AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431510 MtrunA17_Chr3g0136601 97.576 949 23 0 1 949 1 949 0.0 1921
Msa0431510 MtrunA17_Chr1g0150511 70.010 1017 226 17 1 948 5 1011 0.0 1372
Msa0431510 MtrunA17_Chr1g0150531 75.377 398 87 3 39 435 2 389 0.0 605
Msa0431510 MtrunA17_Chr3g0122391 28.268 612 375 14 373 949 443 1025 1.72e-50 193
Msa0431510 MtrunA17_Chr8g0377481 36.232 276 165 4 373 646 395 661 6.00e-39 157
Msa0431510 MtrunA17_Chr8g0377481 31.034 145 80 2 805 948 842 967 3.38e-15 80.5
Msa0431510 MtrunA17_Chr8g0392301 34.564 298 174 5 373 652 386 680 1.40e-35 146
Msa0431510 MtrunA17_Chr8g0392301 32.877 146 85 3 805 949 862 995 3.77e-17 87.0
Msa0431510 MtrunA17_Chr5g0447641 34.043 282 169 7 373 646 620 892 2.72e-35 145
Msa0431510 MtrunA17_Chr5g0447641 35.115 131 77 2 805 934 1075 1198 8.61e-15 79.3
Msa0431510 MtrunA17_Chr4g0013831 31.778 343 179 11 331 665 300 595 2.92e-34 140
Msa0431510 MtrunA17_Chr7g0269631 34.130 293 146 8 375 664 349 597 7.08e-33 135
Msa0431510 MtrunA17_Chr8g0371601 31.250 272 166 5 373 642 474 726 4.00e-27 119
Msa0431510 MtrunA17_Chr8g0371601 30.337 178 81 4 785 944 1010 1162 3.08e-13 74.3
Msa0431510 MtrunA17_Chr5g0405701 32.014 278 168 5 373 648 512 770 1.22e-25 114
Msa0431510 MtrunA17_Chr1g0197591 28.571 315 184 11 344 646 363 648 6.84e-19 92.4
Msa0431510 MtrunA17_Chr1g0194741 27.302 315 178 13 335 628 368 652 1.27e-13 75.1
Msa0431510 MtrunA17_Chr1g0190021 26.531 196 128 5 331 515 327 517 1.09e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431510 AT5G10720.1 58.264 968 333 14 1 948 5 921 0.0 1090
Msa0431510 AT1G27320.1 37.545 277 158 5 373 646 453 717 2.57e-40 162
Msa0431510 AT1G27320.1 30.345 145 93 2 805 948 891 1028 5.77e-15 80.1
Msa0431510 AT5G10680.2 46.429 168 83 4 1 168 1 161 1.59e-38 144
Msa0431510 AT5G10680.1 46.429 168 83 4 1 168 1 161 1.59e-38 144
Msa0431510 AT2G01830.2 35.192 287 166 6 373 646 475 754 1.69e-36 149
Msa0431510 AT2G01830.2 31.447 159 88 4 778 934 918 1057 1.82e-13 75.5
Msa0431510 AT2G01830.5 35.192 287 166 6 373 646 464 743 1.73e-36 149
Msa0431510 AT2G01830.5 31.447 159 88 4 778 934 907 1046 1.74e-13 75.5
Msa0431510 AT2G01830.1 35.192 287 166 6 373 646 452 731 1.93e-36 149
Msa0431510 AT2G01830.1 31.447 159 88 4 778 934 895 1034 1.64e-13 75.5
Msa0431510 AT2G01830.4 35.192 287 166 6 373 646 452 731 1.93e-36 149
Msa0431510 AT2G01830.4 31.447 159 88 4 778 934 895 1034 1.64e-13 75.5
Msa0431510 AT2G01830.6 35.192 287 166 6 373 646 452 731 1.93e-36 149
Msa0431510 AT2G01830.6 31.447 159 88 4 778 934 895 1034 1.64e-13 75.5
Msa0431510 AT2G01830.3 35.192 287 166 6 373 646 452 731 1.93e-36 149
Msa0431510 AT2G01830.3 31.447 159 88 4 778 934 895 1034 1.64e-13 75.5
Msa0431510 AT5G35750.1 36.879 282 160 8 373 646 590 861 1.20e-35 147
Msa0431510 AT5G35750.1 35.115 131 77 3 805 934 1036 1159 4.25e-13 74.3
Msa0431510 AT2G40940.1 32.110 327 173 9 330 648 298 583 1.35e-29 125
Msa0431510 AT2G17820.1 31.655 278 169 4 373 648 501 759 1.63e-27 121
Msa0431510 AT1G66340.1 27.628 333 186 7 331 655 299 584 2.13e-27 119
Msa0431510 AT2G47430.1 29.022 317 197 10 341 646 366 665 9.86e-23 105
Msa0431510 AT5G26594.1 33.099 142 61 4 802 940 16 126 1.99e-11 63.2

Find 163 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGCTCCTGTTGTTAT+TGG 0.154518 3_2:+83554756 Msa0431510:CDS
CTCACAAATTTCACAGAAAA+AGG 0.181280 3_2:+83554258 Msa0431510:CDS
ATATAGAAACCGGTCGTTTA+TGG 0.218811 3_2:-83554449 None:intergenic
CAATTCCAACCTCCCAATTT+AGG 0.220850 3_2:+83557460 Msa0431510:CDS
CAATACATAGTTTATTTAAA+AGG 0.226595 3_2:+83557009 Msa0431510:CDS
TAAACGACCGGTTTCTATAT+TGG 0.230609 3_2:+83554452 Msa0431510:CDS
GCTAAGGAAGTTGGAGATAT+TGG 0.232044 3_2:+83554392 Msa0431510:CDS
TGGATGATATTTATGATATA+TGG 0.239075 3_2:+83554472 Msa0431510:CDS
AGAGACTAGATGGCCTAAAT+TGG 0.246731 3_2:-83557473 None:intergenic
GCTTGAAGACCATCCATAAT+TGG 0.260574 3_2:-83558142 None:intergenic
GAGATAAGATCTCCACTTTC+TGG 0.266189 3_2:+83555547 Msa0431510:CDS
CAATAACAACAGGAGCATTT+TGG 0.278884 3_2:-83554755 None:intergenic
CATCCTGTCTTTGTTTGTTT+AGG 0.281414 3_2:-83554365 None:intergenic
GCCTTCATTTGTAAATTTGA+TGG 0.281976 3_2:-83556554 None:intergenic
AAACTTCCCTCTTAAAATCT+TGG 0.284644 3_2:-83554985 None:intergenic
AACATAGATGTTGTCAATAA+TGG 0.290513 3_2:+83557892 Msa0431510:CDS
TACCTCTCTAGGTCGAAATT+TGG 0.290931 3_2:-83556083 None:intergenic
TTTAGGCTTTGATATGGATT+TGG 0.311499 3_2:-83557800 None:intergenic
GGATGTGTGCATGCCAATTA+TGG 0.314902 3_2:+83558129 Msa0431510:intron
AACATATCTTGATCATTTCC+TGG 0.315890 3_2:-83554174 None:intergenic
GGGTAGACTTTGCTCGATTC+CGG 0.321938 3_2:-83558221 None:intergenic
CATGTTGTCATCTGGAGATT+TGG 0.337835 3_2:+83555639 Msa0431510:CDS
ATCTGCTACATGTCCTTCTA+TGG 0.343030 3_2:-83556155 None:intergenic
GATCTTTCCAAGGTTGAATC+AGG 0.345581 3_2:+83555688 Msa0431510:CDS
