AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0661750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661750 MtrunA17_Chr3g0143921 97.360 909 24 0 1 909 1 909 0.0 1829
Msa0661750 MtrunA17_Chr6g0472281 36.057 918 476 27 20 907 17 853 5.24e-149 461
Msa0661750 MtrunA17_Chr1g0203081 42.241 580 300 11 135 701 120 677 8.85e-136 430
Msa0661750 MtrunA17_Chr1g0203081 45.946 74 39 1 818 891 886 958 2.06e-13 74.7
Msa0661750 MtrunA17_Chr4g0033791 33.541 802 447 21 138 896 146 904 1.83e-125 401
Msa0661750 MtrunA17_Chr2g0329671 40.219 547 277 14 134 665 167 678 1.77e-118 384
Msa0661750 MtrunA17_Chr5g0448621 40.000 475 218 14 29 487 27 450 3.35e-85 293
Msa0661750 MtrunA17_Chr5g0448621 46.032 315 157 6 584 895 607 911 2.54e-68 245
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0661750 AT1G20640.1 48.256 889 385 17 21 900 7 829 0.0 728
Msa0661750 AT1G20640.3 48.256 889 385 17 21 900 7 829 0.0 728
Msa0661750 AT1G20640.2 48.256 889 385 17 21 900 7 829 0.0 728
Msa0661750 AT1G76350.2 46.189 879 360 18 25 892 11 787 0.0 709
Msa0661750 AT1G76350.1 46.189 879 360 18 25 892 11 787 0.0 709
Msa0661750 AT1G76350.4 46.189 879 360 18 25 892 11 787 0.0 709
Msa0661750 AT1G76350.3 46.189 879 360 18 25 892 11 787 0.0 709
Msa0661750 AT4G35270.2 42.251 942 461 20 23 899 23 946 0.0 665
Msa0661750 AT4G35270.1 42.251 942 461 20 23 899 23 946 0.0 665
Msa0661750 AT4G35270.3 42.251 942 461 20 23 899 23 946 0.0 665
Msa0661750 AT4G35270.4 42.251 942 461 20 23 899 23 946 0.0 665
Msa0661750 AT2G17150.1 41.466 914 453 18 23 899 27 895 0.0 637
Msa0661750 AT2G17150.6 41.466 914 453 18 23 899 27 895 0.0 637
Msa0661750 AT1G64530.1 36.803 807 391 19 126 893 92 818 6.37e-148 458
Msa0661750 AT2G17150.4 41.150 661 329 13 276 899 3 640 7.68e-144 442
Msa0661750 AT4G24020.1 35.689 849 425 24 139 907 147 954 8.71e-138 435
Msa0661750 AT1G64530.2 36.885 732 348 15 196 889 5 660 4.78e-136 422
Msa0661750 AT2G17150.2 39.394 627 320 12 23 615 27 627 5.87e-134 416
Msa0661750 AT2G17150.5 39.365 630 319 13 23 615 27 630 6.36e-133 413
Msa0661750 AT2G17150.3 39.365 630 319 13 23 615 27 630 6.36e-133 413
Msa0661750 AT2G43500.3 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.9 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.6 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.1 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.10 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.11 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.7 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.8 39.483 542 285 11 138 671 162 668 4.55e-121 390
Msa0661750 AT2G43500.5 38.739 555 284 12 138 671 162 681 5.42e-118 382
Msa0661750 AT2G43500.4 38.739 555 284 12 138 671 162 681 5.42e-118 382
Msa0661750 AT2G43500.2 38.378 555 286 12 138 671 162 681 1.02e-116 379
Msa0661750 AT3G59580.2 38.798 549 281 13 138 671 105 613 9.28e-116 375
Msa0661750 AT3G59580.3 38.798 549 281 13 138 671 105 613 9.28e-116 375
Msa0661750 AT3G59580.1 38.798 549 281 13 138 671 105 613 9.28e-116 375
Msa0661750 AT4G24020.2 34.318 711 350 21 277 907 1 674 2.20e-95 315
Msa0661750 AT4G38340.2 40.000 340 185 7 137 473 41 364 2.89e-70 247
Msa0661750 AT4G38340.2 77.381 84 19 0 585 668 419 502 4.96e-34 140
Msa0661750 AT4G38340.2 50.538 93 40 3 807 896 597 686 5.89e-17 86.3
Msa0661750 AT4G38340.1 40.000 340 185 7 137 473 112 435 1.41e-69 246
Msa0661750 AT4G38340.1 77.381 84 19 0 585 668 490 573 8.23e-34 140
Msa0661750 AT4G38340.1 50.538 93 40 3 807 896 668 757 6.59e-17 86.3

Find 233 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCGATATCAAATATT+TGG 0.153465 4_3:-73287972 Msa0661750:CDS
AAGATATGCTTATACAAATA+TGG 0.190554 4_3:-73291885 Msa0661750:CDS
TTCTCACATCTTATGATAAA+AGG 0.249810 4_3:-73292489 Msa0661750:five_prime_UTR
GTTTCCTGGCTTTGTGATCT+TGG 0.257901 4_3:+73288190 None:intergenic
GACCTTGATTCAAGTGAAAA+AGG 0.270581 4_3:+73291811 None:intergenic
GACTCGGTTCAAGGTGCCTC+TGG 0.272348 4_3:-73288577 Msa0661750:CDS
GTTTGCCTGGTCGAGTTTAT+AGG 0.274228 4_3:-73291705 Msa0661750:CDS
CTTGATTCAGAGTTGAGATT+AGG 0.293147 4_3:+73288485 None:intergenic
TCTTCATAACGCCAATTCTT+TGG 0.293995 4_3:+73288040 None:intergenic
TCTCATCATGCCAGGTTGTT+TGG 0.296000 4_3:-73290644 Msa0661750:CDS
GCAAGTGTGTGTGTATATTT+TGG 0.307264 4_3:-73292844 Msa0661750:five_prime_UTR
CTTGCGAGTTATAACAAATA+AGG 0.307272 4_3:-73290465 Msa0661750:CDS
TTGATTTATTATCTTGAATC+AGG 0.308616 4_3:+73288221 None:intergenic
GTAACAAGCTAGTTCTGTTT+TGG 0.310708 4_3:-73292417 Msa0661750:five_prime_UTR
CCTTATCAGCTTCTCTGTTA+TGG 0.316161 4_3:+73291942 None:intergenic
GGTGATTTCGATGCACCTTC+AGG 0.318756 4_3:+73288412 None:intergenic
GGGTAACTTCTTGTCAAGTT+TGG 0.320273 4_3:-73290207 Msa0661750:CDS
AACTTGTGATGCAGATTTAG+AGG 0.322889 4_3:-73287924 Msa0661750:CDS
AGAACTCCTGATAAAATTAC+TGG 0.324430 4_3:+73287841 None:intergenic
GTGATGGCCGTTGCTGATAT+TGG 0.327958 4_3:-73290410 Msa0661750:CDS
TTGATTCAGAGTTGAGATTA+GGG 0.328089 4_3:+73288486 None:intergenic
TTCATTCTCTTGGCCTGCCT+TGG 0.333817 4_3:-73292163 Msa0661750:CDS
GGTGTTCACCAAGTGTTTCC+TGG 0.335547 4_3:+73288176 None:intergenic
AATTCTTTGGCAACCTAAAC+CGG 0.340512 4_3:+73288053 None:intergenic
GTATTAAGCGTTGGCCTTCT+CGG 0.340723 4_3:-73288648 Msa0661750:CDS
CAAGAAAGTCTTACTTTAAG+AGG 0.342735 4_3:-73290269 Msa0661750:CDS
TCAAAGATTGGATTGGAAAA+AGG 0.346376 4_3:+73292189 None:intergenic
GTTTGAGTTTAAGACTCATT+TGG 0.347090 4_3:-73292025 Msa0661750:CDS
ACAAGGGAGCAGGACATGTT+TGG 0.349788 4_3:-73291566 Msa0661750:CDS
TTCCTTCTATTCAAAATTCT+CGG 0.352144 4_3:-73288539 Msa0661750:CDS
CTATCGTCTCCAAATTTATC+AGG 0.353197 4_3:-73288514 Msa0661750:CDS
ATGGAGCATCACTTGTTAAT+AGG 0.355386 4_3:-73290755 Msa0661750:CDS
GGTAACTTCTTGTCAAGTTT+GGG 0.360621 4_3:-73290206 Msa0661750:CDS
TTTGAGTTTAAGACTCATTT+GGG 0.363096 4_3:-73292024 Msa0661750:CDS
AAAGATGCTGCAAAGAATAT+TGG 0.364050 4_3:-73290095 Msa0661750:CDS
GAGTTGGTGGCGGGTTTGCC+TGG 0.366616 4_3:-73291718 Msa0661750:CDS
CACCTGATGTTCGATTCTTC+AGG 0.370588 4_3:-73291663 Msa0661750:CDS
AGGGTGGTTCCTGATAAATT+TGG 0.376289 4_3:+73288505 None:intergenic
GAGACGAGAAAACCCGGTTT+AGG 0.376446 4_3:-73288066 Msa0661750:CDS
TCTTTGACCCTTCATTCTCT+TGG 0.378297 4_3:-73292173 Msa0661750:CDS
GTGAAGGGGTTAGTAGGTTG+TGG 0.382908 4_3:-73292002 Msa0661750:CDS
