AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431820 MtrunA17_Chr3g0136601 97.682 949 22 0 1 949 1 949 0.0 1922
Msa0431820 MtrunA17_Chr1g0150511 70.108 1017 225 17 1 948 5 1011 0.0 1375
Msa0431820 MtrunA17_Chr1g0150531 75.377 398 87 3 39 435 2 389 0.0 605
Msa0431820 MtrunA17_Chr8g0377481 36.232 276 165 4 373 646 395 661 6.32e-39 156
Msa0431820 MtrunA17_Chr8g0377481 31.034 145 80 2 805 948 842 967 3.53e-15 80.5
Msa0431820 MtrunA17_Chr3g0122391 35.395 291 177 5 373 660 443 725 6.54e-38 153
Msa0431820 MtrunA17_Chr3g0122391 31.333 150 82 3 801 949 896 1025 1.44e-14 78.6
Msa0431820 MtrunA17_Chr8g0392301 34.564 298 174 5 373 652 386 680 1.37e-35 146
Msa0431820 MtrunA17_Chr8g0392301 31.447 159 96 3 792 949 849 995 2.87e-17 87.4
Msa0431820 MtrunA17_Chr5g0447641 34.043 282 169 7 373 646 620 892 2.58e-35 145
Msa0431820 MtrunA17_Chr5g0447641 35.115 131 77 2 805 934 1075 1198 8.61e-15 79.3
Msa0431820 MtrunA17_Chr4g0013831 31.778 343 179 11 331 665 300 595 2.65e-34 141
Msa0431820 MtrunA17_Chr7g0269631 34.130 293 146 8 375 664 349 597 6.65e-33 135
Msa0431820 MtrunA17_Chr8g0371601 31.250 272 166 5 373 642 474 726 5.30e-27 119
Msa0431820 MtrunA17_Chr8g0371601 29.775 178 82 3 785 944 1010 1162 9.37e-13 72.8
Msa0431820 MtrunA17_Chr5g0405701 32.014 278 168 5 373 648 512 770 1.51e-25 114
Msa0431820 MtrunA17_Chr1g0197591 28.571 315 184 11 344 646 363 648 6.44e-19 92.8
Msa0431820 MtrunA17_Chr1g0194741 27.302 315 178 13 335 628 368 652 1.37e-13 75.1
Msa0431820 MtrunA17_Chr1g0190021 26.531 196 128 5 331 515 327 517 9.95e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431820 AT5G10720.1 58.471 968 331 15 1 948 5 921 0.0 1094
Msa0431820 AT1G27320.1 37.545 277 158 5 373 646 453 717 2.57e-40 162
Msa0431820 AT1G27320.1 30.345 145 93 2 805 948 891 1028 6.02e-15 80.1
Msa0431820 AT5G10680.2 46.429 168 83 4 1 168 1 161 1.48e-38 144
Msa0431820 AT5G10680.1 46.429 168 83 4 1 168 1 161 1.48e-38 144
Msa0431820 AT2G01830.2 35.192 287 166 6 373 646 475 754 1.75e-36 149
Msa0431820 AT2G01830.2 31.544 149 82 3 787 934 928 1057 1.73e-13 75.5
Msa0431820 AT2G01830.5 35.192 287 166 6 373 646 464 743 1.87e-36 149
Msa0431820 AT2G01830.5 31.544 149 82 3 787 934 917 1046 1.89e-13 75.5
Msa0431820 AT2G01830.1 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0431820 AT2G01830.1 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0431820 AT2G01830.4 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0431820 AT2G01830.4 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0431820 AT2G01830.6 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0431820 AT2G01830.6 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0431820 AT2G01830.3 35.192 287 166 6 373 646 452 731 2.15e-36 149
Msa0431820 AT2G01830.3 31.544 149 82 3 787 934 905 1034 1.74e-13 75.5
Msa0431820 AT5G35750.1 36.879 282 160 8 373 646 590 861 1.16e-35 147
Msa0431820 AT5G35750.1 35.878 131 76 3 805 934 1036 1159 1.99e-14 78.6
Msa0431820 AT2G40940.1 32.110 327 173 9 330 648 298 583 1.33e-29 125
Msa0431820 AT2G17820.1 31.655 278 169 4 373 648 501 759 1.76e-27 120
Msa0431820 AT1G66340.1 27.628 333 186 7 331 655 299 584 2.15e-27 119
Msa0431820 AT2G47430.1 29.022 317 197 10 341 646 366 665 1.00e-22 105
Msa0431820 AT5G26594.1 33.099 142 61 4 802 940 16 126 2.03e-11 63.2

Find 161 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGCTCCTGTTGTTAT+TGG 0.154518 3_2:+83892036 Msa0431820:CDS
CTCACAAATTTCACAGAAAA+AGG 0.181280 3_2:+83891538 Msa0431820:CDS
ATATAGAAACCGGTCGTTTA+TGG 0.218811 3_2:-83891729 None:intergenic
CAATTCCAACCTCCCAATTT+AGG 0.220850 3_2:+83894737 Msa0431820:CDS
CAATACATAGTTTATTTAAA+AGG 0.226595 3_2:+83894286 Msa0431820:CDS
TAAACGACCGGTTTCTATAT+TGG 0.230609 3_2:+83891732 Msa0431820:CDS
GCTAAGGAAGTTGGAGATAT+TGG 0.232044 3_2:+83891672 Msa0431820:CDS
TGGATGATATTTATGATATA+TGG 0.239075 3_2:+83891752 Msa0431820:CDS
AGAGACTAGATGGCCTAAAT+TGG 0.246731 3_2:-83894750 None:intergenic
GCTTGAAGACCATCCATAAT+TGG 0.260574 3_2:-83895419 None:intergenic
GAGATAAGATCTCCACTTTC+TGG 0.266189 3_2:+83892827 Msa0431820:CDS
CAATAACAACAGGAGCATTT+TGG 0.278884 3_2:-83892035 None:intergenic
CATCCTGTCTTTGTTTGTTT+AGG 0.281414 3_2:-83891645 None:intergenic
GCCTTCATTTGTAAATTTGA+TGG 0.281976 3_2:-83893834 None:intergenic
AAACTTCCCTCTTAAAATCT+TGG 0.284644 3_2:-83892265 None:intergenic
AACATAGATGTTGTCAATAA+TGG 0.290513 3_2:+83895169 Msa0431820:CDS
TACCTCTCTAGGTCGAAATT+TGG 0.290931 3_2:-83893363 None:intergenic
CTTAGGCTTTGATATGGATT+TGG 0.306792 3_2:-83895077 None:intergenic
GGATGTGTGCATGCCAATTA+TGG 0.314902 3_2:+83895406 Msa0431820:intron
AACATATCTTGATCATTTCC+TGG 0.315890 3_2:-83891454 None:intergenic
GGGTAGACTTTGCTCGATTC+CGG 0.321938 3_2:-83895498 None:intergenic
AAGGATCTTAGGCTTTGATA+TGG 0.321955 3_2:-83895083 None:intergenic
