AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0520230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520230 MtrunA17_Chr3g0136601 97.682 949 22 0 1 949 1 949 0.0 1922
Msa0520230 MtrunA17_Chr1g0150511 70.108 1017 225 17 1 948 5 1011 0.0 1375
Msa0520230 MtrunA17_Chr1g0150531 75.377 398 87 3 39 435 2 389 0.0 605
Msa0520230 MtrunA17_Chr8g0377481 36.232 276 165 4 373 646 395 661 6.32e-39 156
Msa0520230 MtrunA17_Chr8g0377481 31.034 145 80 2 805 948 842 967 3.53e-15 80.5
Msa0520230 MtrunA17_Chr3g0122391 35.395 291 177 5 373 660 443 725 6.54e-38 153
Msa0520230 MtrunA17_Chr3g0122391 31.333 150 82 3 801 949 896 1025 1.44e-14 78.6
Msa0520230 MtrunA17_Chr8g0392301 34.564 298 174 5 373 652 386 680 1.37e-35 146
Msa0520230 MtrunA17_Chr8g0392301 31.447 159 96 3 792 949 849 995 2.87e-17 87.4
Msa0520230 MtrunA17_Chr5g0447641 34.043 282 169 7 373 646 620 892 2.58e-35 145
Msa0520230 MtrunA17_Chr5g0447641 35.115 131 77 2 805 934 1075 1198 8.61e-15 79.3
Msa0520230 MtrunA17_Chr4g0013831 31.778 343 179 11 331 665 300 595 2.65e-34 141
Msa0520230 MtrunA17_Chr7g0269631 34.130 293 146 8 375 664 349 597 6.65e-33 135
Msa0520230 MtrunA17_Chr8g0371601 31.250 272 166 5 373 642 474 726 5.30e-27 119
Msa0520230 MtrunA17_Chr8g0371601 29.775 178 82 3 785 944 1010 1162 9.37e-13 72.8
Msa0520230 MtrunA17_Chr5g0405701 32.014 278 168 5 373 648 512 770 1.51e-25 114
Msa0520230 MtrunA17_Chr1g0197591 28.571 315 184 11 344 646 363 648 6.44e-19 92.8
Msa0520230 MtrunA17_Chr1g0194741 27.302 315 178 13 335 628 368 652 1.37e-13 75.1
Msa0520230 MtrunA17_Chr1g0190021 26.531 196 128 5 331 515 327 517 9.95e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520230 AT5G10720.1 58.471 968 331 15 1 948 5 921 0.0 1094
Msa0520230 AT1G27320.1 37.545 277 158 5 373 646 453 717 2.57e-40 162
Msa0520230 AT1G27320.1 30.345 145 93 2 805 948 891 1028 6.02e-15 80.1
Msa0520230 AT5G10680.2 46.429 168 83 4 1 168 1 161 1.48e-38 144
Msa0520230 AT5G10680.1 46.429 168 83 4 1 168 1 161 1.48e-38 144
Msa0520230 AT2G01830.2 35.192 287 166 6 373 646 475 754 1.75e-36 149
Msa0520230 AT2G01830.2 31.544 149 82 3 787 934 928 1057 1.73e-13 75.5
Msa0520230 AT2G01830.5 35.192 287 166 6 373 646 464 743 1.87e-36 149
Msa0520230 AT2G01830.5 31.544 149 82 3 787 934 917 1046 1.89e-13 75.5
Msa0520230 AT2G01830.1 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0520230 AT2G01830.1 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0520230 AT2G01830.4 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0520230 AT2G01830.4 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0520230 AT2G01830.6 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0520230 AT2G01830.6 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0520230 AT2G01830.3 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0520230 AT2G01830.3 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0520230 AT5G35750.1 36.879 282 160 8 373 646 590 861 1.16e-35 147
Msa0520230 AT5G35750.1 35.878 131 76 3 805 934 1036 1159 1.99e-14 78.6
Msa0520230 AT2G40940.1 32.110 327 173 9 330 648 298 583 1.33e-29 125
Msa0520230 AT2G17820.1 31.655 278 169 4 373 648 501 759 1.76e-27 120
Msa0520230 AT1G66340.1 27.628 333 186 7 331 655 299 584 2.15e-27 119
Msa0520230 AT2G47430.1 29.022 317 197 10 341 646 366 665 1.00e-22 105
Msa0520230 AT5G26594.1 33.099 142 61 4 802 940 16 126 2.03e-11 63.2

Find 165 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGCTCCTGTTGTTAT+TGG 0.154518 3_4:-72711098 Msa0520230:CDS
CTCACAAATTTCACAGAAAA+AGG 0.181280 3_4:-72711596 Msa0520230:CDS
ATATAGAAACCGGTCGTTTA+TGG 0.218811 3_4:+72711405 None:intergenic
CAATTCCAACCTCCCAATTT+AGG 0.220850 3_4:-72708396 Msa0520230:CDS
CAATACATAGTTTATTTAAA+AGG 0.226595 3_4:-72708847 Msa0520230:CDS
TAAACGACCGGTTTCTATAT+TGG 0.230609 3_4:-72711402 Msa0520230:CDS
GCTAAGGAAGTTGGAGATAT+TGG 0.232044 3_4:-72711462 Msa0520230:CDS
TGGATGATATTTATGATATA+TGG 0.239075 3_4:-72711382 Msa0520230:CDS
AGAGACTAGATGGCCTAAAT+TGG 0.246731 3_4:+72708383 None:intergenic
GCTTGAAGACCATCCATAAT+TGG 0.260574 3_4:+72707714 None:intergenic
GAGATAAGATCTCCACTTTC+TGG 0.266189 3_4:-72710305 Msa0520230:CDS
CAATAACAACAGGAGCATTT+TGG 0.278884 3_4:+72711099 None:intergenic
CATCCTGTCTTTGTTTGTTT+AGG 0.281414 3_4:+72711489 None:intergenic
GCCTTCATTTGTAAATTTGA+TGG 0.281976 3_4:+72709298 None:intergenic
AAACTTCCCTCTTAAAATCT+TGG 0.284644 3_4:+72710867 None:intergenic
AACATAGATGTTGTCAATAA+TGG 0.290513 3_4:-72707964 Msa0520230:CDS
TACCTCTCTAGGTCGAAATT+TGG 0.290931 3_4:+72709769 None:intergenic
CTTAGGCTTTGATATGGATT+TGG 0.306792 3_4:+72708056 None:intergenic
GGATGTGTGCATGCCAATTA+TGG 0.314902 3_4:-72707727 Msa0520230:CDS
AACATATCTTGATCATTTCC+TGG 0.315890 3_4:+72711680 None:intergenic
GGGTAGACTTTGCTCGATTC+CGG 0.321938 3_4:+72707635 None:intergenic
