AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523440 MtrunA17_Chr3g0143921 97.580 909 22 0 1 909 1 909 0.0 1837
Msa0523440 MtrunA17_Chr6g0472281 36.057 918 476 27 20 907 17 853 5.52e-149 461
Msa0523440 MtrunA17_Chr1g0203081 42.241 580 300 11 135 701 120 677 7.25e-136 431
Msa0523440 MtrunA17_Chr1g0203081 45.946 74 39 1 818 891 886 958 3.18e-13 73.9
Msa0523440 MtrunA17_Chr4g0033791 33.624 803 445 22 138 896 146 904 5.78e-125 400
Msa0523440 MtrunA17_Chr2g0329671 40.219 547 277 14 134 665 167 678 1.41e-118 384
Msa0523440 MtrunA17_Chr5g0448621 40.000 475 218 14 29 487 27 450 2.94e-85 293
Msa0523440 MtrunA17_Chr5g0448621 46.349 315 156 6 584 895 607 911 4.80e-69 247
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523440 AT1G20640.1 48.144 889 386 17 21 900 7 829 0.0 724
Msa0523440 AT1G20640.3 48.144 889 386 17 21 900 7 829 0.0 724
Msa0523440 AT1G20640.2 48.144 889 386 17 21 900 7 829 0.0 724
Msa0523440 AT1G76350.2 46.075 879 361 18 25 892 11 787 0.0 704
Msa0523440 AT1G76350.1 46.075 879 361 18 25 892 11 787 0.0 704
Msa0523440 AT1G76350.4 46.075 879 361 18 25 892 11 787 0.0 704
Msa0523440 AT1G76350.3 46.075 879 361 18 25 892 11 787 0.0 704
Msa0523440 AT4G35270.2 42.251 942 461 20 23 899 23 946 0.0 665
Msa0523440 AT4G35270.1 42.251 942 461 20 23 899 23 946 0.0 665
Msa0523440 AT4G35270.3 42.251 942 461 20 23 899 23 946 0.0 665
Msa0523440 AT4G35270.4 42.251 942 461 20 23 899 23 946 0.0 665
Msa0523440 AT2G17150.1 41.794 914 450 19 23 899 27 895 0.0 639
Msa0523440 AT2G17150.6 41.794 914 450 19 23 899 27 895 0.0 639
Msa0523440 AT1G64530.1 36.679 807 392 19 126 893 92 818 2.16e-147 457
Msa0523440 AT2G17150.4 41.604 661 326 14 276 899 3 640 1.62e-144 444
Msa0523440 AT4G24020.1 35.807 849 424 24 139 907 147 954 2.20e-138 437
Msa0523440 AT1G64530.2 36.821 736 350 16 196 893 5 663 1.75e-135 421
Msa0523440 AT2G17150.2 39.394 627 320 12 23 615 27 627 6.89e-134 416
Msa0523440 AT2G17150.5 39.365 630 319 13 23 615 27 630 1.07e-132 413
Msa0523440 AT2G17150.3 39.365 630 319 13 23 615 27 630 1.07e-132 413
Msa0523440 AT2G43500.3 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.9 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.6 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.1 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.10 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.11 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.7 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.8 39.483 542 285 11 138 671 162 668 4.85e-121 390
Msa0523440 AT2G43500.5 38.739 555 284 12 138 671 162 681 7.56e-118 382
Msa0523440 AT2G43500.4 38.739 555 284 12 138 671 162 681 7.56e-118 382
Msa0523440 AT2G43500.2 38.378 555 286 12 138 671 162 681 1.30e-116 379
Msa0523440 AT3G59580.2 38.798 549 281 13 138 671 105 613 9.88e-116 375
Msa0523440 AT3G59580.3 38.798 549 281 13 138 671 105 613 9.88e-116 375
Msa0523440 AT3G59580.1 38.798 549 281 13 138 671 105 613 9.88e-116 375
Msa0523440 AT4G24020.2 34.459 711 349 21 277 907 1 674 3.88e-96 317
Msa0523440 AT4G38340.2 40.000 340 185 7 137 473 41 364 3.82e-70 246
Msa0523440 AT4G38340.2 77.381 84 19 0 585 668 419 502 5.37e-34 140
Msa0523440 AT4G38340.2 49.462 93 41 3 807 896 597 686 1.00e-15 82.4
Msa0523440 AT4G38340.1 40.000 340 185 7 137 473 112 435 2.03e-69 246
Msa0523440 AT4G38340.1 77.381 84 19 0 585 668 490 573 8.68e-34 140
Msa0523440 AT4G38340.1 49.462 93 41 3 807 896 668 757 1.03e-15 82.4

Find 233 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCGATATCAAATATT+TGG 0.153465 3_4:+76786510 Msa0523440:CDS
AAGATATGCTTATACAAATA+TGG 0.190554 3_4:+76783141 Msa0523440:CDS
TTCTCACATCTTATGATAAA+AGG 0.249810 3_4:+76782537 Msa0523440:five_prime_UTR
GTTTCCTGGCTTTGTGATCT+TGG 0.257901 3_4:-76786292 None:intergenic
GACCTTGATTCAAGTGAAAA+AGG 0.270581 3_4:-76783215 None:intergenic
GACTCGGTTCAAGGTGCCTC+TGG 0.272348 3_4:+76785905 Msa0523440:CDS
GTTTGCCTGGTCGAGTTTAT+AGG 0.274228 3_4:+76783321 Msa0523440:CDS
TCTTCATAACACCAATTCTT+TGG 0.279461 3_4:-76786442 None:intergenic
CTTGATTCAGAGTTGAGATT+AGG 0.293147 3_4:-76785997 None:intergenic
TCTCATCATGCCAGGTTGTT+TGG 0.296000 3_4:+76784382 Msa0523440:CDS
GCAAGTGTGTGTGTATATTT+TGG 0.307264 3_4:+76782182 Msa0523440:five_prime_UTR
CTTGCGAGTTATAACAAATA+AGG 0.307272 3_4:+76784561 Msa0523440:CDS
TTGATTTATTATCTTGAATC+AGG 0.308616 3_4:-76786261 None:intergenic
GTAACAAGCTAGTTCTGTTT+TGG 0.310708 3_4:+76782609 Msa0523440:five_prime_UTR
CCTTATCAGCTTCTCTGTTA+TGG 0.316161 3_4:-76783084 None:intergenic
GGTGATTTCGATGCACCTTC+AGG 0.318756 3_4:-76786070 None:intergenic
GGGTAACTTCTTGTCAAGTT+TGG 0.320273 3_4:+76784819 Msa0523440:CDS
AACTTGTGATGCAGATTTAG+AGG 0.322889 3_4:+76786558 Msa0523440:CDS
AGAACTCCTGATAAAATTAC+TGG 0.324430 3_4:-76786641 None:intergenic
AATTCTTTGGCAACCTAAAC+CGG 0.326494 3_4:-76786429 None:intergenic
GTGATGGCCGTTGCTGATAT+TGG 0.327958 3_4:+76784616 Msa0523440:CDS
TTGATTCAGAGTTGAGATTA+GGG 0.328089 3_4:-76785996 None:intergenic
TTCATTCTCTTGGCCTGCCT+TGG 0.333817 3_4:+76782863 Msa0523440:CDS
GGTGTTCACCAAGTGTTTCC+TGG 0.335547 3_4:-76786306 None:intergenic
GTATTAAGCGTTGGCCTTCT+CGG 0.340723 3_4:+76785834 Msa0523440:CDS
CAAGAAAGTCTTACTTTAAG+AGG 0.342735 3_4:+76784757 Msa0523440:CDS
TCAAAGATTGGATTGGAAAA+AGG 0.346376 3_4:-76782837 None:intergenic
GTTTGAGTTTAAGACTCATT+TGG 0.347090 3_4:+76783001 Msa0523440:CDS
ACAAGGGAGCAGGACATGTT+TGG 0.349788 3_4:+76783460 Msa0523440:CDS
TTCCTTCTATTCAAAATTCT+CGG 0.352144 3_4:+76785943 Msa0523440:CDS
CTATCGTCTCCAAATTTATC+AGG 0.353197 3_4:+76785968 Msa0523440:CDS
ATGGAGCATCACTTGTTAAT+AGG 0.355386 3_4:+76784271 Msa0523440:CDS
GGTAACTTCTTGTCAAGTTT+GGG 0.360621 3_4:+76784820 Msa0523440:CDS
TTTGAGTTTAAGACTCATTT+GGG 0.363096 3_4:+76783002 Msa0523440:CDS
AAAGATGCTGCAAAGAATAT+TGG 0.364050 3_4:+76784931 Msa0523440:CDS
GAGTTGGTGGCGGGTTTGCC+TGG 0.366616 3_4:+76783308 Msa0523440:CDS
CACCTGATGTTCGATTCTTC+AGG 0.370588 3_4:+76783363 Msa0523440:CDS
AGGGTGGTTCCTGATAAATT+TGG 0.376289 3_4:-76785977 None:intergenic
GAGACGAGAAAACCCGGTTT+AGG 0.376446 3_4:+76786416 Msa0523440:CDS
TCTTTGACCCTTCATTCTCT+TGG 0.378297 3_4:+76782853 Msa0523440:CDS
GTGAAGGGGTTAGTAGGTTG+TGG 0.382908 3_4:+76783024 Msa0523440:CDS
TTTGCCTGGTCGAGTTTATA+GGG 0.385793 3_4:+76783322 Msa0523440:CDS