TTTGCCTGGTCGAGTTTATA+GGG 0.385793 4_3:-73291704 Msa0661750:CDS
CAAGAGGATGGCTGTCTCAT+TGG 0.386966 4_3:-73290351 Msa0661750:CDS
GTGGGTCTCTTGCATCCAAC+AGG 0.388191 4_3:-73290888 Msa0661750:CDS
TTCCAGCGAAATATTGTCTA+AGG 0.388915 4_3:+73290123 None:intergenic
TTAATAGGTCAAGGTGTTGC+CGG 0.393576 4_3:-73290740 Msa0661750:CDS
CATAGAGTAAAAGTTACATT+TGG 0.399282 4_3:-73288088 Msa0661750:CDS
ACAACACAGCAGAGCAACTA+TGG 0.400513 4_3:-73291523 Msa0661750:CDS
GGTTTAGGTTGCCAAAGAAT+TGG 0.400528 4_3:-73288051 Msa0661750:CDS
GAGTGTTCTCCTTCCGTTGA+GGG 0.401877 4_3:-73290227 Msa0661750:CDS
CCATAACAGAGAAGCTGATA+AGG 0.402380 4_3:-73291942 Msa0661750:CDS
AGTGGATCAAAGATTTCAAT+AGG 0.403479 4_3:-73291912 Msa0661750:CDS
AGTTATAACAAATAAGGAAT+TGG 0.408257 4_3:-73290459 Msa0661750:CDS
CGGCTTTCCTGTTCAGTACA+TGG 0.410252 4_3:+73292087 None:intergenic
CTCGGGTAGTGCGGTTTCAT+AGG 0.417672 4_3:+73290967 None:intergenic
GAAATCTTTGATCCACTTGA+GGG 0.419150 4_3:+73291918 None:intergenic
GTCTGGTAACAAAGATTCAT+TGG 0.422317 4_3:-73288305 Msa0661750:CDS
TGCTCGTTGTTCTCCAAGGC+AGG 0.422575 4_3:+73292150 None:intergenic
GAGAATGAAGGGTCAAAGAT+TGG 0.423559 4_3:+73292177 None:intergenic
AGATCATTAGCTCTCAGAAT+TGG 0.423575 4_3:+73291835 None:intergenic
AACAATGTCTAGAAAGTTCT+CGG 0.424847 4_3:-73290306 Msa0661750:CDS
ATTTGGGTGAAGGGGTTAGT+AGG 0.424980 4_3:-73292008 Msa0661750:CDS
TGGAGCTTCCATCATGGTAT+TGG 0.425349 4_3:+73292320 None:intergenic
GATATCTCACAGAGATTTCT+CGG 0.426588 4_3:+73291770 None:intergenic
CAAGGGAGCAGGACATGTTT+GGG 0.427327 4_3:-73291565 Msa0661750:CDS
TGCTCCTCCATGTACTGAAC+AGG 0.433075 4_3:-73292094 Msa0661750:CDS
CTCGTCATTGACTCGGTTCA+AGG 0.434191 4_3:-73288586 Msa0661750:CDS
GGGCTCAACGAATCGGGATC+TGG 0.434923 4_3:+73288433 None:intergenic
TAATAGGTCAAGGTGTTGCC+GGG 0.435218 4_3:-73290739 Msa0661750:CDS
ACCTTCAGGGCTCAACGAAT+CGG 0.436452 4_3:+73288426 None:intergenic
TGGTTGGAAGCTTCTGCTGA+TGG 0.437275 4_3:-73292237 Msa0661750:CDS
ACACGGAACATTAGCGGTTC+CGG 0.438801 4_3:-73291596 Msa0661750:CDS
CTCGTGCCGAACATCATTGC+CGG 0.439855 4_3:+73292125 None:intergenic
GTTGTTGATCTCAGCAGCTC+TGG 0.440941 4_3:-73291112 Msa0661750:CDS
TTGCTATGTTGGTGATTCTT+CGG 0.441455 4_3:-73290801 Msa0661750:CDS
CTATCATCCCCTCTATTAAC+CGG 0.442227 4_3:+73291859 None:intergenic
TTGTAATTTACAATCACAAA+AGG 0.447067 4_3:+73287797 None:intergenic
ATTGTCCATGATTATTCAAA+GGG 0.447950 4_3:-73290498 Msa0661750:CDS
ATTTGGACGATGATTATGAA+TGG 0.449463 4_3:-73287955 Msa0661750:CDS
CTCAGAACCTCTTGAATCTC+GGG 0.451350 4_3:+73290950 None:intergenic
GGCTGTATGCTTAATGAGAC+TGG 0.451702 4_3:+73288454 None:intergenic
AGATATGCTTATACAAATAT+GGG 0.453741 4_3:-73291884 Msa0661750:CDS
CCTTCAGGGCTCAACGAATC+GGG 0.455000 4_3:+73288427 None:intergenic
GACTCAAAGGAGTTGGTGGC+GGG 0.455558 4_3:-73291727 Msa0661750:CDS
GGAACATGAATGGCTTGAAT+AGG 0.455976 4_3:+73288366 None:intergenic
TGCAAACAGTCTCAAGTTCA+CGG 0.457700 4_3:+73291500 None:intergenic
CAGCATTATTAACTATAATC+CGG 0.460364 4_3:+73292067 None:intergenic
CATTGTCCATGATTATTCAA+AGG 0.467851 4_3:-73290499 Msa0661750:CDS
GATCCACCAGGTCCTGGATT+AGG 0.474573 4_3:+73291967 None:intergenic
AGCAACCCGGCAATGATGTT+CGG 0.474729 4_3:-73292131 Msa0661750:CDS
TGCATCCAACAGGGAAAAGA+TGG 0.475400 4_3:-73290878 Msa0661750:CDS
TCACTGTCATTGCAATCTAC+AGG 0.475999 4_3:+73290545 None:intergenic
GAGGAGATGTTGACTGTGGT+AGG 0.478292 4_3:-73290250 Msa0661750:CDS
TAGAAGAAGCATACCCATCA+TGG 0.480856 4_3:-73292373 Msa0661750:exon
ACCACAAGATGAAAATTCAA+TGG 0.483142 4_3:-73292298 Msa0661750:CDS
TGCAGCACCATCTCCCATGA+TGG 0.484116 4_3:+73292359 None:intergenic
GAGACCCACGTCTGAGCTAA+AGG 0.485407 4_3:+73290902 None:intergenic
ATGTTGGTGATTCTTCGGTC+AGG 0.486077 4_3:-73290796 Msa0661750:CDS
GTGTTGTTGCTCTGACAAGC+TGG 0.486344 4_3:+73288345 None:intergenic
ATATGGGTGCCGGTTAATAG+AGG 0.486599 4_3:-73291868 Msa0661750:CDS
CGGTTAATAGAGGGGATGAT+AGG 0.488453 4_3:-73291858 Msa0661750:CDS
CATAACAGAGAAGCTGATAA+GGG 0.488496 4_3:-73291941 Msa0661750:CDS
CTCCTGAAGAATCGAACATC+AGG 0.489431 4_3:+73291661 None:intergenic
AGGAGAGAAAAGACGGGCCA+AGG 0.490415 4_3:-73290171 Msa0661750:CDS
GTCCTTAGACAATATTTCGC+TGG 0.494295 4_3:-73290125 Msa0661750:CDS
TCTTAAACTCAAACTGCTGC+AGG 0.496219 4_3:+73292034 None:intergenic
TTTGGACGATGATTATGAAT+GGG 0.496780 4_3:-73287954 Msa0661750:CDS
GTGATTTCGATGCACCTTCA+GGG 0.498166 4_3:+73288413 None:intergenic
GGTAACAAAGATTCATTGGT+TGG 0.498700 4_3:-73288301 Msa0661750:CDS
GCACACCCTTTGAATAATCA+TGG 0.498968 4_3:+73290493 None:intergenic
ATGGAAGATCCACCAGGTCC+TGG 0.499029 4_3:+73291961 None:intergenic
TGAAGGGTCAAAGATTGGAT+TGG 0.499145 4_3:+73292182 None:intergenic
CACACAAACAATGTTGCGTC+TGG 0.501686 4_3:-73288322 Msa0661750:CDS
TCTCAGAACCTCTTGAATCT+CGG 0.503095 4_3:+73290949 None:intergenic
GGACTCAAAGGAGTTGGTGG+CGG 0.508229 4_3:-73291728 Msa0661750:CDS
CAACTCTGAAAAGGATCTGC+AGG 0.508919 4_3:-73288678 Msa0661750:CDS
CCCGATTCGTTGAGCCCTGA+AGG 0.511003 4_3:-73288427 Msa0661750:CDS
AGGAGATGTTGACTGTGGTA+GGG 0.511843 4_3:-73290249 Msa0661750:CDS
AGTTTGGGAGTAAATAGAAC+AGG 0.512927 4_3:-73290191 Msa0661750:CDS
CTGACAAGCTGGAACATGAA+TGG 0.515320 4_3:+73288356 None:intergenic
TCTGTACTACAACTCTGAAA+AGG 0.515505 4_3:-73288687 Msa0661750:CDS
CACTCGCAAAGCGTCTCAAA+AGG 0.517406 4_3:-73288119 Msa0661750:CDS
GGGTTGCTCGTTGTTCTCCA+AGG 0.518849 4_3:+73292146 None:intergenic
GGGTTGCAGACAAAGTTTGA+TGG 0.518963 4_3:+73287865 None:intergenic
CGGATTATAGTTAATAATGC+TGG 0.519737 4_3:-73292066 Msa0661750:CDS
TTAAGACTCATTTGGGTGAA+GGG 0.525792 4_3:-73292017 Msa0661750:CDS
AGATTTCTCGGTACTTTGCA+AGG 0.526853 4_3:+73291782 None:intergenic
ATCCACTGTCTCATCATGCC+AGG 0.527462 4_3:-73290652 Msa0661750:CDS
TTTAAGACTCATTTGGGTGA+AGG 0.528588 4_3:-73292018 Msa0661750:CDS
CGGTGTTTGAACAAGGGAGC+AGG 0.529135 4_3:-73291576 Msa0661750:CDS
TGAAATCTTTGATCCACTTG+AGG 0.531373 4_3:+73291917 None:intergenic
GCGGTTCCGGTGTTTGAACA+AGG 0.534054 4_3:-73291583 Msa0661750:CDS
GTGGAGTATGCTTGCTATGT+TGG 0.534634 4_3:-73290812 Msa0661750:CDS
GGTCCTGGATTAGGCGTTGG+TGG 0.534809 4_3:+73291976 None:intergenic
AAGGCAGGCCAAGAGAATGA+AGG 0.539487 4_3:+73292165 None:intergenic
GCGTTATGAAGATCTTGTGC+AGG 0.540519 4_3:-73288029 Msa0661750:CDS
GCTTATACAAATATGGGTGC+CGG 0.542004 4_3:-73291878 Msa0661750:CDS