AAGGATCTTAGGCTTTGATA+TGG 0.321955 3_4:+72708050 None:intergenic
CATGTTGTCATCTGGAGATT+TGG 0.337835 3_4:-72710213 Msa0520230:CDS
ATCTGCTACATGTCCTTCTA+TGG 0.343030 3_4:+72709697 None:intergenic
GATCTTTCCAAGGTTGAATC+AGG 0.345581 3_4:-72710164 Msa0520230:intron
GTGAGTTCTGTTTGCTCCAC+TGG 0.347782 3_4:+72708359 None:intergenic
AAGAATCTGCAATACCATTC+TGG 0.355194 3_4:+72708142 None:intergenic
TTGGCTCTTGCACAACATAA+AGG 0.355853 3_4:+72709261 None:intergenic
AGTTGATGATTCAAATTCAT+TGG 0.362860 3_4:-72708241 Msa0520230:CDS
ATGGGAATTCGCTTTGTAGA+TGG 0.376345 3_4:+72707588 None:intergenic
AGAGTGTGTTGAGGATATTA+TGG 0.378342 3_4:-72711777 Msa0520230:CDS
TTTCACTACATTCACAGAAA+TGG 0.384669 3_4:+72709190 None:intergenic
GTAGATCACGCTCGAAAGTA+TGG 0.384965 3_4:-72708809 Msa0520230:CDS
CTTTCGAGGAAACAGGCAAT+TGG 0.386287 3_4:-72707674 Msa0520230:CDS
CATTCGTAATTGCAGGTCAT+TGG 0.389666 3_4:-72709535 Msa0520230:intron
CAGAAAATATTAACCATAGA+AGG 0.390045 3_4:-72709710 Msa0520230:CDS
AATAAAACCATTCACATAAC+AGG 0.395118 3_4:-72710473 Msa0520230:intron
TGCAGATTCTTCTCAGCATA+TGG 0.396404 3_4:-72708130 Msa0520230:CDS
TCTTCAACAAGAAGGATCTT+AGG 0.397498 3_4:+72708039 None:intergenic
TTCAAGCAACAAAACTAATT+CGG 0.398524 3_4:-72707698 Msa0520230:CDS
AAATGTGTCATCACCTCTAT+AGG 0.404208 3_4:+72709668 None:intergenic
CTAAATTGGGAGGTTGGAAT+TGG 0.404734 3_4:+72708397 None:intergenic
CAATCAACCTGTTATGTGAA+TGG 0.404844 3_4:+72710466 None:intergenic
ATTCGGTCTTTCGAGGAAAC+AGG 0.407480 3_4:-72707681 Msa0520230:CDS
TCCTGTTGTTATTGGCCATC+AGG 0.408491 3_4:-72711090 Msa0520230:CDS
GCCATCAAATTTACAAATGA+AGG 0.414139 3_4:-72709299 Msa0520230:CDS
ACGTCAGCTCCAATATCTTC+TGG 0.420722 3_4:+72711728 None:intergenic
TTTACAAATGAAGGCAAAGT+AGG 0.421277 3_4:-72709290 Msa0520230:CDS
GTGTCTAGCAAAGAACAAAA+TGG 0.421334 3_4:-72708549 Msa0520230:CDS
TATACTCCCAATGTTTCATA+AGG 0.422050 3_4:+72711555 None:intergenic
TTCTGCATAGGTTGAGTTGA+TGG 0.425115 3_4:-72708586 Msa0520230:intron
TTGGATGTCATGTTGTCATC+TGG 0.426050 3_4:-72710221 Msa0520230:CDS
AGCAAGGCAGGTGAAACAAT+TGG 0.429476 3_4:-72710752 Msa0520230:CDS
ATCGAGCATTCACTCTTAAC+CGG 0.430609 3_4:+72709131 None:intergenic
CAAGCGATCGAGACCTTGTA+TGG 0.430770 3_4:+72708504 None:intergenic
TCACCTGCCTTGCTGAAGAC+AGG 0.433507 3_4:+72710761 None:intergenic
GCTCGAAAGTATGGTGGGAC+AGG 0.435553 3_4:-72708800 Msa0520230:CDS
ATATCTTCTGGCCACATTGA+AGG 0.436714 3_4:+72711740 None:intergenic
AGCGTACAAAAGATTAGTTC+AGG 0.440570 3_4:-72709221 Msa0520230:CDS
TCAATGTGGCCAGAAGATAT+TGG 0.443354 3_4:-72711737 Msa0520230:CDS
AAGTATGGTGGGACAGGGCT+AGG 0.445638 3_4:-72708794 Msa0520230:CDS
GGATGTTGAGCTAAGGAAGT+TGG 0.448739 3_4:-72711471 Msa0520230:CDS
ACTTTCTGGTGTTGTTAGCA+TGG 0.454583 3_4:-72710291 Msa0520230:CDS
ATTCACTGGATCTGGTGTTA+AGG 0.458619 3_4:-72710894 Msa0520230:CDS
TCCAATGACAACATATCAAA+AGG 0.462175 3_4:-72708273 Msa0520230:CDS
ATATCATCCAATATAGAAAC+CGG 0.463376 3_4:+72711395 None:intergenic
ATTACCTCCTCATGTAAACT+TGG 0.464486 3_4:+72711029 None:intergenic
TCCTGATGGCCAATAACAAC+AGG 0.466242 3_4:+72711089 None:intergenic
CTCCACTGGAAGAGACTAGA+TGG 0.466828 3_4:+72708373 None:intergenic
GGTTGTGATGTATATGATAC+AGG 0.469429 3_4:-72709056 Msa0520230:CDS
AAAACTAATTCGGTCTTTCG+AGG 0.469760 3_4:-72707688 Msa0520230:CDS
ACTAGCAATATGCAAACAAC+TGG 0.471382 3_4:-72708771 Msa0520230:intron
TTTCGAGGAAACAGGCAATT+GGG 0.473287 3_4:-72707673 Msa0520230:CDS
ACAATATTCATAATCTCGAT+TGG 0.473357 3_4:+72707614 None:intergenic
AGCCTACCTTATGAAACATT+GGG 0.475348 3_4:-72711561 Msa0520230:CDS
ATTTGAGAGAGTTCTTCAAC+AGG 0.477140 3_4:+72711158 None:intergenic
GATGCACTTGGAAAAGTTGT+TGG 0.486450 3_4:-72711258 Msa0520230:CDS
GAGACTAGATGGCCTAAATT+GGG 0.487886 3_4:+72708384 None:intergenic
TCTTGTTATCTTCAACAAGA+AGG 0.489724 3_4:+72708031 None:intergenic
ACCTCAACTCTTTGTCCTGA+TGG 0.491700 3_4:+72711075 None:intergenic
GAACCTGTCTTCAGCAAGGC+AGG 0.495617 3_4:-72710764 Msa0520230:CDS
ATGACCCAACTGTTTCATCA+TGG 0.497053 3_4:+72707987 None:intergenic
CACATTCATACTTCCATACA+AGG 0.497367 3_4:-72708517 Msa0520230:CDS
TAGCCTACCTTATGAAACAT+TGG 0.501009 3_4:-72711562 Msa0520230:CDS
TTTCCAACCTGATTCAACCT+TGG 0.502835 3_4:+72710157 None:intergenic
GGGAATGGATGTAACAGATC+AGG 0.507588 3_4:-72710717 Msa0520230:intron
CAAGGAGCAAAGACAGCTGT+TGG 0.510482 3_4:-72710240 Msa0520230:CDS
TGGAATCAATTACATGGGAA+TGG 0.513449 3_4:-72710732 Msa0520230:CDS
GTCGAAATATTCACTGGATC+TGG 0.516463 3_4:-72710902 Msa0520230:CDS
AGTATGATACTGTTGTGTAC+TGG 0.516963 3_4:-72711292 Msa0520230:CDS
GATGGCCTAAATTGGGAGGT+TGG 0.523038 3_4:+72708391 None:intergenic
AGTGTATTGAACAATACTTA+AGG 0.523347 3_4:-72707283 Msa0520230:CDS
AACAATTGGAATCAATTACA+TGG 0.523571 3_4:-72710738 Msa0520230:CDS
AGCAGATGATGTACCTATAG+AGG 0.523933 3_4:-72709681 Msa0520230:intron
CAACCTAAACAAACAAAGAC+AGG 0.527200 3_4:-72711492 Msa0520230:CDS
ATTGGAAGAACATAGATTTG+AGG 0.528522 3_4:-72711444 Msa0520230:CDS
