chr8g0336421 27.586 174 116 3 100 263 2 175 5.53e-12 68.6
Msa0681250 MtrunA17_Chr8g0338001 23.077 351 245 11 141 479 43 380 5.68e-12 68.2
Msa0681250 MtrunA17_Chr8g0338001 26.829 246 159 8 34 267 60 296 1.17e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0681250 AT3G54010.1 70.484 620 179 3 7 625 5 621 0.0 906
Msa0681250 AT3G54010.2 70.599 534 153 3 93 625 1 531 0.0 784
Msa0681250 AT5G48570.1 30.320 531 343 8 31 550 43 557 3.52e-62 216
Msa0681250 AT3G25230.1 29.755 531 346 8 30 550 34 547 2.08e-60 211
Msa0681250 AT3G25230.2 29.755 531 346 8 30 550 34 547 2.70e-60 211
Msa0681250 AT3G21640.1 29.766 299 176 11 270 551 48 329 1.95e-20 94.0
Msa0681250 AT4G30480.2 33.333 144 88 2 376 519 79 214 2.21e-14 74.3
Msa0681250 AT3G55520.2 35.537 121 68 4 266 383 6 119 1.70e-12 67.0
Msa0681250 AT3G55520.3 35.537 121 68 4 266 383 6 119 1.70e-12 67.0
Msa0681250 AT3G55520.1 35.537 121 68 4 266 383 6 119 1.70e-12 67.0
Msa0681250 AT4G30480.1 34.109 129 77 2 376 504 79 199 2.33e-12 67.0
Msa0681250 AT2G42580.1 30.159 126 70 2 389 511 442 552 2.56e-11 67.4
Msa0681250 AT3G58620.1 32.787 122 60 3 397 513 441 545 3.56e-11 66.6
Msa0681250 AT3G58620.2 32.787 122 60 3 397 513 441 545 3.70e-11 66.6

Find 177 sgRNAs with CRISPR-Local

Find 849 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTATGGGATTTAATTT+TGG 0.131976 4_4:+41391959 Msa0681250:three_prime_UTR
AGAAAATGAGACCAGGATTT+TGG 0.160673 4_4:-41380234 None:intergenic
TTACCCAATACATGTCTTAT+TGG 0.160786 4_4:-41381587 None:intergenic
TCCATTTGAAAATTGTATTA+TGG 0.221259 4_4:-41391673 None:intergenic
GATGGATTTGGATCCTCTTA+TGG 0.228401 4_4:+41391946 Msa0681250:three_prime_UTR
AATAAAGTTGTATGCATAAT+AGG 0.246011 4_4:+41391809 Msa0681250:three_prime_UTR
AAAGCTCGAAAACAATTTAA+AGG 0.252297 4_4:+41391391 Msa0681250:CDS
CCTGCACCTCACCATCTTTC+CGG 0.253397 4_4:-41391489 None:intergenic
CAACCATTGGATTTCTGTTC+TGG 0.258493 4_4:+41386377 Msa0681250:CDS
CTGTTCTCAATGAAGAAAAT+AGG 0.258621 4_4:+41386321 Msa0681250:CDS
TTTCCAAATGTGAAGAAGTA+TGG 0.269003 4_4:-41383642 None:intergenic
ATTTCAGCAAAGACAGTTAC+TGG 0.270927 4_4:+41383588 Msa0681250:CDS
CCAGGTTATCACTGATGATT+TGG 0.300295 4_4:+41382496 Msa0681250:intron
AGGGTTGGTTTGCTCACTTT+TGG 0.308176 4_4:+41391575 Msa0681250:CDS
GAACCATACTTCTTCACATT+TGG 0.309966 4_4:+41383639 Msa0681250:CDS
TGATTTGGAAGTGGTTAAAA+AGG 0.314360 4_4:+41382511 Msa0681250:CDS
GTTTAAGTTGAATTATAGTA+TGG 0.331521 4_4:-41391644 None:intergenic
GTCCATTGAGACCTGTAATA+AGG 0.341897 4_4:+41390408 Msa0681250:CDS
ATGGATTTGGATCCTCTTAT+GGG 0.343533 4_4:+41391947 Msa0681250:three_prime_UTR
CTATCAGTTCAATTTCAAAA+TGG 0.345517 4_4:-41382081 None:intergenic
GATAGCAGGCAGCAACATTC+AGG 0.345976 4_4:-41390363 None:intergenic
TGTAGTTATTACAGGGTAAC+AGG 0.351522 4_4:+41388667 Msa0681250:intron
ATCCCCATTTCAAGACCTTT+AGG 0.352401 4_4:-41383976 None:intergenic
ACTGAACACAAATTTATTCC+TGG 0.353292 4_4:-41391748 None:intergenic
CCATCCTTCAGATGCTGATC+AGG 0.360523 4_4:+41380430 Msa0681250:CDS
TTCACTTCATAAGGTTCTCT+TGG 0.369019 4_4:-41383469 None:intergenic
TACCAAGCCTTCACTTCATA+AGG 0.369742 4_4:-41383478 None:intergenic
AGCAAATCCTGCGCACGTTA+AGG 0.369791 4_4:+41390897 Msa0681250:CDS
ATGAAGCCTCAGTTGCATTA+TGG 0.375020 4_4:+41382004 Msa0681250:CDS
CCATAACCAGGGTATTTAGA+AGG 0.375975 4_4:-41380268 None:intergenic
ACTTCACCCTTCAACATTGT+TGG 0.382173 4_4:-41381644 None:intergenic
GGTAAAAGCAAGATGCTATT+GGG 0.385037 4_4:+41381605 Msa0681250:CDS
CATAAAACATACCTTATTAC+AGG 0.388687 4_4:-41390419 None:intergenic
CTCATCAGATGGAACGAATT+CGG 0.389272 4_4:+41391516 Msa0681250:CDS
AACACCAATAAGACATGTAT+TGG 0.389636 4_4:+41381583 Msa0681250:CDS
TCAGTAGGTGGTTTCTTCTT+CGG 0.390342 4_4:-41380332 None:intergenic
TGTACGTGAAGGGGAGGGTT+GGG 0.402568 4_4:+41383441 Msa0681250:CDS
ATGCTATTGGGCTTGCTAGA+AGG 0.404390 4_4:+41381617 Msa0681250:CDS
AGCAAGGGCTGATTTCAAAA+TGG 0.405604 4_4:+41390969 Msa0681250:CDS
TCACTCCACAATTCGAACTT+TGG 0.406292 4_4:+41380717 Msa0681250:CDS
GGGTAAAAGCAAGATGCTAT+TGG 0.407059 4_4:+41381604 Msa0681250:CDS
CCTTCTAAATACCCTGGTTA+TGG 0.416148 4_4:+41380268 Msa0681250:exon
GTGAGGGACGTGCTTGGAGA+TGG 0.416863 4_4:+41385844 Msa0681250:CDS
TGTTCTCAATGAAGAAAATA+GGG 0.417407 4_4:+41386322 Msa0681250:CDS
AAACCATCAGGAGCAGAAAC+AGG 0.421852 4_4:-41382040 None:intergenic
GTACCTAAAGGTCTTGAAAT+GGG 0.422391 4_4:+41383973 Msa0681250:CDS
ACTTCAGAATCTTCTATAAC+AGG 0.425096 4_4:-41384072 None:intergenic
GAACAAGCTCCACTTCAAAC+TGG 0.425332 4_4:-41384095 None:intergenic
GCAAATCCTGCGCACGTTAA+GGG 0.429054 4_4:+41390898 Msa0681250:CDS
TGCACCTGACGCAGATCAAA+AGG 0.429264 4_4:+41391555 Msa0681250:CDS
TGAAATAATTATCATAACTT+AGG 0.433170 4_4:-41391998 None:intergenic
CCGGAAAGATGGTGAGGTGC+AGG 0.440595 4_4:+41391489 Msa0681250:CDS
CGTCGGATTCGTGATGGAAA+AGG 0.442344 4_4:+41385880 Msa0681250:CDS
AGGAAGAAGAAAATTGTAGC+TGG 0.442596 4_4:+41380365 Msa0681250:CDS
AAGCTCGAAAACAATTTAAA+GGG 0.447801 4_4:+41391392 Msa0681250:CDS
GGTACCTAAAGGTCTTGAAA+TGG 0.448036 4_4:+41383972 Msa0681250:intron
CCAAAATTAAATCCCATAAG+AGG 0.448332 4_4:-41391959 None:intergenic
AAATGGAGTTCATCATCCTT+AGG 0.451248 4_4:-41382064 None:intergenic
TTGTACGTGAAGGGGAGGGT+TGG 0.454454 4_4:+41383440 Msa0681250:CDS
TTCTCCCAACTTTAGATAGC+AGG 0.457885 4_4:-41390377 None:intergenic
TTAACTTCTGCAATTTCTCC+AGG 0.461518 4_4:-41391430 None:intergenic
GGGCTATTTGACAAGAAGCC+TGG 0.462556 4_4:+41391412 Msa0681250:CDS
CCGAGGGCGCTCATATTCAA+TGG 0.464333 4_4:+41386850 Msa0681250:CDS
TTTCAGATCACTTTGCTACC+AGG 0.465663 4_4:+41391700 Msa0681250:three_prime_UTR
TACCTTATTACAGGTCTCAA+TGG 0.471697 4_4:-41390410 None:intergenic
CATACCTCCATGTTCGGATC+GGG 0.471700 4_4:-41380761 None:intergenic
TGTCCTGTTTCTGCTCCTGA+TGG 0.471971 4_4:+41382037 Msa0681250:CDS
GCGCCCTCGGGAACATTTGA+AGG 0.473870 4_4:-41386837 None:intergenic
AAATCGCATACCTCCATGTT+CGG 0.475444 4_4:-41380767 None:intergenic
TCGTCGTGGAATGGCCTACA+TGG 0.476188 4_4:+41390927 Msa0681250:CDS
TGTGTTTGTCTGATGCTACC+TGG 0.477286 4_4:+41386618 Msa0681250:CDS
CCATTGAATATGAGCGCCCT+CGG 0.480069 4_4:-41386850 None:intergenic
ATCAAGTCACAAGTGAGATC+CGG 0.484585 4_4:+41391470 Msa0681250:CDS
TTGGATTTCTGTTCTGGAGA+AGG 0.484862 4_4:+41386383 Msa0681250:CDS
AACTTATCATAAGCATAGTC+TGG 0.484883 4_4:-41386666 None:intergenic
TTTCCTTCCTCGTCATCTTG+TGG 0.484899 4_4:-41390174 None:intergenic
TGCTGCCTGCTATCTAAAGT+TGG 0.485680 4_4:+41390372 Msa0681250:CDS
AGGAATTCCAACAATGTTGA+AGG 0.487638 4_4:+41381637 Msa0681250:CDS
TCCACAATTCGAACTTTGGA+TGG 0.489031 4_4:+41380721 Msa0681250:CDS
GAGAGTTCAGGCATGTTACC+AGG 0.491128 4_4:+41391730 Msa0681250:three_prime_UTR
TGATAACGATGGCCAACCAT+TGG 0.493123 4_4:+41386364 Msa0681250:CDS
TATAATTCAACTTAAACCAT+TGG 0.495869 4_4:+41391650 Msa0681250:exon
AACCTTATGAAGTGAAGGCT+TGG 0.496665 4_4:+41383476 Msa0681250:CDS
GGAAGAAGAAAATTGTAGCT+GGG 0.500245 4_4:+41380366 Msa0681250:CDS
ACACCAATAAGACATGTATT+GGG 0.502823 4_4:+41381584 Msa0681250:CDS
TGCAAAGGCAAAGTATGAAA+AGG 0.505520 4_4:+41388716 Msa0681250:CDS
CGAGGGCGCTCATATTCAAT+GGG 0.507392 4_4:+41386851 Msa0681250:CDS
CATTTACAATAGCCATAACC+AGG 0.510421 4_4:-41380280 None:intergenic
CCTGATCAGCATCTGAAGGA+TGG 0.511206 4_4:-41380430 None:intergenic
TAGTGTAGGTTGTACGTGAA+GGG 0.513732 4_4:+41383431 Msa0681250:intron
GTGACAAGAGCCATCTCTCC+AGG 0.518680 4_4:-41386636 None:intergenic
TTCTGAAGTCCAGTTTGAAG+TGG 0.519155 4_4:+41384086 Msa0681250:CDS
CATGAAGTAGACTGTCATGA+AGG 0.520378 4_4:-41386283 None:intergenic
CACCTACTGAGGATGAGAAA+AGG 0.522348 4_4:+41380345 Msa0681250:CDS
TCTACTTCATGTTCATTACA+AGG 0.522997 4_4:+41386295 Msa0681250:CDS
CAACAGGTGAGGGACGTGCT+TGG 0.523904 4_4:+41385838 Msa0681250:intron
GAAAATTGTATTATGGCCAA+TGG 0.524771 4_4:-41391666 None:intergenic
TGAGGGACGTGCTTGGAGAT+GGG 0.527732 4_4:+41385845 Msa0681250:CDS
TTCAGATCACTTTGCTACCA+GGG 0.529792 4_4:+41391701 Msa0681250:three_prime_UTR
TATCACTGATGATTTGGAAG+TGG 0.530670 4_4:+41382502 Msa0681250:CDS
TTAGTGTAGGTTGTACGTGA+AGG 0.531659 4_4:+41383430 Msa0681250:intron
ACAAGTGAGATCCGGAAAGA+TGG 0.532223 4_4:+41391478 Msa0681250:CDS
ACAGACGGCGCGGCGGTGTG+TGG 0.532997 4_4:-41380203 None:intergenic
GAATCTACCCGATCCGAACA+TGG 0.538026 4_4:+41380754 Msa0681250:CDS
GTAGGTGGTTTCTTCTTCGG+TGG 0.538662 4_4:-41380329 None:intergenic
GGGTCTTTATCGTCGTGGAA+TGG 0.540148 4_4:+41390918 Msa0681250:CDS
ATTATCATAACTTAGGCCAA+TGG 0.540690 4_4:-41391991 None:intergenic
CTGATCAGCATCTGAAGGAT+GGG 0.546144 4_4:-41380429 None:intergenic
CATTGAATATGAGCGCCCTC+GGG 0.552329 4_4:-41386849 None:intergenic
AACTTTGGATGGAGTAGTCG+TGG 0.553914 4_4:+41380732 Msa0681250:CDS
ATGCTTATGATAAGTTTCCA+AGG 0.556943 4_4:+41386673 Msa0681250:CDS
GGTAACAGGTTGTTCAAAGA+AGG 0.557236 4_4:+41388681 Msa0681250:CDS
GCTGCCTGCTATCTAAAGTT+GGG 0.561282 4_4:+41390373 Msa0681250:CDS
TCATCCTTAGGAAAACCATC+AGG 0.563133 4_4:-41382052 None:intergenic
AAGAGAACCTTATGAAGTGA+AGG 0.564476 4_4:+41383471 Msa0681250:CDS
AACAATGTTGAAGGGTGAAG+TGG 0.566507 4_4:+41381646 Msa0681250:CDS
TCTGATGCTACCTGGAGAGA+TGG 0.569059 4_4:+41386626 Msa0681250:CDS
GACGGCGCGGCGGTGTGTGG+AGG 0.569821 4_4:-41380200 None:intergenic
ACACACAATTCAAATCCCTC+TGG 0.572328 4_4:-41386600 None:intergenic
CAGAACAGAAATCCAATGGT+TGG 0.573852 4_4:-41386376 None:intergenic
AAAATCTCCATTGCCCATGT+AGG 0.574139 4_4:-41390941 None:intergenic
ATGAAGTAGACTGTCATGAA+GGG 0.577080 4_4:-41386282 None:intergenic
TGATACACTCAGGTACCTAA+AGG 0.577159 4_4:+41383961 Msa0681250:intron
TCCATCCAAAGTTCGAATTG+TGG 0.578035 4_4:-41380722 None:intergenic
GCATACCTCCATGTTCGGAT+CGG 0.578773 4_4:-41380762 None:intergenic
ATAAAACGTCGGATTCGTGA+TGG 0.581465 4_4:+41385874 Msa0681250:CDS
AGTGTAGGTTGTACGTGAAG+GGG 0.582361 4_4:+41383432 Msa0681250:intron
AAAACTGAAGCAGAAAGAGC+AGG 0.583103 4_4:+41391125 Msa0681250:CDS
TCCCTATTACAGGACTGGAC+AGG 0.583776 4_4:+41387329 Msa0681250:intron
ATTACAGGACTGGACAGGAA+TGG 0.584353 4_4:+41387334 Msa0681250:intron
GGAATGGCCTACATGGGCAA+TGG 0.584398 4_4:+41390934 Msa0681250:CDS
AGGAAAATATGAACTTGCAA+AGG 0.584639 4_4:+41388701 Msa0681250:CDS
CTTCACATTTGGAAAATCAG+AGG 0.586334 4_4:+41383650 Msa0681250:CDS
CGGAAAGATGGTGAGGTGCA+GGG 0.586706 4_4:+41391490 Msa0681250:CDS
TAAAGACCCTTAACGTGCGC+AGG 0.589178 4_4:-41390904 None:intergenic
TAGGTTGTACGTGAAGGGGA+GGG 0.592925 4_4:+41383436 Msa0681250:intron
GCACCTGACGCAGATCAAAA+GGG 0.595622 4_4:+41391556 Msa0681250:CDS
AAAGGTCTTGAAATGGGGAT+CGG 0.596604 4_4:+41383979 Msa0681250:CDS
GTGCAGGGAGACTCATCAGA+TGG 0.597210 4_4:+41391505 Msa0681250:CDS
TCTTCTATAACAGGCATCAG+AGG 0.600715 4_4:-41384063 None:intergenic
GTAGGTTGTACGTGAAGGGG+AGG 0.602480 4_4:+41383435 Msa0681250:intron
CTGACGCAGATCAAAAGGGT+TGG 0.603196 4_4:+41391560 Msa0681250:CDS
ATGAAAGCTTTGATTAGACC+TGG 0.604620 4_4:+41380395 Msa0681250:CDS