CATGTTGTCATCTGGAGATT+TGG 0.337835 3_2:+83892919 Msa0431820:CDS
ATCTGCTACATGTCCTTCTA+TGG 0.343030 3_2:-83893435 None:intergenic
GATCTTTCCAAGGTTGAATC+AGG 0.345581 3_2:+83892968 Msa0431820:CDS
GTGAGTTCTGTTTGCTCCAC+TGG 0.347782 3_2:-83894774 None:intergenic
AAGAATCTGCAATACCATTC+TGG 0.355194 3_2:-83894991 None:intergenic
TTGGCTCTTGCACAACATAA+AGG 0.355853 3_2:-83893871 None:intergenic
AGTTGATGATTCAAATTCAT+TGG 0.362860 3_2:+83894892 Msa0431820:CDS
ATGGGAATTCGCTTTGTAGA+TGG 0.376345 3_2:-83895545 None:intergenic
AGAGTGTGTTGAGGATATTA+TGG 0.378342 3_2:+83891357 Msa0431820:CDS
TTTCACTACATTCACAGAAA+TGG 0.384669 3_2:-83893942 None:intergenic
GTAGATCACGCTCGAAAGTA+TGG 0.384965 3_2:+83894324 Msa0431820:CDS
CATTCGTAATTGCAGGTCAT+TGG 0.389666 3_2:+83893597 Msa0431820:intron
CAGAAAATATTAACCATAGA+AGG 0.390045 3_2:+83893422 Msa0431820:CDS
AATAAAACCATTCACATAAC+AGG 0.395118 3_2:+83892659 Msa0431820:CDS
TGCAGATTCTTCTCAGCATA+TGG 0.396404 3_2:+83895003 Msa0431820:CDS
TTCAAGCAACAAAACTAATT+CGG 0.398524 3_2:+83895435 Msa0431820:CDS
AAATGTGTCATCACCTCTAT+AGG 0.404208 3_2:-83893464 None:intergenic
CTAAATTGGGAGGTTGGAAT+TGG 0.404734 3_2:-83894736 None:intergenic
CAATCAACCTGTTATGTGAA+TGG 0.404844 3_2:-83892666 None:intergenic
TCCTGTTGTTATTGGCCATC+AGG 0.408491 3_2:+83892044 Msa0431820:CDS
GCCATCAAATTTACAAATGA+AGG 0.414139 3_2:+83893833 Msa0431820:CDS
ACGTCAGCTCCAATATCTTC+TGG 0.420722 3_2:-83891406 None:intergenic
TTTACAAATGAAGGCAAAGT+AGG 0.421277 3_2:+83893842 Msa0431820:CDS
GTGTCTAGCAAAGAACAAAA+TGG 0.421334 3_2:+83894584 Msa0431820:CDS
TATACTCCCAATGTTTCATA+AGG 0.422050 3_2:-83891579 None:intergenic
TTCTGCATAGGTTGAGTTGA+TGG 0.425115 3_2:+83894547 Msa0431820:intron
TTGGATGTCATGTTGTCATC+TGG 0.426050 3_2:+83892911 Msa0431820:CDS
AGCAAGGCAGGTGAAACAAT+TGG 0.429476 3_2:+83892380 Msa0431820:CDS
ATCGAGCATTCACTCTTAAC+CGG 0.430609 3_2:-83894001 None:intergenic
CAAGCGATCGAGACCTTGTA+TGG 0.430770 3_2:-83894629 None:intergenic
TCACCTGCCTTGCTGAAGAC+AGG 0.433507 3_2:-83892371 None:intergenic
GCTCGAAAGTATGGTGGGAC+AGG 0.435553 3_2:+83894333 Msa0431820:CDS
ATATCTTCTGGCCACATTGA+AGG 0.436714 3_2:-83891394 None:intergenic
TCTTCAACGAGAAGGATCTT+AGG 0.437200 3_2:-83895094 None:intergenic
AGCGTACAAAAGATTAGTTC+AGG 0.440570 3_2:+83893911 Msa0431820:CDS
TCAATGTGGCCAGAAGATAT+TGG 0.443354 3_2:+83891397 Msa0431820:CDS
AAGTATGGTGGGACAGGGCT+AGG 0.445638 3_2:+83894339 Msa0431820:CDS
GGATGTTGAGCTAAGGAAGT+TGG 0.448739 3_2:+83891663 Msa0431820:CDS
ACTTTCTGGTGTTGTTAGCA+TGG 0.454583 3_2:+83892841 Msa0431820:CDS
ATTCACTGGATCTGGTGTTA+AGG 0.458619 3_2:+83892238 Msa0431820:CDS
TCCAATGACAACATATCAAA+AGG 0.462175 3_2:+83894860 Msa0431820:CDS
ATATCATCCAATATAGAAAC+CGG 0.463376 3_2:-83891739 None:intergenic
ATTACCTCCTCATGTAAACT+TGG 0.464486 3_2:-83892105 None:intergenic
TCCTGATGGCCAATAACAAC+AGG 0.466242 3_2:-83892045 None:intergenic
CTCCACTGGAAGAGACTAGA+TGG 0.466828 3_2:-83894760 None:intergenic
GGTTGTGATGTATATGATAC+AGG 0.469429 3_2:+83894076 Msa0431820:CDS
ACTAGCAATATGCAAACAAC+TGG 0.471382 3_2:+83894362 Msa0431820:CDS
ACAATATTCATAATCTCGAT+TGG 0.473357 3_2:-83895519 None:intergenic
AGCCTACCTTATGAAACATT+GGG 0.475348 3_2:+83891573 Msa0431820:CDS
ATTTGAGAGAGTTCTTCAAC+AGG 0.477140 3_2:-83891976 None:intergenic
GATGCACTTGGAAAAGTTGT+TGG 0.486450 3_2:+83891876 Msa0431820:CDS
GAGACTAGATGGCCTAAATT+GGG 0.487886 3_2:-83894749 None:intergenic
ACCTCAACTCTTTGTCCTGA+TGG 0.491700 3_2:-83892059 None:intergenic
GAACCTGTCTTCAGCAAGGC+AGG 0.495617 3_2:+83892368 Msa0431820:CDS
ATGACCCAACTGTTTCATCA+TGG 0.497053 3_2:-83895146 None:intergenic
CACATTCATACTTCCATACA+AGG 0.497367 3_2:+83894616 Msa0431820:CDS
TAGCCTACCTTATGAAACAT+TGG 0.501009 3_2:+83891572 Msa0431820:CDS
TTTCCAACCTGATTCAACCT+TGG 0.502835 3_2:-83892975 None:intergenic
GGGAATGGATGTAACAGATC+AGG 0.507588 3_2:+83892415 Msa0431820:CDS
CAAGGAGCAAAGACAGCTGT+TGG 0.510482 3_2:+83892892 Msa0431820:CDS
TGGAATCAATTACATGGGAA+TGG 0.513449 3_2:+83892400 Msa0431820:CDS
GTCGAAATATTCACTGGATC+TGG 0.516463 3_2:+83892230 Msa0431820:CDS
AGTATGATACTGTTGTGTAC+TGG 0.516963 3_2:+83891842 Msa0431820:CDS
GATGGCCTAAATTGGGAGGT+TGG 0.523038 3_2:-83894742 None:intergenic
AGTGTATTGAACAATACTTA+AGG 0.523347 3_2:+83895850 Msa0431820:CDS
AACAATTGGAATCAATTACA+TGG 0.523571 3_2:+83892394 Msa0431820:CDS
AGCAGATGATGTACCTATAG+AGG 0.523933 3_2:+83893451 Msa0431820:CDS
CAACCTAAACAAACAAAGAC+AGG 0.527200 3_2:+83891642 Msa0431820:CDS
ATTGGAAGAACATAGATTTG+AGG 0.528522 3_2:+83891690 Msa0431820:CDS
CTGTGTAGGAGTTATGAAGT+TGG 0.528994 3_2:+83893334 Msa0431820:intron
ATGCTAACAACACCAGAAAG+TGG 0.529641 3_2:-83892839 None:intergenic
TCTGCATAGGTTGAGTTGAT+GGG 0.531045 3_2:+83894548 Msa0431820:intron
CTTTCCAAGTTTACATGAGG+AGG 0.532167 3_2:+83892101 Msa0431820:CDS
ACTGATGTCGAAATATTCAC+TGG 0.534032 3_2:+83892224 Msa0431820:CDS
ACATGCTTTACTACCTCTCT+AGG 0.534889 3_2:-83893374 None:intergenic