GTGAGTTCTGTTTGCTCCAC+TGG 0.347782 3_2:-83557497 None:intergenic
AAGAATCTGCAATACCATTC+TGG 0.355194 3_2:-83557714 None:intergenic
TTGGCTCTTGCACAACATAA+AGG 0.355853 3_2:-83556591 None:intergenic
AGTTGATGATTCAAATTCAT+TGG 0.362860 3_2:+83557615 Msa0431510:CDS
ATGGGAATTCGCTTTGTAGA+TGG 0.376345 3_2:-83558268 None:intergenic
AGAGTGTGTTGAGGATATTA+TGG 0.378342 3_2:+83554077 Msa0431510:CDS
TTTCACTACATTCACAGAAA+TGG 0.384669 3_2:-83556662 None:intergenic
GTAGATCACGCTCGAAAGTA+TGG 0.384965 3_2:+83557047 Msa0431510:CDS
CTTTCGAGGAAACAGGCAAT+TGG 0.386287 3_2:+83558182 Msa0431510:CDS
CATTCGTAATTGCAGGTCAT+TGG 0.389666 3_2:+83556317 Msa0431510:intron
CAGAAAATATTAACCATAGA+AGG 0.390045 3_2:+83556142 Msa0431510:CDS
AATAAAACCATTCACATAAC+AGG 0.395118 3_2:+83555379 Msa0431510:CDS
TGCAGATTCTTCTCAGCATA+TGG 0.396404 3_2:+83557726 Msa0431510:CDS
TTCAAGCAACAAAACTAATT+CGG 0.398524 3_2:+83558158 Msa0431510:CDS
AAATGTGTCATCACCTCTAT+AGG 0.404208 3_2:-83556184 None:intergenic
CTAAATTGGGAGGTTGGAAT+TGG 0.404734 3_2:-83557459 None:intergenic
CAATCAACCTGTTATGTGAA+TGG 0.404844 3_2:-83555386 None:intergenic
ATTCGGTCTTTCGAGGAAAC+AGG 0.407480 3_2:+83558175 Msa0431510:CDS
TCCTGTTGTTATTGGCCATC+AGG 0.408491 3_2:+83554764 Msa0431510:CDS
GCCATCAAATTTACAAATGA+AGG 0.414139 3_2:+83556553 Msa0431510:CDS
ACGTCAGCTCCAATATCTTC+TGG 0.420722 3_2:-83554126 None:intergenic
TTTACAAATGAAGGCAAAGT+AGG 0.421277 3_2:+83556562 Msa0431510:CDS
GTGTCTAGCAAAGAACAAAA+TGG 0.421334 3_2:+83557307 Msa0431510:CDS
TATACTCCCAATGTTTCATA+AGG 0.422050 3_2:-83554299 None:intergenic
TTCTGCATAGGTTGAGTTGA+TGG 0.425115 3_2:+83557270 Msa0431510:intron
TTGGATGTCATGTTGTCATC+TGG 0.426050 3_2:+83555631 Msa0431510:CDS
AGCAAGGCAGGTGAAACAAT+TGG 0.429476 3_2:+83555100 Msa0431510:CDS
ATCGAGCATTCACTCTTAAC+CGG 0.430609 3_2:-83556721 None:intergenic
CAAGCGATCGAGACCTTGTA+TGG 0.430770 3_2:-83557352 None:intergenic
TCACCTGCCTTGCTGAAGAC+AGG 0.433507 3_2:-83555091 None:intergenic
GCTCGAAAGTATGGTGGGAC+AGG 0.435553 3_2:+83557056 Msa0431510:CDS
ATATCTTCTGGCCACATTGA+AGG 0.436714 3_2:-83554114 None:intergenic
AGCGTACAAAAGATTAGTTC+AGG 0.440570 3_2:+83556631 Msa0431510:CDS
TCAATGTGGCCAGAAGATAT+TGG 0.443354 3_2:+83554117 Msa0431510:CDS
AAGTATGGTGGGACAGGGCT+AGG 0.445638 3_2:+83557062 Msa0431510:CDS
GGATGTTGAGCTAAGGAAGT+TGG 0.448739 3_2:+83554383 Msa0431510:CDS
ACTTTCTGGTGTTGTTAGCA+TGG 0.454583 3_2:+83555561 Msa0431510:CDS
ATTCACTGGATCTGGTGTTA+AGG 0.458619 3_2:+83554958 Msa0431510:CDS
TCCAATGACAACATATCAAA+AGG 0.462175 3_2:+83557583 Msa0431510:CDS
ATATCATCCAATATAGAAAC+CGG 0.463376 3_2:-83554459 None:intergenic
ATTACCTCCTCATGTAAACT+TGG 0.464486 3_2:-83554825 None:intergenic
TCCTGATGGCCAATAACAAC+AGG 0.466242 3_2:-83554765 None:intergenic
CTCCACTGGAAGAGACTAGA+TGG 0.466828 3_2:-83557483 None:intergenic
GGTTGTGATGTATATGATAC+AGG 0.469429 3_2:+83556796 Msa0431510:CDS
AAAACTAATTCGGTCTTTCG+AGG 0.469760 3_2:+83558168 Msa0431510:CDS
ACTAGCAATATGCAAACAAC+TGG 0.471382 3_2:+83557085 Msa0431510:CDS
TTTCGAGGAAACAGGCAATT+GGG 0.473287 3_2:+83558183 Msa0431510:CDS
AGCCTACCTTATGAAACATT+GGG 0.475348 3_2:+83554293 Msa0431510:CDS
ATTTGAGAGAGTTCTTCAAC+AGG 0.477140 3_2:-83554696 None:intergenic
GATGCACTTGGAAAAGTTGT+TGG 0.486450 3_2:+83554596 Msa0431510:CDS
GAGACTAGATGGCCTAAATT+GGG 0.487886 3_2:-83557472 None:intergenic
TCTTGTTATCTTCAACAAGA+AGG 0.489724 3_2:-83557825 None:intergenic
ACCTCAACTCTTTGTCCTGA+TGG 0.491700 3_2:-83554779 None:intergenic
GAACCTGTCTTCAGCAAGGC+AGG 0.495617 3_2:+83555088 Msa0431510:CDS
ATGACCCAACTGTTTCATCA+TGG 0.497053 3_2:-83557869 None:intergenic
CACATTCATACTTCCATACA+AGG 0.497367 3_2:+83557339 Msa0431510:CDS
TAGCCTACCTTATGAAACAT+TGG 0.501009 3_2:+83554292 Msa0431510:CDS
TTTCCAACCTGATTCAACCT+TGG 0.502835 3_2:-83555695 None:intergenic
GGGAATGGATGTAACAGATC+AGG 0.507588 3_2:+83555135 Msa0431510:CDS
ATAATATTCATAATCTCGAT+TGG 0.508357 3_2:-83558242 None:intergenic
CAAGGAGCAAAGACAGCTGT+TGG 0.510482 3_2:+83555612 Msa0431510:CDS
TGGAATCAATTACATGGGAA+TGG 0.513449 3_2:+83555120 Msa0431510:CDS
GTCGAAATATTCACTGGATC+TGG 0.516463 3_2:+83554950 Msa0431510:CDS
AGTATGATACTGTTGTGTAC+TGG 0.516963 3_2:+83554562 Msa0431510:CDS
GATGGCCTAAATTGGGAGGT+TGG 0.523038 3_2:-83557465 None:intergenic
AGTGTATTGAACAATACTTA+AGG 0.523347 3_2:+83558573 Msa0431510:CDS
AACAATTGGAATCAATTACA+TGG 0.523571 3_2:+83555114 Msa0431510:CDS
AGCAGATGATGTACCTATAG+AGG 0.523933 3_2:+83556171 Msa0431510:CDS
CAACCTAAACAAACAAAGAC+AGG 0.527200 3_2:+83554362 Msa0431510:CDS
ATTGGAAGAACATAGATTTG+AGG 0.528522 3_2:+83554410 Msa0431510:CDS
CTGTGTAGGAGTTATGAAGT+TGG 0.528994 3_2:+83556054 Msa0431510:intron
ATGCTAACAACACCAGAAAG+TGG 0.529641 3_2:-83555559 None:intergenic
TCTGCATAGGTTGAGTTGAT+GGG 0.531045 3_2:+83557271 Msa0431510:intron
CTTTCCAAGTTTACATGAGG+AGG 0.532167 3_2:+83554821 Msa0431510:CDS