TACCTAAAGGTCTTGAAATG+GGG 0.605676 4_4:+41383974 Msa0681250:CDS
GGATGGGAATCACCACCACC+AGG 0.608783 4_4:-41380413 None:intergenic
CAGGCCTTCAAATGTTCCCG+AGG 0.609663 4_4:+41386833 Msa0681250:intron
CAAACCTGATCAGCATCTGA+AGG 0.610403 4_4:-41380434 None:intergenic
TTGATCATGTCACACACAGA+AGG 0.612060 4_4:+41383615 Msa0681250:CDS
CAACAACCTTCTAAATACCC+TGG 0.613323 4_4:+41380262 Msa0681250:five_prime_UTR
TGAAATGGGGATCGGAACAA+TGG 0.613883 4_4:+41383987 Msa0681250:CDS
CGTCGTGGAATGGCCTACAT+GGG 0.615183 4_4:+41390928 Msa0681250:CDS
GGAATTCCAACAATGTTGAA+GGG 0.617518 4_4:+41381638 Msa0681250:CDS
CTACTTCATGTTCATTACAA+GGG 0.619652 4_4:+41386296 Msa0681250:CDS
AATCCACAAGATGACGAGGA+AGG 0.623099 4_4:+41390171 Msa0681250:CDS
GTTGAAGGGTGAAGTGGCAA+TGG 0.626370 4_4:+41381652 Msa0681250:CDS
AGGCCTTCAAATGTTCCCGA+GGG 0.631919 4_4:+41386834 Msa0681250:intron
GTTAAGGGTCTTTATCGTCG+TGG 0.634075 4_4:+41390913 Msa0681250:CDS
TCTCCAGAACAGAAATCCAA+TGG 0.635723 4_4:-41386380 None:intergenic
TGAAGTAGACTGTCATGAAG+GGG 0.639682 4_4:-41386281 None:intergenic
TCCTCACCATAATGCAACTG+AGG 0.639794 4_4:-41382010 None:intergenic
TGAACAAAGAAAATGAGACC+AGG 0.640596 4_4:-41380241 None:intergenic
GAAGAAGAAACCACCTACTG+AGG 0.651305 4_4:+41380334 Msa0681250:CDS
TGAGATCCGGAAAGATGGTG+AGG 0.663359 4_4:+41391483 Msa0681250:CDS
AGCTGAAAATATCAGAAACA+CGG 0.668935 4_4:+41387379 Msa0681250:CDS
GCTTTGATTAGACCTGGTGG+TGG 0.676017 4_4:+41380401 Msa0681250:CDS
TTATCATAAGCATAGTCTGG+CGG 0.684187 4_4:-41386663 None:intergenic
GCCTCAGTTGCATTATGGTG+AGG 0.691219 4_4:+41382009 Msa0681250:CDS
GAAGTAGACTGTCATGAAGG+GGG 0.694116 4_4:-41386280 None:intergenic
ATCAGATGGAACGAATTCGG+AGG 0.697245 4_4:+41391519 Msa0681250:CDS
ATTTACAATAGCCATAACCA+GGG 0.697852 4_4:-41380279 None:intergenic
GGAAAATTCTACAGACGGCG+CGG 0.700196 4_4:-41380213 None:intergenic
TGTTAATCCACAAGATGACG+AGG 0.703704 4_4:+41390167 Msa0681250:CDS
GACACGAGAGTTGATAACGA+TGG 0.709689 4_4:+41386353 Msa0681250:CDS
AAATTCTACAGACGGCGCGG+CGG 0.721258 4_4:-41380210 None:intergenic
AAAGCTTTGATTAGACCTGG+TGG 0.727816 4_4:+41380398 Msa0681250:CDS
TCTACCCGATCCGAACATGG+AGG 0.741236 4_4:+41380757 Msa0681250:CDS
ATGGGCGCCTGATAAAACGT+CGG 0.752983 4_4:+41385863 Msa0681250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTAATTAATTAATTAT+TGG + chr4_4:41390763-41390782 Msa0681250:intron 0.0%
!!! TATTTAATTTTTCACATTAA+AGG + chr4_4:41381928-41381947 Msa0681250:intron 10.0%
!!! TTTAAAAGAAATATCTTTTT+TGG - chr4_4:41382272-41382291 None:intergenic 10.0%
!! ACAAAAGAAAAATAAAATAA+AGG + chr4_4:41382635-41382654 Msa0681250:intron 10.0%
!!! TTTTATTTATAATGCTATAA+TGG + chr4_4:41383696-41383715 Msa0681250:intron 10.0%
!!! AATAAAGTTATTTATTTTCT+AGG + chr4_4:41383858-41383877 Msa0681250:intron 10.0%
!!! TTCTTTTTATTTTTGTAAAA+TGG + chr4_4:41386116-41386135 Msa0681250:intron 10.0%
!! AATAAATAATAAGTGTAAAA+TGG - chr4_4:41386449-41386468 None:intergenic 10.0%
!!! AATATCTTTGAAAATTTAAA+TGG + chr4_4:41387656-41387675 Msa0681250:intron 10.0%
!!! TATTTTTAAAACTTTTTTGA+GGG + chr4_4:41388432-41388451 Msa0681250:intron 10.0%
!!! TATGTTTTATTTTGTATATA+TGG - chr4_4:41390745-41390764 None:intergenic 10.0%
!!! GCATTTATTTATTTTTTAAT+GGG - chr4_4:41391296-41391315 None:intergenic 10.0%
!!! AGCATTTATTTATTTTTTAA+TGG - chr4_4:41391297-41391316 None:intergenic 10.0%
!! AAACAAAAAAGACTAAAAAA+TGG - chr4_4:41381248-41381267 None:intergenic 15.0%
!!! ATTTTTTAGTCTTTTTTGTT+TGG + chr4_4:41381247-41381266 Msa0681250:intron 15.0%
!!! TCTTATGTATAAATTTTTTC+TGG + chr4_4:41381710-41381729 Msa0681250:intron 15.0%
!! TTTATTTATAGAATCTTCAT+TGG + chr4_4:41381757-41381776 Msa0681250:intron 15.0%
!! TAAATAAATAAATCACTAAG+TGG - chr4_4:41381914-41381933 None:intergenic 15.0%
!! TAAAAAAAGATAGAGAAAAA+AGG - chr4_4:41382158-41382177 None:intergenic 15.0%
!!! ATAGCATTTCTAAAAAAAAT+TGG + chr4_4:41383257-41383276 Msa0681250:intron 15.0%
!!! TTGTCATTTGTATTTATTTT+GGG - chr4_4:41383840-41383859 None:intergenic 15.0%
!!! ATTGTCATTTGTATTTATTT+TGG - chr4_4:41383841-41383860 None:intergenic 15.0%
!!! GATAAAAAATTACTTTTTCT+TGG + chr4_4:41384205-41384224 Msa0681250:intron 15.0%
!!! ACTTTTATTTCATAGATTAA+GGG - chr4_4:41384834-41384853 None:intergenic 15.0%
!!! AACTTTTATTTCATAGATTA+AGG - chr4_4:41384835-41384854 None:intergenic 15.0%
!!! TTCCTTTTTGTTTATTTATT+TGG - chr4_4:41385986-41386005 None:intergenic 15.0%
!!! AATATTTTTCAAATTACCTT+TGG - chr4_4:41386903-41386922 None:intergenic 15.0%
!!! ATTAAGATTATTTTGTGTTT+TGG + chr4_4:41387090-41387109 Msa0681250:intron 15.0%
!! TTATATCAATTTGTATAGAT+TGG + chr4_4:41387696-41387715 Msa0681250:intron 15.0%
!!! TTTTAAAAATAGAGTCAATT+TGG - chr4_4:41388423-41388442 None:intergenic 15.0%
!!! CTATTTTTAAAACTTTTTTG+AGG + chr4_4:41388431-41388450 Msa0681250:intron 15.0%
!! TAATACTATAGAAAATGTTA+GGG - chr4_4:41388478-41388497 None:intergenic 15.0%
!! ATAATACTATAGAAAATGTT+AGG - chr4_4:41388479-41388498 None:intergenic 15.0%
!! TCCAAAAAATAATCAAATAT+CGG + chr4_4:41388511-41388530 Msa0681250:intron 15.0%
!! ATTACACAGATTTATATTTA+AGG + chr4_4:41389569-41389588 Msa0681250:intron 15.0%
!!! TGTTTTAGAAATTATGTAAT+GGG - chr4_4:41389755-41389774 None:intergenic 15.0%
!!! TTGTTTTAGAAATTATGTAA+TGG - chr4_4:41389756-41389775 None:intergenic 15.0%
!!! ATATCTAAACTTTTATTGAA+AGG + chr4_4:41389996-41390015 Msa0681250:intron 15.0%
!! TATTCCAATGAAATAAATAA+AGG - chr4_4:41390463-41390482 None:intergenic 15.0%
!!! TTTTATTTTGTATATATGGT+AGG - chr4_4:41390741-41390760 None:intergenic 15.0%
!!! TAAACTTTCTTTAGAATATA+AGG + chr4_4:41391005-41391024 Msa0681250:intron 15.0%
!! TGAAATAATTATCATAACTT+AGG - chr4_4:41392001-41392020 None:intergenic 15.0%
!! TTTAACAATGTATTGTATAG+TGG + chr4_4:41380646-41380665 Msa0681250:intron 20.0%
!! GTTAAAAGACGTAAAAAAAA+AGG - chr4_4:41380808-41380827 None:intergenic 20.0%
!!! TTTTTTTACGTCTTTTAACT+TGG + chr4_4:41380809-41380828 Msa0681250:intron 20.0%
!!! AATAATTCTTTGGAATGATT+TGG + chr4_4:41381013-41381032 Msa0681250:intron 20.0%
!!! ATAATTCTTTGGAATGATTT+GGG + chr4_4:41381014-41381033 Msa0681250:intron 20.0%
!!! TCTTTGAGAAAAATATTTAC+TGG + chr4_4:41381064-41381083 Msa0681250:intron 20.0%
!! GGTAAATTAACAAATATGTT+TGG - chr4_4:41381319-41381338 None:intergenic 20.0%
!!! TTAATTTTTCACATTAAAGG+AGG + chr4_4:41381931-41381950 Msa0681250:intron 20.0%
!! AATCAATATCTTGTAAATGT+CGG - chr4_4:41382892-41382911 None:intergenic 20.0%
!! TATTTATAATGCTATAATGG+TGG + chr4_4:41383699-41383718 Msa0681250:intron 20.0%
!! AATCAGGAAATAAAAAGTTT+GGG - chr4_4:41383798-41383817 None:intergenic 20.0%
!!! TGTCATTTGTATTTATTTTG+GGG - chr4_4:41383839-41383858 None:intergenic 20.0%
!! CTAGTAAAGTATATAATGAT+CGG - chr4_4:41384237-41384256 None:intergenic 20.0%
!! TTTGTATAATAAACACTGAA+AGG + chr4_4:41384371-41384390 Msa0681250:intron 20.0%
!! TAAAAATAGTGTTACCAAAT+GGG - chr4_4:41384467-41384486 None:intergenic 20.0%
!! TTAAAAATAGTGTTACCAAA+TGG - chr4_4:41384468-41384487 None:intergenic 20.0%
!! TATTTATCTGTTGAAATTTG+GGG - chr4_4:41384811-41384830 None:intergenic 20.0%
!! GTATTTATCTGTTGAAATTT+GGG - chr4_4:41384812-41384831 None:intergenic 20.0%
!!! AATAACAACAATAACCTTTT+TGG + chr4_4:41385335-41385354 Msa0681250:intron 20.0%
!!! TGTCTCAAATATATCATTTT+GGG - chr4_4:41385373-41385392 None:intergenic 20.0%
!! AGCCAAATAAATAAACAAAA+AGG + chr4_4:41385981-41386000 Msa0681250:intron 20.0%
!! AGAAATAGAAAATAATGTTG+TGG + chr4_4:41386006-41386025 Msa0681250:intron 20.0%
!! TAAGCATAAGGATAAAAAAT+TGG - chr4_4:41386159-41386178 None:intergenic 20.0%
!!! GTATTTTGTTTGTAAACAAT+AGG + chr4_4:41386239-41386258 Msa0681250:intron 20.0%
!! ATAAAGAACATATTCAATCA+GGG - chr4_4:41386739-41386758 None:intergenic 20.0%
!! TGTAAAATAGAAACCAAAAT+GGG - chr4_4:41387262-41387281 None:intergenic 20.0%
!! ATGTAAAATAGAAACCAAAA+TGG - chr4_4:41387263-41387282 None:intergenic 20.0%
!! ATTGAAAGCTTATTTACAAA+AGG - chr4_4:41387525-41387544 None:intergenic 20.0%
!! ATAGATAAAGAAGTGATTAT+TGG + chr4_4:41387812-41387831 Msa0681250:intron 20.0%
!!! TTGTATGAGATTTCATTTTT+TGG + chr4_4:41388100-41388119 Msa0681250:intron 20.0%
!!! GTAATATTGTTTTTGAACTA+TGG + chr4_4:41388124-41388143 Msa0681250:intron 20.0%
!!! ACCGATATTTGATTATTTTT+TGG - chr4_4:41388515-41388534 None:intergenic 20.0%
!!! GTTTTAGAAATTATGTAATG+GGG - chr4_4:41389754-41389773 None:intergenic 20.0%
!! TCTTAAACTCTTGTATAAAA+TGG + chr4_4:41389778-41389797 Msa0681250:intron 20.0%
!!! TAAACTTTTATTGAAAGGAT+TGG + chr4_4:41390001-41390020 Msa0681250:intron 20.0%
!! GATTTATAATTTACTTGCAT+TGG + chr4_4:41390023-41390042 Msa0681250:intron 20.0%
!! AATAAAGTTAATGAACAGAA+TGG + chr4_4:41390479-41390498 Msa0681250:intron 20.0%
!! TATATAAGAGAATAACTGAT+TGG - chr4_4:41391165-41391184 None:intergenic 20.0%
!!! TATTTTTTAATGGGAAATGT+TGG - chr4_4:41391287-41391306 None:intergenic 20.0%
!!! GTTTAAGTTGAATTATAGTA+TGG - chr4_4:41391647-41391666 None:intergenic 20.0%
!! TATAATTCAACTTAAACCAT+TGG + chr4_4:41391650-41391669 Msa0681250:exon 20.0%
!! TCCATTTGAAAATTGTATTA+TGG - chr4_4:41391676-41391695 None:intergenic 20.0%
!!! ATAATACAATTTTCAAATGG+AGG + chr4_4:41391675-41391694 Msa0681250:three_prime_UTR 20.0%
!! AATAAAGTTGTATGCATAAT+AGG + chr4_4:41391809-41391828 Msa0681250:three_prime_UTR 20.0%
!!! ATTTTGGAAAATTCTACAGA+CGG - chr4_4:41380221-41380240 None:intergenic 25.0%
! ATTTGAACAATTGAGTATCA+AGG + chr4_4:41380542-41380561 Msa0681250:intron 25.0%
! TAAGTTAATGAAGTTCACAT+CGG + chr4_4:41380621-41380640 Msa0681250:intron 25.0%
! AATATAATATCATGTATCCC+AGG + chr4_4:41380687-41380706 Msa0681250:intron 25.0%
! CAGTTTGTAGAATAATTCTT+TGG + chr4_4:41381003-41381022 Msa0681250:intron 25.0%
! CTGTAGAAAATATTGGAATT+TGG + chr4_4:41381440-41381459 Msa0681250:intron 25.0%
! GTCTTAATTTACTATGTTAG+TGG + chr4_4:41381779-41381798 Msa0681250:intron 25.0%
! CTATCAGTTCAATTTCAAAA+TGG - chr4_4:41382084-41382103 None:intergenic 25.0%
!! TTTTTATCCCGATGAATTTT+TGG + chr4_4:41382172-41382191 Msa0681250:intron 25.0%
! TAACGAAACCAAAAATTCAT+CGG - chr4_4:41382183-41382202 None:intergenic 25.0%
!!! ATCTTTTTTGGTACATGAAA+AGG - chr4_4:41382260-41382279 None:intergenic 25.0%
! TATTAGTGAAGAGAAAAGTA+AGG - chr4_4:41382345-41382364 None:intergenic 25.0%
! TTTCTCTTCACTAATATTGT+TGG + chr4_4:41382349-41382368 Msa0681250:intron 25.0%
!! AAATAGTTACTCTGAAAACA+AGG - chr4_4:41382423-41382442 None:intergenic 25.0%
! TAAACAAAAGCAACAAATGA+GGG - chr4_4:41382471-41382490 None:intergenic 25.0%
! ATAAACAAAAGCAACAAATG+AGG - chr4_4:41382472-41382491 None:intergenic 25.0%
!!! TTGCTTTTGTTTATATTTCC+AGG + chr4_4:41382478-41382497 Msa0681250:intron 25.0%
! TGTTCAATATATGTTGAACA+TGG + chr4_4:41382691-41382710 Msa0681250:intron 25.0%
! ATATGTTGAACATGGAAAAT+TGG + chr4_4:41382699-41382718 Msa0681250:intron 25.0%