GATGTATATGATACAGGCAT+TGG 0.535140 3_2:+83894082 Msa0431820:CDS
CAATATTCATAATCTCGATT+GGG 0.535165 3_2:-83895518 None:intergenic
CTCAGATGAATTCTCAGACA+TGG 0.538037 3_2:+83894667 Msa0431820:CDS
CTAGTGCTTACCGCAACAAT+GGG 0.538212 3_2:-83895563 None:intergenic
GGCCATCTAGTCTCTTCCAG+TGG 0.542757 3_2:+83894758 Msa0431820:CDS
ACAATCCATGATGAAACAGT+TGG 0.545179 3_2:+83895141 Msa0431820:CDS
TCTTGTTATCTTCAACGAGA+AGG 0.545648 3_2:-83895102 None:intergenic
TCTAGTGCTTACCGCAACAA+TGG 0.547183 3_2:-83895564 None:intergenic
TAATGATGAGTGTAGATCTC+CGG 0.548746 3_2:+83893982 Msa0431820:CDS
GAAACATTGGGAGTATAAGC+AGG 0.551772 3_2:+83891585 Msa0431820:CDS
TGGAGCAGAGGCGGTGCGTG+CGG 0.557895 3_2:+83895189 Msa0431820:CDS
TTACAAATGAAGGCAAAGTA+GGG 0.560913 3_2:+83893843 Msa0431820:CDS
TATGTTGTCATTGGAAGTAG+AGG 0.564452 3_2:-83894852 None:intergenic
TGACATACTTGATCTTTCCA+AGG 0.565536 3_2:+83892958 Msa0431820:CDS
TACATATGACCTGGTTCTGA+TGG 0.568683 3_2:+83895222 Msa0431820:CDS
GCACTTGGAAAAGTTGTTGG+AGG 0.568733 3_2:+83891879 Msa0431820:CDS
GAAACAGCGAGCGATGCACT+TGG 0.570341 3_2:+83891864 Msa0431820:CDS
CAATCCATGATGAAACAGTT+GGG 0.571813 3_2:+83895142 Msa0431820:CDS
AGATAACAAGATTAACATCA+TGG 0.572107 3_2:+83895114 Msa0431820:CDS
CATTATATAGATGATGTTTG+TGG 0.574874 3_2:-83894955 None:intergenic
TTCCACCACAAAACTTGACA+AGG 0.576173 3_2:+83892874 Msa0431820:CDS
TATGAGAGCAAAGAAAGTGC+TGG 0.576593 3_2:+83892790 Msa0431820:CDS
GGAGTATAAGCAGGCGAGCG+TGG 0.578452 3_2:+83891594 Msa0431820:CDS
ATGATGCTGCGGCTGTCTGA+AGG 0.579152 3_2:-83893397 None:intergenic
CCTCATGTAAACTTGGAAAG+TGG 0.579172 3_2:-83892098 None:intergenic
AGATTTGAGGACGAAAGATA+CGG 0.579302 3_2:+83891703 Msa0431820:CDS
ATCTATATAATGCTCATGCA+TGG 0.579361 3_2:+83894966 Msa0431820:CDS
TCTGATGATACAACAACAGA+AGG 0.580893 3_2:+83894707 Msa0431820:CDS
CCACTTTCCAAGTTTACATG+AGG 0.590769 3_2:+83892098 Msa0431820:CDS
AAAGACAGGATGTTGAGCTA+AGG 0.596277 3_2:+83891656 Msa0431820:CDS
CTCGAAAGTATGGTGGGACA+GGG 0.596487 3_2:+83894334 Msa0431820:CDS
TACCAAATTTCGACCTAGAG+AGG 0.598602 3_2:+83893361 Msa0431820:CDS
GCTCATGCATGGTTCCAGAA+TGG 0.599781 3_2:+83894977 Msa0431820:CDS
AAGAGTGAATGCTCGATGAA+CGG 0.601254 3_2:+83894007 Msa0431820:CDS
CAGTTCAATATAGAAAAGCC+AGG 0.602854 3_2:+83891436 Msa0431820:CDS
GAAGATATTGGAGCTGACGT+TGG 0.611663 3_2:+83891409 Msa0431820:CDS
GATACAGGCATTGGAATACC+AGG 0.612622 3_2:+83894091 Msa0431820:CDS
AAAGCGAATTCCCATTGTTG+CGG 0.612866 3_2:+83895553 Msa0431820:CDS
CTTCTGGCCACATTGAAGGA+AGG 0.613983 3_2:-83891390 None:intergenic
AATGCAACAACAGTGTGGAT+AGG 0.617754 3_2:+83894055 Msa0431820:CDS
ACAATTGGAATCAATTACAT+GGG 0.619533 3_2:+83892395 Msa0431820:CDS
ATCACGCTCGAAAGTATGGT+GGG 0.619892 3_2:+83894328 Msa0431820:CDS
CATAAATTACCATCAGAACC+AGG 0.627013 3_2:-83895231 None:intergenic
TGTAGAACCTGTCTTCAGCA+AGG 0.629088 3_2:+83892364 Msa0431820:CDS
GTGTGCATGCCAATTATGGA+TGG 0.635228 3_2:+83895410 Msa0431820:CDS
AAATTCTCACAAATTTAACC+AGG 0.643959 3_2:+83893640 Msa0431820:CDS
CTCCCAATGTTTCATAAGGT+AGG 0.643980 3_2:-83891575 None:intergenic
GCATAGGTTGAGTTGATGGG+AGG 0.644228 3_2:+83894551 Msa0431820:intron
TCAGCGCTGTACATATGACC+TGG 0.644473 3_2:+83895213 Msa0431820:CDS
ATACGGAGGCCATAAACGAC+CGG 0.646119 3_2:+83891720 Msa0431820:CDS
AGATTCTTCTCAGCATATGG+TGG 0.646433 3_2:+83895006 Msa0431820:CDS
GATTGCTGTTCAGAAAGCAA+AGG 0.648370 3_2:+83892625 Msa0431820:CDS
TGTCAATAATGGAGCAGAGG+CGG 0.649552 3_2:+83895180 Msa0431820:CDS
GAAAATCCACAAAATTTGTG+CGG 0.650564 3_2:-83894809 None:intergenic
ATGTTGTCATTGGAAGTAGA+GGG 0.650718 3_2:-83894851 None:intergenic
GATCACGCTCGAAAGTATGG+TGG 0.655464 3_2:+83894327 Msa0431820:CDS
GCCATCAGGACAAAGAGTTG+AGG 0.656169 3_2:+83892058 Msa0431820:CDS
TGTTGTCAATAATGGAGCAG+AGG 0.659976 3_2:+83895177 Msa0431820:CDS
TTGAAGTCCTTCCTTCAATG+TGG 0.668513 3_2:+83891383 Msa0431820:CDS
ACTAGATGGCCTAAATTGGG+AGG 0.678417 3_2:-83894746 None:intergenic
ACTCAAATGCAACAACAGTG+TGG 0.687455 3_2:+83894050 Msa0431820:CDS
CTCGATGAACGGAGACACAG+AGG 0.693267 3_2:+83894018 Msa0431820:CDS
GTATGGAAGTATGAATGTGA+AGG 0.713387 3_2:-83894612 None:intergenic
TTTGAGGACGAAAGATACGG+AGG 0.715280 3_2:+83891706 Msa0431820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTATTTTTTAAATTTT+TGG + chr3_2:83892525-83892544 Msa0431820:intron 10.0%
!! AATTATTTAAACTTATCTAT+TGG + chr3_2:83893039-83893058 Msa0431820:intron 10.0%
!!! TTTCTATTATATTTTGTTAT+AGG + chr3_2:83893174-83893193 Msa0431820:intron 10.0%
!!! TTCTATTATATTTTGTTATA+GGG + chr3_2:83893175-83893194 Msa0431820:intron 10.0%
!!! AAAACTAATTAATTTGATAG+AGG - chr3_2:83892723-83892742 None:intergenic 15.0%
!! TTAAATAATTCAATCTAAAC+AGG - chr3_2:83893029-83893048 None:intergenic 15.0%
!! CAATACATAGTTTATTTAAA+AGG + chr3_2:83894286-83894305 Msa0431820:CDS 15.0%
!! TGGATGATATTTATGATATA+TGG + chr3_2:83891752-83891771 Msa0431820:CDS 20.0%