CAAGAGGATGGCTGTCTCAT+TGG 0.386966 3_4:+76784675 Msa0523440:CDS
GTGGGTCTCTTGCATCCAAC+AGG 0.388191 3_4:+76784138 Msa0523440:CDS
TTCCAGCGAAATATTGTCTA+AGG 0.388915 3_4:-76784903 None:intergenic
TTAATAGGTCAAGGTGTTGC+CGG 0.393576 3_4:+76784286 Msa0523440:CDS
CATAGAGTAAAAGTTACATT+TGG 0.399282 3_4:+76786394 Msa0523440:CDS
ACAACACAGCAGAGCAACTA+TGG 0.400513 3_4:+76783503 Msa0523440:CDS
GAGTGTTCTCCTTCCGTTGA+GGG 0.401877 3_4:+76784799 Msa0523440:CDS
CCATAACAGAGAAGCTGATA+AGG 0.402380 3_4:+76783084 Msa0523440:CDS
AGTGGATCAAAGATTTCAAT+AGG 0.403479 3_4:+76783114 Msa0523440:CDS
AGTTATAACAAATAAGGAAT+TGG 0.408257 3_4:+76784567 Msa0523440:CDS
CGGCTTTCCTGTTCAGTACA+TGG 0.410252 3_4:-76782939 None:intergenic
GGTTTAGGTTGCCAAAGAAT+TGG 0.416151 3_4:+76786431 Msa0523440:CDS
CTCGGGTAGTGCGGTTTCAT+AGG 0.417672 3_4:-76784059 None:intergenic
GAAATCTTTGATCCACTTGA+GGG 0.419150 3_4:-76783108 None:intergenic
GTCTGGTAACAAAGATTCAT+TGG 0.422317 3_4:+76786177 Msa0523440:CDS
TGCTCGTTGTTCTCCAAGGC+AGG 0.422575 3_4:-76782876 None:intergenic
GAGAATGAAGGGTCAAAGAT+TGG 0.423559 3_4:-76782849 None:intergenic
AGATCATTAGCTCTCAGAAT+TGG 0.423575 3_4:-76783191 None:intergenic
AACAATGTCTAGAAAGTTCT+CGG 0.424847 3_4:+76784720 Msa0523440:CDS
ATTTGGGTGAAGGGGTTAGT+AGG 0.424980 3_4:+76783018 Msa0523440:CDS
TGGAGCTTCCATCATGGTAT+TGG 0.425349 3_4:-76782706 None:intergenic
GATATCTCACAGAGATTTCT+CGG 0.426588 3_4:-76783256 None:intergenic
CAAGGGAGCAGGACATGTTT+GGG 0.427327 3_4:+76783461 Msa0523440:CDS
TGCTCCTCCATGTACTGAAC+AGG 0.433075 3_4:+76782932 Msa0523440:CDS
CTCGTCATTGACTCGGTTCA+AGG 0.434191 3_4:+76785896 Msa0523440:CDS
GGGCTCAACGAATCGGGATC+TGG 0.434923 3_4:-76786049 None:intergenic
TAATAGGTCAAGGTGTTGCC+GGG 0.435218 3_4:+76784287 Msa0523440:CDS
ACCTTCAGGGCTCAACGAAT+CGG 0.436452 3_4:-76786056 None:intergenic
TGGTTGGAAGCTTCTGCTGA+TGG 0.437275 3_4:+76782789 Msa0523440:CDS
ACACGGAACATTAGCGGTTC+CGG 0.438801 3_4:+76783430 Msa0523440:CDS
CTCGTGCCGAACATCATTGC+CGG 0.439855 3_4:-76782901 None:intergenic
GTTGTTGATCTCAGCAGCTC+TGG 0.440941 3_4:+76783914 Msa0523440:CDS
TTGCTATGTTGGTGATTCTT+CGG 0.441455 3_4:+76784225 Msa0523440:CDS
CTATCATCCCCTCTATTAAC+CGG 0.442227 3_4:-76783167 None:intergenic
TTGTAATTTACAATCACAAA+AGG 0.447067 3_4:-76786685 None:intergenic
ATTGTCCATGATTATTCAAA+GGG 0.447950 3_4:+76784528 Msa0523440:CDS
ATTTGGACGATGATTATGAA+TGG 0.449463 3_4:+76786527 Msa0523440:CDS
CTCAGAACCTCTTGAATCTC+GGG 0.451350 3_4:-76784076 None:intergenic
GGCTGTATGCTTAATGAGAC+TGG 0.451702 3_4:-76786028 None:intergenic
AGATATGCTTATACAAATAT+GGG 0.453741 3_4:+76783142 Msa0523440:CDS
CCTTCAGGGCTCAACGAATC+GGG 0.455000 3_4:-76786055 None:intergenic
GACTCAAAGGAGTTGGTGGC+GGG 0.455558 3_4:+76783299 Msa0523440:CDS
GGAACATGAATGGCTTGAAT+AGG 0.455976 3_4:-76786116 None:intergenic
TGCAAACAGTCTCAAGTTCA+CGG 0.457700 3_4:-76783526 None:intergenic
CTGAGATACTATAGATGCTT+CGG 0.458538 3_4:-76784432 None:intergenic
CAGCATTATTAACTATAATC+CGG 0.460364 3_4:-76782959 None:intergenic
CATTGTCCATGATTATTCAA+AGG 0.467851 3_4:+76784527 Msa0523440:CDS
GATCCACCAGGTCCTGGATT+AGG 0.474573 3_4:-76783059 None:intergenic
AGCAACCCGGCAATGATGTT+CGG 0.474729 3_4:+76782895 Msa0523440:CDS
TGCATCCAACAGGGAAAAGA+TGG 0.475400 3_4:+76784148 Msa0523440:CDS
TCACTGTCATTGCAATCTAC+AGG 0.475999 3_4:-76784481 None:intergenic
GAGGAGATGTTGACTGTGGT+AGG 0.478292 3_4:+76784776 Msa0523440:CDS
TAGAAGAAGCATACCCATCA+TGG 0.480856 3_4:+76782653 Msa0523440:exon
ACCACAAGATGAAAATTCAA+TGG 0.483142 3_4:+76782728 Msa0523440:CDS
TGCAGCACCATCTCCCATGA+TGG 0.484116 3_4:-76782667 None:intergenic
GAGACCCACGTCTGAGCTAA+AGG 0.485407 3_4:-76784124 None:intergenic
ATGTTGGTGATTCTTCGGTC+AGG 0.486077 3_4:+76784230 Msa0523440:CDS
GTGTTGTTGCTCTGACAAGC+TGG 0.486344 3_4:-76786137 None:intergenic
ATATGGGTGCCGGTTAATAG+AGG 0.486599 3_4:+76783158 Msa0523440:CDS
CGGTTAATAGAGGGGATGAT+AGG 0.488453 3_4:+76783168 Msa0523440:CDS
CATAACAGAGAAGCTGATAA+GGG 0.488496 3_4:+76783085 Msa0523440:CDS
CTCCTGAAGAATCGAACATC+AGG 0.489431 3_4:-76783365 None:intergenic
AGGAGAGAAAAGACGGGCCA+AGG 0.490415 3_4:+76784855 Msa0523440:CDS
GTCCTTAGACAATATTTCGC+TGG 0.494295 3_4:+76784901 Msa0523440:CDS
TCTTAAACTCAAACTGCTGC+AGG 0.496219 3_4:-76782992 None:intergenic
TTTGGACGATGATTATGAAT+GGG 0.496780 3_4:+76786528 Msa0523440:CDS
GTGATTTCGATGCACCTTCA+GGG 0.498166 3_4:-76786069 None:intergenic
GGTAACAAAGATTCATTGGT+TGG 0.498700 3_4:+76786181 Msa0523440:CDS
GCACACCCTTTGAATAATCA+TGG 0.498968 3_4:-76784533 None:intergenic
ATGGAAGATCCACCAGGTCC+TGG 0.499029 3_4:-76783065 None:intergenic
TGAAGGGTCAAAGATTGGAT+TGG 0.499145 3_4:-76782844 None:intergenic
CACACAAACAATGTTGCGTC+TGG 0.501686 3_4:+76786160 Msa0523440:CDS
TCTCAGAACCTCTTGAATCT+CGG 0.503095 3_4:-76784077 None:intergenic
GGACTCAAAGGAGTTGGTGG+CGG 0.508229 3_4:+76783298 Msa0523440:CDS
CAACTCTGAAAAGGATCTGC+AGG 0.508919 3_4:+76785804 Msa0523440:CDS
CCCGATTCGTTGAGCCCTGA+AGG 0.511003 3_4:+76786055 Msa0523440:CDS
AGGAGATGTTGACTGTGGTA+GGG 0.511843 3_4:+76784777 Msa0523440:CDS
AGTTTGGGAGTAAATAGAAC+AGG 0.512927 3_4:+76784835 Msa0523440:CDS
CTGACAAGCTGGAACATGAA+TGG 0.515320 3_4:-76786126 None:intergenic
TCTGTACTACAACTCTGAAA+AGG 0.515505 3_4:+76785795 Msa0523440:CDS
CACTCGCAAAGCGTCTCAAA+AGG 0.517406 3_4:+76786363 Msa0523440:CDS
GGGTTGCTCGTTGTTCTCCA+AGG 0.518849 3_4:-76782880 None:intergenic
GGGTTGCAGACAAAGTTTGA+TGG 0.518963 3_4:-76786617 None:intergenic
CGGATTATAGTTAATAATGC+TGG 0.519737 3_4:+76782960 Msa0523440:CDS
TTAAGACTCATTTGGGTGAA+GGG 0.525792 3_4:+76783009 Msa0523440:CDS
AGATTTCTCGGTACTTTGCA+AGG 0.526853 3_4:-76783244 None:intergenic
ATCCACTGTCTCATCATGCC+AGG 0.527462 3_4:+76784374 Msa0523440:CDS
TTTAAGACTCATTTGGGTGA+AGG 0.528588 3_4:+76783008 Msa0523440:CDS
CGGTGTTTGAACAAGGGAGC+AGG 0.529135 3_4:+76783450 Msa0523440:CDS
TGAAATCTTTGATCCACTTG+AGG 0.531373 3_4:-76783109 None:intergenic
GCGGTTCCGGTGTTTGAACA+AGG 0.534054 3_4:+76783443 Msa0523440:CDS
GTGGAGTATGCTTGCTATGT+TGG 0.534634 3_4:+76784214 Msa0523440:CDS
GGTCCTGGATTAGGCGTTGG+TGG 0.534809 3_4:-76783050 None:intergenic
AAGGCAGGCCAAGAGAATGA+AGG 0.539487 3_4:-76782861 None:intergenic
GCTTATACAAATATGGGTGC+CGG 0.542004 3_4:+76783148 Msa0523440:CDS
AACAGGGAAAAGATGGCTGC+CGG 0.543888 3_4:+76784155 Msa0523440:CDS