ACTGATGTCGAAATATTCAC+TGG 0.534032 3_2:+83554944 Msa0431510:CDS
ACATGCTTTACTACCTCTCT+AGG 0.534889 3_2:-83556094 None:intergenic
GATGTATATGATACAGGCAT+TGG 0.535140 3_2:+83556802 Msa0431510:CDS
CTCAGATGAATTCTCAGACA+TGG 0.538037 3_2:+83557390 Msa0431510:CDS
CTAGTGCTTACCGCAACAAT+GGG 0.538212 3_2:-83558286 None:intergenic
TAATATTCATAATCTCGATT+GGG 0.540994 3_2:-83558241 None:intergenic
GGCCATCTAGTCTCTTCCAG+TGG 0.542757 3_2:+83557481 Msa0431510:CDS
ACAATCCATGATGAAACAGT+TGG 0.545179 3_2:+83557864 Msa0431510:CDS
TCTAGTGCTTACCGCAACAA+TGG 0.547183 3_2:-83558287 None:intergenic
TAATGATGAGTGTAGATCTC+CGG 0.548746 3_2:+83556702 Msa0431510:CDS
GAAACATTGGGAGTATAAGC+AGG 0.551772 3_2:+83554305 Msa0431510:CDS
TGGAGCAGAGGCGGTGCGTG+CGG 0.557895 3_2:+83557912 Msa0431510:CDS
TTACAAATGAAGGCAAAGTA+GGG 0.560913 3_2:+83556563 Msa0431510:CDS
TATGTTGTCATTGGAAGTAG+AGG 0.564452 3_2:-83557575 None:intergenic
TGACATACTTGATCTTTCCA+AGG 0.565536 3_2:+83555678 Msa0431510:CDS
TACATATGACCTGGTTCTGA+TGG 0.568683 3_2:+83557945 Msa0431510:CDS
GCACTTGGAAAAGTTGTTGG+AGG 0.568733 3_2:+83554599 Msa0431510:CDS
GAAACAGCGAGCGATGCACT+TGG 0.570341 3_2:+83554584 Msa0431510:CDS
CAATCCATGATGAAACAGTT+GGG 0.571813 3_2:+83557865 Msa0431510:CDS
AGATAACAAGATTAACATCA+TGG 0.572107 3_2:+83557837 Msa0431510:CDS
CATTATATAGATGATGTTTG+TGG 0.574874 3_2:-83557678 None:intergenic
TTCCACCACAAAACTTGACA+AGG 0.576173 3_2:+83555594 Msa0431510:CDS
TATGAGAGCAAAGAAAGTGC+TGG 0.576593 3_2:+83555510 Msa0431510:CDS
GGAGTATAAGCAGGCGAGCG+TGG 0.578452 3_2:+83554314 Msa0431510:CDS
ATGATGCTGCGGCTGTCTGA+AGG 0.579152 3_2:-83556117 None:intergenic
CCTCATGTAAACTTGGAAAG+TGG 0.579172 3_2:-83554818 None:intergenic
AGATTTGAGGACGAAAGATA+CGG 0.579302 3_2:+83554423 Msa0431510:CDS
ATCTATATAATGCTCATGCA+TGG 0.579361 3_2:+83557689 Msa0431510:CDS
TCTGATGATACAACAACAGA+AGG 0.580893 3_2:+83557430 Msa0431510:CDS
CCACTTTCCAAGTTTACATG+AGG 0.590769 3_2:+83554818 Msa0431510:CDS
AAAGACAGGATGTTGAGCTA+AGG 0.596277 3_2:+83554376 Msa0431510:CDS
CTCGAAAGTATGGTGGGACA+GGG 0.596487 3_2:+83557057 Msa0431510:CDS
TACCAAATTTCGACCTAGAG+AGG 0.598602 3_2:+83556081 Msa0431510:CDS
GCTCATGCATGGTTCCAGAA+TGG 0.599781 3_2:+83557700 Msa0431510:CDS
AAGAGTGAATGCTCGATGAA+CGG 0.601254 3_2:+83556727 Msa0431510:CDS
CAGTTCAATATAGAAAAGCC+AGG 0.602854 3_2:+83554156 Msa0431510:CDS
GAAGATATTGGAGCTGACGT+TGG 0.611663 3_2:+83554129 Msa0431510:CDS
GATACAGGCATTGGAATACC+AGG 0.612622 3_2:+83556811 Msa0431510:CDS
AAAGCGAATTCCCATTGTTG+CGG 0.612866 3_2:+83558276 Msa0431510:CDS
CTTCTGGCCACATTGAAGGA+AGG 0.613983 3_2:-83554110 None:intergenic
AATGCAACAACAGTGTGGAT+AGG 0.617754 3_2:+83556775 Msa0431510:CDS
ACAATTGGAATCAATTACAT+GGG 0.619533 3_2:+83555115 Msa0431510:CDS
ATCACGCTCGAAAGTATGGT+GGG 0.619892 3_2:+83557051 Msa0431510:CDS
CATAAATTACCATCAGAACC+AGG 0.627013 3_2:-83557954 None:intergenic
TGTAGAACCTGTCTTCAGCA+AGG 0.629088 3_2:+83555084 Msa0431510:CDS
GTGTGCATGCCAATTATGGA+TGG 0.635228 3_2:+83558133 Msa0431510:CDS
AAATTCTCACAAATTTAACC+AGG 0.643959 3_2:+83556360 Msa0431510:CDS
CTCCCAATGTTTCATAAGGT+AGG 0.643980 3_2:-83554295 None:intergenic
GCATAGGTTGAGTTGATGGG+AGG 0.644228 3_2:+83557274 Msa0431510:intron
TCAGCGCTGTACATATGACC+TGG 0.644473 3_2:+83557936 Msa0431510:CDS
ATACGGAGGCCATAAACGAC+CGG 0.646119 3_2:+83554440 Msa0431510:CDS
AGATTCTTCTCAGCATATGG+TGG 0.646433 3_2:+83557729 Msa0431510:CDS
GATTGCTGTTCAGAAAGCAA+AGG 0.648370 3_2:+83555345 Msa0431510:CDS
TGTCAATAATGGAGCAGAGG+CGG 0.649552 3_2:+83557903 Msa0431510:CDS
GAAAATCCACAAAATTTGTG+CGG 0.650564 3_2:-83557532 None:intergenic
ATGTTGTCATTGGAAGTAGA+GGG 0.650718 3_2:-83557574 None:intergenic
GATCACGCTCGAAAGTATGG+TGG 0.655464 3_2:+83557050 Msa0431510:CDS
GCCATCAGGACAAAGAGTTG+AGG 0.656169 3_2:+83554778 Msa0431510:CDS
TGTTGTCAATAATGGAGCAG+AGG 0.659976 3_2:+83557900 Msa0431510:CDS
TTGAAGTCCTTCCTTCAATG+TGG 0.668513 3_2:+83554103 Msa0431510:CDS
ACTAGATGGCCTAAATTGGG+AGG 0.678417 3_2:-83557469 None:intergenic
ACTCAAATGCAACAACAGTG+TGG 0.687455 3_2:+83556770 Msa0431510:CDS
CTCGATGAACGGAGACACAG+AGG 0.693267 3_2:+83556738 Msa0431510:CDS
GTATGGAAGTATGAATGTGA+AGG 0.713387 3_2:-83557335 None:intergenic
TTTGAGGACGAAAGATACGG+AGG 0.715280 3_2:+83554426 Msa0431510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTATTTTTTAAATTTT+TGG + chr3_2:83555245-83555264 Msa0431510:intron 10.0%
!! AATTATTTAAACTTATCTAT+TGG + chr3_2:83555759-83555778 Msa0431510:intron 10.0%
!!! TTTCTATTATATTTTGTTAT+AGG + chr3_2:83555894-83555913 Msa0431510:intron 10.0%
!!! TTCTATTATATTTTGTTATA+GGG + chr3_2:83555895-83555914 Msa0431510:intron 10.0%
!!! TTTTCTAATTAATATGTTAA+TGG - chr3_2:83558322-83558341 None:intergenic 10.0%
!!! AAAACTAATTAATTTGATAG+AGG - chr3_2:83555443-83555462 None:intergenic 15.0%
!! TTAAATAATTCAATCTAAAC+AGG - chr3_2:83555749-83555768 None:intergenic 15.0%