CTGTGTAGGAGTTATGAAGT+TGG 0.528994 3_4:-72709798 Msa0520230:intron
ATGCTAACAACACCAGAAAG+TGG 0.529641 3_4:+72710293 None:intergenic
TCTGCATAGGTTGAGTTGAT+GGG 0.531045 3_4:-72708585 Msa0520230:intron
CTTTCCAAGTTTACATGAGG+AGG 0.532167 3_4:-72711033 Msa0520230:intron
ACTGATGTCGAAATATTCAC+TGG 0.534032 3_4:-72710908 Msa0520230:CDS
ACATGCTTTACTACCTCTCT+AGG 0.534889 3_4:+72709758 None:intergenic
GATGTATATGATACAGGCAT+TGG 0.535140 3_4:-72709050 Msa0520230:CDS
CAATATTCATAATCTCGATT+GGG 0.535165 3_4:+72707615 None:intergenic
CTCAGATGAATTCTCAGACA+TGG 0.538037 3_4:-72708466 Msa0520230:CDS
CTAGTGCTTACCGCAACAAT+GGG 0.538212 3_4:+72707570 None:intergenic
GGCCATCTAGTCTCTTCCAG+TGG 0.542757 3_4:-72708375 Msa0520230:CDS
ACAATCCATGATGAAACAGT+TGG 0.545179 3_4:-72707992 Msa0520230:CDS
TCTAGTGCTTACCGCAACAA+TGG 0.547183 3_4:+72707569 None:intergenic
TAATGATGAGTGTAGATCTC+CGG 0.548746 3_4:-72709150 Msa0520230:CDS
GAAACATTGGGAGTATAAGC+AGG 0.551772 3_4:-72711549 Msa0520230:CDS
TGGAGCAGAGGCGGTGCGTG+CGG 0.557895 3_4:-72707944 Msa0520230:CDS
TTACAAATGAAGGCAAAGTA+GGG 0.560913 3_4:-72709289 Msa0520230:CDS
TATGTTGTCATTGGAAGTAG+AGG 0.564452 3_4:+72708281 None:intergenic
TGACATACTTGATCTTTCCA+AGG 0.565536 3_4:-72710174 Msa0520230:CDS
TACATATGACCTGGTTCTGA+TGG 0.568683 3_4:-72707911 Msa0520230:intron
GCACTTGGAAAAGTTGTTGG+AGG 0.568733 3_4:-72711255 Msa0520230:CDS
GAAACAGCGAGCGATGCACT+TGG 0.570341 3_4:-72711270 Msa0520230:CDS
CAATCCATGATGAAACAGTT+GGG 0.571813 3_4:-72707991 Msa0520230:CDS
AGATAACAAGATTAACATCA+TGG 0.572107 3_4:-72708019 Msa0520230:CDS
CATTATATAGATGATGTTTG+TGG 0.574874 3_4:+72708178 None:intergenic
TTCCACCACAAAACTTGACA+AGG 0.576173 3_4:-72710258 Msa0520230:CDS
TATGAGAGCAAAGAAAGTGC+TGG 0.576593 3_4:-72710342 Msa0520230:CDS
GGAGTATAAGCAGGCGAGCG+TGG 0.578452 3_4:-72711540 Msa0520230:CDS
ATGATGCTGCGGCTGTCTGA+AGG 0.579152 3_4:+72709735 None:intergenic
CCTCATGTAAACTTGGAAAG+TGG 0.579172 3_4:+72711036 None:intergenic
AGATTTGAGGACGAAAGATA+CGG 0.579302 3_4:-72711431 Msa0520230:CDS
ATCTATATAATGCTCATGCA+TGG 0.579361 3_4:-72708167 Msa0520230:CDS
TCTGATGATACAACAACAGA+AGG 0.580893 3_4:-72708426 Msa0520230:CDS
CCACTTTCCAAGTTTACATG+AGG 0.590769 3_4:-72711036 Msa0520230:CDS
AAAGACAGGATGTTGAGCTA+AGG 0.596277 3_4:-72711478 Msa0520230:CDS
CTCGAAAGTATGGTGGGACA+GGG 0.596487 3_4:-72708799 Msa0520230:CDS
TACCAAATTTCGACCTAGAG+AGG 0.598602 3_4:-72709771 Msa0520230:CDS
GCTCATGCATGGTTCCAGAA+TGG 0.599781 3_4:-72708156 Msa0520230:CDS
AAGAGTGAATGCTCGATGAA+CGG 0.601254 3_4:-72709125 Msa0520230:CDS
CAGTTCAATATAGAAAAGCC+AGG 0.602854 3_4:-72711698 Msa0520230:CDS
GAAGATATTGGAGCTGACGT+TGG 0.611663 3_4:-72711725 Msa0520230:CDS
GATACAGGCATTGGAATACC+AGG 0.612622 3_4:-72709041 Msa0520230:intron
AAAGCGAATTCCCATTGTTG+CGG 0.612866 3_4:-72707580 Msa0520230:intron
CTTCTGGCCACATTGAAGGA+AGG 0.613983 3_4:+72711744 None:intergenic
AATGCAACAACAGTGTGGAT+AGG 0.617754 3_4:-72709077 Msa0520230:CDS
ACAATTGGAATCAATTACAT+GGG 0.619533 3_4:-72710737 Msa0520230:CDS
ATCACGCTCGAAAGTATGGT+GGG 0.619892 3_4:-72708805 Msa0520230:CDS
CATAAATTACCATCAGAACC+AGG 0.627013 3_4:+72707902 None:intergenic
TGTAGAACCTGTCTTCAGCA+AGG 0.629088 3_4:-72710768 Msa0520230:CDS
GTGTGCATGCCAATTATGGA+TGG 0.635228 3_4:-72707723 Msa0520230:CDS
AAATTCTCACAAATTTAACC+AGG 0.643959 3_4:-72709492 Msa0520230:intron
CTCCCAATGTTTCATAAGGT+AGG 0.643980 3_4:+72711559 None:intergenic
GCATAGGTTGAGTTGATGGG+AGG 0.644228 3_4:-72708582 Msa0520230:intron
TCAGCGCTGTACATATGACC+TGG 0.644473 3_4:-72707920 Msa0520230:CDS
ATACGGAGGCCATAAACGAC+CGG 0.646119 3_4:-72711414 Msa0520230:CDS
AGATTCTTCTCAGCATATGG+TGG 0.646433 3_4:-72708127 Msa0520230:CDS
GATTGCTGTTCAGAAAGCAA+AGG 0.648370 3_4:-72710507 Msa0520230:CDS
TGTCAATAATGGAGCAGAGG+CGG 0.649552 3_4:-72707953 Msa0520230:CDS
GAAAATCCACAAAATTTGTG+CGG 0.650564 3_4:+72708324 None:intergenic
ATGTTGTCATTGGAAGTAGA+GGG 0.650718 3_4:+72708282 None:intergenic
GATCACGCTCGAAAGTATGG+TGG 0.655464 3_4:-72708806 Msa0520230:CDS
GCCATCAGGACAAAGAGTTG+AGG 0.656169 3_4:-72711076 Msa0520230:CDS
TGTTGTCAATAATGGAGCAG+AGG 0.659976 3_4:-72707956 Msa0520230:CDS
TTGAAGTCCTTCCTTCAATG+TGG 0.668513 3_4:-72711751 Msa0520230:CDS
ACTAGATGGCCTAAATTGGG+AGG 0.678417 3_4:+72708387 None:intergenic
ACTCAAATGCAACAACAGTG+TGG 0.687455 3_4:-72709082 Msa0520230:CDS
CTCGATGAACGGAGACACAG+AGG 0.693267 3_4:-72709114 Msa0520230:CDS
GTATGGAAGTATGAATGTGA+AGG 0.713387 3_4:+72708521 None:intergenic
TTTGAGGACGAAAGATACGG+AGG 0.715280 3_4:-72711428 Msa0520230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTATTTTTTAAATTTT+TGG - chr3_4:72708458-72708477 Msa0520230:CDS 10.0%
!! AATTATTTAAACTTATCTAT+TGG - chr3_4:72708972-72708991 Msa0520230:intron 10.0%
!!! TTTCTATTATATTTTGTTAT+AGG - chr3_4:72709107-72709126 Msa0520230:CDS 10.0%
!!! TTCTATTATATTTTGTTATA+GGG - chr3_4:72709108-72709127 Msa0520230:CDS 10.0%