AGCTGATAAGGGCCCTCAAG+TGG 0.545368 3_4:+76783096 Msa0523440:CDS
ACTCGGTTCAAGGTGCCTCT+GGG 0.547073 3_4:+76785906 Msa0523440:CDS
TGTAATTATCATCAGAGTGC+CGG 0.547779 3_4:-76784174 None:intergenic
TAATAAGGACTTGCGATACT+CGG 0.548860 3_4:-76786335 None:intergenic
CATGCCAAGATCACAAAGCC+AGG 0.549068 3_4:+76786288 Msa0523440:CDS
TGCTGCAGATGTAATTCAGT+CGG 0.549867 3_4:+76784642 Msa0523440:CDS
CCAGGTCCTGGATTAGGCGT+TGG 0.550312 3_4:-76783053 None:intergenic
GGAGGACTCAAAGGAGTTGG+TGG 0.551490 3_4:+76783295 Msa0523440:CDS
ATTCTTTGGCAACCTAAACC+GGG 0.552603 3_4:-76786428 None:intergenic
TTTGTTAGATGGTTGTTGGT+TGG 0.554167 3_4:+76782773 Msa0523440:CDS
CTTATCATCTAATGAAGTGA+TGG 0.555317 3_4:+76784600 Msa0523440:CDS
CTCTTGAATCTCGGGTAGTG+CGG 0.556527 3_4:-76784068 None:intergenic
TGCAGAGGTGGAGGACTCAA+AGG 0.557266 3_4:+76783286 Msa0523440:CDS
ATTCCACCAACGCCTAATCC+AGG 0.557897 3_4:+76783047 Msa0523440:CDS
CATTTGGAGACGAGAAAACC+CGG 0.558546 3_4:+76786410 Msa0523440:CDS
TAAATGTTTCAGCTACCAAA+CGG 0.559360 3_4:-76782577 None:intergenic
TAAGACTCATTTGGGTGAAG+GGG 0.560800 3_4:+76783010 Msa0523440:CDS
GTTTGTCATAAAAGCACCCC+CGG 0.561641 3_4:-76784305 None:intergenic
GGTGGAGGACTCAAAGGAGT+TGG 0.562364 3_4:+76783292 Msa0523440:CDS
TTACACACACTGTATATCTC+CGG 0.564968 3_4:+76784192 Msa0523440:CDS
TCGTGCCGAACATCATTGCC+GGG 0.569558 3_4:-76782900 None:intergenic
CTTGCTTAAAGAAGTAATGT+CGG 0.569630 3_4:-76784344 None:intergenic
ATCTTGTGCAGGAAATTGCT+AGG 0.569881 3_4:+76786464 Msa0523440:CDS
GATGCTGCAAAGAATATTGG+CGG 0.571710 3_4:+76784934 Msa0523440:CDS
GACTGTTTGCAAAGCGCTAG+AGG 0.574356 3_4:+76783538 Msa0523440:CDS
TTGTGGTGGAGCTTCCATCA+TGG 0.576729 3_4:-76782712 None:intergenic
AGACAGCCATCCTCTTGTGT+TGG 0.577568 3_4:-76784669 None:intergenic
ATCTGCAACCAATACCATGA+TGG 0.578563 3_4:+76782698 Msa0523440:CDS
GGCAACACGGTATTAAGCGT+TGG 0.579088 3_4:+76785825 Msa0523440:CDS
GTGTTATGAAGATCTTGTGC+AGG 0.580834 3_4:+76786453 Msa0523440:CDS
AGCATACCCATCATGGGAGA+TGG 0.583903 3_4:+76782660 Msa0523440:exon
ATAGAACAGGAGAGAAAAGA+CGG 0.585692 3_4:+76784848 Msa0523440:CDS
CATGTACTGAACAGGAAAGC+CGG 0.586722 3_4:+76782940 Msa0523440:CDS
CATCACTTGTTAATAGGTCA+AGG 0.586973 3_4:+76784277 Msa0523440:CDS
TGTCGGTTGAGAAGCACGGT+TGG 0.589014 3_4:-76784327 None:intergenic
CGGTTCCGGTGTTTGAACAA+GGG 0.589544 3_4:+76783444 Msa0523440:CDS
CGAACATCAGGTGTCCACTC+AGG 0.589765 3_4:-76783353 None:intergenic
TATGGGTGCCGGTTAATAGA+GGG 0.590546 3_4:+76783159 Msa0523440:CDS
TCACAAAGCCAGGAAACACT+TGG 0.593082 3_4:+76786298 Msa0523440:CDS
AGGATGGCTGTCTCATTGGA+TGG 0.593239 3_4:+76784679 Msa0523440:CDS
ACTCCTGATAAAATTACTGG+AGG 0.593662 3_4:-76786638 None:intergenic
AGGCAGGCCAAGAGAATGAA+GGG 0.595697 3_4:-76782860 None:intergenic
TTGTTATAACTCGCAAGCTG+CGG 0.597685 3_4:-76784555 None:intergenic
AGCTCGCAATCCAAACAACC+TGG 0.599497 3_4:-76784392 None:intergenic
GGAAGTCTGACTACATGAAG+AGG 0.601423 3_4:-76786095 None:intergenic
ACTTCAACTCGTCATTGACT+CGG 0.601900 3_4:+76785889 Msa0523440:CDS
AATAGGTCAAGGTGTTGCCG+GGG 0.604344 3_4:+76784288 Msa0523440:CDS
AGAAGAAGCATACCCATCAT+GGG 0.605534 3_4:+76782654 Msa0523440:exon
CTCCTGATAAAATTACTGGA+GGG 0.605907 3_4:-76786637 None:intergenic
GCAGCACCATCTCCCATGAT+GGG 0.606072 3_4:-76782666 None:intergenic
CTAGAAAGTTCTCGGAACAA+AGG 0.606403 3_4:+76784728 Msa0523440:CDS
CAGACGCAACATTGTTTGTG+TGG 0.607061 3_4:-76786159 None:intergenic
TTATCCCTATAAACTCGACC+AGG 0.609566 3_4:-76783326 None:intergenic
AGCAAATCCAATATCAGCAA+CGG 0.611864 3_4:-76784623 None:intergenic
GGAGTGTTCTCCTTCCGTTG+AGG 0.611994 3_4:+76784798 Msa0523440:CDS
CCAACGCCTAATCCAGGACC+TGG 0.614235 3_4:+76783053 Msa0523440:CDS
CTGCTCCCTTGTTCAAACAC+CGG 0.615580 3_4:-76783449 None:intergenic
TGATGTACACGGAACATTAG+CGG 0.615722 3_4:+76783424 Msa0523440:CDS
TCTGTTATGGAAGATCCACC+AGG 0.616650 3_4:-76783071 None:intergenic
AATTGCCTTTAGCTCAGACG+TGG 0.620316 3_4:+76784119 Msa0523440:CDS
TGACAAGAAGTTACCCTCAA+CGG 0.620322 3_4:-76784812 None:intergenic
TCGCAAAGCGTCTCAAAAGG+AGG 0.621421 3_4:+76786366 Msa0523440:CDS
TTGGAGAACAACGAGCAACC+CGG 0.622537 3_4:+76782882 Msa0523440:CDS
ATAGATGCTTCGGAGTCGAA+TGG 0.625235 3_4:-76784422 None:intergenic
ATGATTCACATGCATGACAA+AGG 0.628676 3_4:-76786711 None:intergenic
AGTCGGAACTCCAACACAAG+AGG 0.629939 3_4:+76784659 Msa0523440:CDS
GACGAGTTGAAGTTTCTGCA+AGG 0.629978 3_4:-76785879 None:intergenic
TTCTAGTATATAATAAGGAT+AGG 0.630264 3_4:-76786864 None:intergenic
ATTCAGAGTTGAGATTAGGG+TGG 0.634639 3_4:-76785993 None:intergenic
ACATAGCAAGCATACTCCAC+CGG 0.635320 3_4:-76784211 None:intergenic
GTACATCACACTCTTGAGCA+TGG 0.639396 3_4:-76783409 None:intergenic
GCTCAAGAGTGTGATGTACA+CGG 0.639508 3_4:+76783413 Msa0523440:CDS
CATCTTATGATAAAAGGACA+AGG 0.639708 3_4:+76782543 Msa0523440:five_prime_UTR
TCTTGAGCATGGTCAACTCG+TGG 0.640513 3_4:-76783398 None:intergenic
CGCACTACCCGAGATTCAAG+AGG 0.642440 3_4:+76784069 Msa0523440:CDS
GTCTGACTACATGAAGAGGA+AGG 0.643172 3_4:-76786091 None:intergenic
AAGAAGTTACCCTCAACGGA+AGG 0.646367 3_4:-76784808 None:intergenic
TAGAACAGGAGAGAAAAGAC+GGG 0.649215 3_4:+76784849 Msa0523440:CDS
GGAACTCCAACACAAGAGGA+TGG 0.651641 3_4:+76784663 Msa0523440:CDS
AAAAGGATCTGCAGGCAACA+CGG 0.653871 3_4:+76785812 Msa0523440:CDS
CTTTCCTGTTCAGTACATGG+AGG 0.656242 3_4:-76782936 None:intergenic
GAAAGTTCTCGGAACAAAGG+CGG 0.656927 3_4:+76784731 Msa0523440:CDS
CACACACTGTATATCTCCGG+TGG 0.659877 3_4:+76784195 Msa0523440:CDS
ATTGCCTTTAGCTCAGACGT+GGG 0.661550 3_4:+76784120 Msa0523440:CDS
ATAGGTCAAGGTGTTGCCGG+GGG 0.662191 3_4:+76784289 Msa0523440:CDS
TTCAAGTCTTCAGAATGTGA+AGG 0.663202 3_4:+76783940 Msa0523440:CDS
ATGTTTGGGAGTTATTGAAG+TGG 0.676259 3_4:+76783475 Msa0523440:CDS
TTAAGAGGAGATGTTGACTG+TGG 0.679381 3_4:+76784772 Msa0523440:CDS
ATGGGTGCCGGTTAATAGAG+GGG 0.680121 3_4:+76783160 Msa0523440:CDS
TGGGTCTCTTGCATCCAACA+GGG 0.683646 3_4:+76784139 Msa0523440:CDS
ACGCCTAATCCAGGACCTGG+TGG 0.693296 3_4:+76783056 Msa0523440:CDS
GTAATGTCGGTTGAGAAGCA+CGG 0.695561 3_4:-76784331 None:intergenic
ATCAATTTGAAATGACCCAG+AGG 0.697023 3_4:-76785921 None:intergenic
AACCTGGCATGATGAGACAG+TGG 0.699432 3_4:-76784376 None:intergenic
ATAGGGATAAGATTCCTGAG+TGG 0.764696 3_4:+76783339 Msa0523440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAATTTGATTTCAT+TGG - chr3_4:76782046-76782065 None:intergenic 10.0%