AACAGGGAAAAGATGGCTGC+CGG 0.543888 4_3:-73290871 Msa0661750:CDS
AGCTGATAAGGGCCCTCAAG+TGG 0.545368 4_3:-73291930 Msa0661750:CDS
ACTCGGTTCAAGGTGCCTCT+GGG 0.547073 4_3:-73288576 Msa0661750:CDS
TGTAATTATCATCAGAGTGC+CGG 0.547779 4_3:+73290852 None:intergenic
TAATAAGGACTTGCGATACT+CGG 0.548860 4_3:+73288147 None:intergenic
CATGCCAAGATCACAAAGCC+AGG 0.549068 4_3:-73288194 Msa0661750:CDS
TGCTGCAGATGTAATTCAGT+CGG 0.549867 4_3:-73290384 Msa0661750:CDS
CCAGGTCCTGGATTAGGCGT+TGG 0.550312 4_3:+73291973 None:intergenic
TAAAAGTTTCAGCTACCAAA+CGG 0.550315 4_3:+73292449 None:intergenic
GGAGGACTCAAAGGAGTTGG+TGG 0.551490 4_3:-73291731 Msa0661750:CDS
ATTCTTTGGCAACCTAAACC+GGG 0.553102 4_3:+73288054 None:intergenic
TTTGTTAGATGGTTGTTGGT+TGG 0.554167 4_3:-73292253 Msa0661750:CDS
CTGAGATACTATAGATACTT+CGG 0.554550 4_3:+73290594 None:intergenic
CTTATCATCTAATGAAGTGA+TGG 0.555317 4_3:-73290426 Msa0661750:CDS
CTCTTGAATCTCGGGTAGTG+CGG 0.556527 4_3:+73290958 None:intergenic
TGCAGAGGTGGAGGACTCAA+AGG 0.557266 4_3:-73291740 Msa0661750:CDS
ATTCCACCAACGCCTAATCC+AGG 0.557897 4_3:-73291979 Msa0661750:CDS
CATTTGGAGACGAGAAAACC+CGG 0.558546 4_3:-73288072 Msa0661750:CDS
TAAGACTCATTTGGGTGAAG+GGG 0.560800 4_3:-73292016 Msa0661750:CDS
GTTTGTCATAAAAGCACCCC+CGG 0.561641 4_3:+73290721 None:intergenic
GGTGGAGGACTCAAAGGAGT+TGG 0.562364 4_3:-73291734 Msa0661750:CDS
TTACACACACTGTATATCTC+CGG 0.564968 4_3:-73290834 Msa0661750:CDS
TCGTGCCGAACATCATTGCC+GGG 0.569558 4_3:+73292126 None:intergenic
CTTGCTTAAAGAAGTAATGT+CGG 0.569630 4_3:+73290682 None:intergenic
ATCTTGTGCAGGAAATTGCT+AGG 0.569881 4_3:-73288018 Msa0661750:CDS
GATGCTGCAAAGAATATTGG+CGG 0.571710 4_3:-73290092 Msa0661750:intron
GACTGTTTGCAAAGCGCTAG+AGG 0.574356 4_3:-73291488 Msa0661750:intron
TTGTGGTGGAGCTTCCATCA+TGG 0.576729 4_3:+73292314 None:intergenic
AGACAGCCATCCTCTTGTGT+TGG 0.577568 4_3:+73290357 None:intergenic
ATCTGCAACCAATACCATGA+TGG 0.578563 4_3:-73292328 Msa0661750:CDS
GGCAACACGGTATTAAGCGT+TGG 0.579088 4_3:-73288657 Msa0661750:CDS
AGCATACCCATCATGGGAGA+TGG 0.583903 4_3:-73292366 Msa0661750:exon
ATAGAACAGGAGAGAAAAGA+CGG 0.585692 4_3:-73290178 Msa0661750:CDS
CATGTACTGAACAGGAAAGC+CGG 0.586722 4_3:-73292086 Msa0661750:CDS
CATCACTTGTTAATAGGTCA+AGG 0.586973 4_3:-73290749 Msa0661750:CDS
TGTCGGTTGAGAAGCACGGT+TGG 0.589014 4_3:+73290699 None:intergenic
CGGTTCCGGTGTTTGAACAA+GGG 0.589544 4_3:-73291582 Msa0661750:CDS
CGAACATCAGGTGTCCACTC+AGG 0.589765 4_3:+73291673 None:intergenic
TATGGGTGCCGGTTAATAGA+GGG 0.590546 4_3:-73291867 Msa0661750:CDS
TCACAAAGCCAGGAAACACT+TGG 0.593082 4_3:-73288184 Msa0661750:CDS
AGGATGGCTGTCTCATTGGA+TGG 0.593239 4_3:-73290347 Msa0661750:CDS
ACTCCTGATAAAATTACTGG+AGG 0.593662 4_3:+73287844 None:intergenic
AGGCAGGCCAAGAGAATGAA+GGG 0.595697 4_3:+73292166 None:intergenic
TTGTTATAACTCGCAAGCTG+CGG 0.597685 4_3:+73290471 None:intergenic
AGCTCGCAATCCAAACAACC+TGG 0.599497 4_3:+73290634 None:intergenic
GGAAGTCTGACTACATGAAG+AGG 0.601423 4_3:+73288387 None:intergenic
ACTTCAACTCGTCATTGACT+CGG 0.601900 4_3:-73288593 Msa0661750:CDS
AATAGGTCAAGGTGTTGCCG+GGG 0.604344 4_3:-73290738 Msa0661750:CDS
AGAAGAAGCATACCCATCAT+GGG 0.605534 4_3:-73292372 Msa0661750:exon
CTCCTGATAAAATTACTGGA+GGG 0.605907 4_3:+73287845 None:intergenic
GCAGCACCATCTCCCATGAT+GGG 0.606072 4_3:+73292360 None:intergenic
CTAGAAAGTTCTCGGAACAA+AGG 0.606403 4_3:-73290298 Msa0661750:CDS
CAGACGCAACATTGTTTGTG+TGG 0.607061 4_3:+73288323 None:intergenic
TTATCCCTATAAACTCGACC+AGG 0.609566 4_3:+73291700 None:intergenic
AGCAAATCCAATATCAGCAA+CGG 0.611864 4_3:+73290403 None:intergenic
GGAGTGTTCTCCTTCCGTTG+AGG 0.611994 4_3:-73290228 Msa0661750:CDS
CCAACGCCTAATCCAGGACC+TGG 0.614235 4_3:-73291973 Msa0661750:CDS
CTGCTCCCTTGTTCAAACAC+CGG 0.615580 4_3:+73291577 None:intergenic
TGATGTACACGGAACATTAG+CGG 0.615722 4_3:-73291602 Msa0661750:CDS
TCTGTTATGGAAGATCCACC+AGG 0.616650 4_3:+73291955 None:intergenic
ATAGATACTTCGGAGTCGAA+TGG 0.619918 4_3:+73290604 None:intergenic
AATTGCCTTTAGCTCAGACG+TGG 0.620316 4_3:-73290907 Msa0661750:CDS
TGACAAGAAGTTACCCTCAA+CGG 0.620322 4_3:+73290214 None:intergenic
TCGCAAAGCGTCTCAAAAGG+AGG 0.621421 4_3:-73288116 Msa0661750:CDS
TTGGAGAACAACGAGCAACC+CGG 0.622537 4_3:-73292144 Msa0661750:CDS
ATGATTCACATGCATGACAA+AGG 0.628676 4_3:+73287771 None:intergenic
AGTCGGAACTCCAACACAAG+AGG 0.629939 4_3:-73290367 Msa0661750:CDS
GACGAGTTGAAGTTTCTGCA+AGG 0.629978 4_3:+73288603 None:intergenic
TTCTAGTATATAATAAGGAT+AGG 0.630264 4_3:+73287618 None:intergenic
ATTCAGAGTTGAGATTAGGG+TGG 0.634639 4_3:+73288489 None:intergenic
ACATAGCAAGCATACTCCAC+CGG 0.635320 4_3:+73290815 None:intergenic
GTACATCACACTCTTGAGCA+TGG 0.639396 4_3:+73291617 None:intergenic
GCTCAAGAGTGTGATGTACA+CGG 0.639508 4_3:-73291613 Msa0661750:CDS
CATCTTATGATAAAAGGACA+AGG 0.639708 4_3:-73292483 Msa0661750:five_prime_UTR
TCTTGAGCATGGTCAACTCG+TGG 0.640513 4_3:+73291628 None:intergenic
CGCACTACCCGAGATTCAAG+AGG 0.642440 4_3:-73290957 Msa0661750:CDS
GTCTGACTACATGAAGAGGA+AGG 0.643172 4_3:+73288391 None:intergenic
AAGAAGTTACCCTCAACGGA+AGG 0.646367 4_3:+73290218 None:intergenic
TAGAACAGGAGAGAAAAGAC+GGG 0.649215 4_3:-73290177 Msa0661750:CDS
GGAACTCCAACACAAGAGGA+TGG 0.651641 4_3:-73290363 Msa0661750:CDS
AAAAGGATCTGCAGGCAACA+CGG 0.653871 4_3:-73288670 Msa0661750:CDS
CTTTCCTGTTCAGTACATGG+AGG 0.656242 4_3:+73292090 None:intergenic
GAAAGTTCTCGGAACAAAGG+CGG 0.656927 4_3:-73290295 Msa0661750:CDS
CACACACTGTATATCTCCGG+TGG 0.659877 4_3:-73290831 Msa0661750:CDS
ATTGCCTTTAGCTCAGACGT+GGG 0.661550 4_3:-73290906 Msa0661750:CDS
ATAGGTCAAGGTGTTGCCGG+GGG 0.662191 4_3:-73290737 Msa0661750:CDS
TTCAAGTCTTCAGAATGTGA+AGG 0.663202 4_3:-73291086 Msa0661750:intron
ATGTTTGGGAGTTATTGAAG+TGG 0.676259 4_3:-73291551 Msa0661750:CDS
TTAAGAGGAGATGTTGACTG+TGG 0.679381 4_3:-73290254 Msa0661750:CDS
ATGGGTGCCGGTTAATAGAG+GGG 0.680121 4_3:-73291866 Msa0661750:CDS
TGGGTCTCTTGCATCCAACA+GGG 0.683646 4_3:-73290887 Msa0661750:CDS
ACGCCTAATCCAGGACCTGG+TGG 0.693296 4_3:-73291970 Msa0661750:CDS
GTAATGTCGGTTGAGAAGCA+CGG 0.695561 4_3:+73290695 None:intergenic
ATCAATTTGAAATGACCCAG+AGG 0.697023 4_3:+73288561 None:intergenic
AACCTGGCATGATGAGACAG+TGG 0.699432 4_3:+73290650 None:intergenic