! ATATCATCCAATATAGAAAC+CGG - chr3_2:83891742-83891761 None:intergenic 25.0%
!! ATTTTCTGTCATCTTTTTTC+AGG + chr3_2:83892187-83892206 Msa0431820:intron 25.0%
!!! ATCTTTTTTCAGGACATAAT+AGG + chr3_2:83892197-83892216 Msa0431820:intron 25.0%
! AACAATTGGAATCAATTACA+TGG + chr3_2:83892394-83892413 Msa0431820:CDS 25.0%
! ACAATTGGAATCAATTACAT+GGG + chr3_2:83892395-83892414 Msa0431820:CDS 25.0%
! ATGAATCTCTTGAAAAATGT+AGG + chr3_2:83892565-83892584 Msa0431820:intron 25.0%
! AATAAAACCATTCACATAAC+AGG + chr3_2:83892659-83892678 Msa0431820:CDS 25.0%
!! TTTCCTCATCTTTTTAATAG+AGG + chr3_2:83892763-83892782 Msa0431820:intron 25.0%
! TTTCCTCTATTAAAAAGATG+AGG - chr3_2:83892769-83892788 None:intergenic 25.0%
! CAGAAAATATTAACCATAGA+AGG + chr3_2:83893422-83893441 Msa0431820:CDS 25.0%
! AAATTCTCACAAATTTAACC+AGG + chr3_2:83893640-83893659 Msa0431820:CDS 25.0%
! TCACATAAAAATTTAGTACC+TGG - chr3_2:83893661-83893680 None:intergenic 25.0%
! GTAGTGAAAGAAGAAAAATA+TGG + chr3_2:83893956-83893975 Msa0431820:CDS 25.0%
! TAGTTATAGTAGATAATACC+TGG - chr3_2:83894112-83894131 None:intergenic 25.0%
! AAACAGAAGAATAGAGATTA+AGG - chr3_2:83894164-83894183 None:intergenic 25.0%
!! AATTTCTTGTGTAGAGTATT+TGG + chr3_2:83894387-83894406 Msa0431820:intron 25.0%
! ATAAAATGTAACTTCTGCAT+AGG + chr3_2:83894535-83894554 Msa0431820:intron 25.0%
!!! AGTTGATGATTCAAATTCAT+TGG + chr3_2:83894892-83894911 Msa0431820:CDS 25.0%
! CATTATATAGATGATGTTTG+TGG - chr3_2:83894958-83894977 None:intergenic 25.0%
! AGATAACAAGATTAACATCA+TGG + chr3_2:83895114-83895133 Msa0431820:CDS 25.0%
! AACATAGATGTTGTCAATAA+TGG + chr3_2:83895169-83895188 Msa0431820:CDS 25.0%
! AATATATCAATAAGCAGCAT+TGG - chr3_2:83895333-83895352 None:intergenic 25.0%
! TTCAAGCAACAAAACTAATT+CGG + chr3_2:83895435-83895454 Msa0431820:CDS 25.0%
! CAATATTCATAATCTCGATT+GGG - chr3_2:83895521-83895540 None:intergenic 25.0%
! ACAATATTCATAATCTCGAT+TGG - chr3_2:83895522-83895541 None:intergenic 25.0%
! AGTGTATTGAACAATACTTA+AGG + chr3_2:83895850-83895869 Msa0431820:CDS 25.0%
AACATATCTTGATCATTTCC+TGG - chr3_2:83891457-83891476 None:intergenic 30.0%
CTCACAAATTTCACAGAAAA+AGG + chr3_2:83891538-83891557 Msa0431820:CDS 30.0%
TATACTCCCAATGTTTCATA+AGG - chr3_2:83891582-83891601 None:intergenic 30.0%
ATTGGAAGAACATAGATTTG+AGG + chr3_2:83891690-83891709 Msa0431820:CDS 30.0%
!!! ACAACATTACTTTTTCTGCA+AGG - chr3_2:83891790-83891809 None:intergenic 30.0%
AAACTTCCCTCTTAAAATCT+TGG - chr3_2:83892268-83892287 None:intergenic 30.0%
!! AGATTTTAAGAGGGAAGTTT+TGG + chr3_2:83892268-83892287 Msa0431820:CDS 30.0%
!!! ACTTTTGAGACAGAACTATT+TGG + chr3_2:83892320-83892339 Msa0431820:CDS 30.0%
! GCAAAAAAGTATATGTATCC+TGG - chr3_2:83892477-83892496 None:intergenic 30.0%
TGTAGGTTAGAAAAAGAGAA+AGG + chr3_2:83892582-83892601 Msa0431820:intron 30.0%
!! TCTAATATGGATTGGAAACA+AGG - chr3_2:83893006-83893025 None:intergenic 30.0%
TAAACAGGTCTAATATGGAT+TGG - chr3_2:83893014-83893033 None:intergenic 30.0%
CAATCTAAACAGGTCTAATA+TGG - chr3_2:83893019-83893038 None:intergenic 30.0%
!! ATAAGTTGTTTTCAGCGTAT+CGG + chr3_2:83893063-83893082 Msa0431820:intron 30.0%
AGCTATCTTAAAGACTTTAC+AGG - chr3_2:83893116-83893135 None:intergenic 30.0%
! ATCTAGTTTATGTATCACTG+AGG - chr3_2:83893275-83893294 None:intergenic 30.0%
!!! TTGGTGATGTTTTAAGGATT+CGG + chr3_2:83893616-83893635 Msa0431820:CDS 30.0%
GCCATCAAATTTACAAATGA+AGG + chr3_2:83893833-83893852 Msa0431820:CDS 30.0%
GCCTTCATTTGTAAATTTGA+TGG - chr3_2:83893837-83893856 None:intergenic 30.0%
TTTACAAATGAAGGCAAAGT+AGG + chr3_2:83893842-83893861 Msa0431820:CDS 30.0%
TTACAAATGAAGGCAAAGTA+GGG + chr3_2:83893843-83893862 Msa0431820:CDS 30.0%
! ACTAATCTTTTGTACGCTTT+CGG - chr3_2:83893909-83893928 None:intergenic 30.0%
TTTCACTACATTCACAGAAA+TGG - chr3_2:83893945-83893964 None:intergenic 30.0%
GAAAATCCACAAAATTTGTG+CGG - chr3_2:83894812-83894831 None:intergenic 30.0%
TCCAATGACAACATATCAAA+AGG + chr3_2:83894860-83894879 Msa0431820:CDS 30.0%
! TCCTTTTGATATGTTGTCAT+TGG - chr3_2:83894864-83894883 None:intergenic 30.0%
ATCTATATAATGCTCATGCA+TGG + chr3_2:83894966-83894985 Msa0431820:CDS 30.0%
AATTATTCGTAGAGAGAAAG+TGG - chr3_2:83895278-83895297 None:intergenic 30.0%
ATTTCATAGTTGCACTTTAC+AGG + chr3_2:83895385-83895404 Msa0431820:intron 30.0%
! AAAACTAATTCGGTCTTTTG+AGG + chr3_2:83895445-83895464 Msa0431820:CDS 30.0%
ATCCTTACTATGAATGTCTT+TGG + chr3_2:83895693-83895712 Msa0431820:intron 30.0%
TCCTTACTATGAATGTCTTT+GGG + chr3_2:83895694-83895713 Msa0431820:intron 30.0%
! AGAATGTTTTGCTAATGGTA+TGG + chr3_2:83895785-83895804 Msa0431820:CDS 30.0%
AGAGTGTGTTGAGGATATTA+TGG + chr3_2:83891357-83891376 Msa0431820:CDS 35.0%
CAGTTCAATATAGAAAAGCC+AGG + chr3_2:83891436-83891455 Msa0431820:CDS 35.0%
TAGCCTACCTTATGAAACAT+TGG + chr3_2:83891572-83891591 Msa0431820:CDS 35.0%