!!! AAAAAAAAAAAATGGAATTT+TGG - chr3_4:76786783-76786802 None:intergenic 10.0%
!!! AATTCCATTTTTTTTTTTTT+TGG + chr3_4:76786784-76786803 Msa0523440:three_prime_UTR 10.0%
!! ATAAAAATAAAATACATGGT+TGG + chr3_4:76782060-76782079 Msa0523440:five_prime_UTR 15.0%
!! TAAAAATAAAATACATGGTT+GGG + chr3_4:76782061-76782080 Msa0523440:five_prime_UTR 15.0%
!! AAAGAGAATTTATTCAAAAA+AGG - chr3_4:76782296-76782315 None:intergenic 15.0%
!! AGTACAAAAAAATAATATAG+GGG - chr3_4:76785114-76785133 None:intergenic 15.0%
!! CAGTACAAAAAAATAATATA+GGG - chr3_4:76785115-76785134 None:intergenic 15.0%
!! TCAGTACAAAAAAATAATAT+AGG - chr3_4:76785116-76785135 None:intergenic 15.0%
!! ACATTATGTAAAACTTAATT+TGG - chr3_4:76785187-76785206 None:intergenic 15.0%
!!! TTTACATTTAATTCACTTTT+AGG + chr3_4:76785639-76785658 Msa0523440:intron 15.0%
!! CAAACCAAAAAAAAAAAAAA+TGG - chr3_4:76786791-76786810 None:intergenic 15.0%
!! TAAATTCTCTTTACGTTTAA+AGG + chr3_4:76782304-76782323 Msa0523440:intron 20.0%
!! ACAACGAATAATATGAAAAA+AGG - chr3_4:76782433-76782452 None:intergenic 20.0%
!! AAGATATGCTTATACAAATA+TGG + chr3_4:76783141-76783160 Msa0523440:CDS 20.0%
!! AGATATGCTTATACAAATAT+GGG + chr3_4:76783142-76783161 Msa0523440:CDS 20.0%
!!! TTTTAGAACAGTGAATTTAA+GGG + chr3_4:76783667-76783686 Msa0523440:intron 20.0%
!! TTATATTGAAATGTGTAACA+AGG - chr3_4:76783786-76783805 None:intergenic 20.0%
!! CATTTCAATATAAATGCTTA+TGG + chr3_4:76783793-76783812 Msa0523440:intron 20.0%
!! AGTTATAACAAATAAGGAAT+TGG + chr3_4:76784567-76784586 Msa0523440:CDS 20.0%
!!! TTTTTTTGTACTGAACATAT+AGG + chr3_4:76785122-76785141 Msa0523440:intron 20.0%
!!! TTTTACATAATGTGACTTAA+AGG + chr3_4:76785194-76785213 Msa0523440:intron 20.0%
!! TCTAACTTGAAATTAGAATT+TGG + chr3_4:76785573-76785592 Msa0523440:intron 20.0%
!! TTGATTTATTATCTTGAATC+AGG - chr3_4:76786264-76786283 None:intergenic 20.0%
!! CAAATTCGATATCAAATATT+TGG + chr3_4:76786510-76786529 Msa0523440:CDS 20.0%
!! TTGTAATTTACAATCACAAA+AGG - chr3_4:76786688-76786707 None:intergenic 20.0%
!!! TATTTTGTTACAACATTGTA+AGG + chr3_4:76786823-76786842 Msa0523440:three_prime_UTR 20.0%
! CCAGTAAATGAAAAAATGAA+AGG - chr3_4:76782144-76782163 None:intergenic 25.0%
!!! CCTTTCATTTTTTCATTTAC+TGG + chr3_4:76782141-76782160 Msa0523440:five_prime_UTR 25.0%
!! AGAGAATCTTTTTATGAGTA+TGG + chr3_4:76782209-76782228 Msa0523440:intron 25.0%
! TCATTCTATATAGTCAAAAG+AGG - chr3_4:76782374-76782393 None:intergenic 25.0%
! TTCTCACATCTTATGATAAA+AGG + chr3_4:76782537-76782556 Msa0523440:five_prime_UTR 25.0%
! CAGCATTATTAACTATAATC+CGG - chr3_4:76782962-76782981 None:intergenic 25.0%
!! TTTGAGTTTAAGACTCATTT+GGG + chr3_4:76783002-76783021 Msa0523440:CDS 25.0%
!!! TCTTTGTTTCAAGTTCTTTT+GGG - chr3_4:76783639-76783658 None:intergenic 25.0%
!!! TTCTTTGTTTCAAGTTCTTT+TGG - chr3_4:76783640-76783659 None:intergenic 25.0%
! AACTTGAAACAAAGAACTTA+TGG + chr3_4:76783644-76783663 Msa0523440:intron 25.0%
!!! GTTTTAGAACAGTGAATTTA+AGG + chr3_4:76783666-76783685 Msa0523440:intron 25.0%
!! ACTTTTACATATTGAATTGC+TGG + chr3_4:76783733-76783752 Msa0523440:intron 25.0%
! TTTGATGAGCTTTACATATA+TGG - chr3_4:76783838-76783857 None:intergenic 25.0%
!! TCAATACTAGTTTAATGATC+TGG + chr3_4:76783871-76783890 Msa0523440:intron 25.0%
!! CAATACTAGTTTAATGATCT+GGG + chr3_4:76783872-76783891 Msa0523440:intron 25.0%
!! AATACTAGTTTAATGATCTG+GGG + chr3_4:76783873-76783892 Msa0523440:intron 25.0%
!!! AAAATATAACCAGTTTGTTG+AGG - chr3_4:76784021-76784040 None:intergenic 25.0%
!! TCAACAAACTGGTTATATTT+TGG + chr3_4:76784020-76784039 Msa0523440:intron 25.0%
! ATTGTCCATGATTATTCAAA+GGG + chr3_4:76784528-76784547 Msa0523440:CDS 25.0%
!! TTTTCTATTGACATGCTAAA+TGG - chr3_4:76785015-76785034 None:intergenic 25.0%
! AAAATTGATGAGTAGAACAT+AGG - chr3_4:76785066-76785085 None:intergenic 25.0%
! AACAAAATCTTAAAGGACTA+CGG + chr3_4:76785231-76785250 Msa0523440:intron 25.0%
!!! TAAATTAGCTCTAACGTTTA+AGG + chr3_4:76785447-76785466 Msa0523440:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr3_4:76785529-76785548 Msa0523440:intron 25.0%
! AATGTAAAACAATAAACCCA+TGG - chr3_4:76785627-76785646 None:intergenic 25.0%
! GAAAAATTCAATTCAACAGA+TGG - chr3_4:76785773-76785792 None:intergenic 25.0%
! TTCCTTCTATTCAAAATTCT+CGG + chr3_4:76785943-76785962 Msa0523440:CDS 25.0%
!!! TTTGCGAGTGTTTTTTAATA+AGG - chr3_4:76786353-76786372 None:intergenic 25.0%
! CATAGAGTAAAAGTTACATT+TGG + chr3_4:76786394-76786413 Msa0523440:CDS 25.0%
GCAACGAATAAAAAGATTCT+CGG - chr3_4:76782092-76782111 None:intergenic 30.0%
!!! TATGGCTATTACACTTTTTC+TGG + chr3_4:76782227-76782246 Msa0523440:intron 30.0%
TCTAAATTCACTGAAGCAAA+AGG - chr3_4:76782269-76782288 None:intergenic 30.0%
ACTGACATCATTAACAACTT+TGG + chr3_4:76782505-76782524 Msa0523440:intron 30.0%
CATCTTATGATAAAAGGACA+AGG + chr3_4:76782543-76782562 Msa0523440:five_prime_UTR 30.0%
TAAATGTTTCAGCTACCAAA+CGG - chr3_4:76782580-76782599 None:intergenic 30.0%
! ATTGAATTTTCATCTTGTGG+TGG - chr3_4:76782729-76782748 None:intergenic 30.0%
ACCACAAGATGAAAATTCAA+TGG + chr3_4:76782728-76782747 Msa0523440:CDS 30.0%
! TCCATTGAATTTTCATCTTG+TGG - chr3_4:76782732-76782751 None:intergenic 30.0%
! ATGAGTGAACTTTTGTTAGA+TGG + chr3_4:76782762-76782781 Msa0523440:CDS 30.0%
! AACTTTTGTTAGATGGTTGT+TGG + chr3_4:76782769-76782788 Msa0523440:CDS 30.0%
! TCAAAGATTGGATTGGAAAA+AGG - chr3_4:76782840-76782859 None:intergenic 30.0%
CGGATTATAGTTAATAATGC+TGG + chr3_4:76782960-76782979 Msa0523440:CDS 30.0%
! GTTTGAGTTTAAGACTCATT+TGG + chr3_4:76783001-76783020 Msa0523440:CDS 30.0%
AGTGGATCAAAGATTTCAAT+AGG + chr3_4:76783114-76783133 Msa0523440:CDS 30.0%
!! TTCCTTTTTCACTTGAATCA+AGG + chr3_4:76783213-76783232 Msa0523440:CDS 30.0%
!! GCATAGAGTTTTTGTTTGTT+TGG + chr3_4:76783580-76783599 Msa0523440:intron 30.0%
!!! GTCATTTTTTACAACACACA+AGG + chr3_4:76783604-76783623 Msa0523440:intron 30.0%
GGAGCAATTTAATCATAAGA+GGG - chr3_4:76783765-76783784 None:intergenic 30.0%
AGGAGCAATTTAATCATAAG+AGG - chr3_4:76783766-76783785 None:intergenic 30.0%
ATGTAAAGCTCATCAAAAGT+CGG + chr3_4:76783841-76783860 Msa0523440:intron 30.0%
TACATAGAAAATCATCTCTG+TGG + chr3_4:76783963-76783982 Msa0523440:intron 30.0%
CTTGCTTAAAGAAGTAATGT+CGG - chr3_4:76784347-76784366 None:intergenic 30.0%