ATAGGGATAAGATTCCTGAG+TGG 0.764696 4_3:-73291687 Msa0661750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAATTTGATTTCAT+TGG + chr4_3:73287647-73287666 None:intergenic 10.0%
!!! ATTTTATCATATATTTTTGT+AGG + chr4_3:73291326-73291345 None:intergenic 10.0%
!!! AAAAAAAAAAAATGGAATTT+TGG + chr4_3:73292928-73292947 None:intergenic 10.0%
!!! AATTCCATTTTTTTTTTTTT+TGG - chr4_3:73292929-73292948 Msa0661750:five_prime_UTR 10.0%
!! ATAAAAATAAAATACATGGT+TGG - chr4_3:73287661-73287680 Msa0661750:three_prime_UTR 15.0%
!! TAAAAATAAAATACATGGTT+GGG - chr4_3:73287662-73287681 Msa0661750:three_prime_UTR 15.0%
!! AAAGAGAATTTATTCAAAAA+AGG + chr4_3:73287897-73287916 None:intergenic 15.0%
!! AGTACAAAAAAATAATATAG+GGG + chr4_3:73290721-73290740 None:intergenic 15.0%
!! CAGTACAAAAAAATAATATA+GGG + chr4_3:73290722-73290741 None:intergenic 15.0%
!! TCAGTACAAAAAAATAATAT+AGG + chr4_3:73290723-73290742 None:intergenic 15.0%
!! ACATTATGTAAAACTTAATT+TGG + chr4_3:73290794-73290813 None:intergenic 15.0%
!!! TTTACATTTAATTCACTTTT+AGG - chr4_3:73291784-73291803 Msa0661750:CDS 15.0%
!! CAAACCAAAAAAAAAAAAAA+TGG + chr4_3:73292936-73292955 None:intergenic 15.0%
!! TAAATTCTCTTTACGTTTAA+AGG - chr4_3:73287905-73287924 Msa0661750:CDS 20.0%
!! ACAACGAATAATATGAAAAA+AGG + chr4_3:73288034-73288053 None:intergenic 20.0%
!! AAGATATGCTTATACAAATA+TGG - chr4_3:73288742-73288761 Msa0661750:intron 20.0%
!! AGATATGCTTATACAAATAT+GGG - chr4_3:73288743-73288762 Msa0661750:intron 20.0%
!!! TTTTAGAACAGTGAATTTAA+GGG - chr4_3:73289268-73289287 Msa0661750:intron 20.0%
!! TTATATTGAAATGTGTAACA+AGG + chr4_3:73289387-73289406 None:intergenic 20.0%
!! CATTTCAATATAAATGCTTA+TGG - chr4_3:73289394-73289413 Msa0661750:intron 20.0%
!! AGTTATAACAAATAAGGAAT+TGG - chr4_3:73290168-73290187 Msa0661750:CDS 20.0%
!!! TTTTTTTGTACTGAACATAT+AGG - chr4_3:73290729-73290748 Msa0661750:CDS 20.0%
!!! TTTTACATAATGTGACTTAA+AGG - chr4_3:73290801-73290820 Msa0661750:CDS 20.0%
!! TATGATAAAATTAAAGTGAC+CGG - chr4_3:73291335-73291354 Msa0661750:intron 20.0%
!!! GATTTTTCAATCAAAGATTT+GGG + chr4_3:73291395-73291414 None:intergenic 20.0%
!! TCTAACTTGAAATTAGAATT+TGG - chr4_3:73291718-73291737 Msa0661750:CDS 20.0%
!! TTGATTTATTATCTTGAATC+AGG + chr4_3:73292409-73292428 None:intergenic 20.0%
!! CAAATTCGATATCAAATATT+TGG - chr4_3:73292655-73292674 Msa0661750:intron 20.0%
!! TTGTAATTTACAATCACAAA+AGG + chr4_3:73292833-73292852 None:intergenic 20.0%
!!! TATTTTGTTACAACATTGTA+AGG - chr4_3:73292968-73292987 Msa0661750:five_prime_UTR 20.0%
! CCAGTAAATGAAAAAATGAA+AGG + chr4_3:73287745-73287764 None:intergenic 25.0%
!!! CCTTTCATTTTTTCATTTAC+TGG - chr4_3:73287742-73287761 Msa0661750:three_prime_UTR 25.0%
!! AGAGAATCTTTTTATGAGTA+TGG - chr4_3:73287810-73287829 Msa0661750:exon 25.0%
! TCATTCTATATAGTCAAAAG+AGG + chr4_3:73287975-73287994 None:intergenic 25.0%
! TTCTCACATCTTATGATAAA+AGG - chr4_3:73288138-73288157 Msa0661750:CDS 25.0%
! CAGCATTATTAACTATAATC+CGG + chr4_3:73288563-73288582 None:intergenic 25.0%
!! TTTGAGTTTAAGACTCATTT+GGG - chr4_3:73288603-73288622 Msa0661750:CDS 25.0%
!!! TCTTTGTTTCAAGTTCTTTT+GGG + chr4_3:73289240-73289259 None:intergenic 25.0%
!!! TTCTTTGTTTCAAGTTCTTT+TGG + chr4_3:73289241-73289260 None:intergenic 25.0%
! AACTTGAAACAAAGAACTTA+TGG - chr4_3:73289245-73289264 Msa0661750:intron 25.0%
!!! GTTTTAGAACAGTGAATTTA+AGG - chr4_3:73289267-73289286 Msa0661750:intron 25.0%
!! ACTTTTACATATTGAATTGC+TGG - chr4_3:73289334-73289353 Msa0661750:intron 25.0%
! TTTGATGAGCTTTACATATA+TGG + chr4_3:73289439-73289458 None:intergenic 25.0%
!! TCAATACTAGTTTAATGATC+TGG - chr4_3:73289472-73289491 Msa0661750:intron 25.0%
!! CAATACTAGTTTAATGATCT+GGG - chr4_3:73289473-73289492 Msa0661750:intron 25.0%
!! AATACTAGTTTAATGATCTG+GGG - chr4_3:73289474-73289493 Msa0661750:intron 25.0%
!!! AAAATATAACCAGTTTGTTG+AGG + chr4_3:73289622-73289641 None:intergenic 25.0%
!! TCAACAAACTGGTTATATTT+TGG - chr4_3:73289621-73289640 Msa0661750:intron 25.0%
! ATTGTCCATGATTATTCAAA+GGG - chr4_3:73290129-73290148 Msa0661750:CDS 25.0%
!! TTTTCTATTGACATGCTAAA+TGG + chr4_3:73290616-73290635 None:intergenic 25.0%
! AAAATTGATGAGTAGAACAT+AGG + chr4_3:73290667-73290686 None:intergenic 25.0%
! AACAAAATCTTAAAGGACTA+CGG - chr4_3:73290838-73290857 Msa0661750:CDS 25.0%
!!! TAAATTAGCTCTAACGTTTA+AGG - chr4_3:73291054-73291073 Msa0661750:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr4_3:73291137-73291156 Msa0661750:intron 25.0%
!! TTATATGCTATTAACTTGGA+TGG + chr4_3:73291293-73291312 None:intergenic 25.0%
! TCCAAGTTAATAGCATATAA+CGG - chr4_3:73291293-73291312 Msa0661750:intron 25.0%
!!! CGATTTTTCAATCAAAGATT+TGG + chr4_3:73291396-73291415 None:intergenic 25.0%
! AATGTAAAACAATAAACCCA+TGG + chr4_3:73291772-73291791 None:intergenic 25.0%
! GAAAAATTCAATTCAACAGA+TGG + chr4_3:73291918-73291937 None:intergenic 25.0%
! TTCCTTCTATTCAAAATTCT+CGG - chr4_3:73292088-73292107 Msa0661750:CDS 25.0%
!!! TTTGCGAGTGTTTTTTAATA+AGG + chr4_3:73292498-73292517 None:intergenic 25.0%
! CATAGAGTAAAAGTTACATT+TGG - chr4_3:73292539-73292558 Msa0661750:intron 25.0%
GCAACGAATAAAAAGATTCT+CGG + chr4_3:73287693-73287712 None:intergenic 30.0%
!!! TATGGCTATTACACTTTTTC+TGG - chr4_3:73287828-73287847 Msa0661750:CDS 30.0%
TCTAAATTCACTGAAGCAAA+AGG + chr4_3:73287870-73287889 None:intergenic 30.0%
ACTGACATCATTAACAACTT+TGG - chr4_3:73288106-73288125 Msa0661750:CDS 30.0%
CATCTTATGATAAAAGGACA+AGG - chr4_3:73288144-73288163 Msa0661750:CDS 30.0%
TAAAAGTTTCAGCTACCAAA+CGG + chr4_3:73288181-73288200 None:intergenic 30.0%
! ATTGAATTTTCATCTTGTGG+TGG + chr4_3:73288330-73288349 None:intergenic 30.0%
ACCACAAGATGAAAATTCAA+TGG - chr4_3:73288329-73288348 Msa0661750:CDS 30.0%
! TCCATTGAATTTTCATCTTG+TGG + chr4_3:73288333-73288352 None:intergenic 30.0%
! ATGAGTGAACTTTTGTTAGA+TGG - chr4_3:73288363-73288382 Msa0661750:CDS 30.0%
! AACTTTTGTTAGATGGTTGT+TGG - chr4_3:73288370-73288389 Msa0661750:CDS 30.0%
! TCAAAGATTGGATTGGAAAA+AGG + chr4_3:73288441-73288460 None:intergenic 30.0%
CGGATTATAGTTAATAATGC+TGG - chr4_3:73288561-73288580 Msa0661750:CDS 30.0%
! GTTTGAGTTTAAGACTCATT+TGG - chr4_3:73288602-73288621 Msa0661750:CDS 30.0%
AGTGGATCAAAGATTTCAAT+AGG - chr4_3:73288715-73288734 Msa0661750:intron 30.0%
!! TTCCTTTTTCACTTGAATCA+AGG - chr4_3:73288814-73288833 Msa0661750:intron 30.0%