! AGATAGACAATCCAAAAATA+AGG - chr4_4:41382735-41382754 None:intergenic 25.0%
!!! CATATCATGATTTTAACTTG+TGG + chr4_4:41382765-41382784 Msa0681250:intron 25.0%
! ATCAATATCTTGTAAATGTC+GGG - chr4_4:41382891-41382910 None:intergenic 25.0%
! CAACATTATTACTTCAATTG+TGG + chr4_4:41383037-41383056 Msa0681250:intron 25.0%
!!! TGAAGCAGTATTTTAAATCA+AGG - chr4_4:41383070-41383089 None:intergenic 25.0%
! ATAATCTTGTAGATATTCAC+AGG + chr4_4:41383205-41383224 Msa0681250:intron 25.0%
! TACACTAAAACAAAGTTAAC+TGG - chr4_4:41383418-41383437 None:intergenic 25.0%
!!! AGTTAACTTTGTTTTAGTGT+AGG + chr4_4:41383417-41383436 Msa0681250:intron 25.0%
!! ATTTTTATCTGGTCATTTAC+AGG + chr4_4:41383565-41383584 Msa0681250:intron 25.0%
! AAATAAAACAAGTTGTGAAG+CGG - chr4_4:41383684-41383703 None:intergenic 25.0%
! GAATCAGGAAATAAAAAGTT+TGG - chr4_4:41383799-41383818 None:intergenic 25.0%
!!! GTCATTTGTATTTATTTTGG+GGG - chr4_4:41383838-41383857 None:intergenic 25.0%
! CAACAGTTAAAAAATTAGCA+AGG - chr4_4:41384146-41384165 None:intergenic 25.0%
!!! ATACTTTACTAGTTTTACTG+TGG + chr4_4:41384245-41384264 Msa0681250:intron 25.0%
! AAATCAGGCAAAAGTAAAAA+CGG - chr4_4:41384297-41384316 None:intergenic 25.0%
! TTAGATACATGTTAGAAATC+AGG - chr4_4:41384312-41384331 None:intergenic 25.0%
! TTTCTAACATGTATCTAATG+TGG + chr4_4:41384314-41384333 Msa0681250:intron 25.0%
!! TAATAAACACTGAAAGGTTT+TGG + chr4_4:41384377-41384396 Msa0681250:intron 25.0%
! AGTGAAATCTCTAAATTCAA+GGG - chr4_4:41384425-41384444 None:intergenic 25.0%
! AAGTGAAATCTCTAAATTCA+AGG - chr4_4:41384426-41384445 None:intergenic 25.0%
! ATTTAGAGATTTCACTTTCT+AGG + chr4_4:41384429-41384448 Msa0681250:intron 25.0%
!!! CTATTTTTAAAACTCAGACA+TGG + chr4_4:41384478-41384497 Msa0681250:intron 25.0%
! GGTATTTATCTGTTGAAATT+TGG - chr4_4:41384813-41384832 None:intergenic 25.0%
!!! CATTTTGGTACAGAAAAATA+AGG + chr4_4:41384870-41384889 Msa0681250:intron 25.0%
!! GTGTCTCAAATATATCATTT+TGG - chr4_4:41385374-41385393 None:intergenic 25.0%
! TCTTTATCCTGATTGAAAAA+TGG - chr4_4:41385403-41385422 None:intergenic 25.0%
!! TGCTTTTAATAAACTTTGCA+AGG + chr4_4:41385565-41385584 Msa0681250:intron 25.0%
!! TTTTAATAAACTTTGCAAGG+AGG + chr4_4:41385568-41385587 Msa0681250:intron 25.0%
! TACTAAATTAATGTCATGTC+CGG + chr4_4:41385609-41385628 Msa0681250:intron 25.0%
! ACATTTCATGTACAAAATAC+CGG - chr4_4:41385631-41385650 None:intergenic 25.0%
! TAATACAAAGGATAAAATCC+AGG - chr4_4:41385727-41385746 None:intergenic 25.0%
! AGACACAACTAATAATACAA+AGG - chr4_4:41385739-41385758 None:intergenic 25.0%
! TACAAAAAACACAGAGATTA+TGG + chr4_4:41385937-41385956 Msa0681250:intron 25.0%
! ACAAAAAACACAGAGATTAT+GGG + chr4_4:41385938-41385957 Msa0681250:intron 25.0%
! AAAGAATGAAAACTGAGAAA+AGG - chr4_4:41386102-41386121 None:intergenic 25.0%
!! ATTTTTGTAAAATGGTATGC+AGG + chr4_4:41386124-41386143 Msa0681250:intron 25.0%
!! TTTTTGTAAAATGGTATGCA+GGG + chr4_4:41386125-41386144 Msa0681250:intron 25.0%
! ACTTTGTAAATGTAAGCATA+AGG - chr4_4:41386171-41386190 None:intergenic 25.0%
! TGTTCTCAATGAAGAAAATA+GGG + chr4_4:41386322-41386341 Msa0681250:CDS 25.0%
!!! TCTCTTTTGTTTTTCTTTTC+AGG + chr4_4:41386575-41386594 Msa0681250:intron 25.0%
! CATAAAGAACATATTCAATC+AGG - chr4_4:41386740-41386759 None:intergenic 25.0%
!!! ATTCTAGTTATTTGCTATAG+TGG + chr4_4:41386930-41386949 Msa0681250:intron 25.0%
! CATTTATATGTGGCAATTAT+AGG + chr4_4:41386958-41386977 Msa0681250:intron 25.0%
!!! AAGATTATTTTGTGTTTTGG+TGG + chr4_4:41387093-41387112 Msa0681250:intron 25.0%
! AAACTTGAAAACTATCTCAT+AGG - chr4_4:41387144-41387163 None:intergenic 25.0%
! TTTGTATGAAATAAAACAGC+AGG + chr4_4:41387161-41387180 Msa0681250:intron 25.0%
! ACATATGTAGAAAATTGTGT+AGG - chr4_4:41387417-41387436 None:intergenic 25.0%
!! CAATTTTCTACATATGTACA+TGG + chr4_4:41387420-41387439 Msa0681250:intron 25.0%
!! AATTCATTGATTGATCAGAA+AGG - chr4_4:41387594-41387613 None:intergenic 25.0%
!!! AATGAATTAGTTTTCTGACT+TGG + chr4_4:41387606-41387625 Msa0681250:intron 25.0%
!! AGATATTAGCCTAAAAGAAA+GGG - chr4_4:41387643-41387662 None:intergenic 25.0%
!! AAGATATTAGCCTAAAAGAA+AGG - chr4_4:41387644-41387663 None:intergenic 25.0%
! ATGAAAGGAAATAAAAGCAA+GGG - chr4_4:41387915-41387934 None:intergenic 25.0%
! AATGAAAGGAAATAAAAGCA+AGG - chr4_4:41387916-41387935 None:intergenic 25.0%
!! TAAAGGGTATACATAATGAA+AGG - chr4_4:41387930-41387949 None:intergenic 25.0%
! TCCAAGTATTTAACTAACTA+CGG + chr4_4:41387968-41387987 Msa0681250:intron 25.0%
! TAATCAGTTAGTAACAGAAT+TGG - chr4_4:41388019-41388038 None:intergenic 25.0%
! TATTCATATATTTCCAGAGA+GGG - chr4_4:41388063-41388082 None:intergenic 25.0%
! ATATATGAATAGGTGTCTTT+AGG + chr4_4:41388072-41388091 Msa0681250:intron 25.0%
!! TATTGATTATTTCCCAATGT+TGG + chr4_4:41388152-41388171 Msa0681250:intron 25.0%
! TTTAACTGAAACTATGACAA+CGG - chr4_4:41388222-41388241 None:intergenic 25.0%
! ATTAAAATAGTAGTCAATCC+CGG - chr4_4:41388596-41388615 None:intergenic 25.0%
!!! TATTATACACCGATTTCATT+TGG + chr4_4:41388625-41388644 Msa0681250:intron 25.0%
! TATGATGCATGAACAAATAT+GGG - chr4_4:41389061-41389080 None:intergenic 25.0%
! ATATGATGCATGAACAAATA+TGG - chr4_4:41389062-41389081 None:intergenic 25.0%
!!! TGAAGTAAATGTTTTTGAGA+AGG - chr4_4:41389661-41389680 None:intergenic 25.0%
! TCTCAAAAACATTTACTTCA+CGG + chr4_4:41389661-41389680 Msa0681250:intron 25.0%
!! AAACTTAGATTTAAAGCTTC+TGG + chr4_4:41389693-41389712 Msa0681250:intron 25.0%
! AATCCTTGTTCAAAAAAAGA+TGG + chr4_4:41389809-41389828 Msa0681250:intron 25.0%
! TTAATAAGATCGATGGTAAA+GGG - chr4_4:41390104-41390123 None:intergenic 25.0%
! CATAATGTTAATAAGATCGA+TGG - chr4_4:41390111-41390130 None:intergenic 25.0%
! TCGATCTTATTAACATTATG+TGG + chr4_4:41390111-41390130 Msa0681250:intron 25.0%
! TATTAACATTATGTGGTAGT+TGG + chr4_4:41390118-41390137 Msa0681250:intron 25.0%
! CAAATTCTTCAATCATGAAA+GGG - chr4_4:41390338-41390357 None:intergenic 25.0%
! CATAAAACATACCTTATTAC+AGG - chr4_4:41390422-41390441 None:intergenic 25.0%
!! CTGTAATAAGGTATGTTTTA+TGG + chr4_4:41390420-41390439 Msa0681250:intron 25.0%
! ATTTGTAGAAGACGATTTAT+TGG + chr4_4:41390533-41390552 Msa0681250:intron 25.0%
! GAATATATCCTTATCTAGAT+TGG - chr4_4:41390796-41390815 None:intergenic 25.0%
! AAGGATATATTCTGTACATT+CGG + chr4_4:41390804-41390823 Msa0681250:intron 25.0%
!! AGAGTTCCATATCTTAATTT+TGG + chr4_4:41390833-41390852 Msa0681250:intron 25.0%
! ACTATGACTTTATTCTTACA+CGG + chr4_4:41391338-41391357 Msa0681250:intron 25.0%
! AAAGCTCGAAAACAATTTAA+AGG + chr4_4:41391391-41391410 Msa0681250:CDS 25.0%
! AAGCTCGAAAACAATTTAAA+GGG + chr4_4:41391392-41391411 Msa0681250:CDS 25.0%
! AGATGAAAAAATTCTACTAC+CGG - chr4_4:41391605-41391624 None:intergenic 25.0%
!!! AGTAGAATTTTTTCATCTCT+TGG + chr4_4:41391607-41391626 Msa0681250:CDS 25.0%
!!! GTAGAATTTTTTCATCTCTT+GGG + chr4_4:41391608-41391627 Msa0681250:CDS 25.0%
!! GCCATAATACAATTTTCAAA+TGG + chr4_4:41391672-41391691 Msa0681250:three_prime_UTR 25.0%
!! TTTTAACAACTACTTCACTT+TGG - chr4_4:41391851-41391870 None:intergenic 25.0%
!!! TATTATTTTGACTTGATGTG+AGG + chr4_4:41391894-41391913 Msa0681250:three_prime_UTR 25.0%
! TGTAGAATTTTCCAAAATCC+TGG + chr4_4:41380223-41380242 Msa0681250:five_prime_UTR 30.0%
ATTTACAATAGCCATAACCA+GGG - chr4_4:41380282-41380301 None:intergenic 30.0%
TGTTAATGAAGTTCAGTAGA+TGG + chr4_4:41380584-41380603 Msa0681250:intron 30.0%
!!! TTTTACGTCTTTTAACTTGG+AGG + chr4_4:41380812-41380831 Msa0681250:intron 30.0%
!!! TGTTTTTTGTCTTGTGAGTT+TGG + chr4_4:41380888-41380907 Msa0681250:intron 30.0%
TTTATGTTAGAGAGTTGTCA+TGG + chr4_4:41380926-41380945 Msa0681250:intron 30.0%
!!! TGTTTTTTTTACCATGCCTA+AGG + chr4_4:41381128-41381147 Msa0681250:intron 30.0%
!!! GTTTTTTTTACCATGCCTAA+GGG + chr4_4:41381129-41381148 Msa0681250:intron 30.0%
AAAACAACTTACATTCCCAA+GGG - chr4_4:41381170-41381189 None:intergenic 30.0%
!! AGAATAACAAAAGCATCCTT+GGG + chr4_4:41381341-41381360 Msa0681250:intron 30.0%
AAATCTTGACTTAACTTCCT+TGG + chr4_4:41381370-41381389 Msa0681250:intron 30.0%
! ATTCCAATATTTTCTACAGC+AGG - chr4_4:41381439-41381458 None:intergenic 30.0%
!! TGCTGTATTTTTGTCTTCTA+CGG + chr4_4:41381507-41381526 Msa0681250:intron 30.0%
AACACCAATAAGACATGTAT+TGG + chr4_4:41381583-41381602 Msa0681250:CDS 30.0%
ACACCAATAAGACATGTATT+GGG + chr4_4:41381584-41381603 Msa0681250:CDS 30.0%
TTACCCAATACATGTCTTAT+TGG - chr4_4:41381590-41381609 None:intergenic 30.0%
!! GTGATTATTCTGAAATCATC+TGG + chr4_4:41381732-41381751 Msa0681250:intron 30.0%
GCAAATGAGGAAAATGAAAA+GGG - chr4_4:41381868-41381887 None:intergenic 30.0%
AGCAAATGAGGAAAATGAAA+AGG - chr4_4:41381869-41381888 None:intergenic 30.0%
! TGAACTGATAGAGTTTTTCA+AGG + chr4_4:41382093-41382112 Msa0681250:CDS 30.0%
AACGAAACCAAAAATTCATC+GGG - chr4_4:41382182-41382201 None:intergenic 30.0%
AAACTCAATCAGCTAATAAG+TGG - chr4_4:41382214-41382233 None:intergenic 30.0%
! TGATTTGGAAGTGGTTAAAA+AGG + chr4_4:41382511-41382530 Msa0681250:CDS 30.0%
!!! GAAGTTGACATCCTTATTTT+TGG + chr4_4:41382721-41382740 Msa0681250:intron 30.0%
TATACAATTTACACCATAGC+TGG + chr4_4:41382818-41382837 Msa0681250:intron 30.0%
ATACAATTTACACCATAGCT+GGG + chr4_4:41382819-41382838 Msa0681250:intron 30.0%
AATGTAACCAGGAAAACAAA+GGG - chr4_4:41382979-41382998 None:intergenic 30.0%
! TTTAAAATACTGCTTCATGC+AGG + chr4_4:41383073-41383092 Msa0681250:intron 30.0%
CTCTATCATGATATGAAACA+GGG - chr4_4:41383157-41383176 None:intergenic 30.0%
ACTCTATCATGATATGAAAC+AGG - chr4_4:41383158-41383177 None:intergenic 30.0%
! ATATTCACAGGAGATTGTTT+TGG + chr4_4:41383217-41383236 Msa0681250:intron 30.0%
!!! AGGAGATTGTTTTGGAAATT+TGG + chr4_4:41383225-41383244 Msa0681250:intron 30.0%
! GAAGTCTGATGATTTTTATC+TGG + chr4_4:41383554-41383573 Msa0681250:intron 30.0%
TTTCCAAATGTGAAGAAGTA+TGG - chr4_4:41383645-41383664 None:intergenic 30.0%
CAGATCATAGCTGAAATATT+TGG - chr4_4:41383764-41383783 None:intergenic 30.0%
ACTTCAGAATCTTCTATAAC+AGG - chr4_4:41384075-41384094 None:intergenic 30.0%
! CTTTTTGCATTCCTTAAACA+TGG + chr4_4:41384340-41384359 Msa0681250:intron 30.0%
AAATTACTGCACCATGTTTA+AGG - chr4_4:41384354-41384373 None:intergenic 30.0%
!!! TTTTTTGTGAAGTAGCCTAA+TGG + chr4_4:41384585-41384604 Msa0681250:intron 30.0%
TGAAAATTCTGCCTTAATTG+CGG + chr4_4:41384724-41384743 Msa0681250:intron 30.0%
!! TTACAAAATGAAAGTGTTGG+AGG - chr4_4:41384776-41384795 None:intergenic 30.0%
! TCCAACACTTTCATTTTGTA+AGG + chr4_4:41384775-41384794 Msa0681250:intron 30.0%
! TCCTTACAAAATGAAAGTGT+TGG - chr4_4:41384779-41384798 None:intergenic 30.0%
! TCATTTTGTAAGGATGAGTT+AGG + chr4_4:41384785-41384804 Msa0681250:intron 30.0%
TCCACAAATGAGAAAATGAA+AGG + chr4_4:41384922-41384941 Msa0681250:intron 30.0%
! ACCTTTCATTTTCTCATTTG+TGG - chr4_4:41384926-41384945 None:intergenic 30.0%
TTGAATACAGCATAACTTCT+AGG + chr4_4:41384945-41384964 Msa0681250:intron 30.0%