CATTGTCCATGATTATTCAA+AGG + chr3_4:76784527-76784546 Msa0523440:CDS 30.0%
CTTGCGAGTTATAACAAATA+AGG + chr3_4:76784561-76784580 Msa0523440:CDS 30.0%
CTTATCATCTAATGAAGTGA+TGG + chr3_4:76784600-76784619 Msa0523440:CDS 30.0%
AACAATGTCTAGAAAGTTCT+CGG + chr3_4:76784720-76784739 Msa0523440:CDS 30.0%
CAAGAAAGTCTTACTTTAAG+AGG + chr3_4:76784757-76784776 Msa0523440:CDS 30.0%
AAAGATGCTGCAAAGAATAT+TGG + chr3_4:76784931-76784950 Msa0523440:CDS 30.0%
!! ATTTTTGTTTGCAAACACCA+AGG + chr3_4:76784987-76785006 Msa0523440:intron 30.0%
GAGACAGAACAAAATCTTAA+AGG + chr3_4:76785224-76785243 Msa0523440:intron 30.0%
!! ATGAGGTTTTGCTATATGTT+TGG - chr3_4:76785302-76785321 None:intergenic 30.0%
AAACATATAGCAAAACCTCA+TGG + chr3_4:76785301-76785320 Msa0523440:intron 30.0%
ATGAGCATATTTGCCTATTT+GGG - chr3_4:76785349-76785368 None:intergenic 30.0%
!!! TACAGTTGATTTTTAGCCAT+GGG + chr3_4:76785608-76785627 Msa0523440:intron 30.0%
! ATCCGAGAATTTTGAATAGA+AGG - chr3_4:76785948-76785967 None:intergenic 30.0%
TTGATTCAGAGTTGAGATTA+GGG - chr3_4:76785999-76786018 None:intergenic 30.0%
TCTTCATAACACCAATTCTT+TGG - chr3_4:76786445-76786464 None:intergenic 30.0%
ATTTGGACGATGATTATGAA+TGG + chr3_4:76786527-76786546 Msa0523440:CDS 30.0%
TTTGGACGATGATTATGAAT+GGG + chr3_4:76786528-76786547 Msa0523440:CDS 30.0%
AGAACTCCTGATAAAATTAC+TGG - chr3_4:76786644-76786663 None:intergenic 30.0%
! GCAAGTGTGTGTGTATATTT+TGG + chr3_4:76782182-76782201 Msa0523440:five_prime_UTR 35.0%
!! AGTGTGTGTGTATATTTTGG+TGG + chr3_4:76782185-76782204 Msa0523440:five_prime_UTR 35.0%
!! AAGGATTTTTCAGATCCGTT+TGG + chr3_4:76782562-76782581 Msa0523440:five_prime_UTR 35.0%
!!! GTAACAAGCTAGTTCTGTTT+TGG + chr3_4:76782609-76782628 Msa0523440:five_prime_UTR 35.0%
!!! AAGCTAGTTCTGTTTTGGTT+TGG + chr3_4:76782614-76782633 Msa0523440:five_prime_UTR 35.0%
TTTGTTAGATGGTTGTTGGT+TGG + chr3_4:76782773-76782792 Msa0523440:CDS 35.0%
! TTTAAGACTCATTTGGGTGA+AGG + chr3_4:76783008-76783027 Msa0523440:CDS 35.0%
TTAAGACTCATTTGGGTGAA+GGG + chr3_4:76783009-76783028 Msa0523440:CDS 35.0%
CATAACAGAGAAGCTGATAA+GGG + chr3_4:76783085-76783104 Msa0523440:CDS 35.0%
GAAATCTTTGATCCACTTGA+GGG - chr3_4:76783111-76783130 None:intergenic 35.0%
TGAAATCTTTGATCCACTTG+AGG - chr3_4:76783112-76783131 None:intergenic 35.0%
! AGATCATTAGCTCTCAGAAT+TGG - chr3_4:76783194-76783213 None:intergenic 35.0%
GACCTTGATTCAAGTGAAAA+AGG - chr3_4:76783218-76783237 None:intergenic 35.0%
GATATCTCACAGAGATTTCT+CGG - chr3_4:76783259-76783278 None:intergenic 35.0%
ATGTTTGGGAGTTATTGAAG+TGG + chr3_4:76783475-76783494 Msa0523440:CDS 35.0%
AAACTCTATGCAAACAAGCA+AGG - chr3_4:76783571-76783590 None:intergenic 35.0%
TTCAAGTCTTCAGAATGTGA+AGG + chr3_4:76783940-76783959 Msa0523440:CDS 35.0%
TCTCAATTTCCTCAACAAAC+TGG + chr3_4:76784009-76784028 Msa0523440:intron 35.0%
!!! CAAACTGGTTATATTTTGGC+AGG + chr3_4:76784024-76784043 Msa0523440:intron 35.0%
TGTAATTATCATCAGAGTGC+CGG - chr3_4:76784177-76784196 None:intergenic 35.0%
TTACACACACTGTATATCTC+CGG + chr3_4:76784192-76784211 Msa0523440:CDS 35.0%
!! TTGCTATGTTGGTGATTCTT+CGG + chr3_4:76784225-76784244 Msa0523440:CDS 35.0%
! ATGGAGCATCACTTGTTAAT+AGG + chr3_4:76784271-76784290 Msa0523440:CDS 35.0%
! CATCACTTGTTAATAGGTCA+AGG + chr3_4:76784277-76784296 Msa0523440:CDS 35.0%
CTGAGATACTATAGATGCTT+CGG - chr3_4:76784435-76784454 None:intergenic 35.0%
AGCAAATCCAATATCAGCAA+CGG - chr3_4:76784626-76784645 None:intergenic 35.0%
GGTAACTTCTTGTCAAGTTT+GGG + chr3_4:76784820-76784839 Msa0523440:CDS 35.0%
AGTTTGGGAGTAAATAGAAC+AGG + chr3_4:76784835-76784854 Msa0523440:CDS 35.0%
ATAGAACAGGAGAGAAAAGA+CGG + chr3_4:76784848-76784867 Msa0523440:CDS 35.0%
TTCCAGCGAAATATTGTCTA+AGG - chr3_4:76784906-76784925 None:intergenic 35.0%
AGATAGAATGCTTGTGTGTA+AGG - chr3_4:76784964-76784983 None:intergenic 35.0%
TATAGGGGAACGAAACATTA+AGG - chr3_4:76785099-76785118 None:intergenic 35.0%
AAAATACATCCTGCAGACTA+CGG - chr3_4:76785278-76785297 None:intergenic 35.0%
TCCCTTAATGTTTCCCAAAT+AGG + chr3_4:76785333-76785352 Msa0523440:intron 35.0%
GCCTATTTGGGAAACATTAA+GGG - chr3_4:76785337-76785356 None:intergenic 35.0%
TGCCTATTTGGGAAACATTA+AGG - chr3_4:76785338-76785357 None:intergenic 35.0%
CATGAGCATATTTGCCTATT+TGG - chr3_4:76785350-76785369 None:intergenic 35.0%
GCTCATGTAATAAAACCTCA+TGG + chr3_4:76785363-76785382 Msa0523440:intron 35.0%
TGTAATAAAACCTCATGGTC+TGG + chr3_4:76785368-76785387 Msa0523440:intron 35.0%
AGAGAACAGAACTACATGAA+GGG - chr3_4:76785399-76785418 None:intergenic 35.0%
TGGCTAAAAATCAACTGTAG+AGG - chr3_4:76785607-76785626 None:intergenic 35.0%
!!! CTACAGTTGATTTTTAGCCA+TGG + chr3_4:76785607-76785626 Msa0523440:intron 35.0%
ATGAGACACTTGCATTTGTT+TGG - chr3_4:76785706-76785725 None:intergenic 35.0%
! TCTGTACTACAACTCTGAAA+AGG + chr3_4:76785795-76785814 Msa0523440:CDS 35.0%
!!! ACCTTTTTTATCTTCCGAGA+AGG - chr3_4:76785851-76785870 None:intergenic 35.0%
TCTCGGAAGATAAAAAAGGT+TGG + chr3_4:76785851-76785870 Msa0523440:CDS 35.0%
! ATCAATTTGAAATGACCCAG+AGG - chr3_4:76785924-76785943 None:intergenic 35.0%
CTATCGTCTCCAAATTTATC+AGG + chr3_4:76785968-76785987 Msa0523440:CDS 35.0%
CTTGATTCAGAGTTGAGATT+AGG - chr3_4:76786000-76786019 None:intergenic 35.0%
GTCTGGTAACAAAGATTCAT+TGG + chr3_4:76786177-76786196 Msa0523440:CDS 35.0%
GGTAACAAAGATTCATTGGT+TGG + chr3_4:76786181-76786200 Msa0523440:CDS 35.0%
TAATAAGGACTTGCGATACT+CGG - chr3_4:76786338-76786357 None:intergenic 35.0%
AATTCTTTGGCAACCTAAAC+CGG - chr3_4:76786432-76786451 None:intergenic 35.0%
AACTTGTGATGCAGATTTAG+AGG + chr3_4:76786558-76786577 Msa0523440:CDS 35.0%
! AACCCTCCAGTAATTTTATC+AGG + chr3_4:76786635-76786654 Msa0523440:CDS 35.0%
CTCCTGATAAAATTACTGGA+GGG - chr3_4:76786640-76786659 None:intergenic 35.0%
ACTCCTGATAAAATTACTGG+AGG - chr3_4:76786641-76786660 None:intergenic 35.0%
ATGATTCACATGCATGACAA+AGG - chr3_4:76786714-76786733 None:intergenic 35.0%
!!! TTCTGTTTTGGTTTGGCTTG+TGG + chr3_4:76782621-76782640 Msa0523440:five_prime_UTR 40.0%
! TAGAAGAAGCATACCCATCA+TGG + chr3_4:76782653-76782672 Msa0523440:exon 40.0%
! AGAAGAAGCATACCCATCAT+GGG + chr3_4:76782654-76782673 Msa0523440:exon 40.0%
ATCTGCAACCAATACCATGA+TGG + chr3_4:76782698-76782717 Msa0523440:CDS 40.0%
TGAAGGGTCAAAGATTGGAT+TGG - chr3_4:76782847-76782866 None:intergenic 40.0%
GAGAATGAAGGGTCAAAGAT+TGG - chr3_4:76782852-76782871 None:intergenic 40.0%