!!! TTTTCTAATTAATATGTTAA+TGG + chr3_4:72711531-72711550 None:intergenic 10.0%
!!! AAAACTAATTAATTTGATAG+AGG + chr3_4:72708656-72708675 None:intergenic 15.0%
!! TTAAATAATTCAATCTAAAC+AGG + chr3_4:72708962-72708981 None:intergenic 15.0%
!! CAATACATAGTTTATTTAAA+AGG - chr3_4:72710218-72710237 Msa0520230:CDS 15.0%
!! TGGATGATATTTATGATATA+TGG - chr3_4:72707683-72707702 Msa0520230:CDS 20.0%
! ATATCATCCAATATAGAAAC+CGG + chr3_4:72707673-72707692 None:intergenic 25.0%
!!! TTTCTGTCATATCTTTTTTC+AGG - chr3_4:72708120-72708139 Msa0520230:CDS 25.0%
!!! ATCTTTTTTCAGGACATAAT+AGG - chr3_4:72708130-72708149 Msa0520230:CDS 25.0%
! AACAATTGGAATCAATTACA+TGG - chr3_4:72708327-72708346 Msa0520230:CDS 25.0%
! ACAATTGGAATCAATTACAT+GGG - chr3_4:72708328-72708347 Msa0520230:CDS 25.0%
! ATGAATCTCTTGAAAAATGT+AGG - chr3_4:72708498-72708517 Msa0520230:CDS 25.0%
! AATAAAACCATTCACATAAC+AGG - chr3_4:72708592-72708611 Msa0520230:intron 25.0%
!! TTTCCTCATCTTTTTAATAG+AGG - chr3_4:72708696-72708715 Msa0520230:intron 25.0%
! TTTCCTCTATTAAAAAGATG+AGG + chr3_4:72708702-72708721 None:intergenic 25.0%
! CAGAAAATATTAACCATAGA+AGG - chr3_4:72709355-72709374 Msa0520230:intron 25.0%
! AAATTCTCACAAATTTAACC+AGG - chr3_4:72709573-72709592 Msa0520230:intron 25.0%
! TCACATAAATATTTAGTACC+TGG + chr3_4:72709594-72709613 None:intergenic 25.0%
! GTAGTGAAAGAAGAAAAATA+TGG - chr3_4:72709889-72709908 Msa0520230:intron 25.0%
! TAGTTATAGTAGATAATACC+TGG + chr3_4:72710045-72710064 None:intergenic 25.0%
! AAACAGAAGAATAGAGATTA+AGG + chr3_4:72710097-72710116 None:intergenic 25.0%
!! AATTTCTTGTGTAGAGTATT+TGG - chr3_4:72710319-72710338 Msa0520230:CDS 25.0%
! ATAAAATGTAACTTCTGCAT+AGG - chr3_4:72710467-72710486 Msa0520230:intron 25.0%
!!! AGTTGATGATTCAAATTCAT+TGG - chr3_4:72710824-72710843 Msa0520230:CDS 25.0%
! CATTATATAGATGATGTTTG+TGG + chr3_4:72710890-72710909 None:intergenic 25.0%
! AGATAACAAGATTAACATCA+TGG - chr3_4:72711046-72711065 Msa0520230:CDS 25.0%
! AACATAGATGTTGTCAATAA+TGG - chr3_4:72711101-72711120 Msa0520230:CDS 25.0%
! AATATATCAATAAGCAGCAT+TGG + chr3_4:72711265-72711284 None:intergenic 25.0%
! TTCAAGCAACAAAACTAATT+CGG - chr3_4:72711367-72711386 Msa0520230:CDS 25.0%
! CAATATTCATAATCTCGATT+GGG + chr3_4:72711453-72711472 None:intergenic 25.0%
! ACAATATTCATAATCTCGAT+TGG + chr3_4:72711454-72711473 None:intergenic 25.0%
! AGTGTATTGAACAATACTTA+AGG - chr3_4:72711782-72711801 Msa0520230:CDS 25.0%
AACATATCTTGATCATTTCC+TGG + chr3_4:72707388-72707407 Msa0520220:CDS 30.0%
CTCACAAATTTCACAGAAAA+AGG - chr3_4:72707469-72707488 Msa0520230:intron 30.0%
TATACTCCCAATGTTTCATA+AGG + chr3_4:72707513-72707532 None:intergenic 30.0%
ATTGGAAGAACATAGATTTG+AGG - chr3_4:72707621-72707640 Msa0520230:CDS 30.0%
!!! ACAACATTACTTTTTCTGCA+AGG + chr3_4:72707721-72707740 None:intergenic 30.0%
AAACTTCCCTCTTAAAATCT+TGG + chr3_4:72708201-72708220 None:intergenic 30.0%
!! AGATTTTAAGAGGGAAGTTT+TGG - chr3_4:72708201-72708220 Msa0520230:CDS 30.0%
!!! ACTTTTGAGACAGAACTATT+TGG - chr3_4:72708253-72708272 Msa0520230:CDS 30.0%
! GTTACTCCCTATGAAATTTT+TGG - chr3_4:72708383-72708402 Msa0520230:CDS 30.0%
! GCAAAAAAGTATATGTATCC+TGG + chr3_4:72708410-72708429 None:intergenic 30.0%
TTGCTTATATATCGTTTCAG+AGG - chr3_4:72708426-72708445 Msa0520230:CDS 30.0%
TGCTTATATATCGTTTCAGA+GGG - chr3_4:72708427-72708446 Msa0520230:CDS 30.0%
TGTAGGTTAGAAAAAGAGAA+AGG - chr3_4:72708515-72708534 Msa0520230:CDS 30.0%
!! TCTAATATGGATTGGAAACA+AGG + chr3_4:72708939-72708958 None:intergenic 30.0%
TAAACAGGTCTAATATGGAT+TGG + chr3_4:72708947-72708966 None:intergenic 30.0%
CAATCTAAACAGGTCTAATA+TGG + chr3_4:72708952-72708971 None:intergenic 30.0%
!! ATAAGTTGTTTTCAGCGTAT+CGG - chr3_4:72708996-72709015 Msa0520230:intron 30.0%
AGCTATCTTAAAGACTTTAC+AGG + chr3_4:72709049-72709068 None:intergenic 30.0%
! ATCTAGTTTATGTATCACTG+AGG + chr3_4:72709208-72709227 None:intergenic 30.0%
!!! TTGGTGATGTTTTAAGGATT+CGG - chr3_4:72709549-72709568 Msa0520230:intron 30.0%
GCCATCAAATTTACAAATGA+AGG - chr3_4:72709766-72709785 Msa0520230:CDS 30.0%
GCCTTCATTTGTAAATTTGA+TGG + chr3_4:72709770-72709789 None:intergenic 30.0%
TTTACAAATGAAGGCAAAGT+AGG - chr3_4:72709775-72709794 Msa0520230:CDS 30.0%
TTACAAATGAAGGCAAAGTA+GGG - chr3_4:72709776-72709795 Msa0520230:CDS 30.0%
! ACTAATCTTTTGTACGCTTT+CGG + chr3_4:72709842-72709861 None:intergenic 30.0%
TTTCACTACATTCACAGAAA+TGG + chr3_4:72709878-72709897 None:intergenic 30.0%
GAAAATCCACAAAATTTGTG+CGG + chr3_4:72710744-72710763 None:intergenic 30.0%
TCCAATGACAACATATCAAA+AGG - chr3_4:72710792-72710811 Msa0520230:CDS 30.0%
! TCCTTTTGATATGTTGTCAT+TGG + chr3_4:72710796-72710815 None:intergenic 30.0%
ATCTATATAATGCTCATGCA+TGG - chr3_4:72710898-72710917 Msa0520230:CDS 30.0%
! TCTTGTTATCTTCAACAAGA+AGG + chr3_4:72711037-72711056 None:intergenic 30.0%