!! CAATACATAGTTTATTTAAA+AGG + chr3_2:83557009-83557028 Msa0431510:CDS 15.0%
!! TGGATGATATTTATGATATA+TGG + chr3_2:83554472-83554491 Msa0431510:CDS 20.0%
!! TAATATTCATAATCTCGATT+GGG - chr3_2:83558244-83558263 None:intergenic 20.0%
!! ATAATATTCATAATCTCGAT+TGG - chr3_2:83558245-83558264 None:intergenic 20.0%
! ATATCATCCAATATAGAAAC+CGG - chr3_2:83554462-83554481 None:intergenic 25.0%
!! ATTTTCTGTCATCTTTTTTC+AGG + chr3_2:83554907-83554926 Msa0431510:intron 25.0%
!!! ATCTTTTTTCAGGACATAAT+AGG + chr3_2:83554917-83554936 Msa0431510:intron 25.0%
! AACAATTGGAATCAATTACA+TGG + chr3_2:83555114-83555133 Msa0431510:CDS 25.0%
! ACAATTGGAATCAATTACAT+GGG + chr3_2:83555115-83555134 Msa0431510:CDS 25.0%
! ATGAATCTCTTGAAAAATGT+AGG + chr3_2:83555285-83555304 Msa0431510:intron 25.0%
! AATAAAACCATTCACATAAC+AGG + chr3_2:83555379-83555398 Msa0431510:CDS 25.0%
!! TTTCCTCATCTTTTTAATAG+AGG + chr3_2:83555483-83555502 Msa0431510:intron 25.0%
! TTTCCTCTATTAAAAAGATG+AGG - chr3_2:83555489-83555508 None:intergenic 25.0%
! CAGAAAATATTAACCATAGA+AGG + chr3_2:83556142-83556161 Msa0431510:CDS 25.0%
! AAATTCTCACAAATTTAACC+AGG + chr3_2:83556360-83556379 Msa0431510:CDS 25.0%
! TCACATAAAAATTTAGTACC+TGG - chr3_2:83556381-83556400 None:intergenic 25.0%
! GTAGTGAAAGAAGAAAAATA+TGG + chr3_2:83556676-83556695 Msa0431510:CDS 25.0%
! TAGTTATAGTAGATAATACC+TGG - chr3_2:83556832-83556851 None:intergenic 25.0%
! AAACAGAAGAATAGAGATTA+AGG - chr3_2:83556884-83556903 None:intergenic 25.0%
!! AATTTCTTGTGTAGAGTATT+TGG + chr3_2:83557110-83557129 Msa0431510:intron 25.0%
! ATAAAATGTAACTTCTGCAT+AGG + chr3_2:83557258-83557277 Msa0431510:intron 25.0%
!!! AGTTGATGATTCAAATTCAT+TGG + chr3_2:83557615-83557634 Msa0431510:CDS 25.0%
! CATTATATAGATGATGTTTG+TGG - chr3_2:83557681-83557700 None:intergenic 25.0%
! AGATAACAAGATTAACATCA+TGG + chr3_2:83557837-83557856 Msa0431510:CDS 25.0%
! AACATAGATGTTGTCAATAA+TGG + chr3_2:83557892-83557911 Msa0431510:CDS 25.0%
! AATATATCAATAAGCAGCAT+TGG - chr3_2:83558056-83558075 None:intergenic 25.0%
! TTCAAGCAACAAAACTAATT+CGG + chr3_2:83558158-83558177 Msa0431510:CDS 25.0%
! AGTGTATTGAACAATACTTA+AGG + chr3_2:83558573-83558592 Msa0431510:CDS 25.0%
AACATATCTTGATCATTTCC+TGG - chr3_2:83554177-83554196 None:intergenic 30.0%
CTCACAAATTTCACAGAAAA+AGG + chr3_2:83554258-83554277 Msa0431510:CDS 30.0%
TATACTCCCAATGTTTCATA+AGG - chr3_2:83554302-83554321 None:intergenic 30.0%
ATTGGAAGAACATAGATTTG+AGG + chr3_2:83554410-83554429 Msa0431510:CDS 30.0%
!!! ACAACATTACTTTTTCTGCA+AGG - chr3_2:83554510-83554529 None:intergenic 30.0%
AAACTTCCCTCTTAAAATCT+TGG - chr3_2:83554988-83555007 None:intergenic 30.0%
!! AGATTTTAAGAGGGAAGTTT+TGG + chr3_2:83554988-83555007 Msa0431510:CDS 30.0%
!!! ACTTTTGAGACAGAACTATT+TGG + chr3_2:83555040-83555059 Msa0431510:CDS 30.0%
! GCAAAAAAGTATATGTATCC+TGG - chr3_2:83555197-83555216 None:intergenic 30.0%
TGTAGGTTAGAAAAAGAGAA+AGG + chr3_2:83555302-83555321 Msa0431510:intron 30.0%
!! TCTAATATGGATTGGAAACA+AGG - chr3_2:83555726-83555745 None:intergenic 30.0%
TAAACAGGTCTAATATGGAT+TGG - chr3_2:83555734-83555753 None:intergenic 30.0%
CAATCTAAACAGGTCTAATA+TGG - chr3_2:83555739-83555758 None:intergenic 30.0%
!! ATAAGTTGTTTTCAGCGTAT+CGG + chr3_2:83555783-83555802 Msa0431510:intron 30.0%
AGCTATCTTAAAGACTTTAC+AGG - chr3_2:83555836-83555855 None:intergenic 30.0%
! ATCTAGTTTATGTATCACTG+AGG - chr3_2:83555995-83556014 None:intergenic 30.0%
!!! TTGGTGATGTTTTAAGGATT+CGG + chr3_2:83556336-83556355 Msa0431510:CDS 30.0%
GCCATCAAATTTACAAATGA+AGG + chr3_2:83556553-83556572 Msa0431510:CDS 30.0%
GCCTTCATTTGTAAATTTGA+TGG - chr3_2:83556557-83556576 None:intergenic 30.0%
TTTACAAATGAAGGCAAAGT+AGG + chr3_2:83556562-83556581 Msa0431510:CDS 30.0%
TTACAAATGAAGGCAAAGTA+GGG + chr3_2:83556563-83556582 Msa0431510:CDS 30.0%
! ACTAATCTTTTGTACGCTTT+CGG - chr3_2:83556629-83556648 None:intergenic 30.0%
TTTCACTACATTCACAGAAA+TGG - chr3_2:83556665-83556684 None:intergenic 30.0%
GAAAATCCACAAAATTTGTG+CGG - chr3_2:83557535-83557554 None:intergenic 30.0%
TCCAATGACAACATATCAAA+AGG + chr3_2:83557583-83557602 Msa0431510:CDS 30.0%
! TCCTTTTGATATGTTGTCAT+TGG - chr3_2:83557587-83557606 None:intergenic 30.0%
ATCTATATAATGCTCATGCA+TGG + chr3_2:83557689-83557708 Msa0431510:CDS 30.0%
! TTTAGGCTTTGATATGGATT+TGG - chr3_2:83557803-83557822 None:intergenic 30.0%
!! AAGGATTTTAGGCTTTGATA+TGG - chr3_2:83557809-83557828 None:intergenic 30.0%
! TCTTCAACAAGAAGGATTTT+AGG - chr3_2:83557820-83557839 None:intergenic 30.0%
! TCTTGTTATCTTCAACAAGA+AGG - chr3_2:83557828-83557847 None:intergenic 30.0%
AATTATTCGTAGAGAGAAAG+TGG - chr3_2:83558001-83558020 None:intergenic 30.0%
ATTTCATAGTTGCACTTTAC+AGG + chr3_2:83558108-83558127 Msa0431510:intron 30.0%
ATCCTTACTATGAATGTCTT+TGG + chr3_2:83558416-83558435 Msa0431510:intron 30.0%