TGAATACAGCATAACTTCTA+GGG + chr4_4:41384946-41384965 Msa0681250:intron 30.0%
AAAGAAAAGAAGGTAGGAAT+GGG - chr4_4:41385066-41385085 None:intergenic 30.0%
AAAGAAAGCTAAAGACTTAG+AGG + chr4_4:41385272-41385291 Msa0681250:intron 30.0%
AAGAAAGCTAAAGACTTAGA+GGG + chr4_4:41385273-41385292 Msa0681250:intron 30.0%
ATTAGATACATTCTCAGAGT+AGG + chr4_4:41385310-41385329 Msa0681250:intron 30.0%
! GGTATTTTGTACATGAAATG+TGG + chr4_4:41385630-41385649 Msa0681250:intron 30.0%
! TTTTCTTCTACCAAGATGTT+TGG + chr4_4:41385787-41385806 Msa0681250:intron 30.0%
ATGAAAACTGAGAAAAGGAA+AGG - chr4_4:41386097-41386116 None:intergenic 30.0%
ACTGAACATAAATGATCAAC+TGG - chr4_4:41386201-41386220 None:intergenic 30.0%
! AACAATAGGTGATTTTCCAA+TGG + chr4_4:41386253-41386272 Msa0681250:intron 30.0%
TCTACTTCATGTTCATTACA+AGG + chr4_4:41386295-41386314 Msa0681250:CDS 30.0%
CTACTTCATGTTCATTACAA+GGG + chr4_4:41386296-41386315 Msa0681250:CDS 30.0%
CTGTTCTCAATGAAGAAAAT+AGG + chr4_4:41386321-41386340 Msa0681250:CDS 30.0%
ATAAGTGTAAAATGGAACGT+TGG - chr4_4:41386441-41386460 None:intergenic 30.0%
TTTAAATAAGCGATCATGCA+TGG - chr4_4:41386499-41386518 None:intergenic 30.0%
ATGAAGTGCATGAAAATGAA+AGG - chr4_4:41386529-41386548 None:intergenic 30.0%
AACTTATCATAAGCATAGTC+TGG - chr4_4:41386669-41386688 None:intergenic 30.0%
ATGCTTATGATAAGTTTCCA+AGG + chr4_4:41386673-41386692 Msa0681250:CDS 30.0%
TAAAAGTTCATCAACAACCT+TGG - chr4_4:41386693-41386712 None:intergenic 30.0%
!! AAGGTTGTTGATGAACTTTT+AGG + chr4_4:41386692-41386711 Msa0681250:intron 30.0%
ATCATAGAACAAAATCACAG+TGG - chr4_4:41386769-41386788 None:intergenic 30.0%
!!! TCTATCTTTTGAAATGCCAA+AGG + chr4_4:41386884-41386903 Msa0681250:CDS 30.0%
!!! TGCCAAACTTGTTTTTGATA+CGG - chr4_4:41387028-41387047 None:intergenic 30.0%
CTCATAGGAGAATATTTGTA+TGG - chr4_4:41387129-41387148 None:intergenic 30.0%
TTAATATGCCTGATGCATTA+CGG + chr4_4:41387300-41387319 Msa0681250:intron 30.0%
AGCTGAAAATATCAGAAACA+CGG + chr4_4:41387379-41387398 Msa0681250:CDS 30.0%
! AGATTAGTTGACAATGTGAT+AGG + chr4_4:41387776-41387795 Msa0681250:intron 30.0%
AGAAATTCTATTACACCCTA+GGG + chr4_4:41387836-41387855 Msa0681250:intron 30.0%
! AAATAAAAGCAAGGGGTTTT+CGG - chr4_4:41387907-41387926 None:intergenic 30.0%
TGAAAGGAAATAAAAGCAAG+GGG - chr4_4:41387914-41387933 None:intergenic 30.0%
AATACTTGGATAGTTAGAGA+GGG - chr4_4:41387958-41387977 None:intergenic 30.0%
AAATACTTGGATAGTTAGAG+AGG - chr4_4:41387959-41387978 None:intergenic 30.0%
! GTTTGAAACTGTAGATTAGA+CGG - chr4_4:41387994-41388013 None:intergenic 30.0%
ATTCATATATTTCCAGAGAG+GGG - chr4_4:41388062-41388081 None:intergenic 30.0%
CTATTCATATATTTCCAGAG+AGG - chr4_4:41388064-41388083 None:intergenic 30.0%
! CTCTCTGGAAATATATGAAT+AGG + chr4_4:41388062-41388081 Msa0681250:intron 30.0%
AATGAACTACTACCAACATT+GGG - chr4_4:41388167-41388186 None:intergenic 30.0%
AAATGAACTACTACCAACAT+TGG - chr4_4:41388168-41388187 None:intergenic 30.0%
!!! GGTAGTAGTTCATTTTTTGT+AGG + chr4_4:41388173-41388192 Msa0681250:intron 30.0%
TTCTGTGTTTAAGTAGTCAA+TGG + chr4_4:41388242-41388261 Msa0681250:intron 30.0%
AAATCAAATAGCAGCTAAAG+CGG - chr4_4:41388387-41388406 None:intergenic 30.0%
!! AGCTGCTATTTGATTTTAGT+TGG + chr4_4:41388391-41388410 Msa0681250:intron 30.0%
!!! AAACTTTTTTGAGGGCATTT+TGG + chr4_4:41388440-41388459 Msa0681250:intron 30.0%
!!! AACTTTTTTGAGGGCATTTT+GGG + chr4_4:41388441-41388460 Msa0681250:intron 30.0%
TTCTGATAGCCAAATGAAAT+CGG - chr4_4:41388637-41388656 None:intergenic 30.0%
AGGAAAATATGAACTTGCAA+AGG + chr4_4:41388701-41388720 Msa0681250:CDS 30.0%
! TGTGTTCTTATTTATTGCAG+AGG + chr4_4:41388786-41388805 Msa0681250:intron 30.0%
!! GTTTTAGATAGTGCAGTTTT+AGG + chr4_4:41388817-41388836 Msa0681250:intron 30.0%
GATTATATCTCTAGTCTATG+TGG - chr4_4:41388879-41388898 None:intergenic 30.0%
TAATCAAATCAGTCCTCATA+AGG + chr4_4:41388894-41388913 Msa0681250:intron 30.0%
! ACATATTGAGCTAGGTTTTA+GGG + chr4_4:41388931-41388950 Msa0681250:intron 30.0%
ACCAATAACATATCGAGAAT+AGG - chr4_4:41388981-41389000 None:intergenic 30.0%
TTGTTCATGCATCATATATG+AGG + chr4_4:41389065-41389084 Msa0681250:intron 30.0%
TGTTCATGCATCATATATGA+GGG + chr4_4:41389066-41389085 Msa0681250:intron 30.0%
!!! GACATCTTTTAGCTAGTTTT+TGG + chr4_4:41389145-41389164 Msa0681250:intron 30.0%
ACTGATAAGATTTGCATCTA+AGG + chr4_4:41389190-41389209 Msa0681250:intron 30.0%
! AATGATAACCCTGAGTATTT+TGG - chr4_4:41389306-41389325 None:intergenic 30.0%
!! TCAGGGTTATCATTTTTACA+TGG + chr4_4:41389312-41389331 Msa0681250:intron 30.0%
!! ACTGGCTTACTCTTTTATTT+GGG - chr4_4:41389432-41389451 None:intergenic 30.0%
TGACCTAATTATTGTTTGGA+AGG + chr4_4:41389506-41389525 Msa0681250:intron 30.0%
CTTCCTTCCAAACAATAATT+AGG - chr4_4:41389512-41389531 None:intergenic 30.0%
!! TTTTTGAGAAGGAAGATATG+AGG - chr4_4:41389650-41389669 None:intergenic 30.0%
!!! GGGATGGTTTTATGTATTTA+CGG - chr4_4:41389724-41389743 None:intergenic 30.0%
! TTATGTAATGGGGTAACTAT+GGG - chr4_4:41389744-41389763 None:intergenic 30.0%
! ATTATGTAATGGGGTAACTA+TGG - chr4_4:41389745-41389764 None:intergenic 30.0%
AAATCCTAGCACAGAAAATT+TGG - chr4_4:41389934-41389953 None:intergenic 30.0%
TCTACATCTTAATGATCACT+TGG + chr4_4:41390054-41390073 Msa0681250:intron 30.0%
!!! GGATTTTTGTTTTTCACTCA+AGG + chr4_4:41390075-41390094 Msa0681250:intron 30.0%
GTTAATAAGATCGATGGTAA+AGG - chr4_4:41390105-41390124 None:intergenic 30.0%
CAATCTATCAGTCATAAGTT+AGG - chr4_4:41390290-41390309 None:intergenic 30.0%
! ATGACTGATAGATTGATTTC+TGG + chr4_4:41390295-41390314 Msa0681250:intron 30.0%
GCAAATTCTTCAATCATGAA+AGG - chr4_4:41390339-41390358 None:intergenic 30.0%
! GCAGCCTTTATTTATTTCAT+TGG + chr4_4:41390456-41390475 Msa0681250:intron 30.0%
GAATGGCATATAGCAATAAT+TGG + chr4_4:41390496-41390515 Msa0681250:intron 30.0%
TTAAGAAGTTCCAATTACGA+TGG + chr4_4:41390604-41390623 Msa0681250:intron 30.0%
ATGACAACATGAATCACAAA+GGG - chr4_4:41390706-41390725 None:intergenic 30.0%
TGTATATATGGTAGGAATCA+TGG - chr4_4:41390733-41390752 None:intergenic 30.0%
! TATATATGTTTGAGACGTCA+TGG + chr4_4:41391179-41391198 Msa0681250:intron 30.0%
! ATATATGTTTGAGACGTCAT+GGG + chr4_4:41391180-41391199 Msa0681250:intron 30.0%
!! ACGGATATCGATTAATTTGT+AGG + chr4_4:41391357-41391376 Msa0681250:intron 30.0%
GAAAATTGTATTATGGCCAA+TGG - chr4_4:41391669-41391688 None:intergenic 30.0%
ACTGAACACAAATTTATTCC+TGG - chr4_4:41391751-41391770 None:intergenic 30.0%
GTTTAGTGCAATGAAAAAGA+TGG + chr4_4:41391928-41391947 Msa0681250:three_prime_UTR 30.0%
! TGCAATGAAAAAGATGGATT+TGG + chr4_4:41391934-41391953 Msa0681250:three_prime_UTR 30.0%
CCAAAATTAAATCCCATAAG+AGG - chr4_4:41391962-41391981 None:intergenic 30.0%
!! CCTCTTATGGGATTTAATTT+TGG + chr4_4:41391959-41391978 Msa0681250:three_prime_UTR 30.0%
!! ATTTTGGCATAGTTTTCCAT+TGG + chr4_4:41391975-41391994 Msa0681250:three_prime_UTR 30.0%
ATTATCATAACTTAGGCCAA+TGG - chr4_4:41391994-41392013 None:intergenic 30.0%
! AGAAAATGAGACCAGGATTT+TGG - chr4_4:41380237-41380256 None:intergenic 35.0%
TGAACAAAGAAAATGAGACC+AGG - chr4_4:41380244-41380263 None:intergenic 35.0%
CATTTACAATAGCCATAACC+AGG - chr4_4:41380283-41380302 None:intergenic 35.0%
AGGAAGAAGAAAATTGTAGC+TGG + chr4_4:41380365-41380384 Msa0681250:CDS 35.0%
GGAAGAAGAAAATTGTAGCT+GGG + chr4_4:41380366-41380385 Msa0681250:CDS 35.0%
! ATGAAAGCTTTGATTAGACC+TGG + chr4_4:41380395-41380414 Msa0681250:CDS 35.0%
!! ATGCGATTTTAATCTGCATG+TGG + chr4_4:41380781-41380800 Msa0681250:intron 35.0%
!!! AGTTTGTTTTGTCAACTGCT+AGG + chr4_4:41380967-41380986 Msa0681250:intron 35.0%
!!! GTTTGTTTTGTCAACTGCTA+GGG + chr4_4:41380968-41380987 Msa0681250:intron 35.0%
! TGGAATGATTTGGGAATACT+AGG + chr4_4:41381023-41381042 Msa0681250:intron 35.0%
! TTGAGCATGTTCTTTTCCTA+GGG - chr4_4:41381100-41381119 None:intergenic 35.0%
CAAAACAACTTACATTCCCA+AGG - chr4_4:41381171-41381190 None:intergenic 35.0%
! CTTGGGAATGTAAGTTGTTT+TGG + chr4_4:41381169-41381188 Msa0681250:intron 35.0%
!!! AGGATGCTTTTGTTATTCTC+AGG - chr4_4:41381340-41381359 None:intergenic 35.0%
!! GAGAATAACAAAAGCATCCT+TGG + chr4_4:41381340-41381359 Msa0681250:intron 35.0%
! GTCAAGATTTTGTAATCCCA+AGG - chr4_4:41381360-41381379 None:intergenic 35.0%
ACACCTGCTGTAGAAAATAT+TGG + chr4_4:41381433-41381452 Msa0681250:intron 35.0%
TCTACGGTAGACATAATTGA+TGG + chr4_4:41381523-41381542 Msa0681250:intron 35.0%
CTACGGTAGACATAATTGAT+GGG + chr4_4:41381524-41381543 Msa0681250:intron 35.0%
GGTAAAAGCAAGATGCTATT+GGG + chr4_4:41381605-41381624 Msa0681250:CDS 35.0%
AGGAATTCCAACAATGTTGA+AGG + chr4_4:41381637-41381656 Msa0681250:CDS 35.0%
GGAATTCCAACAATGTTGAA+GGG + chr4_4:41381638-41381657 Msa0681250:CDS 35.0%
ACTATGTTAGTGGTTTCCAT+TGG + chr4_4:41381789-41381808 Msa0681250:intron 35.0%
CTATGTTAGTGGTTTCCATT+GGG + chr4_4:41381790-41381809 Msa0681250:intron 35.0%
TATGTTAGTGGTTTCCATTG+GGG + chr4_4:41381791-41381810 Msa0681250:intron 35.0%
TTCCTCATTTGCTTTCTGTT+AGG + chr4_4:41381876-41381895 Msa0681250:intron 35.0%
AAATGGAGTTCATCATCCTT+AGG - chr4_4:41382067-41382086 None:intergenic 35.0%
! TATCACTGATGATTTGGAAG+TGG + chr4_4:41382502-41382521 Msa0681250:CDS 35.0%
TGTTTGTGTTCCCATTATCT+TGG + chr4_4:41382579-41382598 Msa0681250:intron 35.0%
TATGAGCCATCCAAGATAAT+GGG - chr4_4:41382592-41382611 None:intergenic 35.0%
TTATGAGCCATCCAAGATAA+TGG - chr4_4:41382593-41382612 None:intergenic 35.0%
ATCTTGGATGGCTCATAAAA+TGG + chr4_4:41382595-41382614 Msa0681250:intron 35.0%
TGTGGTTGTGATTGCATTAT+TGG + chr4_4:41382783-41382802 Msa0681250:intron 35.0%
GTGGTTGTGATTGCATTATT+GGG + chr4_4:41382784-41382803 Msa0681250:intron 35.0%
GGTGTAAATTGTATAACACC+TGG - chr4_4:41382813-41382832 None:intergenic 35.0%
! GGATAGGTCATATCGATTAT+AGG + chr4_4:41382846-41382865 Msa0681250:intron 35.0%
ATGTAACCAGGAAAACAAAG+GGG - chr4_4:41382978-41382997 None:intergenic 35.0%
CAATGTAACCAGGAAAACAA+AGG - chr4_4:41382980-41382999 None:intergenic 35.0%
CATTGCAACTACCAAATTGT+TGG + chr4_4:41382995-41383014 Msa0681250:intron 35.0%
GATCACATTGACCAACAATT+TGG - chr4_4:41383009-41383028 None:intergenic 35.0%
GTCATTAAAAATGCACTCAC+AGG - chr4_4:41383102-41383121 None:intergenic 35.0%
!! AGAGTTCAATTTTGACGTGT+AGG + chr4_4:41383173-41383192 Msa0681250:intron 35.0%
TCAACAAGTCATAACGAGAA+AGG + chr4_4:41383342-41383361 Msa0681250:intron 35.0%
! TAACATCCCTTTTTGCAGAA+AGG + chr4_4:41383378-41383397 Msa0681250:intron 35.0%
TGTACACCTTTCTGCAAAAA+GGG - chr4_4:41383387-41383406 None:intergenic 35.0%
ATGTACACCTTTCTGCAAAA+AGG - chr4_4:41383388-41383407 None:intergenic 35.0%
TTCACTTCATAAGGTTCTCT+TGG - chr4_4:41383472-41383491 None:intergenic 35.0%
AAGAGAACCTTATGAAGTGA+AGG + chr4_4:41383471-41383490 Msa0681250:CDS 35.0%
TATACTGCCTTACATGAACA+AGG - chr4_4:41383523-41383542 None:intergenic 35.0%
TGTAAGGCAGTATAATGCAT+TGG + chr4_4:41383529-41383548 Msa0681250:intron 35.0%