AATTATTCGTAGAGAGAAAG+TGG + chr3_4:72711210-72711229 None:intergenic 30.0%
ATTTCATAGTTGCACTTTAC+AGG - chr3_4:72711317-72711336 Msa0520230:CDS 30.0%
ATCCTTACTATGAATGTCTT+TGG - chr3_4:72711625-72711644 Msa0520230:CDS 30.0%
TCCTTACTATGAATGTCTTT+GGG - chr3_4:72711626-72711645 Msa0520230:CDS 30.0%
! AGAATGTTTTGCTAATGGTA+TGG - chr3_4:72711717-72711736 Msa0520230:CDS 30.0%
AGAGTGTGTTGAGGATATTA+TGG - chr3_4:72707288-72707307 Msa0520230:CDS 35.0%
CAGTTCAATATAGAAAAGCC+AGG - chr3_4:72707367-72707386 Msa0520230:CDS 35.0%
TAGCCTACCTTATGAAACAT+TGG - chr3_4:72707503-72707522 Msa0520230:intron 35.0%
AGCCTACCTTATGAAACATT+GGG - chr3_4:72707504-72707523 Msa0520230:intron 35.0%
CAACCTAAACAAACAAAGAC+AGG - chr3_4:72707573-72707592 Msa0520230:intron 35.0%
! CATCCTGTCTTTGTTTGTTT+AGG + chr3_4:72707579-72707598 None:intergenic 35.0%
AGATTTGAGGACGAAAGATA+CGG - chr3_4:72707634-72707653 Msa0520230:CDS 35.0%
ATATAGAAACCGGTCGTTTA+TGG + chr3_4:72707663-72707682 None:intergenic 35.0%
! TAAACGACCGGTTTCTATAT+TGG - chr3_4:72707663-72707682 Msa0520230:CDS 35.0%
AGTATGATACTGTTGTGTAC+TGG - chr3_4:72707773-72707792 Msa0520230:intron 35.0%
ATTTGAGAGAGTTCTTCAAC+AGG + chr3_4:72707910-72707929 None:intergenic 35.0%
!!! CAATAACAACAGGAGCATTT+TGG + chr3_4:72707969-72707988 None:intergenic 35.0%
CAAAATGCTCCTGTTGTTAT+TGG - chr3_4:72707967-72707986 Msa0520230:CDS 35.0%
ATTACCTCCTCATGTAAACT+TGG + chr3_4:72708039-72708058 None:intergenic 35.0%
TGTTGAAGCTCTTCTTGAAA+AGG - chr3_4:72708068-72708087 Msa0520230:CDS 35.0%
ACTGATGTCGAAATATTCAC+TGG - chr3_4:72708157-72708176 Msa0520230:CDS 35.0%
! AGGAGAACCAAGATTTTAAG+AGG - chr3_4:72708191-72708210 Msa0520230:CDS 35.0%
!! GGAGAACCAAGATTTTAAGA+GGG - chr3_4:72708192-72708211 Msa0520230:CDS 35.0%
!!! AAGAGGGAAGTTTTGGAAAA+AGG - chr3_4:72708208-72708227 Msa0520230:CDS 35.0%
AAAAAGGATTGCCTGCAAAA+AGG - chr3_4:72708224-72708243 Msa0520230:CDS 35.0%
AAAAGGATTGCCTGCAAAAA+GGG - chr3_4:72708225-72708244 Msa0520230:CDS 35.0%
! AAAGTGATTTCCCTTTTTGC+AGG + chr3_4:72708238-72708257 None:intergenic 35.0%
TGGAATCAATTACATGGGAA+TGG - chr3_4:72708333-72708352 Msa0520230:CDS 35.0%
CCTGGTCCAAAAATTTCATA+GGG + chr3_4:72708392-72708411 None:intergenic 35.0%
TCCTGGTCCAAAAATTTCAT+AGG + chr3_4:72708393-72708412 None:intergenic 35.0%
GGTTAGAAAAAGAGAAAGGA+TGG - chr3_4:72708519-72708538 Msa0520230:CDS 35.0%
CAATCAACCTGTTATGTGAA+TGG + chr3_4:72708602-72708621 None:intergenic 35.0%
TGACATACTTGATCTTTCCA+AGG - chr3_4:72708891-72708910 Msa0520230:intron 35.0%
! CTACACAGAATGCAGATTTT+GGG + chr3_4:72709255-72709274 None:intergenic 35.0%
! TATTTTCTGCAATGATGCTG+CGG + chr3_4:72709344-72709363 None:intergenic 35.0%
AAATGTGTCATCACCTCTAT+AGG + chr3_4:72709400-72709419 None:intergenic 35.0%
!!! AGGTCATTGGTGATGTTTTA+AGG - chr3_4:72709543-72709562 Msa0520230:intron 35.0%
TTTACACCTTCAGTGTGTAT+CGG - chr3_4:72709676-72709695 Msa0520230:intron 35.0%
!!! CTTTCGGGTTTTGTAAAACT+TGG + chr3_4:72709826-72709845 None:intergenic 35.0%
! CTAATCTTTTGTACGCTTTC+GGG + chr3_4:72709841-72709860 None:intergenic 35.0%
! AGCGTACAAAAGATTAGTTC+AGG - chr3_4:72709844-72709863 Msa0520230:intron 35.0%
TAATGATGAGTGTAGATCTC+CGG - chr3_4:72709915-72709934 Msa0520230:intron 35.0%
GGTTGTGATGTATATGATAC+AGG - chr3_4:72710009-72710028 Msa0520230:intron 35.0%
GATGTATATGATACAGGCAT+TGG - chr3_4:72710015-72710034 Msa0520230:intron 35.0%
ACTAGCAATATGCAAACAAC+TGG - chr3_4:72710294-72710313 Msa0520230:CDS 35.0%
! GTGTAGAGTATTTGGTTACA+TGG - chr3_4:72710327-72710346 Msa0520230:CDS 35.0%
GTGTCTAGCAAAGAACAAAA+TGG - chr3_4:72710516-72710535 Msa0520230:CDS 35.0%
! GTATGGAAGTATGAATGTGA+AGG + chr3_4:72710547-72710566 None:intergenic 35.0%
CACATTCATACTTCCATACA+AGG - chr3_4:72710548-72710567 Msa0520230:CDS 35.0%
TCTGATGATACAACAACAGA+AGG - chr3_4:72710639-72710658 Msa0520230:intron 35.0%
! TTATTGCCGCACAAATTTTG+TGG - chr3_4:72710735-72710754 Msa0520230:CDS 35.0%
ATGTTGTCATTGGAAGTAGA+GGG + chr3_4:72710786-72710805 None:intergenic 35.0%
TATGTTGTCATTGGAAGTAG+AGG + chr3_4:72710787-72710806 None:intergenic 35.0%
AAGAATCTGCAATACCATTC+TGG + chr3_4:72710926-72710945 None:intergenic 35.0%
! CTTAGGCTTTGATATGGATT+TGG + chr3_4:72711012-72711031 None:intergenic 35.0%
! AAGGATCTTAGGCTTTGATA+TGG + chr3_4:72711018-72711037 None:intergenic 35.0%
TCTTCAACAAGAAGGATCTT+AGG + chr3_4:72711029-72711048 None:intergenic 35.0%
ACAATCCATGATGAAACAGT+TGG - chr3_4:72711073-72711092 Msa0520230:CDS 35.0%
CAATCCATGATGAAACAGTT+GGG - chr3_4:72711074-72711093 Msa0520230:CDS 35.0%
CATAAATTACCATCAGAACC+AGG + chr3_4:72711166-72711185 None:intergenic 35.0%
!! CTGGTTCTGATGGTAATTTA+TGG - chr3_4:72711164-72711183 Msa0520230:CDS 35.0%
AAAACTAATTCGGTCTTTCG+AGG - chr3_4:72711377-72711396 Msa0520230:CDS 35.0%
TCCCAAAGACATTCATAGTA+AGG + chr3_4:72711630-72711649 None:intergenic 35.0%
! GCTGAAGAATGTTTTGCTAA+TGG - chr3_4:72711712-72711731 Msa0520230:CDS 35.0%