!! GCATAGAGTTTTTGTTTGTT+TGG - chr4_3:73289181-73289200 Msa0661750:intron 30.0%
!!! GTCATTTTTTACAACACACA+AGG - chr4_3:73289205-73289224 Msa0661750:intron 30.0%
GGAGCAATTTAATCATAAGA+GGG + chr4_3:73289366-73289385 None:intergenic 30.0%
AGGAGCAATTTAATCATAAG+AGG + chr4_3:73289367-73289386 None:intergenic 30.0%
ATGTAAAGCTCATCAAAAGT+CGG - chr4_3:73289442-73289461 Msa0661750:intron 30.0%
TACATAGAAAATCATCTCTG+TGG - chr4_3:73289564-73289583 Msa0661750:intron 30.0%
CTTGCTTAAAGAAGTAATGT+CGG + chr4_3:73289948-73289967 None:intergenic 30.0%
CTGAGATACTATAGATACTT+CGG + chr4_3:73290036-73290055 None:intergenic 30.0%
CATTGTCCATGATTATTCAA+AGG - chr4_3:73290128-73290147 Msa0661750:CDS 30.0%
CTTGCGAGTTATAACAAATA+AGG - chr4_3:73290162-73290181 Msa0661750:CDS 30.0%
CTTATCATCTAATGAAGTGA+TGG - chr4_3:73290201-73290220 Msa0661750:CDS 30.0%
AACAATGTCTAGAAAGTTCT+CGG - chr4_3:73290321-73290340 Msa0661750:CDS 30.0%
CAAGAAAGTCTTACTTTAAG+AGG - chr4_3:73290358-73290377 Msa0661750:CDS 30.0%
AAAGATGCTGCAAAGAATAT+TGG - chr4_3:73290532-73290551 Msa0661750:CDS 30.0%
!! ATTTTTGTTTGCAAACACCA+AGG - chr4_3:73290588-73290607 Msa0661750:CDS 30.0%
GAGACAGAACAAAATCTTAA+AGG - chr4_3:73290831-73290850 Msa0661750:CDS 30.0%
!! ATGAGGTTTTGCTATATGTT+TGG + chr4_3:73290909-73290928 None:intergenic 30.0%
AAACATATAGCAAAACCTCA+TGG - chr4_3:73290908-73290927 Msa0661750:CDS 30.0%
ATGAGCATATTTGCCTATTT+GGG + chr4_3:73290956-73290975 None:intergenic 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG + chr4_3:73291258-73291277 None:intergenic 30.0%
! AGTGATTTTCACATAGATCT+AGG + chr4_3:73291533-73291552 None:intergenic 30.0%
AGAAACTCGAAGTAAAAACT+AGG - chr4_3:73291634-73291653 Msa0661750:CDS 30.0%
!!! TACAGTTGATTTTTAGCCAT+GGG - chr4_3:73291753-73291772 Msa0661750:CDS 30.0%
! ATCCGAGAATTTTGAATAGA+AGG + chr4_3:73292093-73292112 None:intergenic 30.0%
TTGATTCAGAGTTGAGATTA+GGG + chr4_3:73292144-73292163 None:intergenic 30.0%
ATTTGGACGATGATTATGAA+TGG - chr4_3:73292672-73292691 Msa0661750:intron 30.0%
TTTGGACGATGATTATGAAT+GGG - chr4_3:73292673-73292692 Msa0661750:intron 30.0%
AGAACTCCTGATAAAATTAC+TGG + chr4_3:73292789-73292808 None:intergenic 30.0%
! GCAAGTGTGTGTGTATATTT+TGG - chr4_3:73287783-73287802 Msa0661750:three_prime_UTR 35.0%
!! AGTGTGTGTGTATATTTTGG+TGG - chr4_3:73287786-73287805 Msa0661750:three_prime_UTR 35.0%
!! AAGGATTTTTCAGATCCGTT+TGG - chr4_3:73288163-73288182 Msa0661750:CDS 35.0%
!!! GTAACAAGCTAGTTCTGTTT+TGG - chr4_3:73288210-73288229 Msa0661750:CDS 35.0%
!!! AAGCTAGTTCTGTTTTGGTT+TGG - chr4_3:73288215-73288234 Msa0661750:CDS 35.0%
TTTGTTAGATGGTTGTTGGT+TGG - chr4_3:73288374-73288393 Msa0661750:CDS 35.0%
! TTTAAGACTCATTTGGGTGA+AGG - chr4_3:73288609-73288628 Msa0661750:CDS 35.0%
TTAAGACTCATTTGGGTGAA+GGG - chr4_3:73288610-73288629 Msa0661750:CDS 35.0%
CATAACAGAGAAGCTGATAA+GGG - chr4_3:73288686-73288705 Msa0661750:CDS 35.0%
GAAATCTTTGATCCACTTGA+GGG + chr4_3:73288712-73288731 None:intergenic 35.0%
TGAAATCTTTGATCCACTTG+AGG + chr4_3:73288713-73288732 None:intergenic 35.0%
! AGATCATTAGCTCTCAGAAT+TGG + chr4_3:73288795-73288814 None:intergenic 35.0%
GACCTTGATTCAAGTGAAAA+AGG + chr4_3:73288819-73288838 None:intergenic 35.0%
GATATCTCACAGAGATTTCT+CGG + chr4_3:73288860-73288879 None:intergenic 35.0%
ATGTTTGGGAGTTATTGAAG+TGG - chr4_3:73289076-73289095 Msa0661750:intron 35.0%
AAACTCTATGCAAACAAGCA+AGG + chr4_3:73289172-73289191 None:intergenic 35.0%
TTCAAGTCTTCAGAATGTGA+AGG - chr4_3:73289541-73289560 Msa0661750:intron 35.0%
TCTCAATTTCCTCAACAAAC+TGG - chr4_3:73289610-73289629 Msa0661750:intron 35.0%
!!! CAAACTGGTTATATTTTGGC+AGG - chr4_3:73289625-73289644 Msa0661750:intron 35.0%
TGTAATTATCATCAGAGTGC+CGG + chr4_3:73289778-73289797 None:intergenic 35.0%
TTACACACACTGTATATCTC+CGG - chr4_3:73289793-73289812 Msa0661750:intron 35.0%
!! TTGCTATGTTGGTGATTCTT+CGG - chr4_3:73289826-73289845 Msa0661750:intron 35.0%
! ATGGAGCATCACTTGTTAAT+AGG - chr4_3:73289872-73289891 Msa0661750:intron 35.0%
! CATCACTTGTTAATAGGTCA+AGG - chr4_3:73289878-73289897 Msa0661750:intron 35.0%
AGCAAATCCAATATCAGCAA+CGG + chr4_3:73290227-73290246 None:intergenic 35.0%
GGTAACTTCTTGTCAAGTTT+GGG - chr4_3:73290421-73290440 Msa0661750:CDS 35.0%
AGTTTGGGAGTAAATAGAAC+AGG - chr4_3:73290436-73290455 Msa0661750:CDS 35.0%
ATAGAACAGGAGAGAAAAGA+CGG - chr4_3:73290449-73290468 Msa0661750:CDS 35.0%
TTCCAGCGAAATATTGTCTA+AGG + chr4_3:73290507-73290526 None:intergenic 35.0%
AGATAGAATGCTTGTGTGTA+AGG + chr4_3:73290565-73290584 None:intergenic 35.0%
TATAGGGGAACGAAACATTA+AGG + chr4_3:73290706-73290725 None:intergenic 35.0%
AAAATACATCCTGCAGACTA+CGG + chr4_3:73290885-73290904 None:intergenic 35.0%
CATGAGCATATTTGCCTATT+TGG + chr4_3:73290957-73290976 None:intergenic 35.0%
GCTCATGTAATAAAACCTCA+TGG - chr4_3:73290970-73290989 Msa0661750:CDS 35.0%
TGTAATAAAACCTCATGGTC+TGG - chr4_3:73290975-73290994 Msa0661750:CDS 35.0%
AGAGAACAGAACTACATGAA+GGG + chr4_3:73291006-73291025 None:intergenic 35.0%
GCCGTTATATGCTATTAACT+TGG + chr4_3:73291297-73291316 None:intergenic 35.0%
ATTTCATCATCTAAGTGTGG+TGG + chr4_3:73291497-73291516 None:intergenic 35.0%
GTGATTTCATCATCTAAGTG+TGG + chr4_3:73291500-73291519 None:intergenic 35.0%
TGGCTAAAAATCAACTGTAG+AGG + chr4_3:73291752-73291771 None:intergenic 35.0%
!!! CTACAGTTGATTTTTAGCCA+TGG - chr4_3:73291752-73291771 Msa0661750:CDS 35.0%
ATGAGACACTTGCATTTGTT+TGG + chr4_3:73291851-73291870 None:intergenic 35.0%
! TCTGTACTACAACTCTGAAA+AGG - chr4_3:73291940-73291959 Msa0661750:CDS 35.0%
!!! ACCTTTTTTATCTTCCGAGA+AGG + chr4_3:73291996-73292015 None:intergenic 35.0%
TCTCGGAAGATAAAAAAGGT+TGG - chr4_3:73291996-73292015 Msa0661750:CDS 35.0%
! ATCAATTTGAAATGACCCAG+AGG + chr4_3:73292069-73292088 None:intergenic 35.0%
CTATCGTCTCCAAATTTATC+AGG - chr4_3:73292113-73292132 Msa0661750:CDS 35.0%
CTTGATTCAGAGTTGAGATT+AGG + chr4_3:73292145-73292164 None:intergenic 35.0%
GTCTGGTAACAAAGATTCAT+TGG - chr4_3:73292322-73292341 Msa0661750:CDS 35.0%
GGTAACAAAGATTCATTGGT+TGG - chr4_3:73292326-73292345 Msa0661750:CDS 35.0%
TAATAAGGACTTGCGATACT+CGG + chr4_3:73292483-73292502 None:intergenic 35.0%
AATTCTTTGGCAACCTAAAC+CGG + chr4_3:73292577-73292596 None:intergenic 35.0%
TCTTCATAACGCCAATTCTT+TGG + chr4_3:73292590-73292609 None:intergenic 35.0%