TCCTTACTATGAATGTCTTT+GGG + chr3_2:83558417-83558436 Msa0431510:intron 30.0%
! AGAATGTTTTGCTAATGGTA+TGG + chr3_2:83558508-83558527 Msa0431510:CDS 30.0%
AGAGTGTGTTGAGGATATTA+TGG + chr3_2:83554077-83554096 Msa0431510:CDS 35.0%
CAGTTCAATATAGAAAAGCC+AGG + chr3_2:83554156-83554175 Msa0431510:CDS 35.0%
TAGCCTACCTTATGAAACAT+TGG + chr3_2:83554292-83554311 Msa0431510:CDS 35.0%
AGCCTACCTTATGAAACATT+GGG + chr3_2:83554293-83554312 Msa0431510:CDS 35.0%
CAACCTAAACAAACAAAGAC+AGG + chr3_2:83554362-83554381 Msa0431510:CDS 35.0%
! CATCCTGTCTTTGTTTGTTT+AGG - chr3_2:83554368-83554387 None:intergenic 35.0%
AGATTTGAGGACGAAAGATA+CGG + chr3_2:83554423-83554442 Msa0431510:CDS 35.0%
ATATAGAAACCGGTCGTTTA+TGG - chr3_2:83554452-83554471 None:intergenic 35.0%
! TAAACGACCGGTTTCTATAT+TGG + chr3_2:83554452-83554471 Msa0431510:CDS 35.0%
AGTATGATACTGTTGTGTAC+TGG + chr3_2:83554562-83554581 Msa0431510:CDS 35.0%
ATTTGAGAGAGTTCTTCAAC+AGG - chr3_2:83554699-83554718 None:intergenic 35.0%
!!! CAATAACAACAGGAGCATTT+TGG - chr3_2:83554758-83554777 None:intergenic 35.0%
CAAAATGCTCCTGTTGTTAT+TGG + chr3_2:83554756-83554775 Msa0431510:CDS 35.0%
ATTACCTCCTCATGTAAACT+TGG - chr3_2:83554828-83554847 None:intergenic 35.0%
TGTTGAAGCTCTTCTTGAAA+AGG + chr3_2:83554857-83554876 Msa0431510:intron 35.0%
ACTGATGTCGAAATATTCAC+TGG + chr3_2:83554944-83554963 Msa0431510:CDS 35.0%
! AGGAGAACCAAGATTTTAAG+AGG + chr3_2:83554978-83554997 Msa0431510:CDS 35.0%
!! GGAGAACCAAGATTTTAAGA+GGG + chr3_2:83554979-83554998 Msa0431510:CDS 35.0%
!!! AAGAGGGAAGTTTTGGAAAA+AGG + chr3_2:83554995-83555014 Msa0431510:CDS 35.0%
AAAAAGGATTGCCTGCAAAA+AGG + chr3_2:83555011-83555030 Msa0431510:CDS 35.0%
AAAAGGATTGCCTGCAAAAA+GGG + chr3_2:83555012-83555031 Msa0431510:CDS 35.0%
! AAAGTGATTTCCCTTTTTGC+AGG - chr3_2:83555025-83555044 None:intergenic 35.0%
TGGAATCAATTACATGGGAA+TGG + chr3_2:83555120-83555139 Msa0431510:CDS 35.0%
! GTTACTCCCTACGAAATTTT+TGG + chr3_2:83555170-83555189 Msa0431510:intron 35.0%
TTGCTTATATATCGTTCCAG+AGG + chr3_2:83555213-83555232 Msa0431510:intron 35.0%
TGCTTATATATCGTTCCAGA+GGG + chr3_2:83555214-83555233 Msa0431510:intron 35.0%
GGTTAGAAAAAGAGAAAGGA+TGG + chr3_2:83555306-83555325 Msa0431510:intron 35.0%
CAATCAACCTGTTATGTGAA+TGG - chr3_2:83555389-83555408 None:intergenic 35.0%
TGACATACTTGATCTTTCCA+AGG + chr3_2:83555678-83555697 Msa0431510:CDS 35.0%
! CTACACAGAATGCAGATTTT+GGG - chr3_2:83556042-83556061 None:intergenic 35.0%
! TATTTTCTGCAATGATGCTG+CGG - chr3_2:83556131-83556150 None:intergenic 35.0%
AAATGTGTCATCACCTCTAT+AGG - chr3_2:83556187-83556206 None:intergenic 35.0%
!!! AGGTCATTGGTGATGTTTTA+AGG + chr3_2:83556330-83556349 Msa0431510:intron 35.0%
TTTACACCTTCAGTGTGTAT+CGG + chr3_2:83556463-83556482 Msa0431510:intron 35.0%
!!! CTTTCGGGTTTTGTAAAACT+TGG - chr3_2:83556613-83556632 None:intergenic 35.0%
! CTAATCTTTTGTACGCTTTC+GGG - chr3_2:83556628-83556647 None:intergenic 35.0%
! AGCGTACAAAAGATTAGTTC+AGG + chr3_2:83556631-83556650 Msa0431510:CDS 35.0%
TAATGATGAGTGTAGATCTC+CGG + chr3_2:83556702-83556721 Msa0431510:CDS 35.0%
GGTTGTGATGTATATGATAC+AGG + chr3_2:83556796-83556815 Msa0431510:CDS 35.0%
GATGTATATGATACAGGCAT+TGG + chr3_2:83556802-83556821 Msa0431510:CDS 35.0%
ACTAGCAATATGCAAACAAC+TGG + chr3_2:83557085-83557104 Msa0431510:CDS 35.0%
! GTGTAGAGTATTTGGTTACA+TGG + chr3_2:83557118-83557137 Msa0431510:intron 35.0%
GTGTCTAGCAAAGAACAAAA+TGG + chr3_2:83557307-83557326 Msa0431510:CDS 35.0%
! GTATGGAAGTATGAATGTGA+AGG - chr3_2:83557338-83557357 None:intergenic 35.0%
CACATTCATACTTCCATACA+AGG + chr3_2:83557339-83557358 Msa0431510:CDS 35.0%
TCTGATGATACAACAACAGA+AGG + chr3_2:83557430-83557449 Msa0431510:CDS 35.0%
! TTATTGCCGCACAAATTTTG+TGG + chr3_2:83557526-83557545 Msa0431510:CDS 35.0%
ATGTTGTCATTGGAAGTAGA+GGG - chr3_2:83557577-83557596 None:intergenic 35.0%
TATGTTGTCATTGGAAGTAG+AGG - chr3_2:83557578-83557597 None:intergenic 35.0%
AAGAATCTGCAATACCATTC+TGG - chr3_2:83557717-83557736 None:intergenic 35.0%
ACAATCCATGATGAAACAGT+TGG + chr3_2:83557864-83557883 Msa0431510:CDS 35.0%
CAATCCATGATGAAACAGTT+GGG + chr3_2:83557865-83557884 Msa0431510:CDS 35.0%
CATAAATTACCATCAGAACC+AGG - chr3_2:83557957-83557976 None:intergenic 35.0%
!! CTGGTTCTGATGGTAATTTA+TGG + chr3_2:83557955-83557974 Msa0431510:intron 35.0%
AAAACTAATTCGGTCTTTCG+AGG + chr3_2:83558168-83558187 Msa0431510:CDS 35.0%
TCCCAAAGACATTCATAGTA+AGG - chr3_2:83558421-83558440 None:intergenic 35.0%
! GCTGAAGAATGTTTTGCTAA+TGG + chr3_2:83558503-83558522 Msa0431510:CDS 35.0%
! TTCAATTTTCGTAAACTCGC+AGG - chr3_2:83558551-83558570 None:intergenic 35.0%
TTGAAGTCCTTCCTTCAATG+TGG + chr3_2:83554103-83554122 Msa0431510:CDS 40.0%
ATATCTTCTGGCCACATTGA+AGG - chr3_2:83554117-83554136 None:intergenic 40.0%
TCAATGTGGCCAGAAGATAT+TGG + chr3_2:83554117-83554136 Msa0431510:CDS 40.0%