! TTCAATTTTCGTAAACTCGC+AGG + chr3_4:72711760-72711779 None:intergenic 35.0%
TTGAAGTCCTTCCTTCAATG+TGG - chr3_4:72707314-72707333 Msa0520230:CDS 40.0%
ATATCTTCTGGCCACATTGA+AGG + chr3_4:72707328-72707347 Msa0520220:intron 40.0%
TCAATGTGGCCAGAAGATAT+TGG - chr3_4:72707328-72707347 Msa0520230:CDS 40.0%
CTCCCAATGTTTCATAAGGT+AGG + chr3_4:72707509-72707528 None:intergenic 40.0%
! GAAACATTGGGAGTATAAGC+AGG - chr3_4:72707516-72707535 Msa0520230:intron 40.0%
AAAGACAGGATGTTGAGCTA+AGG - chr3_4:72707587-72707606 Msa0520230:CDS 40.0%
GCTAAGGAAGTTGGAGATAT+TGG - chr3_4:72707603-72707622 Msa0520230:CDS 40.0%
GATGCACTTGGAAAAGTTGT+TGG - chr3_4:72707807-72707826 Msa0520230:intron 40.0%
CCTCATGTAAACTTGGAAAG+TGG + chr3_4:72708032-72708051 None:intergenic 40.0%
CCACTTTCCAAGTTTACATG+AGG - chr3_4:72708029-72708048 Msa0520230:CDS 40.0%
CTTTCCAAGTTTACATGAGG+AGG - chr3_4:72708032-72708051 Msa0520230:CDS 40.0%
GTCGAAATATTCACTGGATC+TGG - chr3_4:72708163-72708182 Msa0520230:CDS 40.0%
! ATTCACTGGATCTGGTGTTA+AGG - chr3_4:72708171-72708190 Msa0520230:CDS 40.0%
!! CCCTATGAAATTTTTGGACC+AGG - chr3_4:72708389-72708408 Msa0520230:CDS 40.0%
! GATTGCTGTTCAGAAAGCAA+AGG - chr3_4:72708558-72708577 Msa0520230:CDS 40.0%
! TATGAGAGCAAAGAAAGTGC+TGG - chr3_4:72708723-72708742 Msa0520230:intron 40.0%
GAGATAAGATCTCCACTTTC+TGG - chr3_4:72708760-72708779 Msa0520230:intron 40.0%
ATGCTAACAACACCAGAAAG+TGG + chr3_4:72708775-72708794 None:intergenic 40.0%
!! ACTTTCTGGTGTTGTTAGCA+TGG - chr3_4:72708774-72708793 Msa0520230:CDS 40.0%
TTCCACCACAAAACTTGACA+AGG - chr3_4:72708807-72708826 Msa0520230:CDS 40.0%
! TTGCTCCTTGTCAAGTTTTG+TGG + chr3_4:72708815-72708834 None:intergenic 40.0%
TTGGATGTCATGTTGTCATC+TGG - chr3_4:72708844-72708863 Msa0520230:CDS 40.0%
CATGTTGTCATCTGGAGATT+TGG - chr3_4:72708852-72708871 Msa0520230:CDS 40.0%
GATCTTTCCAAGGTTGAATC+AGG - chr3_4:72708901-72708920 Msa0520230:intron 40.0%
TTTCCAAGGTTGAATCAGGT+TGG - chr3_4:72708905-72708924 Msa0520230:intron 40.0%
TTTCCAACCTGATTCAACCT+TGG + chr3_4:72708911-72708930 None:intergenic 40.0%
! CCTACACAGAATGCAGATTT+TGG + chr3_4:72709256-72709275 None:intergenic 40.0%
CCAAAATCTGCATTCTGTGT+AGG - chr3_4:72709253-72709272 Msa0520230:CDS 40.0%
CTGTGTAGGAGTTATGAAGT+TGG - chr3_4:72709267-72709286 Msa0520230:CDS 40.0%
TACCAAATTTCGACCTAGAG+AGG - chr3_4:72709294-72709313 Msa0520230:CDS 40.0%
TACCTCTCTAGGTCGAAATT+TGG + chr3_4:72709299-72709318 None:intergenic 40.0%
ACATGCTTTACTACCTCTCT+AGG + chr3_4:72709310-72709329 None:intergenic 40.0%
ATCTGCTACATGTCCTTCTA+TGG + chr3_4:72709371-72709390 None:intergenic 40.0%
AGCAGATGATGTACCTATAG+AGG - chr3_4:72709384-72709403 Msa0520230:intron 40.0%
TCATGTCCATCTAGTACACA+TGG + chr3_4:72709448-72709467 None:intergenic 40.0%
TCTGCTTCATTCGTAATTGC+AGG - chr3_4:72709523-72709542 Msa0520230:CDS 40.0%
CATTCGTAATTGCAGGTCAT+TGG - chr3_4:72709530-72709549 Msa0520230:intron 40.0%
ACTTAACCGATACACACTGA+AGG + chr3_4:72709685-72709704 None:intergenic 40.0%
! TTGGCTCTTGCACAACATAA+AGG + chr3_4:72709807-72709826 None:intergenic 40.0%
ATCGAGCATTCACTCTTAAC+CGG + chr3_4:72709937-72709956 None:intergenic 40.0%
AAGAGTGAATGCTCGATGAA+CGG - chr3_4:72709940-72709959 Msa0520230:intron 40.0%
ACTCAAATGCAACAACAGTG+TGG - chr3_4:72709983-72710002 Msa0520230:intron 40.0%
AATGCAACAACAGTGTGGAT+AGG - chr3_4:72709988-72710007 Msa0520230:intron 40.0%
!! TTCTGCATAGGTTGAGTTGA+TGG - chr3_4:72710479-72710498 Msa0520230:CDS 40.0%
!! TCTGCATAGGTTGAGTTGAT+GGG - chr3_4:72710480-72710499 Msa0520230:CDS 40.0%
CTCAGATGAATTCTCAGACA+TGG - chr3_4:72710599-72710618 Msa0520230:intron 40.0%
CTAAATTGGGAGGTTGGAAT+TGG + chr3_4:72710671-72710690 None:intergenic 40.0%
CAATTCCAACCTCCCAATTT+AGG - chr3_4:72710669-72710688 Msa0520230:intron 40.0%
GAGACTAGATGGCCTAAATT+GGG + chr3_4:72710684-72710703 None:intergenic 40.0%
AGAGACTAGATGGCCTAAAT+TGG + chr3_4:72710685-72710704 None:intergenic 40.0%
TGCAGATTCTTCTCAGCATA+TGG - chr3_4:72710935-72710954 Msa0520230:intron 40.0%
AGATTCTTCTCAGCATATGG+TGG - chr3_4:72710938-72710957 Msa0520230:intron 40.0%
ATGACCCAACTGTTTCATCA+TGG + chr3_4:72711081-72711100 None:intergenic 40.0%
! TGTTGTCAATAATGGAGCAG+AGG - chr3_4:72711109-72711128 Msa0520230:CDS 40.0%
!! TACATATGACCTGGTTCTGA+TGG - chr3_4:72711154-72711173 Msa0520230:CDS 40.0%
GCTTGAAGACCATCCATAAT+TGG + chr3_4:72711354-72711373 None:intergenic 40.0%
TTTCGAGGAAACAGGCAATT+GGG - chr3_4:72711392-72711411 Msa0520230:CDS 40.0%
ATGGGAATTCGCTTTGTAGA+TGG + chr3_4:72711480-72711499 None:intergenic 40.0%
AAAGCGAATTCCCATTGTTG+CGG - chr3_4:72711485-72711504 Msa0520230:CDS 40.0%
ACGTCAGCTCCAATATCTTC+TGG + chr3_4:72707340-72707359 Msa0520220:CDS 45.0%
GAAGATATTGGAGCTGACGT+TGG - chr3_4:72707340-72707359 Msa0520230:CDS 45.0%
GGATGTTGAGCTAAGGAAGT+TGG - chr3_4:72707594-72707613 Msa0520230:CDS 45.0%