AACTTGTGATGCAGATTTAG+AGG - chr4_3:73292703-73292722 Msa0661750:intron 35.0%
! AACCCTCCAGTAATTTTATC+AGG - chr4_3:73292780-73292799 Msa0661750:intron 35.0%
CTCCTGATAAAATTACTGGA+GGG + chr4_3:73292785-73292804 None:intergenic 35.0%
ACTCCTGATAAAATTACTGG+AGG + chr4_3:73292786-73292805 None:intergenic 35.0%
ATGATTCACATGCATGACAA+AGG + chr4_3:73292859-73292878 None:intergenic 35.0%
!!! TTCTGTTTTGGTTTGGCTTG+TGG - chr4_3:73288222-73288241 Msa0661750:CDS 40.0%
! TAGAAGAAGCATACCCATCA+TGG - chr4_3:73288254-73288273 Msa0661750:CDS 40.0%
! AGAAGAAGCATACCCATCAT+GGG - chr4_3:73288255-73288274 Msa0661750:CDS 40.0%
ATCTGCAACCAATACCATGA+TGG - chr4_3:73288299-73288318 Msa0661750:CDS 40.0%
TGAAGGGTCAAAGATTGGAT+TGG + chr4_3:73288448-73288467 None:intergenic 40.0%
GAGAATGAAGGGTCAAAGAT+TGG + chr4_3:73288453-73288472 None:intergenic 40.0%
TCTTTGACCCTTCATTCTCT+TGG - chr4_3:73288454-73288473 Msa0661750:CDS 40.0%
TCTTAAACTCAAACTGCTGC+AGG + chr4_3:73288596-73288615 None:intergenic 40.0%
TAAGACTCATTTGGGTGAAG+GGG - chr4_3:73288611-73288630 Msa0661750:CDS 40.0%
CCTTATCAGCTTCTCTGTTA+TGG + chr4_3:73288688-73288707 None:intergenic 40.0%
CCATAACAGAGAAGCTGATA+AGG - chr4_3:73288685-73288704 Msa0661750:CDS 40.0%
GCTTATACAAATATGGGTGC+CGG - chr4_3:73288749-73288768 Msa0661750:intron 40.0%
CTATCATCCCCTCTATTAAC+CGG + chr4_3:73288771-73288790 None:intergenic 40.0%
AGATTTCTCGGTACTTTGCA+AGG + chr4_3:73288848-73288867 None:intergenic 40.0%
! GAGATATCAGTTTTCTGCAG+AGG - chr4_3:73288872-73288891 Msa0661750:intron 40.0%
! ATATCAGTTTTCTGCAGAGG+TGG - chr4_3:73288875-73288894 Msa0661750:intron 40.0%
TTTGCCTGGTCGAGTTTATA+GGG - chr4_3:73288923-73288942 Msa0661750:intron 40.0%
TTATCCCTATAAACTCGACC+AGG + chr4_3:73288930-73288949 None:intergenic 40.0%
ATAGGGATAAGATTCCTGAG+TGG - chr4_3:73288940-73288959 Msa0661750:intron 40.0%
TGATGTACACGGAACATTAG+CGG - chr4_3:73289025-73289044 Msa0661750:intron 40.0%
TGCAAACAGTCTCAAGTTCA+CGG + chr4_3:73289130-73289149 None:intergenic 40.0%
TCTCAGAACCTCTTGAATCT+CGG + chr4_3:73289681-73289700 None:intergenic 40.0%
!!! TTCGGTCAGGTTTTTTCATG+AGG - chr4_3:73289844-73289863 Msa0661750:intron 40.0%
!!! GTTTTTTCATGAGGCTTGCA+TGG - chr4_3:73289853-73289872 Msa0661750:intron 40.0%
!! TTAATAGGTCAAGGTGTTGC+CGG - chr4_3:73289887-73289906 Msa0661750:intron 40.0%
ATAGATACTTCGGAGTCGAA+TGG + chr4_3:73290026-73290045 None:intergenic 40.0%
TCACTGTCATTGCAATCTAC+AGG + chr4_3:73290085-73290104 None:intergenic 40.0%
GCACACCCTTTGAATAATCA+TGG + chr4_3:73290137-73290156 None:intergenic 40.0%
TTGTTATAACTCGCAAGCTG+CGG + chr4_3:73290159-73290178 None:intergenic 40.0%
TGCTGCAGATGTAATTCAGT+CGG - chr4_3:73290243-73290262 Msa0661750:CDS 40.0%
CTAGAAAGTTCTCGGAACAA+AGG - chr4_3:73290329-73290348 Msa0661750:CDS 40.0%
! TTAAGAGGAGATGTTGACTG+TGG - chr4_3:73290373-73290392 Msa0661750:CDS 40.0%
TGACAAGAAGTTACCCTCAA+CGG + chr4_3:73290416-73290435 None:intergenic 40.0%
GGGTAACTTCTTGTCAAGTT+TGG - chr4_3:73290420-73290439 Msa0661750:CDS 40.0%
TAGAACAGGAGAGAAAAGAC+GGG - chr4_3:73290450-73290469 Msa0661750:CDS 40.0%
! AGTGATAGTTTTCTCTGCCT+TGG + chr4_3:73290476-73290495 None:intergenic 40.0%
GTCCTTAGACAATATTTCGC+TGG - chr4_3:73290502-73290521 Msa0661750:CDS 40.0%
GATGCTGCAAAGAATATTGG+CGG - chr4_3:73290535-73290554 Msa0661750:CDS 40.0%
TGACATGCTAAATGGTACCT+TGG + chr4_3:73290608-73290627 None:intergenic 40.0%
CGGACAGTTAAGCAACTTAA+AGG - chr4_3:73290858-73290877 Msa0661750:CDS 40.0%
TATAGCAAAACCTCATGGTC+TGG - chr4_3:73290913-73290932 Msa0661750:CDS 40.0%
TCCCTTCATGTTTCCCAAAT+AGG - chr4_3:73290940-73290959 Msa0661750:CDS 40.0%
GCCTATTTGGGAAACATGAA+GGG + chr4_3:73290944-73290963 None:intergenic 40.0%
TGCCTATTTGGGAAACATGA+AGG + chr4_3:73290945-73290964 None:intergenic 40.0%
CAGAGAACAGAACTACATGA+AGG + chr4_3:73291007-73291026 None:intergenic 40.0%
CAACACCGCTAAAAACGTAA+AGG - chr4_3:73291250-73291269 Msa0661750:intron 40.0%
TAAAGTGACCGGAATATCCA+TGG - chr4_3:73291346-73291365 Msa0661750:intron 40.0%
AAATGAACACCGCAAGAAGA+CGG - chr4_3:73291433-73291452 Msa0661750:intron 40.0%
! TTTGATTTCCCGTCTTCTTG+CGG + chr4_3:73291445-73291464 None:intergenic 40.0%
ACAGAGAGAAAAAGATGACG+AGG - chr4_3:73291566-73291585 Msa0661750:CDS 40.0%
CAGAGAGAAAAAGATGACGA+GGG - chr4_3:73291567-73291586 Msa0661750:CDS 40.0%
AGAGAGAAAAAGATGACGAG+GGG - chr4_3:73291568-73291587 Msa0661750:CDS 40.0%
AAAAACTAGGACCAGCTTGT+TGG - chr4_3:73291647-73291666 Msa0661750:CDS 40.0%
! TGGTTCTGCAGTGACAAAAA+TGG + chr4_3:73291831-73291850 None:intergenic 40.0%
GCCTTCTCGGAAGATAAAAA+AGG - chr4_3:73291992-73292011 Msa0661750:CDS 40.0%
! ACTTCAACTCGTCATTGACT+CGG - chr4_3:73292034-73292053 Msa0661750:CDS 40.0%
AGGGTGGTTCCTGATAAATT+TGG + chr4_3:73292125-73292144 None:intergenic 40.0%
ATTCAGAGTTGAGATTAGGG+TGG + chr4_3:73292141-73292160 None:intergenic 40.0%
GGAACATGAATGGCTTGAAT+AGG + chr4_3:73292264-73292283 None:intergenic 40.0%
ATTCTTTGGCAACCTAAACC+GGG + chr4_3:73292576-73292595 None:intergenic 40.0%
!! GGTTTAGGTTGCCAAAGAAT+TGG - chr4_3:73292576-73292595 Msa0661750:intron 40.0%
ATCTTGTGCAGGAAATTGCT+AGG - chr4_3:73292609-73292628 Msa0661750:intron 40.0%
TGGAGCTTCCATCATGGTAT+TGG + chr4_3:73288310-73288329 None:intergenic 45.0%
CTTTCCTGTTCAGTACATGG+AGG + chr4_3:73288540-73288559 None:intergenic 45.0%
CATGTACTGAACAGGAAAGC+CGG - chr4_3:73288541-73288560 Msa0661750:CDS 45.0%
! ATTTGGGTGAAGGGGTTAGT+AGG - chr4_3:73288619-73288638 Msa0661750:CDS 45.0%
TCTGTTATGGAAGATCCACC+AGG + chr4_3:73288675-73288694 None:intergenic 45.0%
!! ATATGGGTGCCGGTTAATAG+AGG - chr4_3:73288759-73288778 Msa0661750:intron 45.0%
!! TATGGGTGCCGGTTAATAGA+GGG - chr4_3:73288760-73288779 Msa0661750:intron 45.0%
CGGTTAATAGAGGGGATGAT+AGG - chr4_3:73288769-73288788 Msa0661750:intron 45.0%
GTTTGCCTGGTCGAGTTTAT+AGG - chr4_3:73288922-73288941 Msa0661750:intron 45.0%
CACCTGATGTTCGATTCTTC+AGG - chr4_3:73288964-73288983 Msa0661750:intron 45.0%
CTCCTGAAGAATCGAACATC+AGG + chr4_3:73288969-73288988 None:intergenic 45.0%
GTACATCACACTCTTGAGCA+TGG + chr4_3:73289013-73289032 None:intergenic 45.0%
! GCTCAAGAGTGTGATGTACA+CGG - chr4_3:73289014-73289033 Msa0661750:intron 45.0%
ACAACACAGCAGAGCAACTA+TGG - chr4_3:73289104-73289123 Msa0661750:intron 45.0%
!! GGGGAAAGTTGTTAACTTGC+AGG - chr4_3:73289493-73289512 Msa0661750:intron 45.0%