CTCCCAATGTTTCATAAGGT+AGG - chr3_2:83554298-83554317 None:intergenic 40.0%
! GAAACATTGGGAGTATAAGC+AGG + chr3_2:83554305-83554324 Msa0431510:CDS 40.0%
AAAGACAGGATGTTGAGCTA+AGG + chr3_2:83554376-83554395 Msa0431510:CDS 40.0%
GCTAAGGAAGTTGGAGATAT+TGG + chr3_2:83554392-83554411 Msa0431510:CDS 40.0%
GATGCACTTGGAAAAGTTGT+TGG + chr3_2:83554596-83554615 Msa0431510:CDS 40.0%
CCTCATGTAAACTTGGAAAG+TGG - chr3_2:83554821-83554840 None:intergenic 40.0%
CCACTTTCCAAGTTTACATG+AGG + chr3_2:83554818-83554837 Msa0431510:CDS 40.0%
CTTTCCAAGTTTACATGAGG+AGG + chr3_2:83554821-83554840 Msa0431510:CDS 40.0%
GTCGAAATATTCACTGGATC+TGG + chr3_2:83554950-83554969 Msa0431510:CDS 40.0%
! ATTCACTGGATCTGGTGTTA+AGG + chr3_2:83554958-83554977 Msa0431510:CDS 40.0%
CCTGGTCCAAAAATTTCGTA+GGG - chr3_2:83555179-83555198 None:intergenic 40.0%
TCCTGGTCCAAAAATTTCGT+AGG - chr3_2:83555180-83555199 None:intergenic 40.0%
TAAGAAGTCAATACTCCCTC+TGG - chr3_2:83555232-83555251 None:intergenic 40.0%
! GATTGCTGTTCAGAAAGCAA+AGG + chr3_2:83555345-83555364 Msa0431510:CDS 40.0%
! TATGAGAGCAAAGAAAGTGC+TGG + chr3_2:83555510-83555529 Msa0431510:CDS 40.0%
GAGATAAGATCTCCACTTTC+TGG + chr3_2:83555547-83555566 Msa0431510:CDS 40.0%
ATGCTAACAACACCAGAAAG+TGG - chr3_2:83555562-83555581 None:intergenic 40.0%
!! ACTTTCTGGTGTTGTTAGCA+TGG + chr3_2:83555561-83555580 Msa0431510:CDS 40.0%
TTCCACCACAAAACTTGACA+AGG + chr3_2:83555594-83555613 Msa0431510:CDS 40.0%
! TTGCTCCTTGTCAAGTTTTG+TGG - chr3_2:83555602-83555621 None:intergenic 40.0%
TTGGATGTCATGTTGTCATC+TGG + chr3_2:83555631-83555650 Msa0431510:CDS 40.0%
CATGTTGTCATCTGGAGATT+TGG + chr3_2:83555639-83555658 Msa0431510:CDS 40.0%
GATCTTTCCAAGGTTGAATC+AGG + chr3_2:83555688-83555707 Msa0431510:CDS 40.0%
TTTCCAAGGTTGAATCAGGT+TGG + chr3_2:83555692-83555711 Msa0431510:intron 40.0%
TTTCCAACCTGATTCAACCT+TGG - chr3_2:83555698-83555717 None:intergenic 40.0%
! CCTACACAGAATGCAGATTT+TGG - chr3_2:83556043-83556062 None:intergenic 40.0%
CCAAAATCTGCATTCTGTGT+AGG + chr3_2:83556040-83556059 Msa0431510:intron 40.0%
CTGTGTAGGAGTTATGAAGT+TGG + chr3_2:83556054-83556073 Msa0431510:intron 40.0%
TACCAAATTTCGACCTAGAG+AGG + chr3_2:83556081-83556100 Msa0431510:CDS 40.0%
TACCTCTCTAGGTCGAAATT+TGG - chr3_2:83556086-83556105 None:intergenic 40.0%
ACATGCTTTACTACCTCTCT+AGG - chr3_2:83556097-83556116 None:intergenic 40.0%
ATCTGCTACATGTCCTTCTA+TGG - chr3_2:83556158-83556177 None:intergenic 40.0%
AGCAGATGATGTACCTATAG+AGG + chr3_2:83556171-83556190 Msa0431510:CDS 40.0%
TCATGTCCATCTAGTACACA+TGG - chr3_2:83556235-83556254 None:intergenic 40.0%
TCTGCTTCATTCGTAATTGC+AGG + chr3_2:83556310-83556329 Msa0431510:intron 40.0%
CATTCGTAATTGCAGGTCAT+TGG + chr3_2:83556317-83556336 Msa0431510:intron 40.0%
ACTTAACCGATACACACTGA+AGG - chr3_2:83556472-83556491 None:intergenic 40.0%
! TTGGCTCTTGCACAACATAA+AGG - chr3_2:83556594-83556613 None:intergenic 40.0%
ATCGAGCATTCACTCTTAAC+CGG - chr3_2:83556724-83556743 None:intergenic 40.0%
AAGAGTGAATGCTCGATGAA+CGG + chr3_2:83556727-83556746 Msa0431510:CDS 40.0%
ACTCAAATGCAACAACAGTG+TGG + chr3_2:83556770-83556789 Msa0431510:CDS 40.0%
AATGCAACAACAGTGTGGAT+AGG + chr3_2:83556775-83556794 Msa0431510:CDS 40.0%
!! TTCTGCATAGGTTGAGTTGA+TGG + chr3_2:83557270-83557289 Msa0431510:intron 40.0%
!! TCTGCATAGGTTGAGTTGAT+GGG + chr3_2:83557271-83557290 Msa0431510:intron 40.0%
CTCAGATGAATTCTCAGACA+TGG + chr3_2:83557390-83557409 Msa0431510:CDS 40.0%
CTAAATTGGGAGGTTGGAAT+TGG - chr3_2:83557462-83557481 None:intergenic 40.0%
CAATTCCAACCTCCCAATTT+AGG + chr3_2:83557460-83557479 Msa0431510:CDS 40.0%
GAGACTAGATGGCCTAAATT+GGG - chr3_2:83557475-83557494 None:intergenic 40.0%
AGAGACTAGATGGCCTAAAT+TGG - chr3_2:83557476-83557495 None:intergenic 40.0%
TGCAGATTCTTCTCAGCATA+TGG + chr3_2:83557726-83557745 Msa0431510:CDS 40.0%
AGATTCTTCTCAGCATATGG+TGG + chr3_2:83557729-83557748 Msa0431510:CDS 40.0%
ATGACCCAACTGTTTCATCA+TGG - chr3_2:83557872-83557891 None:intergenic 40.0%
! TGTTGTCAATAATGGAGCAG+AGG + chr3_2:83557900-83557919 Msa0431510:CDS 40.0%
!! TACATATGACCTGGTTCTGA+TGG + chr3_2:83557945-83557964 Msa0431510:CDS 40.0%
GCTTGAAGACCATCCATAAT+TGG - chr3_2:83558145-83558164 None:intergenic 40.0%
TTTCGAGGAAACAGGCAATT+GGG + chr3_2:83558183-83558202 Msa0431510:CDS 40.0%
ATGGGAATTCGCTTTGTAGA+TGG - chr3_2:83558271-83558290 None:intergenic 40.0%
AAAGCGAATTCCCATTGTTG+CGG + chr3_2:83558276-83558295 Msa0431510:CDS 40.0%
ACGTCAGCTCCAATATCTTC+TGG - chr3_2:83554129-83554148 None:intergenic 45.0%
GAAGATATTGGAGCTGACGT+TGG + chr3_2:83554129-83554148 Msa0431510:CDS 45.0%
GGATGTTGAGCTAAGGAAGT+TGG + chr3_2:83554383-83554402 Msa0431510:CDS 45.0%
TTTGAGGACGAAAGATACGG+AGG + chr3_2:83554426-83554445 Msa0431510:CDS 45.0%
GCACTTGGAAAAGTTGTTGG+AGG + chr3_2:83554599-83554618 Msa0431510:CDS 45.0%