TCTTTGACCCTTCATTCTCT+TGG + chr3_4:76782853-76782872 Msa0523440:CDS 40.0%
TCTTAAACTCAAACTGCTGC+AGG - chr3_4:76782995-76783014 None:intergenic 40.0%
TAAGACTCATTTGGGTGAAG+GGG + chr3_4:76783010-76783029 Msa0523440:CDS 40.0%
CCTTATCAGCTTCTCTGTTA+TGG - chr3_4:76783087-76783106 None:intergenic 40.0%
CCATAACAGAGAAGCTGATA+AGG + chr3_4:76783084-76783103 Msa0523440:CDS 40.0%
GCTTATACAAATATGGGTGC+CGG + chr3_4:76783148-76783167 Msa0523440:CDS 40.0%
CTATCATCCCCTCTATTAAC+CGG - chr3_4:76783170-76783189 None:intergenic 40.0%
AGATTTCTCGGTACTTTGCA+AGG - chr3_4:76783247-76783266 None:intergenic 40.0%
! GAGATATCAGTTTTCTGCAG+AGG + chr3_4:76783271-76783290 Msa0523440:CDS 40.0%
! ATATCAGTTTTCTGCAGAGG+TGG + chr3_4:76783274-76783293 Msa0523440:CDS 40.0%
TTTGCCTGGTCGAGTTTATA+GGG + chr3_4:76783322-76783341 Msa0523440:CDS 40.0%
TTATCCCTATAAACTCGACC+AGG - chr3_4:76783329-76783348 None:intergenic 40.0%
ATAGGGATAAGATTCCTGAG+TGG + chr3_4:76783339-76783358 Msa0523440:CDS 40.0%
TGATGTACACGGAACATTAG+CGG + chr3_4:76783424-76783443 Msa0523440:CDS 40.0%
TGCAAACAGTCTCAAGTTCA+CGG - chr3_4:76783529-76783548 None:intergenic 40.0%
TCTCAGAACCTCTTGAATCT+CGG - chr3_4:76784080-76784099 None:intergenic 40.0%
!!! TTCGGTCAGGTTTTTTCATG+AGG + chr3_4:76784243-76784262 Msa0523440:CDS 40.0%
!!! GTTTTTTCATGAGGCTTGCA+TGG + chr3_4:76784252-76784271 Msa0523440:CDS 40.0%
!! TTAATAGGTCAAGGTGTTGC+CGG + chr3_4:76784286-76784305 Msa0523440:CDS 40.0%
TCACTGTCATTGCAATCTAC+AGG - chr3_4:76784484-76784503 None:intergenic 40.0%
GCACACCCTTTGAATAATCA+TGG - chr3_4:76784536-76784555 None:intergenic 40.0%
TTGTTATAACTCGCAAGCTG+CGG - chr3_4:76784558-76784577 None:intergenic 40.0%
TGCTGCAGATGTAATTCAGT+CGG + chr3_4:76784642-76784661 Msa0523440:CDS 40.0%
CTAGAAAGTTCTCGGAACAA+AGG + chr3_4:76784728-76784747 Msa0523440:CDS 40.0%
! TTAAGAGGAGATGTTGACTG+TGG + chr3_4:76784772-76784791 Msa0523440:CDS 40.0%
TGACAAGAAGTTACCCTCAA+CGG - chr3_4:76784815-76784834 None:intergenic 40.0%
GGGTAACTTCTTGTCAAGTT+TGG + chr3_4:76784819-76784838 Msa0523440:CDS 40.0%
TAGAACAGGAGAGAAAAGAC+GGG + chr3_4:76784849-76784868 Msa0523440:CDS 40.0%
! AGTGATAGTTTTCTCTGCCT+TGG - chr3_4:76784875-76784894 None:intergenic 40.0%
GTCCTTAGACAATATTTCGC+TGG + chr3_4:76784901-76784920 Msa0523440:CDS 40.0%
GATGCTGCAAAGAATATTGG+CGG + chr3_4:76784934-76784953 Msa0523440:CDS 40.0%
TGACATGCTAAATGGTACCT+TGG - chr3_4:76785007-76785026 None:intergenic 40.0%
CGGACAGTTAAGCAACTTAA+AGG + chr3_4:76785251-76785270 Msa0523440:intron 40.0%
TATAGCAAAACCTCATGGTC+TGG + chr3_4:76785306-76785325 Msa0523440:intron 40.0%
CAGAGAACAGAACTACATGA+AGG - chr3_4:76785400-76785419 None:intergenic 40.0%
! TGGTTCTGCAGTGACAAAAA+TGG - chr3_4:76785686-76785705 None:intergenic 40.0%
GCCTTCTCGGAAGATAAAAA+AGG + chr3_4:76785847-76785866 Msa0523440:CDS 40.0%
! ACTTCAACTCGTCATTGACT+CGG + chr3_4:76785889-76785908 Msa0523440:CDS 40.0%
AGGGTGGTTCCTGATAAATT+TGG - chr3_4:76785980-76785999 None:intergenic 40.0%
ATTCAGAGTTGAGATTAGGG+TGG - chr3_4:76785996-76786015 None:intergenic 40.0%
GGAACATGAATGGCTTGAAT+AGG - chr3_4:76786119-76786138 None:intergenic 40.0%
ATTCTTTGGCAACCTAAACC+GGG - chr3_4:76786431-76786450 None:intergenic 40.0%
!! GGTTTAGGTTGCCAAAGAAT+TGG + chr3_4:76786431-76786450 Msa0523440:CDS 40.0%
GTGTTATGAAGATCTTGTGC+AGG + chr3_4:76786453-76786472 Msa0523440:CDS 40.0%
ATCTTGTGCAGGAAATTGCT+AGG + chr3_4:76786464-76786483 Msa0523440:CDS 40.0%
TGGAGCTTCCATCATGGTAT+TGG - chr3_4:76782709-76782728 None:intergenic 45.0%
CTTTCCTGTTCAGTACATGG+AGG - chr3_4:76782939-76782958 None:intergenic 45.0%
CATGTACTGAACAGGAAAGC+CGG + chr3_4:76782940-76782959 Msa0523440:CDS 45.0%
! ATTTGGGTGAAGGGGTTAGT+AGG + chr3_4:76783018-76783037 Msa0523440:CDS 45.0%
TCTGTTATGGAAGATCCACC+AGG - chr3_4:76783074-76783093 None:intergenic 45.0%
!! ATATGGGTGCCGGTTAATAG+AGG + chr3_4:76783158-76783177 Msa0523440:CDS 45.0%
!! TATGGGTGCCGGTTAATAGA+GGG + chr3_4:76783159-76783178 Msa0523440:CDS 45.0%
CGGTTAATAGAGGGGATGAT+AGG + chr3_4:76783168-76783187 Msa0523440:CDS 45.0%
GTTTGCCTGGTCGAGTTTAT+AGG + chr3_4:76783321-76783340 Msa0523440:CDS 45.0%
CACCTGATGTTCGATTCTTC+AGG + chr3_4:76783363-76783382 Msa0523440:CDS 45.0%
CTCCTGAAGAATCGAACATC+AGG - chr3_4:76783368-76783387 None:intergenic 45.0%
GTACATCACACTCTTGAGCA+TGG - chr3_4:76783412-76783431 None:intergenic 45.0%
! GCTCAAGAGTGTGATGTACA+CGG + chr3_4:76783413-76783432 Msa0523440:CDS 45.0%
ACAACACAGCAGAGCAACTA+TGG + chr3_4:76783503-76783522 Msa0523440:CDS 45.0%
!! GGGGAAAGTTGTTAACTTGC+AGG + chr3_4:76783892-76783911 Msa0523440:intron 45.0%
CTCAGAACCTCTTGAATCTC+GGG - chr3_4:76784079-76784098 None:intergenic 45.0%
! AATTGCCTTTAGCTCAGACG+TGG + chr3_4:76784119-76784138 Msa0523440:CDS 45.0%
! ATTGCCTTTAGCTCAGACGT+GGG + chr3_4:76784120-76784139 Msa0523440:CDS 45.0%
TGCATCCAACAGGGAAAAGA+TGG + chr3_4:76784148-76784167 Msa0523440:CDS 45.0%
ACATAGCAAGCATACTCCAC+CGG - chr3_4:76784214-76784233 None:intergenic 45.0%
!! GTGGAGTATGCTTGCTATGT+TGG + chr3_4:76784214-76784233 Msa0523440:CDS 45.0%
!! ATGTTGGTGATTCTTCGGTC+AGG + chr3_4:76784230-76784249 Msa0523440:CDS 45.0%
!! TAATAGGTCAAGGTGTTGCC+GGG + chr3_4:76784287-76784306 Msa0523440:CDS 45.0%
!! GTTTGTCATAAAAGCACCCC+CGG - chr3_4:76784308-76784327 None:intergenic 45.0%
! GTAATGTCGGTTGAGAAGCA+CGG - chr3_4:76784334-76784353 None:intergenic 45.0%
TCTCATCATGCCAGGTTGTT+TGG + chr3_4:76784382-76784401 Msa0523440:CDS 45.0%
ATAGATGCTTCGGAGTCGAA+TGG - chr3_4:76784425-76784444 None:intergenic 45.0%
GAAAGTTCTCGGAACAAAGG+CGG + chr3_4:76784731-76784750 Msa0523440:CDS 45.0%
! AGGAGATGTTGACTGTGGTA+GGG + chr3_4:76784777-76784796 Msa0523440:CDS 45.0%
AAGAAGTTACCCTCAACGGA+AGG - chr3_4:76784811-76784830 None:intergenic 45.0%
! CAACTCTGAAAAGGATCTGC+AGG + chr3_4:76785804-76785823 Msa0523440:CDS 45.0%
AAAAGGATCTGCAGGCAACA+CGG + chr3_4:76785812-76785831 Msa0523440:CDS 45.0%
!! GTATTAAGCGTTGGCCTTCT+CGG + chr3_4:76785834-76785853 Msa0523440:CDS 45.0%
! GACGAGTTGAAGTTTCTGCA+AGG - chr3_4:76785882-76785901 None:intergenic 45.0%
GGCTGTATGCTTAATGAGAC+TGG - chr3_4:76786031-76786050 None:intergenic 45.0%
GTGATTTCGATGCACCTTCA+GGG - chr3_4:76786072-76786091 None:intergenic 45.0%
GTCTGACTACATGAAGAGGA+AGG - chr3_4:76786094-76786113 None:intergenic 45.0%
