Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518890 | KEH35672.1 | 92.638 | 163 | 12 | 0 | 1 | 163 | 39 | 201 | 5.30e-105 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518890 | sp|Q5R833|ACO13_PONAB | 39.655 | 116 | 69 | 1 | 42 | 157 | 24 | 138 | 3.66e-20 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518890 | A0A072V1F3 | 92.638 | 163 | 12 | 0 | 1 | 163 | 39 | 201 | 2.53e-105 | 308 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0518890 | Msa0741440 | 0.810363 | 1.196333e-50 | -8.615850e-47 |
| Msa0518890 | Msa0822500 | 0.808216 | 3.454413e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518890 | MtrunA17_Chr3g0131211 | 92.638 | 163 | 12 | 0 | 1 | 163 | 1 | 163 | 9.09e-109 | 306 |
| Msa0518890 | MtrunA17_Chr3g0131241 | 71.698 | 159 | 42 | 1 | 1 | 159 | 1 | 156 | 3.78e-82 | 239 |
| Msa0518890 | MtrunA17_Chr3g0131251 | 69.325 | 163 | 47 | 1 | 1 | 163 | 1 | 160 | 2.42e-78 | 229 |
| Msa0518890 | MtrunA17_Chr3g0131201 | 65.031 | 163 | 48 | 3 | 1 | 163 | 43 | 196 | 3.41e-68 | 205 |
| Msa0518890 | MtrunA17_Chr3g0131231 | 65.278 | 144 | 33 | 2 | 20 | 163 | 9 | 135 | 1.65e-65 | 196 |
| Msa0518890 | MtrunA17_Chr3g0131191 | 61.290 | 155 | 58 | 2 | 10 | 163 | 2 | 155 | 8.04e-63 | 190 |
| Msa0518890 | MtrunA17_Chr3g0131261 | 63.551 | 107 | 39 | 0 | 9 | 115 | 4 | 110 | 8.63e-47 | 149 |
| Msa0518890 | MtrunA17_Chr3g0131221 | 48.077 | 104 | 44 | 2 | 60 | 163 | 1 | 94 | 5.52e-21 | 82.0 |
| Msa0518890 | MtrunA17_Chr5g0429471 | 39.062 | 128 | 74 | 3 | 37 | 163 | 37 | 161 | 7.53e-20 | 80.9 |
| Msa0518890 | MtrunA17_Chr8g0350041 | 27.559 | 127 | 92 | 0 | 37 | 163 | 61 | 187 | 8.48e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518890 | AT1G04290.1 | 65.333 | 150 | 48 | 3 | 10 | 157 | 2 | 149 | 8.00e-61 | 185 |
| Msa0518890 | AT1G04290.2 | 62.385 | 109 | 37 | 3 | 10 | 116 | 2 | 108 | 3.98e-36 | 122 |
| Msa0518890 | AT2G29590.1 | 35.758 | 165 | 86 | 7 | 11 | 163 | 2 | 158 | 3.75e-17 | 74.3 |
Find 34 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATGGAGTTCAGGAGTTT+CGG | 0.344275 | 3_4:-70756852 | Msa0518890:CDS |
| CATCACTACTTTGGTGGATC+TGG | 0.357320 | 3_4:-70756906 | Msa0518890:CDS |
| CTGTTATAAGCGTGGAGTTA+AGG | 0.385303 | 3_4:-70756466 | Msa0518890:CDS |
| AGGAGAAGAATCAGCATCAA+TGG | 0.446669 | 3_4:-70757156 | Msa0518890:CDS |
| AAGAGGTACTTGGAGAAGAA+AGG | 0.461866 | 3_4:-70757176 | Msa0518890:CDS |
| ACTGATAAAGGGAATATACT+TGG | 0.473510 | 3_4:+70756403 | None:intergenic |
| AGAATCAGTGAAGAGGTACT+TGG | 0.475261 | 3_4:-70757186 | Msa0518890:CDS |
| CGAGATCAATGTCTCATGCT+TGG | 0.500260 | 3_4:-70756828 | Msa0518890:CDS |
| ATTGAGAAAACGATGCGGCC+AGG | 0.510535 | 3_4:+70757062 | None:intergenic |