AGCCTACCTTATGAAACATT+GGG + chr3_2:83891573-83891592 Msa0431820:CDS 35.0%
CAACCTAAACAAACAAAGAC+AGG + chr3_2:83891642-83891661 Msa0431820:CDS 35.0%
! CATCCTGTCTTTGTTTGTTT+AGG - chr3_2:83891648-83891667 None:intergenic 35.0%
AGATTTGAGGACGAAAGATA+CGG + chr3_2:83891703-83891722 Msa0431820:CDS 35.0%
ATATAGAAACCGGTCGTTTA+TGG - chr3_2:83891732-83891751 None:intergenic 35.0%
! TAAACGACCGGTTTCTATAT+TGG + chr3_2:83891732-83891751 Msa0431820:CDS 35.0%
AGTATGATACTGTTGTGTAC+TGG + chr3_2:83891842-83891861 Msa0431820:CDS 35.0%
ATTTGAGAGAGTTCTTCAAC+AGG - chr3_2:83891979-83891998 None:intergenic 35.0%
!!! CAATAACAACAGGAGCATTT+TGG - chr3_2:83892038-83892057 None:intergenic 35.0%
CAAAATGCTCCTGTTGTTAT+TGG + chr3_2:83892036-83892055 Msa0431820:CDS 35.0%
ATTACCTCCTCATGTAAACT+TGG - chr3_2:83892108-83892127 None:intergenic 35.0%
TGTTGAAGCTCTTCTTGAAA+AGG + chr3_2:83892137-83892156 Msa0431820:intron 35.0%
ACTGATGTCGAAATATTCAC+TGG + chr3_2:83892224-83892243 Msa0431820:CDS 35.0%
! AGGAGAACCAAGATTTTAAG+AGG + chr3_2:83892258-83892277 Msa0431820:CDS 35.0%
!! GGAGAACCAAGATTTTAAGA+GGG + chr3_2:83892259-83892278 Msa0431820:CDS 35.0%
!!! AAGAGGGAAGTTTTGGAAAA+AGG + chr3_2:83892275-83892294 Msa0431820:CDS 35.0%
AAAAAGGATTGCCTGCAAAA+AGG + chr3_2:83892291-83892310 Msa0431820:CDS 35.0%
AAAAGGATTGCCTGCAAAAA+GGG + chr3_2:83892292-83892311 Msa0431820:CDS 35.0%
! AAAGTGATTTCCCTTTTTGC+AGG - chr3_2:83892305-83892324 None:intergenic 35.0%
TGGAATCAATTACATGGGAA+TGG + chr3_2:83892400-83892419 Msa0431820:CDS 35.0%
! GTTACTCCCTACGAAATTTT+TGG + chr3_2:83892450-83892469 Msa0431820:intron 35.0%
TTGCTTATATATCGTTCCAG+AGG + chr3_2:83892493-83892512 Msa0431820:intron 35.0%
TGCTTATATATCGTTCCAGA+GGG + chr3_2:83892494-83892513 Msa0431820:intron 35.0%
GGTTAGAAAAAGAGAAAGGA+TGG + chr3_2:83892586-83892605 Msa0431820:intron 35.0%
CAATCAACCTGTTATGTGAA+TGG - chr3_2:83892669-83892688 None:intergenic 35.0%
TGACATACTTGATCTTTCCA+AGG + chr3_2:83892958-83892977 Msa0431820:CDS 35.0%
! CTACACAGAATGCAGATTTT+GGG - chr3_2:83893322-83893341 None:intergenic 35.0%
! TATTTTCTGCAATGATGCTG+CGG - chr3_2:83893411-83893430 None:intergenic 35.0%
AAATGTGTCATCACCTCTAT+AGG - chr3_2:83893467-83893486 None:intergenic 35.0%
!!! AGGTCATTGGTGATGTTTTA+AGG + chr3_2:83893610-83893629 Msa0431820:intron 35.0%
TTTACACCTTCAGTGTGTAT+CGG + chr3_2:83893743-83893762 Msa0431820:intron 35.0%
!!! CTTTCGGGTTTTGTAAAACT+TGG - chr3_2:83893893-83893912 None:intergenic 35.0%
! CTAATCTTTTGTACGCTTTC+GGG - chr3_2:83893908-83893927 None:intergenic 35.0%
! AGCGTACAAAAGATTAGTTC+AGG + chr3_2:83893911-83893930 Msa0431820:CDS 35.0%
TAATGATGAGTGTAGATCTC+CGG + chr3_2:83893982-83894001 Msa0431820:CDS 35.0%
GGTTGTGATGTATATGATAC+AGG + chr3_2:83894076-83894095 Msa0431820:CDS 35.0%
GATGTATATGATACAGGCAT+TGG + chr3_2:83894082-83894101 Msa0431820:CDS 35.0%
ACTAGCAATATGCAAACAAC+TGG + chr3_2:83894362-83894381 Msa0431820:CDS 35.0%
! GTGTAGAGTATTTGGTTACA+TGG + chr3_2:83894395-83894414 Msa0431820:intron 35.0%
GTGTCTAGCAAAGAACAAAA+TGG + chr3_2:83894584-83894603 Msa0431820:CDS 35.0%
! GTATGGAAGTATGAATGTGA+AGG - chr3_2:83894615-83894634 None:intergenic 35.0%
CACATTCATACTTCCATACA+AGG + chr3_2:83894616-83894635 Msa0431820:CDS 35.0%
TCTGATGATACAACAACAGA+AGG + chr3_2:83894707-83894726 Msa0431820:CDS 35.0%
! TTATTGCCGCACAAATTTTG+TGG + chr3_2:83894803-83894822 Msa0431820:CDS 35.0%
ATGTTGTCATTGGAAGTAGA+GGG - chr3_2:83894854-83894873 None:intergenic 35.0%
TATGTTGTCATTGGAAGTAG+AGG - chr3_2:83894855-83894874 None:intergenic 35.0%
AAGAATCTGCAATACCATTC+TGG - chr3_2:83894994-83895013 None:intergenic 35.0%
! CTTAGGCTTTGATATGGATT+TGG - chr3_2:83895080-83895099 None:intergenic 35.0%
! AAGGATCTTAGGCTTTGATA+TGG - chr3_2:83895086-83895105 None:intergenic 35.0%
! TCTTGTTATCTTCAACGAGA+AGG - chr3_2:83895105-83895124 None:intergenic 35.0%
ACAATCCATGATGAAACAGT+TGG + chr3_2:83895141-83895160 Msa0431820:CDS 35.0%
CAATCCATGATGAAACAGTT+GGG + chr3_2:83895142-83895161 Msa0431820:CDS 35.0%
CATAAATTACCATCAGAACC+AGG - chr3_2:83895234-83895253 None:intergenic 35.0%
!! CTGGTTCTGATGGTAATTTA+TGG + chr3_2:83895232-83895251 Msa0431820:intron 35.0%
!! TTTTGAGGAAACAGGCAATT+GGG + chr3_2:83895460-83895479 Msa0431820:CDS 35.0%
TCCCAAAGACATTCATAGTA+AGG - chr3_2:83895698-83895717 None:intergenic 35.0%
! GCTGAAGAATGTTTTGCTAA+TGG + chr3_2:83895780-83895799 Msa0431820:CDS 35.0%
! TTCAATTTTCGTAAACTCGC+AGG - chr3_2:83895828-83895847 None:intergenic 35.0%
TTGAAGTCCTTCCTTCAATG+TGG + chr3_2:83891383-83891402 Msa0431820:CDS 40.0%
ATATCTTCTGGCCACATTGA+AGG - chr3_2:83891397-83891416 None:intergenic 40.0%
TCAATGTGGCCAGAAGATAT+TGG + chr3_2:83891397-83891416 Msa0431820:CDS 40.0%
CTCCCAATGTTTCATAAGGT+AGG - chr3_2:83891578-83891597 None:intergenic 40.0%
! GAAACATTGGGAGTATAAGC+AGG + chr3_2:83891585-83891604 Msa0431820:CDS 40.0%
AAAGACAGGATGTTGAGCTA+AGG + chr3_2:83891656-83891675 Msa0431820:CDS 40.0%