ATTTCAGCAAAGACAGTTAC+TGG + chr4_4:41383588-41383607 Msa0681250:CDS 35.0%
GAACCATACTTCTTCACATT+TGG + chr4_4:41383639-41383658 Msa0681250:CDS 35.0%
CTTCACATTTGGAAAATCAG+AGG + chr4_4:41383650-41383669 Msa0681250:CDS 35.0%
ATTTCAGCTATGATCTGATG+TGG + chr4_4:41383767-41383786 Msa0681250:intron 35.0%
!! TTTTCTAGGCATTGTTGTGT+TGG + chr4_4:41383872-41383891 Msa0681250:intron 35.0%
GTACCTAAAGGTCTTGAAAT+GGG + chr4_4:41383973-41383992 Msa0681250:CDS 35.0%
TACCTAAAGGTCTTGAAATG+GGG + chr4_4:41383974-41383993 Msa0681250:CDS 35.0%
!! ACACTGAAAGGTTTTGGTAT+TGG + chr4_4:41384383-41384402 Msa0681250:intron 35.0%
!! CACTGAAAGGTTTTGGTATT+GGG + chr4_4:41384384-41384403 Msa0681250:intron 35.0%
!! ACTGAAAGGTTTTGGTATTG+GGG + chr4_4:41384385-41384404 Msa0681250:intron 35.0%
ATTTCACTTTCTAGGCTTGA+TGG + chr4_4:41384437-41384456 Msa0681250:intron 35.0%
TTAAAACTCAGACATGGCTA+TGG + chr4_4:41384484-41384503 Msa0681250:intron 35.0%
TAAAACTCAGACATGGCTAT+GGG + chr4_4:41384485-41384504 Msa0681250:intron 35.0%
!! CACCTTAATGGGTGAAATTT+TGG - chr4_4:41384611-41384630 None:intergenic 35.0%
ACCCATTAAGGTGAATAAGT+GGG + chr4_4:41384618-41384637 Msa0681250:intron 35.0%
TAGGAACATTGCAATATGCA+GGG - chr4_4:41384667-41384686 None:intergenic 35.0%
ACCAAAATGTCTCGTAACTT+GGG - chr4_4:41384859-41384878 None:intergenic 35.0%
TACCAAAATGTCTCGTAACT+TGG - chr4_4:41384860-41384879 None:intergenic 35.0%
!! TTCGGTGAGTGAGTTTTATA+GGG - chr4_4:41384996-41385015 None:intergenic 35.0%
!! ATTCGGTGAGTGAGTTTTAT+AGG - chr4_4:41384997-41385016 None:intergenic 35.0%
CAAAGAAAAGAAGGTAGGAA+TGG - chr4_4:41385067-41385086 None:intergenic 35.0%
! TCCTACCTTCTTTTCTTTGT+TGG + chr4_4:41385068-41385087 Msa0681250:intron 35.0%
CTATGCCAACAAAGAAAAGA+AGG - chr4_4:41385076-41385095 None:intergenic 35.0%
ACATACTTAACTGAGACAAG+AGG + chr4_4:41385202-41385221 Msa0681250:intron 35.0%
GGTTATACTCGATTCCAAAA+AGG - chr4_4:41385352-41385371 None:intergenic 35.0%
CCTGATTGAAAAATGGTGTT+CGG - chr4_4:41385396-41385415 None:intergenic 35.0%
AAGAAAAGTTAACATCGCCA+TGG - chr4_4:41385507-41385526 None:intergenic 35.0%
TTCATAGTCATTCAAAGACC+TGG + chr4_4:41385706-41385725 Msa0681250:intron 35.0%
AATTCACATGCCAAACATCT+TGG - chr4_4:41385800-41385819 None:intergenic 35.0%
CTTGCTGGAATTATATCAAC+AGG + chr4_4:41385822-41385841 Msa0681250:intron 35.0%
TGGAATTATATCAACAGGTG+AGG + chr4_4:41385827-41385846 Msa0681250:intron 35.0%
GGAATTATATCAACAGGTGA+GGG + chr4_4:41385828-41385847 Msa0681250:intron 35.0%
!!! CTGTGTTTTTTGTATGCTAC+TGG - chr4_4:41385931-41385950 None:intergenic 35.0%
TGGCTAAAGAGAAATCATGA+AGG - chr4_4:41385966-41385985 None:intergenic 35.0%
ATGAAGTAGACTGTCATGAA+GGG - chr4_4:41386285-41386304 None:intergenic 35.0%
!!! TTTTTCTTTTCAGGTACCAG+AGG + chr4_4:41386584-41386603 Msa0681250:intron 35.0%
!!! TTTTCTTTTCAGGTACCAGA+GGG + chr4_4:41386585-41386604 Msa0681250:intron 35.0%
TTATCATAAGCATAGTCTGG+CGG - chr4_4:41386666-41386685 None:intergenic 35.0%
AGTGGATGCACATTTATATG+TGG + chr4_4:41386948-41386967 Msa0681250:intron 35.0%
! CAATACCACAGCATTTTTGT+TGG - chr4_4:41386985-41387004 None:intergenic 35.0%
GACCGTATCAAAAACAAGTT+TGG + chr4_4:41387023-41387042 Msa0681250:intron 35.0%
!!! TTTTGTGTTTTGGTGGAGTT+AGG + chr4_4:41387100-41387119 Msa0681250:intron 35.0%
! TAATAACCCTCAACCCATTT+TGG + chr4_4:41387246-41387265 Msa0681250:intron 35.0%
!! TAGAAACCAAAATGGGTTGA+GGG - chr4_4:41387255-41387274 None:intergenic 35.0%
!! ATAGAAACCAAAATGGGTTG+AGG - chr4_4:41387256-41387275 None:intergenic 35.0%
! TCTGTGTTTTGTGCAAAGTA+TGG + chr4_4:41387477-41387496 Msa0681250:intron 35.0%
TTTGTGCAAAGTATGGAACA+AGG + chr4_4:41387484-41387503 Msa0681250:intron 35.0%
! ATTAGCCTAAAAGAAAGGGA+CGG - chr4_4:41387639-41387658 None:intergenic 35.0%
ATAGACAGCTAAGTTACCTA+TGG + chr4_4:41387724-41387743 Msa0681250:intron 35.0%
AATGCATTCAGTGTAACCAT+AGG - chr4_4:41387743-41387762 None:intergenic 35.0%
CAGAAATTCTATTACACCCT+AGG + chr4_4:41387835-41387854 Msa0681250:intron 35.0%
!! TTTTAGGGAGAAATTTAGGG+AGG - chr4_4:41387884-41387903 None:intergenic 35.0%
!!! CGGTTTTAGGGAGAAATTTA+GGG - chr4_4:41387887-41387906 None:intergenic 35.0%
!!! TCGGTTTTAGGGAGAAATTT+AGG - chr4_4:41387888-41387907 None:intergenic 35.0%
GCCGTAGTTAGTTAAATACT+TGG - chr4_4:41387972-41387991 None:intergenic 35.0%
TGTGTTTAAGTAGTCAATGG+TGG + chr4_4:41388245-41388264 Msa0681250:intron 35.0%
!!! ACTTTTTTGAGGGCATTTTG+GGG + chr4_4:41388442-41388461 Msa0681250:intron 35.0%
CTCATGCTGTAGTTATTACA+GGG + chr4_4:41388660-41388679 Msa0681250:intron 35.0%
TGTAGTTATTACAGGGTAAC+AGG + chr4_4:41388667-41388686 Msa0681250:intron 35.0%
TGCAAAGGCAAAGTATGAAA+AGG + chr4_4:41388716-41388735 Msa0681250:CDS 35.0%
AATTCCTCACATATTGAGCT+AGG + chr4_4:41388923-41388942 Msa0681250:intron 35.0%
AAAACCTAGCTCAATATGTG+AGG - chr4_4:41388930-41388949 None:intergenic 35.0%
! CACATATTGAGCTAGGTTTT+AGG + chr4_4:41388930-41388949 Msa0681250:intron 35.0%
GCCTATTCTCGATATGTTAT+TGG + chr4_4:41388977-41388996 Msa0681250:intron 35.0%
GTTCATGCATCATATATGAG+GGG + chr4_4:41389067-41389086 Msa0681250:intron 35.0%
AATCTTATCAGTTGCGCATT+AGG - chr4_4:41389182-41389201 None:intergenic 35.0%
AATTGTACTTAGCTAAACCG+TGG + chr4_4:41389231-41389250 Msa0681250:intron 35.0%
!!! GACTGGCTTACTCTTTTATT+TGG - chr4_4:41389433-41389452 None:intergenic 35.0%
TCACTGCTATTCTTTAACCT+CGG - chr4_4:41389489-41389508 None:intergenic 35.0%
GCAGTGACCTAATTATTGTT+TGG + chr4_4:41389502-41389521 Msa0681250:intron 35.0%
GAAAGATGAGATACATGTGA+TGG + chr4_4:41389531-41389550 Msa0681250:intron 35.0%
ATCTGTGTAATTCTGACCTA+CGG - chr4_4:41389560-41389579 None:intergenic 35.0%
AAGATATGAGGCACATAAGA+TGG - chr4_4:41389638-41389657 None:intergenic 35.0%
!!! GCTCCATCTTTTTTTGAACA+AGG - chr4_4:41389815-41389834 None:intergenic 35.0%
! TCTACCAAATTTTCTGTGCT+AGG + chr4_4:41389927-41389946 Msa0681250:intron 35.0%
TACCTTATTACAGGTCTCAA+TGG - chr4_4:41390413-41390432 None:intergenic 35.0%
ACAGAAAACTCCATCGTAAT+TGG - chr4_4:41390617-41390636 None:intergenic 35.0%
! AAGTGGGTTTGAAATAATGC+AGG - chr4_4:41390674-41390693 None:intergenic 35.0%
CAAAGGGAAGTAGTTTAAGT+GGG - chr4_4:41390690-41390709 None:intergenic 35.0%
ACAAAGGGAAGTAGTTTAAG+TGG - chr4_4:41390691-41390710 None:intergenic 35.0%
CATGACAACATGAATCACAA+AGG - chr4_4:41390707-41390726 None:intergenic 35.0%
CTTTGTGATTCATGTTGTCA+TGG + chr4_4:41390705-41390724 Msa0681250:intron 35.0%
GATTCAGTCCAATCTAGATA+AGG + chr4_4:41390785-41390804 Msa0681250:intron 35.0%
CGACAGCCAAAATTAAGATA+TGG - chr4_4:41390842-41390861 None:intergenic 35.0%
!! ATTTGCTTCTAAAACCTGCA+TGG - chr4_4:41390884-41390903 None:intergenic 35.0%
!! ATGGAGATTTTGAAGAAGCA+AGG + chr4_4:41390953-41390972 Msa0681250:CDS 35.0%
!! TGGAGATTTTGAAGAAGCAA+GGG + chr4_4:41390954-41390973 Msa0681250:CDS 35.0%
! CACACAATTGACTTCAGAAA+CGG - chr4_4:41391043-41391062 None:intergenic 35.0%
! TATATGTTTGAGACGTCATG+GGG + chr4_4:41391181-41391200 Msa0681250:intron 35.0%
! TTGGTAATTACTCCTTCGTT+CGG - chr4_4:41391268-41391287 None:intergenic 35.0%
TAAAGTCATAGTGTTTCCTG+CGG - chr4_4:41391330-41391349 None:intergenic 35.0%
TTAACTTCTGCAATTTCTCC+AGG - chr4_4:41391433-41391452 None:intergenic 35.0%
GAAAAAATTCTACTACCGGT+AGG - chr4_4:41391601-41391620 None:intergenic 35.0%
ATGGATTTGGATCCTCTTAT+GGG + chr4_4:41391947-41391966 Msa0681250:three_prime_UTR 35.0%
CAACAACCTTCTAAATACCC+TGG + chr4_4:41380262-41380281 Msa0681250:five_prime_UTR 40.0%
! CCATAACCAGGGTATTTAGA+AGG - chr4_4:41380271-41380290 None:intergenic 40.0%
CCTTCTAAATACCCTGGTTA+TGG + chr4_4:41380268-41380287 Msa0681250:exon 40.0%
TCAGTAGGTGGTTTCTTCTT+CGG - chr4_4:41380335-41380354 None:intergenic 40.0%
! TTCCTTTTCTCATCCTCAGT+AGG - chr4_4:41380350-41380369 None:intergenic 40.0%
! AAAGCTTTGATTAGACCTGG+TGG + chr4_4:41380398-41380417 Msa0681250:CDS 40.0%
TGTGGAGTGATAGATAACCT+GGG - chr4_4:41380707-41380726 None:intergenic 40.0%
TTGTGGAGTGATAGATAACC+TGG - chr4_4:41380708-41380727 None:intergenic 40.0%
TCACTCCACAATTCGAACTT+TGG + chr4_4:41380717-41380736 Msa0681250:CDS 40.0%
TCCACAATTCGAACTTTGGA+TGG + chr4_4:41380721-41380740 Msa0681250:CDS 40.0%
TCCATCCAAAGTTCGAATTG+TGG - chr4_4:41380725-41380744 None:intergenic 40.0%
AAATCGCATACCTCCATGTT+CGG - chr4_4:41380770-41380789 None:intergenic 40.0%
GAATACTAGGTTCTTGTGTG+TGG + chr4_4:41381036-41381055 Msa0681250:intron 40.0%
! CTTGAGCATGTTCTTTTCCT+AGG - chr4_4:41381101-41381120 None:intergenic 40.0%
AAAGTAAGAAACGCACCCTT+AGG - chr4_4:41381147-41381166 None:intergenic 40.0%
TGCGTTTCTTACTTTCCCTT+GGG + chr4_4:41381152-41381171 Msa0681250:intron 40.0%
ACAATGTAGCATGAGGAAGT+TGG - chr4_4:41381220-41381239 None:intergenic 40.0%
GGAAGAAACAATGTAGCATG+AGG - chr4_4:41381227-41381246 None:intergenic 40.0%
TGTCTCAAACTCTCAAACCA+AGG - chr4_4:41381390-41381409 None:intergenic 40.0%
! CTCGTTTTCATCATTGCAAC+AGG + chr4_4:41381554-41381573 Msa0681250:intron 40.0%
TTTCATCATTGCAACAGGCA+AGG + chr4_4:41381559-41381578 Msa0681250:intron 40.0%
TTCATCATTGCAACAGGCAA+GGG + chr4_4:41381560-41381579 Msa0681250:intron 40.0%
GGGTAAAAGCAAGATGCTAT+TGG + chr4_4:41381604-41381623 Msa0681250:CDS 40.0%
ACTTCACCCTTCAACATTGT+TGG - chr4_4:41381647-41381666 None:intergenic 40.0%
AACAATGTTGAAGGGTGAAG+TGG + chr4_4:41381646-41381665 Msa0681250:CDS 40.0%
! GGCTTTGATGGATCTTTAGT+TGG + chr4_4:41381817-41381836 Msa0681250:intron 40.0%
TGGATCTTTAGTTGGATACG+AGG + chr4_4:41381825-41381844 Msa0681250:intron 40.0%
CACCTAACAGAAAGCAAATG+AGG - chr4_4:41381881-41381900 None:intergenic 40.0%
CTCATTTGCTTTCTGTTAGG+TGG + chr4_4:41381879-41381898 Msa0681250:intron 40.0%
ATGAAGCCTCAGTTGCATTA+TGG + chr4_4:41382004-41382023 Msa0681250:CDS 40.0%
TCATCCTTAGGAAAACCATC+AGG - chr4_4:41382055-41382074 None:intergenic 40.0%
!!! GATAGAGTTTTTCAAGGCCA+AGG + chr4_4:41382099-41382118 Msa0681250:CDS 40.0%
!!! AGTTTTTCAAGGCCAAGGTA+AGG + chr4_4:41382104-41382123 Msa0681250:intron 40.0%
CAAAGATCACATCCTTACCT+TGG - chr4_4:41382119-41382138 None:intergenic 40.0%
AAACCAGTACTGCAGTACTA+AGG - chr4_4:41382379-41382398 None:intergenic 40.0%
CCAAATCATCAGTGATAACC+TGG - chr4_4:41382499-41382518 None:intergenic 40.0%
CCAGGTTATCACTGATGATT+TGG + chr4_4:41382496-41382515 Msa0681250:intron 40.0%
TGTGTTCCCATTATCTTGGA+TGG + chr4_4:41382583-41382602 Msa0681250:intron 40.0%
GATTGCATTATTGGGAATCC+AGG + chr4_4:41382792-41382811 Msa0681250:intron 40.0%
TTTACACCATAGCTGGGTTT+AGG + chr4_4:41382825-41382844 Msa0681250:intron 40.0%
TTCTGTGTGAGTGGATATCA+CGG - chr4_4:41382928-41382947 None:intergenic 40.0%
! AACTCCAACCTTTTAACCCA+AGG + chr4_4:41382950-41382969 Msa0681250:intron 40.0%
! TTGGTAGTTGCAATGTAACC+AGG - chr4_4:41382990-41383009 None:intergenic 40.0%
TTAGTGTAGGTTGTACGTGA+AGG + chr4_4:41383430-41383449 Msa0681250:intron 40.0%