! TCCTGTTGTTATTGGCCATC+AGG + chr3_2:83554764-83554783 Msa0431510:CDS 45.0%
TCCTGATGGCCAATAACAAC+AGG - chr3_2:83554768-83554787 None:intergenic 45.0%
ACCTCAACTCTTTGTCCTGA+TGG - chr3_2:83554782-83554801 None:intergenic 45.0%
TGTAGAACCTGTCTTCAGCA+AGG + chr3_2:83555084-83555103 Msa0431510:CDS 45.0%
AGCAAGGCAGGTGAAACAAT+TGG + chr3_2:83555100-83555119 Msa0431510:CDS 45.0%
GGGAATGGATGTAACAGATC+AGG + chr3_2:83555135-83555154 Msa0431510:CDS 45.0%
!! CCCTACGAAATTTTTGGACC+AGG + chr3_2:83555176-83555195 Msa0431510:intron 45.0%
!! CTCCTTGTCAAGTTTTGTGG+TGG - chr3_2:83555599-83555618 None:intergenic 45.0%
!! GAATGCAGATTTTGGGAGGT+AGG - chr3_2:83556035-83556054 None:intergenic 45.0%
! CACAGAATGCAGATTTTGGG+AGG - chr3_2:83556039-83556058 None:intergenic 45.0%
GTGTTGCCATGTGTACTAGA+TGG + chr3_2:83556226-83556245 Msa0431510:intron 45.0%
!! GATACAGGCATTGGAATACC+AGG + chr3_2:83556811-83556830 Msa0431510:CDS 45.0%
GTAGATCACGCTCGAAAGTA+TGG + chr3_2:83557047-83557066 Msa0431510:CDS 45.0%
! ATCACGCTCGAAAGTATGGT+GGG + chr3_2:83557051-83557070 Msa0431510:CDS 45.0%
ACTAGATGGCCTAAATTGGG+AGG - chr3_2:83557472-83557491 None:intergenic 45.0%
! TGTCAATAATGGAGCAGAGG+CGG + chr3_2:83557903-83557922 Msa0431510:CDS 45.0%
GGATGTGTGCATGCCAATTA+TGG + chr3_2:83558129-83558148 Msa0431510:intron 45.0%
GTGTGCATGCCAATTATGGA+TGG + chr3_2:83558133-83558152 Msa0431510:CDS 45.0%
ATTCGGTCTTTCGAGGAAAC+AGG + chr3_2:83558175-83558194 Msa0431510:CDS 45.0%
CTTTCGAGGAAACAGGCAAT+TGG + chr3_2:83558182-83558201 Msa0431510:CDS 45.0%
TGGGATGCTGCAAAAAATGC+CGG + chr3_2:83558202-83558221 Msa0431510:CDS 45.0%
CTAGTGCTTACCGCAACAAT+GGG - chr3_2:83558289-83558308 None:intergenic 45.0%
TCTAGTGCTTACCGCAACAA+TGG - chr3_2:83558290-83558309 None:intergenic 45.0%
CTTCTGGCCACATTGAAGGA+AGG - chr3_2:83554113-83554132 None:intergenic 50.0%
ATACGGAGGCCATAAACGAC+CGG + chr3_2:83554440-83554459 Msa0431510:CDS 50.0%
GCCATCAGGACAAAGAGTTG+AGG + chr3_2:83554778-83554797 Msa0431510:CDS 50.0%
CAAGGAGCAAAGACAGCTGT+TGG + chr3_2:83555612-83555631 Msa0431510:CDS 50.0%
! GATCACGCTCGAAAGTATGG+TGG + chr3_2:83557050-83557069 Msa0431510:CDS 50.0%
! CTCGAAAGTATGGTGGGACA+GGG + chr3_2:83557057-83557076 Msa0431510:CDS 50.0%
!! GCATAGGTTGAGTTGATGGG+AGG + chr3_2:83557274-83557293 Msa0431510:intron 50.0%
CAAGCGATCGAGACCTTGTA+TGG - chr3_2:83557355-83557374 None:intergenic 50.0%
GATGGCCTAAATTGGGAGGT+TGG - chr3_2:83557468-83557487 None:intergenic 50.0%
CTCCACTGGAAGAGACTAGA+TGG - chr3_2:83557486-83557505 None:intergenic 50.0%
GTGAGTTCTGTTTGCTCCAC+TGG - chr3_2:83557500-83557519 None:intergenic 50.0%
GCTCATGCATGGTTCCAGAA+TGG + chr3_2:83557700-83557719 Msa0431510:CDS 50.0%
TCAGCGCTGTACATATGACC+TGG + chr3_2:83557936-83557955 Msa0431510:CDS 50.0%
GGGTAGACTTTGCTCGATTC+CGG - chr3_2:83558224-83558243 None:intergenic 50.0%
GAAACAGCGAGCGATGCACT+TGG + chr3_2:83554584-83554603 Msa0431510:CDS 55.0%
GAACCTGTCTTCAGCAAGGC+AGG + chr3_2:83555088-83555107 Msa0431510:CDS 55.0%
TCACCTGCCTTGCTGAAGAC+AGG - chr3_2:83555094-83555113 None:intergenic 55.0%
ATGATGCTGCGGCTGTCTGA+AGG - chr3_2:83556120-83556139 None:intergenic 55.0%
CTCGATGAACGGAGACACAG+AGG + chr3_2:83556738-83556757 Msa0431510:CDS 55.0%
! GCTCGAAAGTATGGTGGGAC+AGG + chr3_2:83557056-83557075 Msa0431510:CDS 55.0%
! AAGTATGGTGGGACAGGGCT+AGG + chr3_2:83557062-83557081 Msa0431510:CDS 55.0%
GGCCATCTAGTCTCTTCCAG+TGG + chr3_2:83557481-83557500 Msa0431510:CDS 55.0%
GGAGTATAAGCAGGCGAGCG+TGG + chr3_2:83554314-83554333 Msa0431510:CDS 60.0%
TGGAGCAGAGGCGGTGCGTG+CGG + chr3_2:83557912-83557931 Msa0431510:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83554069 83558598 83554069 ID=Msa0431510;Name=Msa0431510
chr3_2 mRNA 83554069 83558598 83554069 ID=Msa0431510-mRNA-1;Parent=Msa0431510;Name=Msa0431510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|11|0|949
chr3_2 exon 83554069 83554842 83554069 ID=Msa0431510-mRNA-1:exon:23360;Parent=Msa0431510-mRNA-1
chr3_2 exon 83554929 83555156 83554929 ID=Msa0431510-mRNA-1:exon:23361;Parent=Msa0431510-mRNA-1
chr3_2 exon 83555307 83555400 83555307 ID=Msa0431510-mRNA-1:exon:23362;Parent=Msa0431510-mRNA-1
chr3_2 exon 83555503 83555709 83555503 ID=Msa0431510-mRNA-1:exon:23363;Parent=Msa0431510-mRNA-1
chr3_2 exon 83556062 83556192 83556062 ID=Msa0431510-mRNA-1:exon:23364;Parent=Msa0431510-mRNA-1
chr3_2 exon 83556332 83556381 83556332 ID=Msa0431510-mRNA-1:exon:23365;Parent=Msa0431510-mRNA-1
chr3_2 exon 83556549 83556832 83556549 ID=Msa0431510-mRNA-1:exon:23366;Parent=Msa0431510-mRNA-1
chr3_2 exon 83557003 83557106 83557003 ID=Msa0431510-mRNA-1:exon:23367;Parent=Msa0431510-mRNA-1
chr3_2 exon 83557280 83557966 83557280 ID=Msa0431510-mRNA-1:exon:23368;Parent=Msa0431510-mRNA-1
chr3_2 exon 83558130 83558297 83558130 ID=Msa0431510-mRNA-1:exon:23369;Parent=Msa0431510-mRNA-1