GGAAGTCTGACTACATGAAG+AGG - chr3_4:76786098-76786117 None:intergenic 45.0%
CTGACAAGCTGGAACATGAA+TGG - chr3_4:76786129-76786148 None:intergenic 45.0%
CAGACGCAACATTGTTTGTG+TGG - chr3_4:76786162-76786181 None:intergenic 45.0%
CACACAAACAATGTTGCGTC+TGG + chr3_4:76786160-76786179 Msa0523440:CDS 45.0%
!! GTTTCCTGGCTTTGTGATCT+TGG - chr3_4:76786295-76786314 None:intergenic 45.0%
TCACAAAGCCAGGAAACACT+TGG + chr3_4:76786298-76786317 Msa0523440:CDS 45.0%
! ACTTGCGATACTCGGTTTTC+GGG - chr3_4:76786330-76786349 None:intergenic 45.0%
! GACTTGCGATACTCGGTTTT+CGG - chr3_4:76786331-76786350 None:intergenic 45.0%
CATTTGGAGACGAGAAAACC+CGG + chr3_4:76786410-76786429 Msa0523440:CDS 45.0%
GGGTTGCAGACAAAGTTTGA+TGG - chr3_4:76786620-76786639 None:intergenic 45.0%
!! ATTAATAAAAATAAAATACA+TGG + chr3_4:76782056-76782075 Msa0523440:five_prime_UTR 5.0%
!!! TATAATCAATTATTTTTTTT+TGG - chr3_4:76785473-76785492 None:intergenic 5.0%
AGCATACCCATCATGGGAGA+TGG + chr3_4:76782660-76782679 Msa0523440:exon 50.0%
! TTGTGGTGGAGCTTCCATCA+TGG - chr3_4:76782715-76782734 None:intergenic 50.0%
TGGTTGGAAGCTTCTGCTGA+TGG + chr3_4:76782789-76782808 Msa0523440:CDS 50.0%
AGGCAGGCCAAGAGAATGAA+GGG - chr3_4:76782863-76782882 None:intergenic 50.0%
AAGGCAGGCCAAGAGAATGA+AGG - chr3_4:76782864-76782883 None:intergenic 50.0%
TTCATTCTCTTGGCCTGCCT+TGG + chr3_4:76782863-76782882 Msa0523440:CDS 50.0%
TTGGAGAACAACGAGCAACC+CGG + chr3_4:76782882-76782901 Msa0523440:CDS 50.0%
AGCAACCCGGCAATGATGTT+CGG + chr3_4:76782895-76782914 Msa0523440:CDS 50.0%
TGCTCCTCCATGTACTGAAC+AGG + chr3_4:76782932-76782951 Msa0523440:CDS 50.0%
CGGCTTTCCTGTTCAGTACA+TGG - chr3_4:76782942-76782961 None:intergenic 50.0%
! GTGAAGGGGTTAGTAGGTTG+TGG + chr3_4:76783024-76783043 Msa0523440:CDS 50.0%
ATTCCACCAACGCCTAATCC+AGG + chr3_4:76783047-76783066 Msa0523440:CDS 50.0%
!! ATGGGTGCCGGTTAATAGAG+GGG + chr3_4:76783160-76783179 Msa0523440:CDS 50.0%
! TCAGTTTTCTGCAGAGGTGG+AGG + chr3_4:76783277-76783296 Msa0523440:CDS 50.0%
TCTTGAGCATGGTCAACTCG+TGG - chr3_4:76783401-76783420 None:intergenic 50.0%
ACACGGAACATTAGCGGTTC+CGG + chr3_4:76783430-76783449 Msa0523440:CDS 50.0%
CGGTTCCGGTGTTTGAACAA+GGG + chr3_4:76783444-76783463 Msa0523440:CDS 50.0%
CTGCTCCCTTGTTCAAACAC+CGG - chr3_4:76783452-76783471 None:intergenic 50.0%
ACAAGGGAGCAGGACATGTT+TGG + chr3_4:76783460-76783479 Msa0523440:CDS 50.0%
CAAGGGAGCAGGACATGTTT+GGG + chr3_4:76783461-76783480 Msa0523440:CDS 50.0%
! GACTGTTTGCAAAGCGCTAG+AGG + chr3_4:76783538-76783557 Msa0523440:CDS 50.0%
GTTGTTGATCTCAGCAGCTC+TGG + chr3_4:76783914-76783933 Msa0523440:CDS 50.0%
CTCTTGAATCTCGGGTAGTG+CGG - chr3_4:76784071-76784090 None:intergenic 50.0%
TGGGTCTCTTGCATCCAACA+GGG + chr3_4:76784139-76784158 Msa0523440:CDS 50.0%
AACAGGGAAAAGATGGCTGC+CGG + chr3_4:76784155-76784174 Msa0523440:CDS 50.0%
CACACACTGTATATCTCCGG+TGG + chr3_4:76784195-76784214 Msa0523440:CDS 50.0%
!! AATAGGTCAAGGTGTTGCCG+GGG + chr3_4:76784288-76784307 Msa0523440:CDS 50.0%
ATCCACTGTCTCATCATGCC+AGG + chr3_4:76784374-76784393 Msa0523440:CDS 50.0%
AACCTGGCATGATGAGACAG+TGG - chr3_4:76784379-76784398 None:intergenic 50.0%
AGCTCGCAATCCAAACAACC+TGG - chr3_4:76784395-76784414 None:intergenic 50.0%
GTGATGGCCGTTGCTGATAT+TGG + chr3_4:76784616-76784635 Msa0523440:CDS 50.0%
AGTCGGAACTCCAACACAAG+AGG + chr3_4:76784659-76784678 Msa0523440:CDS 50.0%
GGAACTCCAACACAAGAGGA+TGG + chr3_4:76784663-76784682 Msa0523440:CDS 50.0%
AGACAGCCATCCTCTTGTGT+TGG - chr3_4:76784672-76784691 None:intergenic 50.0%
CAAGAGGATGGCTGTCTCAT+TGG + chr3_4:76784675-76784694 Msa0523440:CDS 50.0%
AGGATGGCTGTCTCATTGGA+TGG + chr3_4:76784679-76784698 Msa0523440:CDS 50.0%
! GAGGAGATGTTGACTGTGGT+AGG + chr3_4:76784776-76784795 Msa0523440:CDS 50.0%
GAGTGTTCTCCTTCCGTTGA+GGG + chr3_4:76784799-76784818 Msa0523440:CDS 50.0%
CTTAAAGGACCGTAGTCTGC+AGG + chr3_4:76785266-76785285 Msa0523440:intron 50.0%
AAGGGATACTCCAGACCATG+AGG - chr3_4:76785381-76785400 None:intergenic 50.0%
GGCAACACGGTATTAAGCGT+TGG + chr3_4:76785825-76785844 Msa0523440:CDS 50.0%
!! CTCGTCATTGACTCGGTTCA+AGG + chr3_4:76785896-76785915 Msa0523440:CDS 50.0%
ACCTTCAGGGCTCAACGAAT+CGG - chr3_4:76786059-76786078 None:intergenic 50.0%
GGTGATTTCGATGCACCTTC+AGG - chr3_4:76786073-76786092 None:intergenic 50.0%
! GTGTTGTTGCTCTGACAAGC+TGG - chr3_4:76786140-76786159 None:intergenic 50.0%
CATGCCAAGATCACAAAGCC+AGG + chr3_4:76786288-76786307 Msa0523440:CDS 50.0%
GGTGTTCACCAAGTGTTTCC+TGG - chr3_4:76786309-76786328 None:intergenic 50.0%
! CACTCGCAAAGCGTCTCAAA+AGG + chr3_4:76786363-76786382 Msa0523440:CDS 50.0%
! TCGCAAAGCGTCTCAAAAGG+AGG + chr3_4:76786366-76786385 Msa0523440:CDS 50.0%
GAGACGAGAAAACCCGGTTT+AGG + chr3_4:76786416-76786435 Msa0523440:CDS 50.0%
GCAGCACCATCTCCCATGAT+GGG - chr3_4:76782669-76782688 None:intergenic 55.0%
TGCAGCACCATCTCCCATGA+TGG - chr3_4:76782670-76782689 None:intergenic 55.0%
TGCTCGTTGTTCTCCAAGGC+AGG - chr3_4:76782879-76782898 None:intergenic 55.0%
GGGTTGCTCGTTGTTCTCCA+AGG - chr3_4:76782883-76782902 None:intergenic 55.0%
TCGTGCCGAACATCATTGCC+GGG - chr3_4:76782903-76782922 None:intergenic 55.0%
CTCGTGCCGAACATCATTGC+CGG - chr3_4:76782904-76782923 None:intergenic 55.0%
GATCCACCAGGTCCTGGATT+AGG - chr3_4:76783062-76783081 None:intergenic 55.0%
ATGGAAGATCCACCAGGTCC+TGG - chr3_4:76783068-76783087 None:intergenic 55.0%
AGCTGATAAGGGCCCTCAAG+TGG + chr3_4:76783096-76783115 Msa0523440:CDS 55.0%
TGCAGAGGTGGAGGACTCAA+AGG + chr3_4:76783286-76783305 Msa0523440:CDS 55.0%
GGTGGAGGACTCAAAGGAGT+TGG + chr3_4:76783292-76783311 Msa0523440:CDS 55.0%
GGAGGACTCAAAGGAGTTGG+TGG + chr3_4:76783295-76783314 Msa0523440:CDS 55.0%
!! GGACTCAAAGGAGTTGGTGG+CGG + chr3_4:76783298-76783317 Msa0523440:CDS 55.0%
!! GACTCAAAGGAGTTGGTGGC+GGG + chr3_4:76783299-76783318 Msa0523440:CDS 55.0%
CGAACATCAGGTGTCCACTC+AGG - chr3_4:76783356-76783375 None:intergenic 55.0%
GCGGTTCCGGTGTTTGAACA+AGG + chr3_4:76783443-76783462 Msa0523440:CDS 55.0%
CGGTGTTTGAACAAGGGAGC+AGG + chr3_4:76783450-76783469 Msa0523440:CDS 55.0%
CTCGGGTAGTGCGGTTTCAT+AGG - chr3_4:76784062-76784081 None:intergenic 55.0%
CGCACTACCCGAGATTCAAG+AGG + chr3_4:76784069-76784088 Msa0523440:CDS 55.0%
GAGACCCACGTCTGAGCTAA+AGG - chr3_4:76784127-76784146 None:intergenic 55.0%
GTGGGTCTCTTGCATCCAAC+AGG + chr3_4:76784138-76784157 Msa0523440:CDS 55.0%