TAGTGTAGGTTGTACGTGAA+GGG + chr4_4:41383431-41383450 Msa0681250:intron 40.0%
AACCTTATGAAGTGAAGGCT+TGG + chr4_4:41383476-41383495 Msa0681250:CDS 40.0%
TACCAAGCCTTCACTTCATA+AGG - chr4_4:41383481-41383500 None:intergenic 40.0%
GCTTTCACCTTGTTCATGTA+AGG + chr4_4:41383513-41383532 Msa0681250:intron 40.0%
AAGGCAGTATAATGCATTGG+TGG + chr4_4:41383532-41383551 Msa0681250:intron 40.0%
TTGATCATGTCACACACAGA+AGG + chr4_4:41383615-41383634 Msa0681250:CDS 40.0%
GGAAATAAAAAGTTTGGGCG+CGG - chr4_4:41383793-41383812 None:intergenic 40.0%
AGGGTAATCACCAAATGCAA+GGG - chr4_4:41383939-41383958 None:intergenic 40.0%
TGATACACTCAGGTACCTAA+AGG + chr4_4:41383961-41383980 Msa0681250:intron 40.0%
GGTACCTAAAGGTCTTGAAA+TGG + chr4_4:41383972-41383991 Msa0681250:intron 40.0%
ATCCCCATTTCAAGACCTTT+AGG - chr4_4:41383979-41383998 None:intergenic 40.0%
AAAGGTCTTGAAATGGGGAT+CGG + chr4_4:41383979-41383998 Msa0681250:CDS 40.0%
TCTTCTATAACAGGCATCAG+AGG - chr4_4:41384066-41384085 None:intergenic 40.0%
!! TTCTGAAGTCCAGTTTGAAG+TGG + chr4_4:41384086-41384105 Msa0681250:CDS 40.0%
!! TGGGTGAAATTTTGGCCATT+AGG - chr4_4:41384603-41384622 None:intergenic 40.0%
GGCCAAAATTTCACCCATTA+AGG + chr4_4:41384606-41384625 Msa0681250:intron 40.0%
CACCCATTAAGGTGAATAAG+TGG + chr4_4:41384617-41384636 Msa0681250:intron 40.0%
CCCCACTTATTCACCTTAAT+GGG - chr4_4:41384622-41384641 None:intergenic 40.0%
CCCATTAAGGTGAATAAGTG+GGG + chr4_4:41384619-41384638 Msa0681250:intron 40.0%
TCCCCACTTATTCACCTTAA+TGG - chr4_4:41384623-41384642 None:intergenic 40.0%
AGGAACATTGCAATATGCAG+GGG - chr4_4:41384666-41384685 None:intergenic 40.0%
GTAGGAACATTGCAATATGC+AGG - chr4_4:41384668-41384687 None:intergenic 40.0%
! ACCCAAGTTACGAGACATTT+TGG + chr4_4:41384855-41384874 Msa0681250:intron 40.0%
!! AGTGAGTTTTATAGGGCCTT+CGG - chr4_4:41384989-41385008 None:intergenic 40.0%
CAGTTAGAAAGAGTGGTGAA+GGG - chr4_4:41385041-41385060 None:intergenic 40.0%
ACAGTTAGAAAGAGTGGTGA+AGG - chr4_4:41385042-41385061 None:intergenic 40.0%
ATGGGAACAGTTAGAAAGAG+TGG - chr4_4:41385048-41385067 None:intergenic 40.0%
GCCAACAAAGAAAAGAAGGT+AGG - chr4_4:41385072-41385091 None:intergenic 40.0%
AGGAAGACGTAAAGGTGATT+GGG + chr4_4:41385222-41385241 Msa0681250:intron 40.0%
!! CCGAACACCATTTTTCAATC+AGG + chr4_4:41385393-41385412 Msa0681250:intron 40.0%
TTGCAAGGAGGATGACTAAT+CGG + chr4_4:41385580-41385599 Msa0681250:intron 40.0%
! TGGCATGTGAATTTTCTTGC+TGG + chr4_4:41385807-41385826 Msa0681250:intron 40.0%
ATAAAACGTCGGATTCGTGA+TGG + chr4_4:41385874-41385893 Msa0681250:CDS 40.0%
GTATAACTCAAGCATGAGCA+AGG - chr4_4:41386038-41386057 None:intergenic 40.0%
TAAAATGGTATGCAGGGAGA+CGG + chr4_4:41386131-41386150 Msa0681250:intron 40.0%
TGAAGTAGACTGTCATGAAG+GGG - chr4_4:41386284-41386303 None:intergenic 40.0%
CATGAAGTAGACTGTCATGA+AGG - chr4_4:41386286-41386305 None:intergenic 40.0%
CAGAACAGAAATCCAATGGT+TGG - chr4_4:41386379-41386398 None:intergenic 40.0%
CAACCATTGGATTTCTGTTC+TGG + chr4_4:41386377-41386396 Msa0681250:CDS 40.0%
TCTCCAGAACAGAAATCCAA+TGG - chr4_4:41386383-41386402 None:intergenic 40.0%
!! TTGGATTTCTGTTCTGGAGA+AGG + chr4_4:41386383-41386402 Msa0681250:CDS 40.0%
GTGTAAAATGGAACGTTGGT+TGG - chr4_4:41386437-41386456 None:intergenic 40.0%
ACACACAATTCAAATCCCTC+TGG - chr4_4:41386603-41386622 None:intergenic 40.0%
TAGGACCAACAAAAATGCTG+TGG + chr4_4:41386977-41386996 Msa0681250:intron 40.0%
GATTATGTCCGTAATGCATC+AGG - chr4_4:41387311-41387330 None:intergenic 40.0%
ACGGACATAATCCCTATTAC+AGG + chr4_4:41387319-41387338 Msa0681250:intron 40.0%
CATAATCCCTATTACAGGAC+TGG + chr4_4:41387324-41387343 Msa0681250:intron 40.0%
GTCAAACATGCGTATGTACA+TGG + chr4_4:41387450-41387469 Msa0681250:intron 40.0%
AGTTGACAATGTGATAGGAC+TGG + chr4_4:41387781-41387800 Msa0681250:intron 40.0%
CTAGGTATCTCAAATCCCTA+GGG - chr4_4:41387854-41387873 None:intergenic 40.0%
ACTAGGTATCTCAAATCCCT+AGG - chr4_4:41387855-41387874 None:intergenic 40.0%
ATTTAGGGAGGAAAGGAACT+AGG - chr4_4:41387872-41387891 None:intergenic 40.0%
TTGGATAGTTAGAGAGGGAA+CGG - chr4_4:41387953-41387972 None:intergenic 40.0%
CCTGTAATAACTACAGCATG+AGG - chr4_4:41388662-41388681 None:intergenic 40.0%
CCTCATGCTGTAGTTATTAC+AGG + chr4_4:41388659-41388678 Msa0681250:intron 40.0%
GGTAACAGGTTGTTCAAAGA+AGG + chr4_4:41388681-41388700 Msa0681250:CDS 40.0%
! AGGAATTCTCAAGCCTTATG+AGG - chr4_4:41388910-41388929 None:intergenic 40.0%
!!! CTAGGTTTTAGGGTTGAGTT+AGG + chr4_4:41388941-41388960 Msa0681250:intron 40.0%
CCTGGAGAGTCAACAAATAT+GGG - chr4_4:41389007-41389026 None:intergenic 40.0%
ACCTGGAGAGTCAACAAATA+TGG - chr4_4:41389008-41389027 None:intergenic 40.0%
TCCAAATCCAACACCAACTA+GGG + chr4_4:41389092-41389111 Msa0681250:intron 40.0%
ATATAAAGCCTTCCCCTAGT+TGG - chr4_4:41389108-41389127 None:intergenic 40.0%
! CTAGGGGAAGGCTTTATATA+AGG + chr4_4:41389109-41389128 Msa0681250:intron 40.0%
!!! GCTAGTTTTTGGAGTTGTGT+AGG + chr4_4:41389156-41389175 Msa0681250:intron 40.0%
TTAGCTAAACCGTGGTGTAA+TGG + chr4_4:41389239-41389258 Msa0681250:intron 40.0%
!!! AACCCTGAGTATTTTGGCAA+GGG - chr4_4:41389300-41389319 None:intergenic 40.0%
!!! TAACCCTGAGTATTTTGGCA+AGG - chr4_4:41389301-41389320 None:intergenic 40.0%
! ACTAGTTTGAGTGAAATCCG+AGG + chr4_4:41389469-41389488 Msa0681250:intron 40.0%
! ATACATGTGATGGAATCCGT+AGG + chr4_4:41389541-41389560 Msa0681250:intron 40.0%
GGAACAGGAAAAGAGAACTA+TGG - chr4_4:41389617-41389636 None:intergenic 40.0%
TCTTTCTGATAGGTCGAAAC+TGG + chr4_4:41389855-41389874 Msa0681250:intron 40.0%
CTTTCTGATAGGTCGAAACT+GGG + chr4_4:41389856-41389875 Msa0681250:intron 40.0%
TTTCTGATAGGTCGAAACTG+GGG + chr4_4:41389857-41389876 Msa0681250:intron 40.0%
ATTATGTGGTAGTTGGCAAC+AGG + chr4_4:41390125-41390144 Msa0681250:intron 40.0%
TGTTAATCCACAAGATGACG+AGG + chr4_4:41390167-41390186 Msa0681250:CDS 40.0%
TTCTCCCAACTTTAGATAGC+AGG - chr4_4:41390380-41390399 None:intergenic 40.0%
GTCCATTGAGACCTGTAATA+AGG + chr4_4:41390408-41390427 Msa0681250:CDS 40.0%
TAAAGGCTGCATGATAGCTT+AGG - chr4_4:41390446-41390465 None:intergenic 40.0%
TAATGCAGGCTTCAGCAATA+AGG - chr4_4:41390660-41390679 None:intergenic 40.0%
TGTCGTCGTGTGTTCTTTAA+TGG + chr4_4:41390857-41390876 Msa0681250:intron 40.0%
! TGTTCTTTAATGGACCATGC+AGG + chr4_4:41390867-41390886 Msa0681250:intron 40.0%
AAAATCTCCATTGCCCATGT+AGG - chr4_4:41390944-41390963 None:intergenic 40.0%
! AGCAAGGGCTGATTTCAAAA+TGG + chr4_4:41390969-41390988 Msa0681250:CDS 40.0%
!! CGTTTCTGAAGTCAATTGTG+TGG + chr4_4:41391041-41391060 Msa0681250:intron 40.0%
AAAACTGAAGCAGAAAGAGC+AGG + chr4_4:41391125-41391144 Msa0681250:CDS 40.0%
! ATATGTTTGAGACGTCATGG+GGG + chr4_4:41391182-41391201 Msa0681250:intron 40.0%
! AGCTCAACTAGTTTGAGCTA+AGG + chr4_4:41391212-41391231 Msa0681250:intron 40.0%
! GCTCAACTAGTTTGAGCTAA+GGG + chr4_4:41391213-41391232 Msa0681250:intron 40.0%
CTAGTTTGAGCTAAGGGTTA+AGG + chr4_4:41391219-41391238 Msa0681250:intron 40.0%
TGGTAATTACTCCTTCGTTC+GGG - chr4_4:41391267-41391286 None:intergenic 40.0%
ATCAAGTCACAAGTGAGATC+CGG + chr4_4:41391470-41391489 Msa0681250:CDS 40.0%
CTCATCAGATGGAACGAATT+CGG + chr4_4:41391516-41391535 Msa0681250:CDS 40.0%
TTTCAGATCACTTTGCTACC+AGG + chr4_4:41391700-41391719 Msa0681250:three_prime_UTR 40.0%
TTCAGATCACTTTGCTACCA+GGG + chr4_4:41391701-41391720 Msa0681250:three_prime_UTR 40.0%
! GATGGATTTGGATCCTCTTA+TGG + chr4_4:41391946-41391965 Msa0681250:three_prime_UTR 40.0%
GAAGAAGAAACCACCTACTG+AGG + chr4_4:41380334-41380353 Msa0681250:CDS 45.0%
! CTTTTCTCATCCTCAGTAGG+TGG - chr4_4:41380347-41380366 None:intergenic 45.0%
CACCTACTGAGGATGAGAAA+AGG + chr4_4:41380345-41380364 Msa0681250:CDS 45.0%
CTGATCAGCATCTGAAGGAT+GGG - chr4_4:41380432-41380451 None:intergenic 45.0%
CAAACCTGATCAGCATCTGA+AGG - chr4_4:41380437-41380456 None:intergenic 45.0%
AACTTTGGATGGAGTAGTCG+TGG + chr4_4:41380732-41380751 Msa0681250:CDS 45.0%
TACTGGCATTATTGCTCCCT+AGG + chr4_4:41381081-41381100 Msa0681250:intron 45.0%
GTGCGTTTCTTACTTTCCCT+TGG + chr4_4:41381151-41381170 Msa0681250:intron 45.0%
AGTGGAAGTCAGAGTTGTCT+GGG - chr4_4:41381197-41381216 None:intergenic 45.0%
!! ATGCTATTGGGCTTGCTAGA+AGG + chr4_4:41381617-41381636 Msa0681250:CDS 45.0%
ACTGAGGCTTCATCTTGAAC+TGG - chr4_4:41381997-41382016 None:intergenic 45.0%
TCCTCACCATAATGCAACTG+AGG - chr4_4:41382013-41382032 None:intergenic 45.0%
AAACCATCAGGAGCAGAAAC+AGG - chr4_4:41382043-41382062 None:intergenic 45.0%
! TGCTCCTGATGGTTTTCCTA+AGG + chr4_4:41382048-41382067 Msa0681250:CDS 45.0%
GTTCCTTAGTACTGCAGTAC+TGG + chr4_4:41382373-41382392 Msa0681250:intron 45.0%
! ACCATAGCTGGGTTTAGGAT+AGG + chr4_4:41382830-41382849 Msa0681250:intron 45.0%
ACCTATCCTAAACCCAGCTA+TGG - chr4_4:41382834-41382853 None:intergenic 45.0%
TCTGTGTGAGTGGATATCAC+GGG - chr4_4:41382927-41382946 None:intergenic 45.0%
TGGAGTTTCTTCTGTGTGAG+TGG - chr4_4:41382937-41382956 None:intergenic 45.0%
AGTGTAGGTTGTACGTGAAG+GGG + chr4_4:41383432-41383451 Msa0681250:intron 45.0%
! GGTGGAATAACTTGCACTGA+TGG + chr4_4:41383717-41383736 Msa0681250:intron 45.0%
! TAACTTGCACTGATGGTAGC+TGG + chr4_4:41383724-41383743 Msa0681250:intron 45.0%
AATATTTGGCACGCAAGGAG+TGG - chr4_4:41383750-41383769 None:intergenic 45.0%
GCTGAAATATTTGGCACGCA+AGG - chr4_4:41383755-41383774 None:intergenic 45.0%
AGCTTTCTACCCCTTGCATT+TGG + chr4_4:41383926-41383945 Msa0681250:intron 45.0%
GGGTAATCACCAAATGCAAG+GGG - chr4_4:41383938-41383957 None:intergenic 45.0%
CAGGGTAATCACCAAATGCA+AGG - chr4_4:41383940-41383959 None:intergenic 45.0%
ATTACCCTGCTGATACACTC+AGG + chr4_4:41383951-41383970 Msa0681250:intron 45.0%
TGAAATGGGGATCGGAACAA+TGG + chr4_4:41383987-41384006 Msa0681250:CDS 45.0%
GAACAAGCTCCACTTCAAAC+TGG - chr4_4:41384098-41384117 None:intergenic 45.0%
!! AAGGTTTTGGTATTGGGGCT+TGG + chr4_4:41384390-41384409 Msa0681250:intron 45.0%
GGCTTGATGGAAAACCCATT+TGG + chr4_4:41384450-41384469 Msa0681250:intron 45.0%
GTGAATAAGTGGGGAATCCA+GGG + chr4_4:41384628-41384647 Msa0681250:intron 45.0%
TACCAACTGAGCTATGCTCA+CGG + chr4_4:41384685-41384704 Msa0681250:intron 45.0%
! TTTTATAGGGCCTTCGGACA+AGG - chr4_4:41384983-41385002 None:intergenic 45.0%
AAGGTAGGGAACAGGACATT+CGG - chr4_4:41385014-41385033 None:intergenic 45.0%
TTAGAAAGAGTGGTGAAGGG+AGG - chr4_4:41385038-41385057 None:intergenic 45.0%
GAGACAAGAGGAAGACGTAA+AGG + chr4_4:41385214-41385233 Msa0681250:intron 45.0%
GAGGAAGACGTAAAGGTGAT+TGG + chr4_4:41385221-41385240 Msa0681250:intron 45.0%
AAGGTGATTGGGATAGACTC+AGG + chr4_4:41385233-41385252 Msa0681250:intron 45.0%
AGGTGATTGGGATAGACTCA+GGG + chr4_4:41385234-41385253 Msa0681250:intron 45.0%
GAACGAATTGCGGGATCTTT+GGG - chr4_4:41385444-41385463 None:intergenic 45.0%
AATCGCGATTCTGAGTACCA+TGG + chr4_4:41385487-41385506 Msa0681250:intron 45.0%
! CACGAATCCGACGTTTTATC+AGG - chr4_4:41385873-41385892 None:intergenic 45.0%