| TGGTGCCATCACTACTTTGG+TGG | 0.522618 | 3_4:-70756912 | Msa0518890:CDS |
| GCAATGGCAGTTCCCACTGC+GGG | 0.542837 | 3_4:-70756878 | Msa0518890:CDS |
| CGGTGGTGCCATCACTACTT+TGG | 0.548373 | 3_4:-70756915 | Msa0518890:CDS |
| GGTAGACGATGAATTGCCTC+GGG | 0.567000 | 3_4:-70757135 | Msa0518890:CDS |
| TGGTAGACGATGAATTGCCT+CGG | 0.567173 | 3_4:-70757136 | Msa0518890:CDS |
| GGCCAGGTTGTATGAGATCA+AGG | 0.567753 | 3_4:+70757078 | None:intergenic |
| CACCTTGATCTCATACAACC+TGG | 0.575066 | 3_4:-70757080 | Msa0518890:CDS |
| GGTGGATCTGGTAGGCGCAA+TGG | 0.579055 | 3_4:-70756894 | Msa0518890:CDS |
| GACTATAGCTGTTATAAGCG+TGG | 0.583205 | 3_4:-70756474 | Msa0518890:CDS |
| TTGGGACATCTAGTCGTAGG+TGG | 0.586154 | 3_4:-70757107 | Msa0518890:CDS |
| AAGATACGAACGAGTAAATG+TGG | 0.592245 | 3_4:+70757029 | None:intergenic |
| CTATGGTGAAAACAGAAGAA+AGG | 0.596425 | 3_4:-70757220 | Msa0518890:CDS |
| CAGATCCACCAAAGTAGTGA+TGG | 0.597903 | 3_4:+70756907 | None:intergenic |
| CTCCATGAAAATCCCGCAGT+GGG | 0.600089 | 3_4:+70756866 | None:intergenic |
| ACTACTTTGGTGGATCTGGT+AGG | 0.605004 | 3_4:-70756902 | Msa0518890:CDS |
| GAAAACAGAAGAAAGGATGA+CGG | 0.627478 | 3_4:-70757213 | Msa0518890:CDS |
| CGGATTTAGAATCAGTGAAG+AGG | 0.636860 | 3_4:-70757193 | Msa0518890:CDS |
| TAGGAGGAGATTGAGATCGA+TGG | 0.637595 | 3_4:-70756518 | Msa0518890:CDS |
| AATTCAAGTAACTACTTACA+CGG | 0.637870 | 3_4:-70756935 | Msa0518890:CDS |
| GATGGCAGAGTTCTACGAGT+AGG | 0.654230 | 3_4:-70756500 | Msa0518890:CDS |
| CGCAATGGCAGTTCCCACTG+CGG | 0.659015 | 3_4:-70756879 | Msa0518890:CDS |
| ACTCCATGAAAATCCCGCAG+TGG | 0.688697 | 3_4:+70756865 | None:intergenic |
| ATACGAACGAGTAAATGTGG+AGG | 0.729121 | 3_4:+70757032 | None:intergenic |
| TCTTCATTGAGAAAACGATG+CGG | 0.782337 | 3_4:+70757057 | None:intergenic |
| TCAAGTAACTACTTACACGG+TGG | 0.786690 | 3_4:-70756932 | Msa0518890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTAAAATTCTCTA+TGG | - | chr3_4:70757059-70757078 | Msa0518890:CDS | 10.0% |
| !!! | TTATTTTTTAAAATTCTCTA+TGG | - | chr3_4:70757059-70757078 | Msa0518890:CDS | 10.0% |
| !! | ATCCATTAATGTTATTATTA+GGG | + | chr3_4:70756632-70756651 | None:intergenic | 15.0% |
| !! | AATCCATTAATGTTATTATT+AGG | + | chr3_4:70756633-70756652 | None:intergenic | 15.0% |
| !! | ATCCATTAATGTTATTATTA+GGG | + | chr3_4:70756632-70756651 | None:intergenic | 15.0% |
| !! | AATCCATTAATGTTATTATT+AGG | + | chr3_4:70756633-70756652 | None:intergenic | 15.0% |
| !! | TTCCCTAATAATAACATTAA+TGG | - | chr3_4:70756627-70756646 | Msa0518890:intron | 20.0% |
| !!! | TTCTTTTCTTGGTAAAATAT+TGG | - | chr3_4:70757007-70757026 | Msa0518890:intron | 20.0% |
| !! | TTCCCTAATAATAACATTAA+TGG | - | chr3_4:70756627-70756646 | Msa0518890:intron | 20.0% |