! GGCAGCCATCTTTTCCCTGT+TGG - chr3_4:76784156-76784175 None:intergenic 55.0%
!! ATAGGTCAAGGTGTTGCCGG+GGG + chr3_4:76784289-76784308 Msa0523440:CDS 55.0%
! TGTCGGTTGAGAAGCACGGT+TGG - chr3_4:76784330-76784349 None:intergenic 55.0%
! GGAGTGTTCTCCTTCCGTTG+AGG + chr3_4:76784798-76784817 Msa0523440:CDS 55.0%
AGGAGAGAAAAGACGGGCCA+AGG + chr3_4:76784855-76784874 Msa0523440:CDS 55.0%
AAGGGACATGCCAGACCATG+AGG - chr3_4:76785319-76785338 None:intergenic 55.0%
! ACTCGGTTCAAGGTGCCTCT+GGG + chr3_4:76785906-76785925 Msa0523440:CDS 55.0%
CCTTCAGGGCTCAACGAATC+GGG - chr3_4:76786058-76786077 None:intergenic 55.0%
!! GGTCCTGGATTAGGCGTTGG+TGG - chr3_4:76783053-76783072 None:intergenic 60.0%
! CCAGGTCCTGGATTAGGCGT+TGG - chr3_4:76783056-76783075 None:intergenic 60.0%
CCAACGCCTAATCCAGGACC+TGG + chr3_4:76783053-76783072 Msa0523440:CDS 60.0%
ACGCCTAATCCAGGACCTGG+TGG + chr3_4:76783056-76783075 Msa0523440:CDS 60.0%
! GACTCGGTTCAAGGTGCCTC+TGG + chr3_4:76785905-76785924 Msa0523440:CDS 60.0%
GGGCTCAACGAATCGGGATC+TGG - chr3_4:76786052-76786071 None:intergenic 60.0%
! CCCGATTCGTTGAGCCCTGA+AGG + chr3_4:76786055-76786074 Msa0523440:CDS 60.0%
!! GAGTTGGTGGCGGGTTTGCC+TGG + chr3_4:76783308-76783327 Msa0523440:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76782029 76786874 76782029 ID=Msa0523440;Name=Msa0523440
chr3_4 mRNA 76782029 76786874 76782029 ID=Msa0523440-mRNA-1;Parent=Msa0523440;Name=Msa0523440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=337|1|1|1|0.75|0.6|5|196|909
chr3_4 exon 76782029 76782225 76782029 ID=Msa0523440-mRNA-1:exon:22323;Parent=Msa0523440-mRNA-1
chr3_4 exon 76782532 76783559 76782532 ID=Msa0523440-mRNA-1:exon:22324;Parent=Msa0523440-mRNA-1
chr3_4 exon 76783914 76783961 76783914 ID=Msa0523440-mRNA-1:exon:22325;Parent=Msa0523440-mRNA-1
chr3_4 exon 76784046 76784955 76784046 ID=Msa0523440-mRNA-1:exon:22326;Parent=Msa0523440-mRNA-1
chr3_4 exon 76785795 76786874 76785795 ID=Msa0523440-mRNA-1:exon:22327;Parent=Msa0523440-mRNA-1
chr3_4 five_prime_UTR 76782029 76782225 76782029 ID=Msa0523440-mRNA-1:five_prime_utr;Parent=Msa0523440-mRNA-1
chr3_4 five_prime_UTR 76782532 76782671 76782532 ID=Msa0523440-mRNA-1:five_prime_utr;Parent=Msa0523440-mRNA-1
chr3_4 CDS 76782672 76783559 76782672 ID=Msa0523440-mRNA-1:cds;Parent=Msa0523440-mRNA-1
chr3_4 CDS 76783914 76783961 76783914 ID=Msa0523440-mRNA-1:cds;Parent=Msa0523440-mRNA-1
chr3_4 CDS 76784046 76784955 76784046 ID=Msa0523440-mRNA-1:cds;Parent=Msa0523440-mRNA-1
chr3_4 CDS 76785795 76786678 76785795 ID=Msa0523440-mRNA-1:cds;Parent=Msa0523440-mRNA-1
chr3_4 three_prime_UTR 76786679 76786874 76786679 ID=Msa0523440-mRNA-1:three_prime_utr;Parent=Msa0523440-mRNA-1
Gene Sequence

>Msa0523440

ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCAATACCATGATGGAAGCTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTGCTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTGCCTTGGAGAACAACGAGCAACCCGGCAATGATGTTCGGCACGAGTCTCAAGATGCTCCTCCATGTACTGAACAGGAAAGCCGGATTATAGTTAATAATGCTGGTAGTAGCGACCTGCAGCAGTTTGAGTTTAAGACTCATTTGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCAACGCCTAATCCAGGACCTGGTGGATCTTCCATAACAGAGAAGCTGATAAGGGCCCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCAGAGGTGGAGGACTCAAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCACGAGTTGACCATGCTCAAGAGTGTGATGTACACGGAACATTAGCGGTTCCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGAGTTATTGAAGTGGTGATGACAACACAGCAGAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTAGAGGTTGTTGATCTCAGCAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGCTTGCGACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTCTGAGATCTGCATGTGAAATGCACAAATTGCCTTTAGCTCAGACGTGGGTCTCTTGCATCCAACAGGGAAAAGATGGCTGCCGGCACTCTGATGATAATTACACACACTGTATATCTCCGGTGGAGTATGCTTGCTATGTTGGTGATTCTTCGGTCAGGTTTTTTCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACAAACCAACCGTGCTTCTCAACCGACATTACTTCTTTAAGCAAGACAGACTATCCACTGTCTCATCATGCCAGGTTGTTTGGATTGCGAGCTGCAGTTGCCATTCGACTCCGAAGCATCTATAGTATCTCAGACGACTATGTTCTTGAGTTTTTCTTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTGTGCCGCAGCTTGCGAGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCATCTAATGAAGTGATGGCCGTTGCTGATATTGGATTTGCTGCAGATGTAATTCAGTCGGAACTCCAACACAAGAGGATGGCTGTCTCATTGGATGGCGAAGAAAAGTTTAATGAAACAATGTCTAGAAAGTTCTCGGAACAAAGGCGGCAACAAGAAAGTCTTACTTTAAGAGGAGATGTTGACTGTGGTAGGGAGTGTTCTCCTTCCGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGACAATATTTCGCTGGAAGTCTAAAAGATGCTGCAAAGAATATTGGCGTCTGTACTACAACTCTGAAAAGGATCTGCAGGCAACACGGTATTAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCCTTGCAGAAACTTCAACTCGTCATTGACTCGGTTCAAGGTGCCTCTGGGTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTAATCTCAACTCTGAATCAAGTTGATAATCCAGTCTCATTAAGCATACAGCCAGATCCCGATTCGTTGAGCCCTGAAGGTGCATCGAAATCACCTTCCTCTTCATGTAGTCAGACTTCCTATTCAAGCCATTCATGTTCCAGCTTGTCAGAGCAACAACACCACACAAACAATGTTGCGTCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTCGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAAATCAAAACTCATGCCAAGATCACAAAGCCAGGAAACACTTGGTGAACACCCGAAAACCGAGTATCGCAAGTCCTTATTAAAAAACACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGACGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGTGTTATGAAGATCTTGTGCAGGAAATTGCTAGGAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTCTCAATCTTCTGAGACTAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG
Protein sequence

>Msa0523440

MGDGAAVTSSATNTMMEAPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPALENNEQPGNDVRHESQDAPPCTEQESRIIVNNAGSSDLQQFEFKTHLGEGVSRLWIPPTPNPGPGGSSITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSAEVEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSDEYPRVDHAQECDVHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLSSSGHSSLQNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYTHCISPVEYACYVGDSSVRFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSISDDYVLEFFLPVDCNDSEEQKKMLTSLSMIIQRVCRSLRVITNKELEKNNLSSNEVMAVADIGFAADVIQSELQHKRMAVSLDGEEKFNETMSRKFSEQRRQQESLTLRGDVDCGRECSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSLSPEGASKSPSSSCSQTSYSSHSCSSLSEQQHHTNNVASGNKDSLVGEDSVDVVLKRIRSEAELKSLIQDNKSKLMPRSQSQETLGEHPKTEYRKSLLKNTRKASQKEDAHRVKVTFGDEKTRFRLPKNWCYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVSQSSETSTIKLCLQPSSNFIRSSLEFR*