TTTGAGGACGAAAGATACGG+AGG - chr3_4:72707637-72707656 Msa0520230:CDS 45.0%
GCACTTGGAAAAGTTGTTGG+AGG - chr3_4:72707810-72707829 Msa0520230:intron 45.0%
! TCCTGTTGTTATTGGCCATC+AGG - chr3_4:72707975-72707994 Msa0520230:CDS 45.0%
TCCTGATGGCCAATAACAAC+AGG + chr3_4:72707979-72707998 None:intergenic 45.0%
ACCTCAACTCTTTGTCCTGA+TGG + chr3_4:72707993-72708012 None:intergenic 45.0%
TGTAGAACCTGTCTTCAGCA+AGG - chr3_4:72708297-72708316 Msa0520230:CDS 45.0%
AGCAAGGCAGGTGAAACAAT+TGG - chr3_4:72708313-72708332 Msa0520230:CDS 45.0%
GGGAATGGATGTAACAGATC+AGG - chr3_4:72708348-72708367 Msa0520230:CDS 45.0%
!! CTCCTTGTCAAGTTTTGTGG+TGG + chr3_4:72708812-72708831 None:intergenic 45.0%
!! GAATGCAGATTTTGGGAGGT+AGG + chr3_4:72709248-72709267 None:intergenic 45.0%
! CACAGAATGCAGATTTTGGG+AGG + chr3_4:72709252-72709271 None:intergenic 45.0%
GTGTTGCCATGTGTACTAGA+TGG - chr3_4:72709439-72709458 Msa0520230:intron 45.0%
!! GATACAGGCATTGGAATACC+AGG - chr3_4:72710024-72710043 Msa0520230:intron 45.0%
GTAGATCACGCTCGAAAGTA+TGG - chr3_4:72710256-72710275 Msa0520230:CDS 45.0%
! ATCACGCTCGAAAGTATGGT+GGG - chr3_4:72710260-72710279 Msa0520230:CDS 45.0%
ACTAGATGGCCTAAATTGGG+AGG + chr3_4:72710681-72710700 None:intergenic 45.0%
! TGTCAATAATGGAGCAGAGG+CGG - chr3_4:72711112-72711131 Msa0520230:CDS 45.0%
GGATGTGTGCATGCCAATTA+TGG - chr3_4:72711338-72711357 Msa0520230:CDS 45.0%
GTGTGCATGCCAATTATGGA+TGG - chr3_4:72711342-72711361 Msa0520230:CDS 45.0%
ATTCGGTCTTTCGAGGAAAC+AGG - chr3_4:72711384-72711403 Msa0520230:CDS 45.0%
CTTTCGAGGAAACAGGCAAT+TGG - chr3_4:72711391-72711410 Msa0520230:CDS 45.0%
TGGGATGCTGCAAAAAATGC+CGG - chr3_4:72711411-72711430 Msa0520230:CDS 45.0%
CTAGTGCTTACCGCAACAAT+GGG + chr3_4:72711498-72711517 None:intergenic 45.0%
TCTAGTGCTTACCGCAACAA+TGG + chr3_4:72711499-72711518 None:intergenic 45.0%
CTTCTGGCCACATTGAAGGA+AGG + chr3_4:72707324-72707343 Msa0520220:intron 50.0%
ATACGGAGGCCATAAACGAC+CGG - chr3_4:72707651-72707670 Msa0520230:CDS 50.0%
GCCATCAGGACAAAGAGTTG+AGG - chr3_4:72707989-72708008 Msa0520230:CDS 50.0%
CAAGGAGCAAAGACAGCTGT+TGG - chr3_4:72708825-72708844 Msa0520230:CDS 50.0%
! GATCACGCTCGAAAGTATGG+TGG - chr3_4:72710259-72710278 Msa0520230:CDS 50.0%
! CTCGAAAGTATGGTGGGACA+GGG - chr3_4:72710266-72710285 Msa0520230:CDS 50.0%
!! GCATAGGTTGAGTTGATGGG+AGG - chr3_4:72710483-72710502 Msa0520230:CDS 50.0%
CAAGCGATCGAGACCTTGTA+TGG + chr3_4:72710564-72710583 None:intergenic 50.0%
GATGGCCTAAATTGGGAGGT+TGG + chr3_4:72710677-72710696 None:intergenic 50.0%
CTCCACTGGAAGAGACTAGA+TGG + chr3_4:72710695-72710714 None:intergenic 50.0%
GTGAGTTCTGTTTGCTCCAC+TGG + chr3_4:72710709-72710728 None:intergenic 50.0%
GCTCATGCATGGTTCCAGAA+TGG - chr3_4:72710909-72710928 Msa0520230:CDS 50.0%
TCAGCGCTGTACATATGACC+TGG - chr3_4:72711145-72711164 Msa0520230:CDS 50.0%
GGGTAGACTTTGCTCGATTC+CGG + chr3_4:72711433-72711452 None:intergenic 50.0%
GAAACAGCGAGCGATGCACT+TGG - chr3_4:72707795-72707814 Msa0520230:intron 55.0%
GAACCTGTCTTCAGCAAGGC+AGG - chr3_4:72708301-72708320 Msa0520230:CDS 55.0%
TCACCTGCCTTGCTGAAGAC+AGG + chr3_4:72708307-72708326 None:intergenic 55.0%
ATGATGCTGCGGCTGTCTGA+AGG + chr3_4:72709333-72709352 None:intergenic 55.0%
CTCGATGAACGGAGACACAG+AGG - chr3_4:72709951-72709970 Msa0520230:intron 55.0%
! GCTCGAAAGTATGGTGGGAC+AGG - chr3_4:72710265-72710284 Msa0520230:CDS 55.0%
! AAGTATGGTGGGACAGGGCT+AGG - chr3_4:72710271-72710290 Msa0520230:CDS 55.0%
GGCCATCTAGTCTCTTCCAG+TGG - chr3_4:72710690-72710709 Msa0520230:intron 55.0%
GGAGTATAAGCAGGCGAGCG+TGG - chr3_4:72707525-72707544 Msa0520230:intron 60.0%
TGGAGCAGAGGCGGTGCGTG+CGG - chr3_4:72711121-72711140 Msa0520230:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 72707280 72711807 72707280 ID=Msa0520230;Name=Msa0520230
chr3_4 mRNA 72707280 72711807 72707280 ID=Msa0520230-mRNA-1;Parent=Msa0520230;Name=Msa0520230-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|11|0|949
chr3_4 exon 72711034 72711807 72711034 ID=Msa0520230-mRNA-1:exon:20172;Parent=Msa0520230-mRNA-1
chr3_4 exon 72710718 72710945 72710718 ID=Msa0520230-mRNA-1:exon:20171;Parent=Msa0520230-mRNA-1
chr3_4 exon 72710474 72710567 72710474 ID=Msa0520230-mRNA-1:exon:20170;Parent=Msa0520230-mRNA-1
chr3_4 exon 72710165 72710371 72710165 ID=Msa0520230-mRNA-1:exon:20169;Parent=Msa0520230-mRNA-1
chr3_4 exon 72709682 72709812 72709682 ID=Msa0520230-mRNA-1:exon:20168;Parent=Msa0520230-mRNA-1
chr3_4 exon 72709493 72709542 72709493 ID=Msa0520230-mRNA-1:exon:20167;Parent=Msa0520230-mRNA-1
chr3_4 exon 72709042 72709325 72709042 ID=Msa0520230-mRNA-1:exon:20166;Parent=Msa0520230-mRNA-1
chr3_4 exon 72708772 72708875 72708772 ID=Msa0520230-mRNA-1:exon:20165;Parent=Msa0520230-mRNA-1
chr3_4 exon 72707912 72708598 72707912 ID=Msa0520230-mRNA-1:exon:20164;Parent=Msa0520230-mRNA-1
chr3_4 exon 72707581 72707748 72707581 ID=Msa0520230-mRNA-1:exon:20163;Parent=Msa0520230-mRNA-1