GCTAAGGAAGTTGGAGATAT+TGG + chr3_2:83891672-83891691 Msa0431820:CDS 40.0%
GATGCACTTGGAAAAGTTGT+TGG + chr3_2:83891876-83891895 Msa0431820:CDS 40.0%
CCTCATGTAAACTTGGAAAG+TGG - chr3_2:83892101-83892120 None:intergenic 40.0%
CCACTTTCCAAGTTTACATG+AGG + chr3_2:83892098-83892117 Msa0431820:CDS 40.0%
CTTTCCAAGTTTACATGAGG+AGG + chr3_2:83892101-83892120 Msa0431820:CDS 40.0%
GTCGAAATATTCACTGGATC+TGG + chr3_2:83892230-83892249 Msa0431820:CDS 40.0%
! ATTCACTGGATCTGGTGTTA+AGG + chr3_2:83892238-83892257 Msa0431820:CDS 40.0%
CCTGGTCCAAAAATTTCGTA+GGG - chr3_2:83892459-83892478 None:intergenic 40.0%
TCCTGGTCCAAAAATTTCGT+AGG - chr3_2:83892460-83892479 None:intergenic 40.0%
TAAGAAGTCAATACTCCCTC+TGG - chr3_2:83892512-83892531 None:intergenic 40.0%
! GATTGCTGTTCAGAAAGCAA+AGG + chr3_2:83892625-83892644 Msa0431820:CDS 40.0%
! TATGAGAGCAAAGAAAGTGC+TGG + chr3_2:83892790-83892809 Msa0431820:CDS 40.0%
GAGATAAGATCTCCACTTTC+TGG + chr3_2:83892827-83892846 Msa0431820:CDS 40.0%
ATGCTAACAACACCAGAAAG+TGG - chr3_2:83892842-83892861 None:intergenic 40.0%
!! ACTTTCTGGTGTTGTTAGCA+TGG + chr3_2:83892841-83892860 Msa0431820:CDS 40.0%
TTCCACCACAAAACTTGACA+AGG + chr3_2:83892874-83892893 Msa0431820:CDS 40.0%
! TTGCTCCTTGTCAAGTTTTG+TGG - chr3_2:83892882-83892901 None:intergenic 40.0%
TTGGATGTCATGTTGTCATC+TGG + chr3_2:83892911-83892930 Msa0431820:CDS 40.0%
CATGTTGTCATCTGGAGATT+TGG + chr3_2:83892919-83892938 Msa0431820:CDS 40.0%
GATCTTTCCAAGGTTGAATC+AGG + chr3_2:83892968-83892987 Msa0431820:CDS 40.0%
TTTCCAAGGTTGAATCAGGT+TGG + chr3_2:83892972-83892991 Msa0431820:intron 40.0%
TTTCCAACCTGATTCAACCT+TGG - chr3_2:83892978-83892997 None:intergenic 40.0%
! CCTACACAGAATGCAGATTT+TGG - chr3_2:83893323-83893342 None:intergenic 40.0%
CCAAAATCTGCATTCTGTGT+AGG + chr3_2:83893320-83893339 Msa0431820:intron 40.0%
CTGTGTAGGAGTTATGAAGT+TGG + chr3_2:83893334-83893353 Msa0431820:intron 40.0%
TACCAAATTTCGACCTAGAG+AGG + chr3_2:83893361-83893380 Msa0431820:CDS 40.0%
TACCTCTCTAGGTCGAAATT+TGG - chr3_2:83893366-83893385 None:intergenic 40.0%
ACATGCTTTACTACCTCTCT+AGG - chr3_2:83893377-83893396 None:intergenic 40.0%
ATCTGCTACATGTCCTTCTA+TGG - chr3_2:83893438-83893457 None:intergenic 40.0%
AGCAGATGATGTACCTATAG+AGG + chr3_2:83893451-83893470 Msa0431820:CDS 40.0%
TCATGTCCATCTAGTACACA+TGG - chr3_2:83893515-83893534 None:intergenic 40.0%
TCTGCTTCATTCGTAATTGC+AGG + chr3_2:83893590-83893609 Msa0431820:intron 40.0%
CATTCGTAATTGCAGGTCAT+TGG + chr3_2:83893597-83893616 Msa0431820:intron 40.0%
ACTTAACCGATACACACTGA+AGG - chr3_2:83893752-83893771 None:intergenic 40.0%
! TTGGCTCTTGCACAACATAA+AGG - chr3_2:83893874-83893893 None:intergenic 40.0%
ATCGAGCATTCACTCTTAAC+CGG - chr3_2:83894004-83894023 None:intergenic 40.0%
AAGAGTGAATGCTCGATGAA+CGG + chr3_2:83894007-83894026 Msa0431820:CDS 40.0%
ACTCAAATGCAACAACAGTG+TGG + chr3_2:83894050-83894069 Msa0431820:CDS 40.0%
AATGCAACAACAGTGTGGAT+AGG + chr3_2:83894055-83894074 Msa0431820:CDS 40.0%
!! TTCTGCATAGGTTGAGTTGA+TGG + chr3_2:83894547-83894566 Msa0431820:intron 40.0%
!! TCTGCATAGGTTGAGTTGAT+GGG + chr3_2:83894548-83894567 Msa0431820:intron 40.0%
CTCAGATGAATTCTCAGACA+TGG + chr3_2:83894667-83894686 Msa0431820:CDS 40.0%
CTAAATTGGGAGGTTGGAAT+TGG - chr3_2:83894739-83894758 None:intergenic 40.0%
CAATTCCAACCTCCCAATTT+AGG + chr3_2:83894737-83894756 Msa0431820:CDS 40.0%
GAGACTAGATGGCCTAAATT+GGG - chr3_2:83894752-83894771 None:intergenic 40.0%
AGAGACTAGATGGCCTAAAT+TGG - chr3_2:83894753-83894772 None:intergenic 40.0%
TGCAGATTCTTCTCAGCATA+TGG + chr3_2:83895003-83895022 Msa0431820:CDS 40.0%
AGATTCTTCTCAGCATATGG+TGG + chr3_2:83895006-83895025 Msa0431820:CDS 40.0%
TCTTCAACGAGAAGGATCTT+AGG - chr3_2:83895097-83895116 None:intergenic 40.0%
ATGACCCAACTGTTTCATCA+TGG - chr3_2:83895149-83895168 None:intergenic 40.0%
! TGTTGTCAATAATGGAGCAG+AGG + chr3_2:83895177-83895196 Msa0431820:CDS 40.0%
!! TACATATGACCTGGTTCTGA+TGG + chr3_2:83895222-83895241 Msa0431820:CDS 40.0%
GCTTGAAGACCATCCATAAT+TGG - chr3_2:83895422-83895441 None:intergenic 40.0%
!! ATTCGGTCTTTTGAGGAAAC+AGG + chr3_2:83895452-83895471 Msa0431820:CDS 40.0%
!! CTTTTGAGGAAACAGGCAAT+TGG + chr3_2:83895459-83895478 Msa0431820:CDS 40.0%
ATGGGAATTCGCTTTGTAGA+TGG - chr3_2:83895548-83895567 None:intergenic 40.0%
AAAGCGAATTCCCATTGTTG+CGG + chr3_2:83895553-83895572 Msa0431820:CDS 40.0%
ACGTCAGCTCCAATATCTTC+TGG - chr3_2:83891409-83891428 None:intergenic 45.0%
GAAGATATTGGAGCTGACGT+TGG + chr3_2:83891409-83891428 Msa0431820:CDS 45.0%
GGATGTTGAGCTAAGGAAGT+TGG + chr3_2:83891663-83891682 Msa0431820:CDS 45.0%
TTTGAGGACGAAAGATACGG+AGG + chr3_2:83891706-83891725 Msa0431820:CDS 45.0%
GCACTTGGAAAAGTTGTTGG+AGG + chr3_2:83891879-83891898 Msa0431820:CDS 45.0%
! TCCTGTTGTTATTGGCCATC+AGG + chr3_2:83892044-83892063 Msa0431820:CDS 45.0%