| !!! | TTCTTTTCTTGGTAAAATAT+TGG | - | chr3_4:70757007-70757026 | Msa0518890:intron | 20.0% |
| ! | AATTCAAGTAACTACTTACA+CGG | - | chr3_4:70756677-70756696 | Msa0518890:intron | 25.0% |
| !!! | TTGTGTTGGTTAATCAATTA+TGG | + | chr3_4:70756941-70756960 | None:intergenic | 25.0% |
| ! | TTCCTCAAATTATGTAGTAT+CGG | + | chr3_4:70756980-70756999 | None:intergenic | 25.0% |
| ! | AATTCAAGTAACTACTTACA+CGG | - | chr3_4:70756677-70756696 | Msa0518890:intron | 25.0% |
| !!! | TTGTGTTGGTTAATCAATTA+TGG | + | chr3_4:70756941-70756960 | None:intergenic | 25.0% |
| ! | TTCCTCAAATTATGTAGTAT+CGG | + | chr3_4:70756980-70756999 | None:intergenic | 25.0% |
| !! | TTGGTTTGTTACTAAGTGTT+GGG | + | chr3_4:70756915-70756934 | None:intergenic | 30.0% |
| !! | ATTGGTTTGTTACTAAGTGT+TGG | + | chr3_4:70756916-70756935 | None:intergenic | 30.0% |
| GGTTAATCAATTATGGTCAT+TGG | + | chr3_4:70756934-70756953 | None:intergenic | 30.0% | |
| ATCACTCATTTACTTTGTGT+TGG | + | chr3_4:70756955-70756974 | None:intergenic | 30.0% | |
| ATCCGATACTACATAATTTG+AGG | - | chr3_4:70756975-70756994 | Msa0518890:intron | 30.0% | |
| ! | GGAATATGAGATTCTTTTCT+TGG | - | chr3_4:70756996-70757015 | Msa0518890:intron | 30.0% |
| GAGTTAAGGAAGAAAAAAAC+TGG | - | chr3_4:70757160-70757179 | Msa0518890:CDS | 30.0% | |
| ACTGATAAAGGGAATATACT+TGG | + | chr3_4:70757212-70757231 | None:intergenic | 30.0% | |
| !! | TTGGTTTGTTACTAAGTGTT+GGG | + | chr3_4:70756915-70756934 | None:intergenic | 30.0% |
| !! | ATTGGTTTGTTACTAAGTGT+TGG | + | chr3_4:70756916-70756935 | None:intergenic | 30.0% |
| GGTTAATCAATTATGGTCAT+TGG | + | chr3_4:70756934-70756953 | None:intergenic | 30.0% | |
| ATCACTCATTTACTTTGTGT+TGG | + | chr3_4:70756955-70756974 | None:intergenic | 30.0% | |
| ATCCGATACTACATAATTTG+AGG | - | chr3_4:70756975-70756994 | Msa0518890:intron | 30.0% | |
| ! | GGAATATGAGATTCTTTTCT+TGG | - | chr3_4:70756996-70757015 | Msa0518890:intron | 30.0% |
| GAGTTAAGGAAGAAAAAAAC+TGG | - | chr3_4:70757160-70757179 | Msa0518890:CDS | 30.0% | |
| ACTGATAAAGGGAATATACT+TGG | + | chr3_4:70757212-70757231 | None:intergenic | 30.0% | |
| GAAAACAGAAGAAAGGATGA+CGG | - | chr3_4:70756399-70756418 | Msa0518890:CDS | 35.0% | |
| TCTTCATTGAGAAAACGATG+CGG | + | chr3_4:70756558-70756577 | None:intergenic | 35.0% | |
| AAGATACGAACGAGTAAATG+TGG | + | chr3_4:70756586-70756605 | None:intergenic | 35.0% | |
| TCTATGGCTTATGTGATGAT+AGG | - | chr3_4:70757075-70757094 | Msa0518890:CDS | 35.0% | |
| GAAAACAGAAGAAAGGATGA+CGG | - | chr3_4:70756399-70756418 | Msa0518890:CDS | 35.0% | |
| TCTTCATTGAGAAAACGATG+CGG | + | chr3_4:70756558-70756577 | None:intergenic | 35.0% | |
| AAGATACGAACGAGTAAATG+TGG | + | chr3_4:70756586-70756605 | None:intergenic | 35.0% | |