! GATTCGTGATGGAAAAGGTG+TGG + chr4_4:41385885-41385904 Msa0681250:intron 45.0%
GAAGTAGACTGTCATGAAGG+GGG - chr4_4:41386283-41386302 None:intergenic 45.0%
!! GACACGAGAGTTGATAACGA+TGG + chr4_4:41386353-41386372 Msa0681250:CDS 45.0%
! TGATAACGATGGCCAACCAT+TGG + chr4_4:41386364-41386383 Msa0681250:CDS 45.0%
TGTGTTTGTCTGATGCTACC+TGG + chr4_4:41386618-41386637 Msa0681250:CDS 45.0%
TCCTGTCCAGTCCTGTAATA+GGG - chr4_4:41387333-41387352 None:intergenic 45.0%
TTCCTGTCCAGTCCTGTAAT+AGG - chr4_4:41387334-41387353 None:intergenic 45.0%
ATTACAGGACTGGACAGGAA+TGG + chr4_4:41387334-41387353 Msa0681250:intron 45.0%
! GTAGTCCGTCCCTTTCTTTT+AGG + chr4_4:41387631-41387650 Msa0681250:intron 45.0%
GGGAGAAATTTAGGGAGGAA+AGG - chr4_4:41387879-41387898 None:intergenic 45.0%
! GCAAGGGGTTTTCGGTTTTA+GGG - chr4_4:41387899-41387918 None:intergenic 45.0%
! AGCAAGGGGTTTTCGGTTTT+AGG - chr4_4:41387900-41387919 None:intergenic 45.0%
GTTAGAGAGGGAACGGTAAA+GGG - chr4_4:41387946-41387965 None:intergenic 45.0%
AGTTAGAGAGGGAACGGTAA+AGG - chr4_4:41387947-41387966 None:intergenic 45.0%
TTGTAGGCGTTTCACAACTC+AGG + chr4_4:41388189-41388208 Msa0681250:intron 45.0%
AGCAGTGCGGAATCTAATAG+CGG + chr4_4:41388323-41388342 Msa0681250:intron 45.0%
TAGTAGTCAATCCCGGATAG+CGG - chr4_4:41388589-41388608 None:intergenic 45.0%
!! GTTTTAGGTGCTTCTGCATC+TGG + chr4_4:41388832-41388851 Msa0681250:intron 45.0%
!! CCCATATTTGTTGACTCTCC+AGG + chr4_4:41389004-41389023 Msa0681250:intron 45.0%
GTCCAAATCCAACACCAACT+AGG + chr4_4:41389091-41389110 Msa0681250:intron 45.0%
CCAAATCCAACACCAACTAG+GGG + chr4_4:41389093-41389112 Msa0681250:intron 45.0%
CTGTGTTAGGGAGTAAACTG+CGG + chr4_4:41389269-41389288 Msa0681250:intron 45.0%
CTCCCTTGCCAAAATACTCA+GGG + chr4_4:41389295-41389314 Msa0681250:intron 45.0%
AGTAAGCCAGTCTGTTTGTC+AGG + chr4_4:41389441-41389460 Msa0681250:intron 45.0%
TCGATACCTGACAAACAGAC+TGG - chr4_4:41389450-41389469 None:intergenic 45.0%
TGAGGCACATAAGATGGAAC+AGG - chr4_4:41389632-41389651 None:intergenic 45.0%
! GTAATGGGGTAACTATGGGA+TGG - chr4_4:41389740-41389759 None:intergenic 45.0%
GCACAGAGCTTCTTTCTGAT+AGG + chr4_4:41389845-41389864 Msa0681250:intron 45.0%
AATCCACAAGATGACGAGGA+AGG + chr4_4:41390171-41390190 Msa0681250:CDS 45.0%
CAGATACACGTGTACGTAAC+TGG + chr4_4:41390205-41390224 Msa0681250:intron 45.0%
! TGCTGCCTGCTATCTAAAGT+TGG + chr4_4:41390372-41390391 Msa0681250:CDS 45.0%
! GCTGCCTGCTATCTAAAGTT+GGG + chr4_4:41390373-41390392 Msa0681250:CDS 45.0%
GTTAAGGGTCTTTATCGTCG+TGG + chr4_4:41390913-41390932 Msa0681250:CDS 45.0%
! TATGTTTGAGACGTCATGGG+GGG + chr4_4:41391183-41391202 Msa0681250:intron 45.0%
TGAGCTAAGGGTTAAGGAGT+TGG + chr4_4:41391225-41391244 Msa0681250:intron 45.0%
GTTAAGGAGTTGGAGGTCTT+GGG + chr4_4:41391235-41391254 Msa0681250:intron 45.0%
TTGGGTTAAAACCCGAACGA+AGG + chr4_4:41391253-41391272 Msa0681250:intron 45.0%
ACAAGTGAGATCCGGAAAGA+TGG + chr4_4:41391478-41391497 Msa0681250:CDS 45.0%
ATCAGATGGAACGAATTCGG+AGG + chr4_4:41391519-41391538 Msa0681250:CDS 45.0%
!!! AGGGTTGGTTTGCTCACTTT+TGG + chr4_4:41391575-41391594 Msa0681250:CDS 45.0%
!! TTTGCTCACTTTTGGCCTAC+CGG + chr4_4:41391583-41391602 Msa0681250:CDS 45.0%
! CCTGAACTCTCTAAAAACCC+TGG - chr4_4:41391721-41391740 None:intergenic 45.0%
!! CCAGGGTTTTTAGAGAGTTC+AGG + chr4_4:41391718-41391737 Msa0681250:three_prime_UTR 45.0%
!! CTTATTATTTATTTAATTAA+AGG + chr4_4:41386456-41386475 Msa0681250:intron 5.0%
!!! TTTTTTTATTTTTTTTTATC+AGG + chr4_4:41386814-41386833 Msa0681250:intron 5.0%
!! ATCTTAATAATAAATTTAAA+AGG + chr4_4:41390254-41390273 Msa0681250:intron 5.0%
!! TCTTAATAATAAATTTAAAA+GGG + chr4_4:41390255-41390274 Msa0681250:intron 5.0%
GGAAAATTCTACAGACGGCG+CGG - chr4_4:41380216-41380235 None:intergenic 50.0%
GTAGGTGGTTTCTTCTTCGG+TGG - chr4_4:41380332-41380351 None:intergenic 50.0%
GCTTTGATTAGACCTGGTGG+TGG + chr4_4:41380401-41380420 Msa0681250:CDS 50.0%
CCTGATCAGCATCTGAAGGA+TGG - chr4_4:41380433-41380452 None:intergenic 50.0%
CCATCCTTCAGATGCTGATC+AGG + chr4_4:41380430-41380449 Msa0681250:CDS 50.0%
GAATCTACCCGATCCGAACA+TGG + chr4_4:41380754-41380773 Msa0681250:CDS 50.0%
CATACCTCCATGTTCGGATC+GGG - chr4_4:41380764-41380783 None:intergenic 50.0%
GCATACCTCCATGTTCGGAT+CGG - chr4_4:41380765-41380784 None:intergenic 50.0%
AAGAAACGCACCCTTAGGCA+TGG - chr4_4:41381142-41381161 None:intergenic 50.0%
GAGTGGAAGTCAGAGTTGTC+TGG - chr4_4:41381198-41381217 None:intergenic 50.0%
GTAGCATGAGGAAGTTGGAG+TGG - chr4_4:41381215-41381234 None:intergenic 50.0%
GTTGAAGGGTGAAGTGGCAA+TGG + chr4_4:41381652-41381671 Msa0681250:CDS 50.0%
TAGTGGTTTCCATTGGGGTC+TGG + chr4_4:41381796-41381815 Msa0681250:intron 50.0%
GCCTCAGTTGCATTATGGTG+AGG + chr4_4:41382009-41382028 Msa0681250:CDS 50.0%
!! TGTCCTGTTTCTGCTCCTGA+TGG + chr4_4:41382037-41382056 Msa0681250:CDS 50.0%
TGAGTGGATATCACGGGTTC+AGG - chr4_4:41382921-41382940 None:intergenic 50.0%
GGAGCCTTGGGTTAAAAGGT+TGG - chr4_4:41382957-41382976 None:intergenic 50.0%
AAGGGGAGCCTTGGGTTAAA+AGG - chr4_4:41382961-41382980 None:intergenic 50.0%
GGAAAACAAAGGGGAGCCTT+GGG - chr4_4:41382969-41382988 None:intergenic 50.0%
AGGAAAACAAAGGGGAGCCT+TGG - chr4_4:41382970-41382989 None:intergenic 50.0%
!!! AAGGCTCCCCTTTGTTTTCC+TGG + chr4_4:41382969-41382988 Msa0681250:intron 50.0%
TAGGTTGTACGTGAAGGGGA+GGG + chr4_4:41383436-41383455 Msa0681250:intron 50.0%
GCTGCTTCACATGTGGAATC+AGG - chr4_4:41383814-41383833 None:intergenic 50.0%
GGTACCTGAGTGTATCAGCA+GGG - chr4_4:41383958-41383977 None:intergenic 50.0%
AGGTACCTGAGTGTATCAGC+AGG - chr4_4:41383959-41383978 None:intergenic 50.0%
GGTGAATAAGTGGGGAATCC+AGG + chr4_4:41384627-41384646 Msa0681250:intron 50.0%
ACATTGCAATATGCAGGGGC+TGG - chr4_4:41384662-41384681 None:intergenic 50.0%
GTGAGCATAGCTCAGTTGGT+AGG - chr4_4:41384686-41384705 None:intergenic 50.0%
ACCAACTGAGCTATGCTCAC+GGG + chr4_4:41384686-41384705 Msa0681250:intron 50.0%
CTAGGAGTGGACCGCAATTA+AGG - chr4_4:41384738-41384757 None:intergenic 50.0%
GCAATGAAGGTGACTAGGAG+TGG - chr4_4:41384751-41384770 None:intergenic 50.0%
AGGCTGCAATGAAGGTGACT+AGG - chr4_4:41384756-41384775 None:intergenic 50.0%
! AGTGTTGGAGGCTGCAATGA+AGG - chr4_4:41384764-41384783 None:intergenic 50.0%
ATGCTAACCTCCTTGTCCGA+AGG + chr4_4:41384970-41384989 Msa0681250:intron 50.0%
TGGTGAAGGGAGGAAAGGTA+GGG - chr4_4:41385028-41385047 None:intergenic 50.0%
AAGAGTGGTGAAGGGAGGAA+AGG - chr4_4:41385033-41385052 None:intergenic 50.0%
! CACGAGTAAGGGGCATAAGA+AGG - chr4_4:41385115-41385134 None:intergenic 50.0%
AACACGGACACACGAGTAAG+GGG - chr4_4:41385125-41385144 None:intergenic 50.0%
CAACACGGACACACGAGTAA+GGG - chr4_4:41385126-41385145 None:intergenic 50.0%
ACAACACGGACACACGAGTA+AGG - chr4_4:41385127-41385146 None:intergenic 50.0%
GTGTCCTGTGCTAGACAACA+CGG - chr4_4:41385141-41385160 None:intergenic 50.0%
GAGCGGCAAAACAAAAGAGC+AGG + chr4_4:41385165-41385184 Msa0681250:intron 50.0%
CGAACGAATTGCGGGATCTT+TGG - chr4_4:41385445-41385464 None:intergenic 50.0%
ATGCGAGTCGAACGAATTGC+GGG - chr4_4:41385453-41385472 None:intergenic 50.0%
CATGCGAGTCGAACGAATTG+CGG - chr4_4:41385454-41385473 None:intergenic 50.0%
ATGGGCGCCTGATAAAACGT+CGG + chr4_4:41385863-41385882 Msa0681250:CDS 50.0%
! CGTCGGATTCGTGATGGAAA+AGG + chr4_4:41385880-41385899 Msa0681250:CDS 50.0%
TCATGAAGGGGGCAATCCAT+TGG - chr4_4:41386272-41386291 None:intergenic 50.0%
TCTGATGCTACCTGGAGAGA+TGG + chr4_4:41386626-41386645 Msa0681250:CDS 50.0%
AGGCCTTCAAATGTTCCCGA+GGG + chr4_4:41386834-41386853 Msa0681250:intron 50.0%
CATTGAATATGAGCGCCCTC+GGG - chr4_4:41386852-41386871 None:intergenic 50.0%
CCATTGAATATGAGCGCCCT+CGG - chr4_4:41386853-41386872 None:intergenic 50.0%
!! CGAGGGCGCTCATATTCAAT+GGG + chr4_4:41386851-41386870 Msa0681250:CDS 50.0%
TCCCTATTACAGGACTGGAC+AGG + chr4_4:41387329-41387348 Msa0681250:intron 50.0%
!! CCCCTAGTTGGTGTTGGATT+TGG - chr4_4:41389096-41389115 None:intergenic 50.0%
ATCCAACACCAACTAGGGGA+AGG + chr4_4:41389097-41389116 Msa0681250:intron 50.0%
TAATGGCACACGCCTGTGTT+AGG + chr4_4:41389256-41389275 Msa0681250:intron 50.0%
AATGGCACACGCCTGTGTTA+GGG + chr4_4:41389257-41389276 Msa0681250:intron 50.0%
CGCAGTTTACTCCCTAACAC+AGG - chr4_4:41389271-41389290 None:intergenic 50.0%
GCTCCCTTGCCAAAATACTC+AGG + chr4_4:41389294-41389313 Msa0681250:intron 50.0%
GATAGCAGGCAGCAACATTC+AGG - chr4_4:41390366-41390385 None:intergenic 50.0%
AGCAAATCCTGCGCACGTTA+AGG + chr4_4:41390897-41390916 Msa0681250:CDS 50.0%
GCAAATCCTGCGCACGTTAA+GGG + chr4_4:41390898-41390917 Msa0681250:CDS 50.0%
TAAAGACCCTTAACGTGCGC+AGG - chr4_4:41390907-41390926 None:intergenic 50.0%
GGGTCTTTATCGTCGTGGAA+TGG + chr4_4:41390918-41390937 Msa0681250:CDS 50.0%
GCAGAAAGAGCAGGTGAGAT+TGG + chr4_4:41391134-41391153 Msa0681250:intron 50.0%
GCTAAGGGTTAAGGAGTTGG+AGG + chr4_4:41391228-41391247 Msa0681250:intron 50.0%
GGTTAAGGAGTTGGAGGTCT+TGG + chr4_4:41391234-41391253 Msa0681250:intron 50.0%
AATGCTCAAGACATCACCGC+AGG + chr4_4:41391311-41391330 Msa0681250:intron 50.0%
GGGCTATTTGACAAGAAGCC+TGG + chr4_4:41391412-41391431 Msa0681250:CDS 50.0%
TGAGATCCGGAAAGATGGTG+AGG + chr4_4:41391483-41391502 Msa0681250:CDS 50.0%
TGCACCTGACGCAGATCAAA+AGG + chr4_4:41391555-41391574 Msa0681250:CDS 50.0%
GCACCTGACGCAGATCAAAA+GGG + chr4_4:41391556-41391575 Msa0681250:CDS 50.0%
! CAACCCTTTTGATCTGCGTC+AGG - chr4_4:41391562-41391581 None:intergenic 50.0%
CTGACGCAGATCAAAAGGGT+TGG + chr4_4:41391560-41391579 Msa0681250:CDS 50.0%
GAGAGTTCAGGCATGTTACC+AGG + chr4_4:41391730-41391749 Msa0681250:three_prime_UTR 50.0%
AAATTCTACAGACGGCGCGG+CGG - chr4_4:41380213-41380232 None:intergenic 55.0%
TCTACCCGATCCGAACATGG+AGG + chr4_4:41380757-41380776 Msa0681250:CDS 55.0%
CCATCAAAGCCAGACCCCAA+TGG - chr4_4:41381808-41381827 None:intergenic 55.0%
!! CCATTGGGGTCTGGCTTTGA+TGG + chr4_4:41381805-41381824 Msa0681250:intron 55.0%
GTAGGTTGTACGTGAAGGGG+AGG + chr4_4:41383435-41383454 Msa0681250:intron 55.0%
TTGTACGTGAAGGGGAGGGT+TGG + chr4_4:41383440-41383459 Msa0681250:CDS 55.0%
TGTACGTGAAGGGGAGGGTT+GGG + chr4_4:41383441-41383460 Msa0681250:CDS 55.0%
CCAACTGAGCTATGCTCACG+GGG + chr4_4:41384687-41384706 Msa0681250:intron 55.0%
TATAGGGCCTTCGGACAAGG+AGG - chr4_4:41384980-41384999 None:intergenic 55.0%
AGGGAGGAAAGGTAGGGAAC+AGG - chr4_4:41385022-41385041 None:intergenic 55.0%
GTGGTGAAGGGAGGAAAGGT+AGG - chr4_4:41385029-41385048 None:intergenic 55.0%
GTGTCCGTGTTGTCTAGCAC+AGG + chr4_4:41385134-41385153 Msa0681250:intron 55.0%
TAGCACAGGACACTGCAGAG+CGG + chr4_4:41385148-41385167 Msa0681250:intron 55.0%
TGAGGGACGTGCTTGGAGAT+GGG + chr4_4:41385845-41385864 Msa0681250:CDS 55.0%
GTGACAAGAGCCATCTCTCC+AGG - chr4_4:41386639-41386658 None:intergenic 55.0%
CAGGCCTTCAAATGTTCCCG+AGG + chr4_4:41386833-41386852 Msa0681250:intron 55.0%
!! CCGAGGGCGCTCATATTCAA+TGG + chr4_4:41386850-41386869 Msa0681250:CDS 55.0%