TCCTGATGGCCAATAACAAC+AGG - chr3_2:83892048-83892067 None:intergenic 45.0%
ACCTCAACTCTTTGTCCTGA+TGG - chr3_2:83892062-83892081 None:intergenic 45.0%
TGTAGAACCTGTCTTCAGCA+AGG + chr3_2:83892364-83892383 Msa0431820:CDS 45.0%
AGCAAGGCAGGTGAAACAAT+TGG + chr3_2:83892380-83892399 Msa0431820:CDS 45.0%
GGGAATGGATGTAACAGATC+AGG + chr3_2:83892415-83892434 Msa0431820:CDS 45.0%
!! CCCTACGAAATTTTTGGACC+AGG + chr3_2:83892456-83892475 Msa0431820:intron 45.0%
!! CTCCTTGTCAAGTTTTGTGG+TGG - chr3_2:83892879-83892898 None:intergenic 45.0%
!! GAATGCAGATTTTGGGAGGT+AGG - chr3_2:83893315-83893334 None:intergenic 45.0%
! CACAGAATGCAGATTTTGGG+AGG - chr3_2:83893319-83893338 None:intergenic 45.0%
GTGTTGCCATGTGTACTAGA+TGG + chr3_2:83893506-83893525 Msa0431820:intron 45.0%
!! GATACAGGCATTGGAATACC+AGG + chr3_2:83894091-83894110 Msa0431820:CDS 45.0%
GTAGATCACGCTCGAAAGTA+TGG + chr3_2:83894324-83894343 Msa0431820:CDS 45.0%
! ATCACGCTCGAAAGTATGGT+GGG + chr3_2:83894328-83894347 Msa0431820:CDS 45.0%
ACTAGATGGCCTAAATTGGG+AGG - chr3_2:83894749-83894768 None:intergenic 45.0%
! TGTCAATAATGGAGCAGAGG+CGG + chr3_2:83895180-83895199 Msa0431820:CDS 45.0%
GGATGTGTGCATGCCAATTA+TGG + chr3_2:83895406-83895425 Msa0431820:intron 45.0%
GTGTGCATGCCAATTATGGA+TGG + chr3_2:83895410-83895429 Msa0431820:CDS 45.0%
TGGGATGCTGCAAAAAATGC+CGG + chr3_2:83895479-83895498 Msa0431820:CDS 45.0%
CTAGTGCTTACCGCAACAAT+GGG - chr3_2:83895566-83895585 None:intergenic 45.0%
TCTAGTGCTTACCGCAACAA+TGG - chr3_2:83895567-83895586 None:intergenic 45.0%
CTTCTGGCCACATTGAAGGA+AGG - chr3_2:83891393-83891412 None:intergenic 50.0%
ATACGGAGGCCATAAACGAC+CGG + chr3_2:83891720-83891739 Msa0431820:CDS 50.0%
GCCATCAGGACAAAGAGTTG+AGG + chr3_2:83892058-83892077 Msa0431820:CDS 50.0%
CAAGGAGCAAAGACAGCTGT+TGG + chr3_2:83892892-83892911 Msa0431820:CDS 50.0%
! GATCACGCTCGAAAGTATGG+TGG + chr3_2:83894327-83894346 Msa0431820:CDS 50.0%
! CTCGAAAGTATGGTGGGACA+GGG + chr3_2:83894334-83894353 Msa0431820:CDS 50.0%
!! GCATAGGTTGAGTTGATGGG+AGG + chr3_2:83894551-83894570 Msa0431820:intron 50.0%
CAAGCGATCGAGACCTTGTA+TGG - chr3_2:83894632-83894651 None:intergenic 50.0%
GATGGCCTAAATTGGGAGGT+TGG - chr3_2:83894745-83894764 None:intergenic 50.0%
CTCCACTGGAAGAGACTAGA+TGG - chr3_2:83894763-83894782 None:intergenic 50.0%
GTGAGTTCTGTTTGCTCCAC+TGG - chr3_2:83894777-83894796 None:intergenic 50.0%
GCTCATGCATGGTTCCAGAA+TGG + chr3_2:83894977-83894996 Msa0431820:CDS 50.0%
TCAGCGCTGTACATATGACC+TGG + chr3_2:83895213-83895232 Msa0431820:CDS 50.0%
GGGTAGACTTTGCTCGATTC+CGG - chr3_2:83895501-83895520 None:intergenic 50.0%
GAAACAGCGAGCGATGCACT+TGG + chr3_2:83891864-83891883 Msa0431820:CDS 55.0%
GAACCTGTCTTCAGCAAGGC+AGG + chr3_2:83892368-83892387 Msa0431820:CDS 55.0%
TCACCTGCCTTGCTGAAGAC+AGG - chr3_2:83892374-83892393 None:intergenic 55.0%
ATGATGCTGCGGCTGTCTGA+AGG - chr3_2:83893400-83893419 None:intergenic 55.0%
CTCGATGAACGGAGACACAG+AGG + chr3_2:83894018-83894037 Msa0431820:CDS 55.0%
! GCTCGAAAGTATGGTGGGAC+AGG + chr3_2:83894333-83894352 Msa0431820:CDS 55.0%
! AAGTATGGTGGGACAGGGCT+AGG + chr3_2:83894339-83894358 Msa0431820:CDS 55.0%
GGCCATCTAGTCTCTTCCAG+TGG + chr3_2:83894758-83894777 Msa0431820:CDS 55.0%
GGAGTATAAGCAGGCGAGCG+TGG + chr3_2:83891594-83891613 Msa0431820:CDS 60.0%
TGGAGCAGAGGCGGTGCGTG+CGG + chr3_2:83895189-83895208 Msa0431820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83891349 83895875 83891349 ID=Msa0431820;Name=Msa0431820
chr3_2 mRNA 83891349 83895875 83891349 ID=Msa0431820-mRNA-1;Parent=Msa0431820;Name=Msa0431820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|11|0|949
chr3_2 exon 83891349 83892122 83891349 ID=Msa0431820-mRNA-1:exon:23597;Parent=Msa0431820-mRNA-1
chr3_2 exon 83892209 83892436 83892209 ID=Msa0431820-mRNA-1:exon:23598;Parent=Msa0431820-mRNA-1
chr3_2 exon 83892587 83892680 83892587 ID=Msa0431820-mRNA-1:exon:23599;Parent=Msa0431820-mRNA-1
chr3_2 exon 83892783 83892989 83892783 ID=Msa0431820-mRNA-1:exon:23600;Parent=Msa0431820-mRNA-1
chr3_2 exon 83893342 83893472 83893342 ID=Msa0431820-mRNA-1:exon:23601;Parent=Msa0431820-mRNA-1
chr3_2 exon 83893612 83893661 83893612 ID=Msa0431820-mRNA-1:exon:23602;Parent=Msa0431820-mRNA-1
chr3_2 exon 83893829 83894112 83893829 ID=Msa0431820-mRNA-1:exon:23603;Parent=Msa0431820-mRNA-1
chr3_2 exon 83894280 83894383 83894280 ID=Msa0431820-mRNA-1:exon:23604;Parent=Msa0431820-mRNA-1
chr3_2 exon 83894557 83895243 83894557 ID=Msa0431820-mRNA-1:exon:23605;Parent=Msa0431820-mRNA-1
chr3_2 exon 83895407 83895574 83895407 ID=Msa0431820-mRNA-1:exon:23606;Parent=Msa0431820-mRNA-1