| TCTATGGCTTATGTGATGAT+AGG | - | chr3_4:70757075-70757094 | Msa0518890:CDS | 35.0% | |
| ! | CGGATTTAGAATCAGTGAAG+AGG | - | chr3_4:70756419-70756438 | Msa0518890:CDS | 40.0% |
| !! | AGAATCAGTGAAGAGGTACT+TGG | - | chr3_4:70756426-70756445 | Msa0518890:CDS | 40.0% |
| !! | AAGAGGTACTTGGAGAAGAA+AGG | - | chr3_4:70756436-70756455 | Msa0518890:CDS | 40.0% |
| AGGAGAAGAATCAGCATCAA+TGG | - | chr3_4:70756456-70756475 | Msa0518890:CDS | 40.0% | |
| !!! | TTTTTGGGACATCTAGTCGT+AGG | - | chr3_4:70756502-70756521 | Msa0518890:CDS | 40.0% |
| ATACGAACGAGTAAATGTGG+AGG | + | chr3_4:70756583-70756602 | None:intergenic | 40.0% | |
| TCAAGTAACTACTTACACGG+TGG | - | chr3_4:70756680-70756699 | Msa0518890:intron | 40.0% | |
| TTCATGGAGTTCAGGAGTTT+CGG | - | chr3_4:70756760-70756779 | Msa0518890:intron | 40.0% | |
| ATGGCTTATGTGATGATAGG+AGG | - | chr3_4:70757078-70757097 | Msa0518890:CDS | 40.0% | |
| GACTATAGCTGTTATAAGCG+TGG | - | chr3_4:70757138-70757157 | Msa0518890:CDS | 40.0% | |
| CTGTTATAAGCGTGGAGTTA+AGG | - | chr3_4:70757146-70757165 | Msa0518890:CDS | 40.0% | |
| ! | AACTGGCCAAATTTTTGCTC+AGG | - | chr3_4:70757177-70757196 | Msa0518890:CDS | 40.0% |
| ! | ACTGGCCAAATTTTTGCTCA+GGG | - | chr3_4:70757178-70757197 | Msa0518890:CDS | 40.0% |
| ! | CGGATTTAGAATCAGTGAAG+AGG | - | chr3_4:70756419-70756438 | Msa0518890:CDS | 40.0% |
| !! | AGAATCAGTGAAGAGGTACT+TGG | - | chr3_4:70756426-70756445 | Msa0518890:CDS | 40.0% |
| !! | AAGAGGTACTTGGAGAAGAA+AGG | - | chr3_4:70756436-70756455 | Msa0518890:CDS | 40.0% |
| AGGAGAAGAATCAGCATCAA+TGG | - | chr3_4:70756456-70756475 | Msa0518890:CDS | 40.0% | |
| !!! | TTTTTGGGACATCTAGTCGT+AGG | - | chr3_4:70756502-70756521 | Msa0518890:CDS | 40.0% |
| ATACGAACGAGTAAATGTGG+AGG | + | chr3_4:70756583-70756602 | None:intergenic | 40.0% | |
| TCAAGTAACTACTTACACGG+TGG | - | chr3_4:70756680-70756699 | Msa0518890:intron | 40.0% | |
| TTCATGGAGTTCAGGAGTTT+CGG | - | chr3_4:70756760-70756779 | Msa0518890:intron | 40.0% | |
| ATGGCTTATGTGATGATAGG+AGG | - | chr3_4:70757078-70757097 | Msa0518890:CDS | 40.0% | |
| GACTATAGCTGTTATAAGCG+TGG | - | chr3_4:70757138-70757157 | Msa0518890:CDS | 40.0% | |
| CTGTTATAAGCGTGGAGTTA+AGG | - | chr3_4:70757146-70757165 | Msa0518890:CDS | 40.0% | |
| ! | AACTGGCCAAATTTTTGCTC+AGG | - | chr3_4:70757177-70757196 | Msa0518890:CDS | 40.0% |
| ! | ACTGGCCAAATTTTTGCTCA+GGG | - | chr3_4:70757178-70757197 | Msa0518890:CDS | 40.0% |
| TGGTAGACGATGAATTGCCT+CGG | - | chr3_4:70756476-70756495 | Msa0518890:CDS | 45.0% | |
| ! | TGAATTGCCTCGGGAGTTTT+TGG | - | chr3_4:70756486-70756505 | Msa0518890:CDS | 45.0% |
| ! | GAATTGCCTCGGGAGTTTTT+GGG | - | chr3_4:70756487-70756506 | Msa0518890:CDS | 45.0% |