CTCAGAACCTCTTGAATCTC+GGG + chr4_3:73289680-73289699 None:intergenic 45.0%
! AATTGCCTTTAGCTCAGACG+TGG - chr4_3:73289720-73289739 Msa0661750:intron 45.0%
! ATTGCCTTTAGCTCAGACGT+GGG - chr4_3:73289721-73289740 Msa0661750:intron 45.0%
TGCATCCAACAGGGAAAAGA+TGG - chr4_3:73289749-73289768 Msa0661750:intron 45.0%
ACATAGCAAGCATACTCCAC+CGG + chr4_3:73289815-73289834 None:intergenic 45.0%
!! GTGGAGTATGCTTGCTATGT+TGG - chr4_3:73289815-73289834 Msa0661750:intron 45.0%
!! ATGTTGGTGATTCTTCGGTC+AGG - chr4_3:73289831-73289850 Msa0661750:intron 45.0%
!! TAATAGGTCAAGGTGTTGCC+GGG - chr4_3:73289888-73289907 Msa0661750:intron 45.0%
!! GTTTGTCATAAAAGCACCCC+CGG + chr4_3:73289909-73289928 None:intergenic 45.0%
! GTAATGTCGGTTGAGAAGCA+CGG + chr4_3:73289935-73289954 None:intergenic 45.0%
TCTCATCATGCCAGGTTGTT+TGG - chr4_3:73289983-73290002 Msa0661750:intron 45.0%
GAAAGTTCTCGGAACAAAGG+CGG - chr4_3:73290332-73290351 Msa0661750:CDS 45.0%
! AGGAGATGTTGACTGTGGTA+GGG - chr4_3:73290378-73290397 Msa0661750:CDS 45.0%
AAGAAGTTACCCTCAACGGA+AGG + chr4_3:73290412-73290431 None:intergenic 45.0%
AATGAACACCGCAAGAAGAC+GGG - chr4_3:73291434-73291453 Msa0661750:intron 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG + chr4_3:73291473-73291492 None:intergenic 45.0%
GAGAGAAAAAGATGACGAGG+GGG - chr4_3:73291569-73291588 Msa0661750:CDS 45.0%
! CAACTCTGAAAAGGATCTGC+AGG - chr4_3:73291949-73291968 Msa0661750:CDS 45.0%
AAAAGGATCTGCAGGCAACA+CGG - chr4_3:73291957-73291976 Msa0661750:CDS 45.0%
!! GTATTAAGCGTTGGCCTTCT+CGG - chr4_3:73291979-73291998 Msa0661750:CDS 45.0%
! GACGAGTTGAAGTTTCTGCA+AGG + chr4_3:73292027-73292046 None:intergenic 45.0%
GGCTGTATGCTTAATGAGAC+TGG + chr4_3:73292176-73292195 None:intergenic 45.0%
GTGATTTCGATGCACCTTCA+GGG + chr4_3:73292217-73292236 None:intergenic 45.0%
GTCTGACTACATGAAGAGGA+AGG + chr4_3:73292239-73292258 None:intergenic 45.0%
GGAAGTCTGACTACATGAAG+AGG + chr4_3:73292243-73292262 None:intergenic 45.0%
CTGACAAGCTGGAACATGAA+TGG + chr4_3:73292274-73292293 None:intergenic 45.0%
CAGACGCAACATTGTTTGTG+TGG + chr4_3:73292307-73292326 None:intergenic 45.0%
CACACAAACAATGTTGCGTC+TGG - chr4_3:73292305-73292324 Msa0661750:CDS 45.0%
!! GTTTCCTGGCTTTGTGATCT+TGG + chr4_3:73292440-73292459 None:intergenic 45.0%
TCACAAAGCCAGGAAACACT+TGG - chr4_3:73292443-73292462 Msa0661750:five_prime_UTR 45.0%
! ACTTGCGATACTCGGTTTTC+GGG + chr4_3:73292475-73292494 None:intergenic 45.0%
! GACTTGCGATACTCGGTTTT+CGG + chr4_3:73292476-73292495 None:intergenic 45.0%
CATTTGGAGACGAGAAAACC+CGG - chr4_3:73292555-73292574 Msa0661750:intron 45.0%
GCGTTATGAAGATCTTGTGC+AGG - chr4_3:73292598-73292617 Msa0661750:intron 45.0%
GGGTTGCAGACAAAGTTTGA+TGG + chr4_3:73292765-73292784 None:intergenic 45.0%
!! ATTAATAAAAATAAAATACA+TGG - chr4_3:73287657-73287676 Msa0661750:three_prime_UTR 5.0%
!!! ATAATCAATTTTTTTTTTTT+TGG + chr4_3:73291080-73291099 None:intergenic 5.0%
AGCATACCCATCATGGGAGA+TGG - chr4_3:73288261-73288280 Msa0661750:CDS 50.0%
! TTGTGGTGGAGCTTCCATCA+TGG + chr4_3:73288316-73288335 None:intergenic 50.0%
TGGTTGGAAGCTTCTGCTGA+TGG - chr4_3:73288390-73288409 Msa0661750:CDS 50.0%
AGGCAGGCCAAGAGAATGAA+GGG + chr4_3:73288464-73288483 None:intergenic 50.0%
AAGGCAGGCCAAGAGAATGA+AGG + chr4_3:73288465-73288484 None:intergenic 50.0%
TTCATTCTCTTGGCCTGCCT+TGG - chr4_3:73288464-73288483 Msa0661750:CDS 50.0%
TTGGAGAACAACGAGCAACC+CGG - chr4_3:73288483-73288502 Msa0661750:CDS 50.0%
AGCAACCCGGCAATGATGTT+CGG - chr4_3:73288496-73288515 Msa0661750:CDS 50.0%
TGCTCCTCCATGTACTGAAC+AGG - chr4_3:73288533-73288552 Msa0661750:CDS 50.0%
CGGCTTTCCTGTTCAGTACA+TGG + chr4_3:73288543-73288562 None:intergenic 50.0%
! GTGAAGGGGTTAGTAGGTTG+TGG - chr4_3:73288625-73288644 Msa0661750:CDS 50.0%
ATTCCACCAACGCCTAATCC+AGG - chr4_3:73288648-73288667 Msa0661750:CDS 50.0%
!! ATGGGTGCCGGTTAATAGAG+GGG - chr4_3:73288761-73288780 Msa0661750:intron 50.0%
! TCAGTTTTCTGCAGAGGTGG+AGG - chr4_3:73288878-73288897 Msa0661750:intron 50.0%
TCTTGAGCATGGTCAACTCG+TGG + chr4_3:73289002-73289021 None:intergenic 50.0%
ACACGGAACATTAGCGGTTC+CGG - chr4_3:73289031-73289050 Msa0661750:intron 50.0%
CGGTTCCGGTGTTTGAACAA+GGG - chr4_3:73289045-73289064 Msa0661750:intron 50.0%
CTGCTCCCTTGTTCAAACAC+CGG + chr4_3:73289053-73289072 None:intergenic 50.0%
ACAAGGGAGCAGGACATGTT+TGG - chr4_3:73289061-73289080 Msa0661750:intron 50.0%
CAAGGGAGCAGGACATGTTT+GGG - chr4_3:73289062-73289081 Msa0661750:intron 50.0%
! GACTGTTTGCAAAGCGCTAG+AGG - chr4_3:73289139-73289158 Msa0661750:intron 50.0%
GTTGTTGATCTCAGCAGCTC+TGG - chr4_3:73289515-73289534 Msa0661750:intron 50.0%
CTCTTGAATCTCGGGTAGTG+CGG + chr4_3:73289672-73289691 None:intergenic 50.0%
TGGGTCTCTTGCATCCAACA+GGG - chr4_3:73289740-73289759 Msa0661750:intron 50.0%
AACAGGGAAAAGATGGCTGC+CGG - chr4_3:73289756-73289775 Msa0661750:intron 50.0%
CACACACTGTATATCTCCGG+TGG - chr4_3:73289796-73289815 Msa0661750:intron 50.0%
!! AATAGGTCAAGGTGTTGCCG+GGG - chr4_3:73289889-73289908 Msa0661750:intron 50.0%
ATCCACTGTCTCATCATGCC+AGG - chr4_3:73289975-73289994 Msa0661750:intron 50.0%
AACCTGGCATGATGAGACAG+TGG + chr4_3:73289980-73289999 None:intergenic 50.0%
AGCTCGCAATCCAAACAACC+TGG + chr4_3:73289996-73290015 None:intergenic 50.0%
GTGATGGCCGTTGCTGATAT+TGG - chr4_3:73290217-73290236 Msa0661750:CDS 50.0%
AGTCGGAACTCCAACACAAG+AGG - chr4_3:73290260-73290279 Msa0661750:CDS 50.0%
GGAACTCCAACACAAGAGGA+TGG - chr4_3:73290264-73290283 Msa0661750:CDS 50.0%
AGACAGCCATCCTCTTGTGT+TGG + chr4_3:73290273-73290292 None:intergenic 50.0%
CAAGAGGATGGCTGTCTCAT+TGG - chr4_3:73290276-73290295 Msa0661750:CDS 50.0%
AGGATGGCTGTCTCATTGGA+TGG - chr4_3:73290280-73290299 Msa0661750:CDS 50.0%
! GAGGAGATGTTGACTGTGGT+AGG - chr4_3:73290377-73290396 Msa0661750:CDS 50.0%
GAGTGTTCTCCTTCCGTTGA+GGG - chr4_3:73290400-73290419 Msa0661750:CDS 50.0%
CTTAAAGGACCGTAGTCTGC+AGG - chr4_3:73290873-73290892 Msa0661750:CDS 50.0%
AAGGGATACTCCAGACCATG+AGG + chr4_3:73290988-73291007 None:intergenic 50.0%
ACCGGAATATCCATGGTCTC+CGG - chr4_3:73291353-73291372 Msa0661750:intron 50.0%
TCCGGAGACCATGGATATTC+CGG + chr4_3:73291357-73291376 None:intergenic 50.0%
!! TAGGACCAGCTTGTTGGAGA+GGG - chr4_3:73291653-73291672 Msa0661750:CDS 50.0%
GGCAACACGGTATTAAGCGT+TGG - chr4_3:73291970-73291989 Msa0661750:CDS 50.0%