!! GAGGGGCATTGAGCTCTACA+GGG - chr4_4:41388045-41388064 None:intergenic 55.0%
!! AGAGGGGCATTGAGCTCTAC+AGG - chr4_4:41388046-41388065 None:intergenic 55.0%
TAGAGCTCAATGCCCCTCTC+TGG + chr4_4:41388047-41388066 Msa0681250:intron 55.0%
GTAGCGGCAACGAACTGCTA+CGG + chr4_4:41388290-41388309 Msa0681250:intron 55.0%
CGGTAATCGTCGTAGCAGTG+CGG + chr4_4:41388310-41388329 Msa0681250:intron 55.0%
CTCCAGCTGTGCTATAGCAG+CGG + chr4_4:41388349-41388368 Msa0681250:intron 55.0%
!! TATAGCAGCGGAGCGGATTG+CGG + chr4_4:41388361-41388380 Msa0681250:intron 55.0%
CACAGCGGGATAGCATATGG+CGG - chr4_4:41388540-41388559 None:intergenic 55.0%
TGGCACAGCGGGATAGCATA+TGG - chr4_4:41388543-41388562 None:intergenic 55.0%
!! CTATCCCGCTGTGCCACTTT+CGG + chr4_4:41388547-41388566 Msa0681250:intron 55.0%
!! TATCCCGCTGTGCCACTTTC+GGG + chr4_4:41388548-41388567 Msa0681250:intron 55.0%
GACTCTCCAGGTGTTAGTCC+CGG + chr4_4:41389016-41389035 Msa0681250:intron 55.0%
ACTCTCCAGGTGTTAGTCCC+GGG + chr4_4:41389017-41389036 Msa0681250:intron 55.0%
! AGCCTTCCCCTAGTTGGTGT+TGG - chr4_4:41389102-41389121 None:intergenic 55.0%
! AGGCGTGTGCCATTACACCA+CGG - chr4_4:41389251-41389270 None:intergenic 55.0%
TCGTCGTGGAATGGCCTACA+TGG + chr4_4:41390927-41390946 Msa0681250:CDS 55.0%
CGTCGTGGAATGGCCTACAT+GGG + chr4_4:41390928-41390947 Msa0681250:CDS 55.0%
GGAATGGCCTACATGGGCAA+TGG + chr4_4:41390934-41390953 Msa0681250:CDS 55.0%
! TTTGAGACGTCATGGGGGGT+TGG + chr4_4:41391187-41391206 Msa0681250:intron 55.0%
TTGAGACGTCATGGGGGGTT+GGG + chr4_4:41391188-41391207 Msa0681250:intron 55.0%
CCTGCACCTCACCATCTTTC+CGG - chr4_4:41391492-41391511 None:intergenic 55.0%
CGGAAAGATGGTGAGGTGCA+GGG + chr4_4:41391490-41391509 Msa0681250:CDS 55.0%
GTGCAGGGAGACTCATCAGA+TGG + chr4_4:41391505-41391524 Msa0681250:CDS 55.0%
GGATGGGAATCACCACCACC+AGG - chr4_4:41380416-41380435 None:intergenic 60.0%
TGGGGGAGCTGCTTCACATG+TGG - chr4_4:41383821-41383840 None:intergenic 60.0%
CCCCGTGAGCATAGCTCAGT+TGG - chr4_4:41384690-41384709 None:intergenic 60.0%
CAACAGGTGAGGGACGTGCT+TGG + chr4_4:41385838-41385857 Msa0681250:intron 60.0%
GTGAGGGACGTGCTTGGAGA+TGG + chr4_4:41385844-41385863 Msa0681250:CDS 60.0%
GCGCCCTCGGGAACATTTGA+AGG - chr4_4:41386840-41386859 None:intergenic 60.0%
AGTTCGTTGCCGCTACGCCA+CGG - chr4_4:41388286-41388305 None:intergenic 60.0%
CTCCGCTGCTATAGCACAGC+TGG - chr4_4:41388354-41388373 None:intergenic 60.0%
GCTGTGCTATAGCAGCGGAG+CGG + chr4_4:41388354-41388373 Msa0681250:intron 60.0%
!! ATCCCGCTGTGCCACTTTCG+GGG + chr4_4:41388549-41388568 Msa0681250:intron 60.0%
TGACCCCGAAAGTGGCACAG+CGG - chr4_4:41388555-41388574 None:intergenic 60.0%
ATAGCGGCTGACCCCGAAAG+TGG - chr4_4:41388563-41388582 None:intergenic 60.0%
AGCCGCTATGCACCGCTATC+CGG + chr4_4:41388574-41388593 Msa0681250:intron 60.0%
! TCCCGGATAGCGGTGCATAG+CGG - chr4_4:41388579-41388598 None:intergenic 60.0%
CCGGAAAGATGGTGAGGTGC+AGG + chr4_4:41391489-41391508 Msa0681250:CDS 60.0%
AGGGGCTGGAGTTCGAACCC+TGG - chr4_4:41384648-41384667 None:intergenic 65.0%
GTTCGTTGCCGCTACGCCAC+GGG - chr4_4:41388285-41388304 None:intergenic 65.0%
GACCCCGAAAGTGGCACAGC+GGG - chr4_4:41388554-41388573 None:intergenic 65.0%
GCCGCTATGCACCGCTATCC+GGG + chr4_4:41388575-41388594 Msa0681250:intron 65.0%
AGGTGTTAGTCCCGGGCGTG+CGG + chr4_4:41389024-41389043 Msa0681250:intron 65.0%
TAGCCCAATACCCGCACGCC+CGG - chr4_4:41389038-41389057 None:intergenic 65.0%
GGCGCTATAGCGTCTGCCCG+TGG + chr4_4:41388266-41388285 Msa0681250:intron 70.0%
AGCGTCTGCCCGTGGCGTAG+CGG + chr4_4:41388274-41388293 Msa0681250:intron 70.0%
GCACGCCCGGGACTAACACC+TGG - chr4_4:41389025-41389044 None:intergenic 70.0%
GGTGTTAGTCCCGGGCGTGC+GGG + chr4_4:41389025-41389044 Msa0681250:intron 70.0%
AGTCCCGGGCGTGCGGGTAT+TGG + chr4_4:41389031-41389050 Msa0681250:intron 70.0%
GTCCCGGGCGTGCGGGTATT+GGG + chr4_4:41389032-41389051 Msa0681250:intron 70.0%
AGCCCAATACCCGCACGCCC+GGG - chr4_4:41389037-41389056 None:intergenic 70.0%
ACAGACGGCGCGGCGGTGTG+TGG - chr4_4:41380206-41380225 None:intergenic 75.0%
! GACGGCGCGGCGGTGTGTGG+AGG - chr4_4:41380203-41380222 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 41380195 41392026 41380195 ID=Msa0681250;Name=Msa0681250
chr4_4 mRNA 41380195 41392026 41380195 ID=Msa0681250-mRNA-1;Parent=Msa0681250;Name=Msa0681250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=92|1|1|1|0.94|1|19|372|625
chr4_4 exon 41380195 41380451 41380195 ID=Msa0681250-mRNA-1:exon:9851;Parent=Msa0681250-mRNA-1
chr4_4 exon 41380709 41380778 41380709 ID=Msa0681250-mRNA-1:exon:9852;Parent=Msa0681250-mRNA-1
chr4_4 exon 41381576 41381673 41381576 ID=Msa0681250-mRNA-1:exon:9853;Parent=Msa0681250-mRNA-1
chr4_4 exon 41381998 41382120 41381998 ID=Msa0681250-mRNA-1:exon:9854;Parent=Msa0681250-mRNA-1
chr4_4 exon 41382500 41382532 41382500 ID=Msa0681250-mRNA-1:exon:9855;Parent=Msa0681250-mRNA-1
chr4_4 exon 41383439 41383497 41383439 ID=Msa0681250-mRNA-1:exon:9856;Parent=Msa0681250-mRNA-1
chr4_4 exon 41383587 41383671 41383587 ID=Msa0681250-mRNA-1:exon:9857;Parent=Msa0681250-mRNA-1
chr4_4 exon 41383973 41384128 41383973 ID=Msa0681250-mRNA-1:exon:9858;Parent=Msa0681250-mRNA-1
chr4_4 exon 41385844 41385901 41385844 ID=Msa0681250-mRNA-1:exon:9859;Parent=Msa0681250-mRNA-1
chr4_4 exon 41386261 41386409 41386261 ID=Msa0681250-mRNA-1:exon:9860;Parent=Msa0681250-mRNA-1
chr4_4 exon 41386597 41386694 41386597 ID=Msa0681250-mRNA-1:exon:9861;Parent=Msa0681250-mRNA-1
chr4_4 exon 41386836 41386905 41386836 ID=Msa0681250-mRNA-1:exon:9862;Parent=Msa0681250-mRNA-1
chr4_4 exon 41387341 41387400 41387341 ID=Msa0681250-mRNA-1:exon:9863;Parent=Msa0681250-mRNA-1
chr4_4 exon 41388681 41388737 41388681 ID=Msa0681250-mRNA-1:exon:9864;Parent=Msa0681250-mRNA-1
chr4_4 exon 41390147 41390215 41390147 ID=Msa0681250-mRNA-1:exon:9865;Parent=Msa0681250-mRNA-1
chr4_4 exon 41390352 41390429 41390352 ID=Msa0681250-mRNA-1:exon:9866;Parent=Msa0681250-mRNA-1
chr4_4 exon 41390889 41390990 41390889 ID=Msa0681250-mRNA-1:exon:9867;Parent=Msa0681250-mRNA-1
chr4_4 exon 41391075 41391146 41391075 ID=Msa0681250-mRNA-1:exon:9868;Parent=Msa0681250-mRNA-1
chr4_4 exon 41391379 41392026 41391379 ID=Msa0681250-mRNA-1:exon:9869;Parent=Msa0681250-mRNA-1
chr4_4 five_prime_UTR 41380195 41380286 41380195 ID=Msa0681250-mRNA-1:five_prime_utr;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41380287 41380451 41380287 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41380709 41380778 41380709 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41381576 41381673 41381576 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41381998 41382120 41381998 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41382500 41382532 41382500 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41383439 41383497 41383439 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41383587 41383671 41383587 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41383973 41384128 41383973 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41385844 41385901 41385844 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41386261 41386409 41386261 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41386597 41386694 41386597 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41386836 41386905 41386836 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41387341 41387400 41387341 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41388681 41388737 41388681 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41390147 41390215 41390147 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41390352 41390429 41390352 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41390889 41390990 41390889 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41391075 41391146 41391075 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 CDS 41391379 41391654 41391379 ID=Msa0681250-mRNA-1:cds;Parent=Msa0681250-mRNA-1
chr4_4 three_prime_UTR 41391655 41392026 41391655 ID=Msa0681250-mRNA-1:three_prime_utr;Parent=Msa0681250-mRNA-1
Gene Sequence

>Msa0681250

ATGGCTATTGTAAATGAAGAAGATGTTCAACAAGAATTTAATCCACCGAAGAAGAAACCACCTACTGAGGATGAGAAAAGGAAGAAGAAAATTGTAGCTGGGAGTTTGATGAAAGCTTTGATTAGACCTGGTGGTGGTGATTCCCATCCTTCAGATGCTGATCAGGTTATCTATCACTCCACAATTCGAACTTTGGATGGAGTAGTCGTGGAATCTACCCGATCCGAACATGGAGGCAAGGGAACACCAATAAGACATGTATTGGGTAAAAGCAAGATGCTATTGGGCTTGCTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCTGTTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTCCATTTTGAAATTGAACTGATAGAGTTTTTCAAGGCCAAGGTTATCACTGATGATTTGGAAGTGGTTAAAAAGGTTGTACGTGAAGGGGAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCAAAGACAGTTACTGGAAAATTGATCATGTCACACACAGAAGGAGAACCATACTTCTTCACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATCGGAACAATGGTTCGAGAAGAAAAAGCTGTTATATATGTTACAAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGCTTGTTCACTTTATTCAAGTGAGGGACGTGCTTGGAGATGGGCGCCTGATAAAACGTCGGATTCGTGATGGAAAAGGTGATTTTCCAATGGATTGCCCCCTTCATGACAGTCTACTTCATGTTCATTACAAGGGTACTGTTCTCAATGAAGAAAATAGGGTTTTCTATGACACGAGAGTTGATAACGATGGCCAACCATTGGATTTCTGTTCTGGAGAAGGACTCGTACCAGAGGGATTTGAATTGTGTGTTTGTCTGATGCTACCTGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTTCCCGAGGGCGCTCATATTCAATGGGAAATTGAGCTTCTATCTTTTGAAATGCCAAAGGACTGGACAGGAATGGACTTTAAAAGTATAATGAACGAAGCTGAAAATATCAGAAACACGGGTAACAGGTTGTTCAAAGAAGGAAAATATGAACTTGCAAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAGGAAGGAAAAGTATTTTCAGATACACGTAATTTGCTACACCTGAATGTTGCTGCCTGCTATCTAAAGTTGGGAGAATGCAGAAAGTCCATTGAGACCTGTAATAAGGTTTTAGAAGCAAATCCTGCGCACGTTAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGGCAATGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATCAAAGTCGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCTAAAACTGAAGCAGAAAGAGCAGGAAGTTGAGAAGAAAGCTCGAAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGTTAAAGCTAACGACGATGAAAATCAAGTCACAAGTGAGATCCGGAAAGATGGTGAGGTGCAGGGAGACTCATCAGATGGAACGAATTCGGAGGATTCACATGAAGCTGCACCTGACGCAGATCAAAAGGGTTGGTTTGCTCACTTTTGGCCTACCGGTAGTAGAATTTTTTCATCTCTTGGGCTTCATAGATGTACCATACTATAA
Protein sequence

>Msa0681250

MAIVNEEDVQQEFNPPKKKPPTEDEKRKKKIVAGSLMKALIRPGGGDSHPSDADQVIYHSTIRTLDGVVVESTRSEHGGKGTPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPVSAPDGFPKDDELHFEIELIEFFKAKVITDDLEVVKKVVREGEGWESPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVELVHFIQVRDVLGDGRLIKRRIRDGKGDFPMDCPLHDSLLHVHYKGTVLNEENRVFYDTRVDNDGQPLDFCSGEGLVPEGFELCVCLMLPGEMALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFEMPKDWTGMDFKSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFSDTRNLLHLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMGNGDFEEARADFKMMIKVDKSTESDATAALLKLKQKEQEVEKKARKQFKGLFDKKPGEIAEVKANDDENQVTSEIRKDGEVQGDSSDGTNSEDSHEAAPDADQKGWFAHFWPTGSRIFSSLGLHRCTIL*