| CACCTTGATCTCATACAACC+TGG | - | chr3_4:70756532-70756551 | Msa0518890:intron | 45.0% | |
| CAGATCCACCAAAGTAGTGA+TGG | + | chr3_4:70756708-70756727 | None:intergenic | 45.0% | |
| ! | CATCACTACTTTGGTGGATC+TGG | - | chr3_4:70756706-70756725 | Msa0518890:intron | 45.0% |
| ! | ACTACTTTGGTGGATCTGGT+AGG | - | chr3_4:70756710-70756729 | Msa0518890:intron | 45.0% |
| CGAGATCAATGTCTCATGCT+TGG | - | chr3_4:70756784-70756803 | Msa0518890:intron | 45.0% | |
| TAGGAGGAGATTGAGATCGA+TGG | - | chr3_4:70757094-70757113 | Msa0518890:CDS | 45.0% | |
| ! | CTGGCCAAATTTTTGCTCAG+GGG | - | chr3_4:70757179-70757198 | Msa0518890:CDS | 45.0% |
| TGGTAGACGATGAATTGCCT+CGG | - | chr3_4:70756476-70756495 | Msa0518890:CDS | 45.0% | |
| ! | TGAATTGCCTCGGGAGTTTT+TGG | - | chr3_4:70756486-70756505 | Msa0518890:CDS | 45.0% |
| ! | GAATTGCCTCGGGAGTTTTT+GGG | - | chr3_4:70756487-70756506 | Msa0518890:CDS | 45.0% |
| CACCTTGATCTCATACAACC+TGG | - | chr3_4:70756532-70756551 | Msa0518890:intron | 45.0% | |
| CAGATCCACCAAAGTAGTGA+TGG | + | chr3_4:70756708-70756727 | None:intergenic | 45.0% | |
| ! | CATCACTACTTTGGTGGATC+TGG | - | chr3_4:70756706-70756725 | Msa0518890:intron | 45.0% |
| ! | ACTACTTTGGTGGATCTGGT+AGG | - | chr3_4:70756710-70756729 | Msa0518890:intron | 45.0% |
| CGAGATCAATGTCTCATGCT+TGG | - | chr3_4:70756784-70756803 | Msa0518890:intron | 45.0% | |
| TAGGAGGAGATTGAGATCGA+TGG | - | chr3_4:70757094-70757113 | Msa0518890:CDS | 45.0% | |
| ! | CTGGCCAAATTTTTGCTCAG+GGG | - | chr3_4:70757179-70757198 | Msa0518890:CDS | 45.0% |
| GGTAGACGATGAATTGCCTC+GGG | - | chr3_4:70756477-70756496 | Msa0518890:CDS | 50.0% | |
| AGATGTCCCAAAAACTCCCG+AGG | + | chr3_4:70756496-70756515 | None:intergenic | 50.0% | |
| TTGGGACATCTAGTCGTAGG+TGG | - | chr3_4:70756505-70756524 | Msa0518890:CDS | 50.0% | |
| GGCCAGGTTGTATGAGATCA+AGG | + | chr3_4:70756537-70756556 | None:intergenic | 50.0% | |
| ATTGAGAAAACGATGCGGCC+AGG | + | chr3_4:70756553-70756572 | None:intergenic | 50.0% | |
| !! | TGGTGCCATCACTACTTTGG+TGG | - | chr3_4:70756700-70756719 | Msa0518890:intron | 50.0% |
| ! | TTCCCACTGCGGGATTTTCA+TGG | - | chr3_4:70756744-70756763 | Msa0518890:intron | 50.0% |
| CTCCATGAAAATCCCGCAGT+GGG | + | chr3_4:70756749-70756768 | None:intergenic | 50.0% | |
| ACTCCATGAAAATCCCGCAG+TGG | + | chr3_4:70756750-70756769 | None:intergenic | 50.0% | |
| ! | GCGGGATTTTCATGGAGTTC+AGG | - | chr3_4:70756752-70756771 | Msa0518890:intron | 50.0% |
| GATGGCAGAGTTCTACGAGT+AGG | - | chr3_4:70757112-70757131 | Msa0518890:CDS | 50.0% | |
| GACGCCCCTGAGCAAAAATT+TGG | + | chr3_4:70757186-70757205 | None:intergenic | 50.0% | |
| GGTAGACGATGAATTGCCTC+GGG | - | chr3_4:70756477-70756496 | Msa0518890:CDS | 50.0% | |