chr3_4 exon 72707280 72707402 72707280 ID=Msa0520230-mRNA-1:exon:20162;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72711034 72711807 72711034 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72710718 72710945 72710718 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72710474 72710567 72710474 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72710165 72710371 72710165 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72709682 72709812 72709682 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72709493 72709542 72709493 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72709042 72709325 72709042 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72708772 72708875 72708772 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72707912 72708598 72707912 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72707581 72707748 72707581 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
chr3_4 CDS 72707280 72707402 72707280 ID=Msa0520230-mRNA-1:cds;Parent=Msa0520230-mRNA-1
Gene Sequence

>Msa0520230

ATGGAAAAAGAGTGTGTTGAGGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAGCTGACGTTGGAAAGCAGTTCAATATAGAAAAGCCAGGAAATGATCAAGATATGTTAGAAGAAGTATCAATCATAGATGAAGTTACAACTATAGCTGATTTCAAGCGTCTCATTGAGCTCACAAATTTCACAGAAAAAGGTTCTTCTCAGTTAGCCTACCTTATGAAACATTGGGAGTATAAGCAGGCGAGCGTGGCGCGTCTTCTAAGAGAAGAACTCGACAACCTAAACAAACAAAGACAGGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAACATAGATTTGAGGACGAAAGATACGGAGGCCATAAACGACCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAAGACGTGCCTTGCAGAAAAAGTAATGTTGTTGTACAAAACAAGAGAGTTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCACTTGGAAAAGTTGTTGGAGGCAAGTATTCAGAGAGAAGAGACACTTGAACAAAAGTTAAAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAAATTCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGAGGTATCGCTTTATCTATAACCACTTTCCAAGTTTACATGAGGAGGACATAATAGGAAAAACTGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGTGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTTAGAAAAAGAGAAAGGATGGCGAAAATTCGCGAAGAGATTGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATAACAGAGGAAACTATGAGAGCAAAGAAAGTGCTGGCAACAATGTCACACGAGATAAGATCTCCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGACAAGGAGCAAAGACAGCTGTTGGATGTCATGTTGTCATCTGGAGATTTGGTTCTTCAACTCATAAATGACATACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGACCTAGAGAGGTAGTAAAGCATGTCCTTCAGACAGCCGCAGCATCATTGCAGAAAATATTAACCATAGAAGGACATGTAGCAGATGATGTACCTATAGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAACCAGCAATGCCATCAAATTTACAAATGAAGGCAAAGTAGGGATAAACCTTTATGTTGTGCAAGAGCCAAGTTTTACAAAACCCGAAAGCGTACAAAAGATTAGTTCAGGCTATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAAATATGGAGTTAATGATGAGTGTAGATCTCCGGTTAAGAGTGAATGCTCGATGAACGGAGACACAGAGGATCAATATAACTCAAATGCAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAATACATAGTTTATTTAAAAGGTACATGCAAGTCAGTGTAGATCACGCTCGAAAGTATGGTGGGACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTCTAGCAAAGAACAAAATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAATTCTCAGACATGGAGCATAATGTTTCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCTCCCAATTTAGGCCATCTAGTCTCTTCCAGTGGAGCAAACAGAACTCACAACAAGTTATTGCCGCACAAATTTTGTGGATTTTCTGAGAGTTCATTCTCATTTCCCTCTACTTCCAATGACAACATATCAAAAGGAACATGTTCAGTTGATGATTCAAATTCATTGGTTGATGCTTCAGATATGTCTGAATCAGCTAGTTCATCTAGCCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCATATGGTGGTAAACTCAACTACTCAATGTGCTTCTAGCAATAGTAAATCAGAAGTAACCAAATCCATATCAAAGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACAGTTGGGTCATAACATAGATGTTGTCAATAATGGAGCAGAGGCGGTGCGTGCGGTTCAGCGCTGTACATATGACCTGGTTCTGATGGATGTGTGCATGCCAATTATGGATGGTCTTCAAGCAACAAAACTAATTCGGTCTTTCGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCCGGAATCGAGCAAAGTCTACCCAATCGAGATTATGAATATTGTGCTCCATCTACAAAGCGAATTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCTAATGGTATGGACTCATTTGTGTCAAAACCTGCGAGTTTACGAAAATTGAAAGAGTGTATTGAACAATACTTAAGGTGA
Protein sequence

>Msa0520230

MEKECVEDIMEIEVLPSMWPEDIGADVGKQFNIEKPGNDQDMLEEVSIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQASVARLLREELDNLNKQRQDVELRKLEILEEHRFEDERYGGHKRPVSILDDIYDIWQQDVPCRKSNVVVQNKRVEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEQKLKESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKKVLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTIEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTNEGKVGINLYVVQEPSFTKPESVQKISSGYSTISVNVVKEEKYGVNDECRSPVKSECSMNGDTEDQYNSNATTVWIGCDVYDTGIGIPENAIHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGRLTVSSKEQNGSTFTFILPYKVSIACDSSDYSDEFSDMEHNVSASDDTTTEGFFQFQPPNLGHLVSSSGANRTHNKLLPHKFCGFSESSFSFPSTSNDNISKGTCSVDDSNSLVDASDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCASSNSKSEVTKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPNRDYEYCAPSTKRIPIVAMTANALSESAEECFANGMDSFVSKPASLRKLKECIEQYLR*