chr3_2 exon 83895753 83895875 83895753 ID=Msa0431820-mRNA-1:exon:23607;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83891349 83892122 83891349 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83892209 83892436 83892209 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83892587 83892680 83892587 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83892783 83892989 83892783 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83893342 83893472 83893342 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83893612 83893661 83893612 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83893829 83894112 83893829 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83894280 83894383 83894280 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83894557 83895243 83894557 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83895407 83895574 83895407 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
chr3_2 CDS 83895753 83895875 83895753 ID=Msa0431820-mRNA-1:cds;Parent=Msa0431820-mRNA-1
Gene Sequence

>Msa0431820

ATGGAAAAAGAGTGTGTTGAGGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAGCTGACGTTGGAAAGCAGTTCAATATAGAAAAGCCAGGAAATGATCAAGATATGTTAGAAGAAGTATCAATCATAGATGAAGTTACAACTATAGCTGATTTCAAGCGTCTCATTGAGCTCACAAATTTCACAGAAAAAGGTTCTTCTCAGTTAGCCTACCTTATGAAACATTGGGAGTATAAGCAGGCGAGCGTGGCGCGTCTTCTAAGAGAAGAACTCGACAACCTAAACAAACAAAGACAGGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAACATAGATTTGAGGACGAAAGATACGGAGGCCATAAACGACCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAAGACGTGCCTTGCAGAAAAAGTAATGTTGTTGTACAAAACAAGAGAGTTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCACTTGGAAAAGTTGTTGGAGGCAAGTATTCAGAGAGAAGAGACACTTGAACAAAAGTTAAAAGAAAGTATCAAGAACATTGAAAGACAATCATCACCTGTTGAAGAACTCTCTCAAATTCTGAAGAGAGCAGATAATTTCTTGCATTTTATACTCCAAAATGCTCCTGTTGTTATTGGCCATCAGGACAAAGAGTTGAGGTATCGCTTTATCTATAACCACTTTCCAAGTTTACATGAGGAGGACATAATAGGAAAAACTGATGTCGAAATATTCACTGGATCTGGTGTTAAGGAGAACCAAGATTTTAAGAGGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGGCAGGTGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTTAGAAAAAGAGAAAGGATGGCGAAAATTCGCGAAGAGATTGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATAACAGAGGAAACTATGAGAGCAAAGAAAGTGCTGGCAACAATGTCACACGAGATAAGATCTCCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACAAAACTTGACAAGGAGCAAAGACAGCTGTTGGATGTCATGTTGTCATCTGGAGATTTGGTTCTTCAACTCATAAATGACATACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGACCTAGAGAGGTAGTAAAGCATGTCCTTCAGACAGCCGCAGCATCATTGCAGAAAATATTAACCATAGAAGGACATGTAGCAGATGATGTACCTATAGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAACCAGCAATGCCATCAAATTTACAAATGAAGGCAAAGTAGGGATAAACCTTTATGTTGTGCAAGAGCCAAGTTTTACAAAACCCGAAAGCGTACAAAAGATTAGTTCAGGCTATTCAACCATTTCTGTGAATGTAGTGAAAGAAGAAAAATATGGAGTTAATGATGAGTGTAGATCTCCGGTTAAGAGTGAATGCTCGATGAACGGAGACACAGAGGATCAATATAACTCAAATGCAACAACAGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAATACATAGTTTATTTAAAAGGTACATGCAAGTCAGTGTAGATCACGCTCGAAAGTATGGTGGGACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGAGGTCGTTTAACAGTGTCTAGCAAAGAACAAAATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCGATCGCTTGCGATAGTTCTGATTACTCAGATGAATTCTCAGACATGGAGCATAATGTTTCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCTCCCAATTTAGGCCATCTAGTCTCTTCCAGTGGAGCAAACAGAACTCACAACAAGTTATTGCCGCACAAATTTTGTGGATTTTCTGAGAGTTCATTCTCATTTCCCTCTACTTCCAATGACAACATATCAAAAGGAACATGTTCAGTTGATGATTCAAATTCATTGGTTGATGCTTCAGATATGTCTGAATCAGCTAGTTCATCTAGCCACAAACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTATTGCAGATTCTTCTCAGCATATGGTGGTAAACTCAACTACTCAATGTGCTTCTAGCAATAGTAAATCAGAAGTAACCAAATCCATATCAAAGCCTAAGATCCTTCTCGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAACAGTTGGGTCATAACATAGATGTTGTCAATAATGGAGCAGAGGCGGTGCGTGCGGTTCAGCGCTGTACATATGACCTGGTTCTGATGGATGTGTGCATGCCAATTATGGATGGTCTTCAAGCAACAAAACTAATTCGGTCTTTTGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCCGGAATCGAGCAAAGTCTACCCAATCGAGATTATGAATATTGTGCTCCATCTACAAAGCGAATTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCTAATGGTATGGACTCATTTGTGTCAAAACCTGCGAGTTTACGAAAATTGAAAGAGTGTATTGAACAATACTTAAGGTGA
Protein sequence

>Msa0431820

MEKECVEDIMEIEVLPSMWPEDIGADVGKQFNIEKPGNDQDMLEEVSIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQASVARLLREELDNLNKQRQDVELRKLEILEEHRFEDERYGGHKRPVSILDDIYDIWQQDVPCRKSNVVVQNKRVEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEQKLKESIKNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKENQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKKVLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTIEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTNEGKVGINLYVVQEPSFTKPESVQKISSGYSTISVNVVKEEKYGVNDECRSPVKSECSMNGDTEDQYNSNATTVWIGCDVYDTGIGIPENAIHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGRLTVSSKEQNGSTFTFILPYKVSIACDSSDYSDEFSDMEHNVSASDDTTTEGFFQFQPPNLGHLVSSSGANRTHNKLLPHKFCGFSESSFSFPSTSNDNISKGTCSVDDSNSLVDASDMSESASSSSHKHHLYNAHAWFQNGIADSSQHMVVNSTTQCASSNSKSEVTKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVNNGAEAVRAVQRCTYDLVLMDVCMPIMDGLQATKLIRSFEETGNWDAAKNAGIEQSLPNRDYEYCAPSTKRIPIVAMTANALSESAEECFANGMDSFVSKPASLRKLKECIEQYLR*