| AGATGTCCCAAAAACTCCCG+AGG | + | chr3_4:70756496-70756515 | None:intergenic | 50.0% | |
| TTGGGACATCTAGTCGTAGG+TGG | - | chr3_4:70756505-70756524 | Msa0518890:CDS | 50.0% | |
| GGCCAGGTTGTATGAGATCA+AGG | + | chr3_4:70756537-70756556 | None:intergenic | 50.0% | |
| ATTGAGAAAACGATGCGGCC+AGG | + | chr3_4:70756553-70756572 | None:intergenic | 50.0% | |
| !! | TGGTGCCATCACTACTTTGG+TGG | - | chr3_4:70756700-70756719 | Msa0518890:intron | 50.0% |
| ! | TTCCCACTGCGGGATTTTCA+TGG | - | chr3_4:70756744-70756763 | Msa0518890:intron | 50.0% |
| CTCCATGAAAATCCCGCAGT+GGG | + | chr3_4:70756749-70756768 | None:intergenic | 50.0% | |
| ACTCCATGAAAATCCCGCAG+TGG | + | chr3_4:70756750-70756769 | None:intergenic | 50.0% | |
| ! | GCGGGATTTTCATGGAGTTC+AGG | - | chr3_4:70756752-70756771 | Msa0518890:intron | 50.0% |
| GATGGCAGAGTTCTACGAGT+AGG | - | chr3_4:70757112-70757131 | Msa0518890:CDS | 50.0% | |
| GACGCCCCTGAGCAAAAATT+TGG | + | chr3_4:70757186-70757205 | None:intergenic | 50.0% | |
| !! | CGGTGGTGCCATCACTACTT+TGG | - | chr3_4:70756697-70756716 | Msa0518890:intron | 55.0% |
| !! | CGGTGGTGCCATCACTACTT+TGG | - | chr3_4:70756697-70756716 | Msa0518890:intron | 55.0% |
| GGTGGATCTGGTAGGCGCAA+TGG | - | chr3_4:70756718-70756737 | Msa0518890:intron | 60.0% | |
| CGCAATGGCAGTTCCCACTG+CGG | - | chr3_4:70756733-70756752 | Msa0518890:intron | 60.0% | |
| GCAATGGCAGTTCCCACTGC+GGG | - | chr3_4:70756734-70756753 | Msa0518890:intron | 60.0% | |
| GGTGGATCTGGTAGGCGCAA+TGG | - | chr3_4:70756718-70756737 | Msa0518890:intron | 60.0% | |
| CGCAATGGCAGTTCCCACTG+CGG | - | chr3_4:70756733-70756752 | Msa0518890:intron | 60.0% | |
| GCAATGGCAGTTCCCACTGC+GGG | - | chr3_4:70756734-70756753 | Msa0518890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 70756394 | 70757240 | 70756394 | ID=Msa0518890;Name=Msa0518890 |
| chr3_4 | mRNA | 70756394 | 70757240 | 70756394 | ID=Msa0518890-mRNA-1;Parent=Msa0518890;Name=Msa0518890-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|3|0|163 |
| chr3_4 | exon | 70757040 | 70757240 | 70757040 | ID=Msa0518890-mRNA-1:exon:19354;Parent=Msa0518890-mRNA-1 |
| chr3_4 | exon | 70756811 | 70756957 | 70756811 | ID=Msa0518890-mRNA-1:exon:19353;Parent=Msa0518890-mRNA-1 |
| chr3_4 | exon | 70756394 | 70756537 | 70756394 | ID=Msa0518890-mRNA-1:exon:19352;Parent=Msa0518890-mRNA-1 |
| chr3_4 | CDS | 70757040 | 70757240 | 70757040 | ID=Msa0518890-mRNA-1:cds;Parent=Msa0518890-mRNA-1 |
| chr3_4 | CDS | 70756811 | 70756957 | 70756811 | ID=Msa0518890-mRNA-1:cds;Parent=Msa0518890-mRNA-1 |
| chr3_4 | CDS | 70756394 | 70756537 | 70756394 | ID=Msa0518890-mRNA-1:cds;Parent=Msa0518890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