chr3_2 exon 83558476 83558598 83558476 ID=Msa0431510-mRNA-1:exon:23370;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83554069 83554842 83554069 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83554929 83555156 83554929 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83555307 83555400 83555307 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83555503 83555709 83555503 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83556062 83556192 83556062 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83556332 83556381 83556332 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83556549 83556832 83556549 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83557003 83557106 83557003 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83557280 83557966 83557280 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83558130 83558297 83558130 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
chr3_2 CDS 83558476 83558598 83558476 ID=Msa0431510-mRNA-1:cds;Parent=Msa0431510-mRNA-1
Gene Sequence

>Msa0431510

ATGGAAAAAGAGTGTGTTGAGGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAGCTGACGTTGGAAAGCAGTTCAATATAGAAAAGCCAGGAAATGATCAAGATATGTTAGAAGAAGTATCAATCATAGATGAAGTTACAACTATAGCTGATTTCAAGCGTCTCATTGAGCTCACAAATTTCACAGAAAAAGGTTCTTCTCAGTTAGCCTACCTTATGAAACATTGGGAGTATAAGCAGGCGAGCGTGGCGCGTCTTCTAAGAGAAGAACTCGACAACCTAAACAAACAAAGACAGGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAACATAGATTTGAGGACGAAAGATACGGAGGCCATAAACGACCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAAGACGTGCCTTGCAGAAAAAGTAATGTTGTTGTACAAAACAAGAGAGTTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCACTTGGAAAAGTTGTTGGAGGCAAGTATTCAGAGAGAAGAGACACTTGAACAAAAGTTAAAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAAATTCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGAGGTATCGCTTTATCTATAACCACTTTCCAAGTTTACATGAGGAGGACATAATAGGAAAAACTGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGTGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTTAGAAAAAGAGAAAGGATGGCGAAAATTCGCGAAGAGATTGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATAACAGAGGAAACTATGAGAGCAAAGAAAGTGCTGGCAACAATGTCACACGAGATAAGATCTCCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGACAAGGAGCAAAGACAGCTGTTGGATGTCATGTTGTCATCTGGAGATTTGGTTCTTCAACTCATAAATGACATACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGACCTAGAGAGGTAGTAAAGCATGTCCTTCAGACAGCCGCAGCATCATTGCAGAAAATATTAACCATAGAAGGACATGTAGCAGATGATGTACCTATAGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAACCAGCAATGCCATCAAATTTACAAATGAAGGCAAAGTAGGGATAAACCTTTATGTTGTGCAAGAGCCAAGTTTTACAAAACCCGAAAGCGTACAAAAGATTAGTTCAGGCTATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAAATATGGAGTTAATGATGAGTGTAGATCTCCGGTTAAGAGTGAATGCTCGATGAACGGAGACACAGAGGATCAATATAACTCAAATGCAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAATACATAGTTTATTTAAAAGGTACATGCAAGTCAGTGTAGATCACGCTCGAAAGTATGGTGGGACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTCTAGCAAAGAACAAAATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAATTCTCAGACATGGAGCATAATGTTTCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCTCCCAATTTAGGCCATCTAGTCTCTTCCAGTGGAGCAAACAGAACTCACAACAAGTTATTGCCGCACAAATTTTGTGGATTTTCTGAGAGTTCATTCTCATTTCCCTCTACTTCCAATGACAACATATCAAAAGGAACATGTTCAGTTGATGATTCAAATTCATTGGTTGATGCTTCAGATATGTCTGAATCAGCTAGTTCATCTAGCCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCATATGGTGGTAAACTCAACTACTCAATGTGCTTCTAGCAATAGTAAATCAGAAGCAACCAAATCCATATCAAAGCCTAAAATCCTTCTTGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACAGTTGGGTCATAACATAGATGTTGTCAATAATGGAGCAGAGGCGGTGCGTGCGGTTCAGCGCTGTACATATGACCTGGTTCTGATGGATGTGTGCATGCCAATTATGGATGGTCTTCAAGCAACAAAACTAATTCGGTCTTTCGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCCGGAATCGAGCAAAGTCTACCCAATCGAGATTATGAATATTATGCTCCATCTACAAAGCGAATTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCTAATGGTATGGACTCATTTGTGTCAAAACCTGCGAGTTTACGAAAATTGAAAGAGTGTATTGAACAATACTTAAGGTGA
Protein sequence

>Msa0431510

MEKECVEDIMEIEVLPSMWPEDIGADVGKQFNIEKPGNDQDMLEEVSIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQASVARLLREELDNLNKQRQDVELRKLEILEEHRFEDERYGGHKRPVSILDDIYDIWQQDVPCRKSNVVVQNKRVEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEQKLKESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKKVLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTIEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTNEGKVGINLYVVQEPSFTKPESVQKISSGYSTISVNVVKEEKYGVNDECRSPVKSECSMNGDTEDQYNSNATTVWIGCDVYDTGIGIPENAIHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGRLTVSSKEQNGSTFTFILPYKVSIACDSSDYSDEFSDMEHNVSASDDTTTEGFFQFQPPNLGHLVSSSGANRTHNKLLPHKFCGFSESSFSFPSTSNDNISKGTCSVDDSNSLVDASDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCASSNSKSEATKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPNRDYEYYAPSTKRIPIVAMTANALSESAEECFANGMDSFVSKPASLRKLKECIEQYLR*