!! CTCGTCATTGACTCGGTTCA+AGG - chr4_3:73292041-73292060 Msa0661750:CDS 50.0%
ACCTTCAGGGCTCAACGAAT+CGG + chr4_3:73292204-73292223 None:intergenic 50.0%
GGTGATTTCGATGCACCTTC+AGG + chr4_3:73292218-73292237 None:intergenic 50.0%
! GTGTTGTTGCTCTGACAAGC+TGG + chr4_3:73292285-73292304 None:intergenic 50.0%
CATGCCAAGATCACAAAGCC+AGG - chr4_3:73292433-73292452 Msa0661750:five_prime_UTR 50.0%
GGTGTTCACCAAGTGTTTCC+TGG + chr4_3:73292454-73292473 None:intergenic 50.0%
! CACTCGCAAAGCGTCTCAAA+AGG - chr4_3:73292508-73292527 Msa0661750:intron 50.0%
! TCGCAAAGCGTCTCAAAAGG+AGG - chr4_3:73292511-73292530 Msa0661750:intron 50.0%
GAGACGAGAAAACCCGGTTT+AGG - chr4_3:73292561-73292580 Msa0661750:intron 50.0%
GCAGCACCATCTCCCATGAT+GGG + chr4_3:73288270-73288289 None:intergenic 55.0%
TGCAGCACCATCTCCCATGA+TGG + chr4_3:73288271-73288290 None:intergenic 55.0%
TGCTCGTTGTTCTCCAAGGC+AGG + chr4_3:73288480-73288499 None:intergenic 55.0%
GGGTTGCTCGTTGTTCTCCA+AGG + chr4_3:73288484-73288503 None:intergenic 55.0%
TCGTGCCGAACATCATTGCC+GGG + chr4_3:73288504-73288523 None:intergenic 55.0%
CTCGTGCCGAACATCATTGC+CGG + chr4_3:73288505-73288524 None:intergenic 55.0%
GATCCACCAGGTCCTGGATT+AGG + chr4_3:73288663-73288682 None:intergenic 55.0%
ATGGAAGATCCACCAGGTCC+TGG + chr4_3:73288669-73288688 None:intergenic 55.0%
AGCTGATAAGGGCCCTCAAG+TGG - chr4_3:73288697-73288716 Msa0661750:intron 55.0%
TGCAGAGGTGGAGGACTCAA+AGG - chr4_3:73288887-73288906 Msa0661750:intron 55.0%
GGTGGAGGACTCAAAGGAGT+TGG - chr4_3:73288893-73288912 Msa0661750:intron 55.0%
GGAGGACTCAAAGGAGTTGG+TGG - chr4_3:73288896-73288915 Msa0661750:intron 55.0%
!! GGACTCAAAGGAGTTGGTGG+CGG - chr4_3:73288899-73288918 Msa0661750:intron 55.0%
!! GACTCAAAGGAGTTGGTGGC+GGG - chr4_3:73288900-73288919 Msa0661750:intron 55.0%
CGAACATCAGGTGTCCACTC+AGG + chr4_3:73288957-73288976 None:intergenic 55.0%
GCGGTTCCGGTGTTTGAACA+AGG - chr4_3:73289044-73289063 Msa0661750:intron 55.0%
CGGTGTTTGAACAAGGGAGC+AGG - chr4_3:73289051-73289070 Msa0661750:intron 55.0%
CTCGGGTAGTGCGGTTTCAT+AGG + chr4_3:73289663-73289682 None:intergenic 55.0%
CGCACTACCCGAGATTCAAG+AGG - chr4_3:73289670-73289689 Msa0661750:intron 55.0%
GAGACCCACGTCTGAGCTAA+AGG + chr4_3:73289728-73289747 None:intergenic 55.0%
GTGGGTCTCTTGCATCCAAC+AGG - chr4_3:73289739-73289758 Msa0661750:intron 55.0%
! GGCAGCCATCTTTTCCCTGT+TGG + chr4_3:73289757-73289776 None:intergenic 55.0%
!! ATAGGTCAAGGTGTTGCCGG+GGG - chr4_3:73289890-73289909 Msa0661750:intron 55.0%
! TGTCGGTTGAGAAGCACGGT+TGG + chr4_3:73289931-73289950 None:intergenic 55.0%
! GGAGTGTTCTCCTTCCGTTG+AGG - chr4_3:73290399-73290418 Msa0661750:CDS 55.0%
AGGAGAGAAAAGACGGGCCA+AGG - chr4_3:73290456-73290475 Msa0661750:CDS 55.0%
AAGGGACATGCCAGACCATG+AGG + chr4_3:73290926-73290945 None:intergenic 55.0%
GATGACGAGGGGGTGATTTC+AGG - chr4_3:73291579-73291598 Msa0661750:CDS 55.0%
!! CTAGGACCAGCTTGTTGGAG+AGG - chr4_3:73291652-73291671 Msa0661750:CDS 55.0%
!! ACCAGCTTGTTGGAGAGGGA+GGG - chr4_3:73291657-73291676 Msa0661750:CDS 55.0%
! ACTCGGTTCAAGGTGCCTCT+GGG - chr4_3:73292051-73292070 Msa0661750:CDS 55.0%
CCTTCAGGGCTCAACGAATC+GGG + chr4_3:73292203-73292222 None:intergenic 55.0%
!! GGTCCTGGATTAGGCGTTGG+TGG + chr4_3:73288654-73288673 None:intergenic 60.0%
! CCAGGTCCTGGATTAGGCGT+TGG + chr4_3:73288657-73288676 None:intergenic 60.0%
CCAACGCCTAATCCAGGACC+TGG - chr4_3:73288654-73288673 Msa0661750:CDS 60.0%
ACGCCTAATCCAGGACCTGG+TGG - chr4_3:73288657-73288676 Msa0661750:CDS 60.0%
CGTTGCAGATCCGGAGACCA+TGG + chr4_3:73291366-73291385 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG + chr4_3:73291375-73291394 None:intergenic 60.0%
!! GACCAGCTTGTTGGAGAGGG+AGG - chr4_3:73291656-73291675 Msa0661750:CDS 60.0%
!! CCAGCTTGTTGGAGAGGGAG+GGG - chr4_3:73291658-73291677 Msa0661750:CDS 60.0%
! GACTCGGTTCAAGGTGCCTC+TGG - chr4_3:73292050-73292069 Msa0661750:CDS 60.0%
GGGCTCAACGAATCGGGATC+TGG + chr4_3:73292197-73292216 None:intergenic 60.0%
! CCCGATTCGTTGAGCCCTGA+AGG - chr4_3:73292200-73292219 Msa0661750:CDS 60.0%
!! GAGTTGGTGGCGGGTTTGCC+TGG - chr4_3:73288909-73288928 Msa0661750:intron 65.0%
CCCCTCCCTCTCCAACAAGC+TGG + chr4_3:73291661-73291680 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 73287630 73293019 73287630 ID=Msa0661750;Name=Msa0661750
chr4_3 mRNA 73287630 73293019 73287630 ID=Msa0661750-mRNA-1;Parent=Msa0661750;Name=Msa0661750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=337|1|1|1|0.75|0.6|5|196|909
chr4_3 exon 73287630 73288709 73287630 ID=Msa0661750-mRNA-1:exon:22161;Parent=Msa0661750-mRNA-1
chr4_3 exon 73290093 73291002 73290093 ID=Msa0661750-mRNA-1:exon:22160;Parent=Msa0661750-mRNA-1
chr4_3 exon 73291087 73291134 73291087 ID=Msa0661750-mRNA-1:exon:22159;Parent=Msa0661750-mRNA-1
chr4_3 exon 73291489 73292516 73291489 ID=Msa0661750-mRNA-1:exon:22158;Parent=Msa0661750-mRNA-1
chr4_3 exon 73292823 73293019 73292823 ID=Msa0661750-mRNA-1:exon:22157;Parent=Msa0661750-mRNA-1
chr4_3 five_prime_UTR 73292823 73293019 73292823 ID=Msa0661750-mRNA-1:five_prime_utr;Parent=Msa0661750-mRNA-1
chr4_3 five_prime_UTR 73292377 73292516 73292377 ID=Msa0661750-mRNA-1:five_prime_utr;Parent=Msa0661750-mRNA-1
chr4_3 CDS 73291489 73292376 73291489 ID=Msa0661750-mRNA-1:cds;Parent=Msa0661750-mRNA-1
chr4_3 CDS 73291087 73291134 73291087 ID=Msa0661750-mRNA-1:cds;Parent=Msa0661750-mRNA-1
chr4_3 CDS 73290093 73291002 73290093 ID=Msa0661750-mRNA-1:cds;Parent=Msa0661750-mRNA-1
chr4_3 CDS 73287826 73288709 73287826 ID=Msa0661750-mRNA-1:cds;Parent=Msa0661750-mRNA-1
chr4_3 three_prime_UTR 73287630 73287825 73287630 ID=Msa0661750-mRNA-1:three_prime_utr;Parent=Msa0661750-mRNA-1
Gene Sequence

>Msa0661750

ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCAATACCATGATGGAAGCTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTGCTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTGCCTTGGAGAACAACGAGCAACCCGGCAATGATGTTCGGCACGAGTCTCAAGATGCTCCTCCATGTACTGAACAGGAAAGCCGGATTATAGTTAATAATGCTGGTAGTAGCGACCTGCAGCAGTTTGAGTTTAAGACTCATTTGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCAACGCCTAATCCAGGACCTGGTGGATCTTCCATAACAGAGAAGCTGATAAGGGCCCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCAGAGGTGGAGGACTCAAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCACGAGTTGACCATGCTCAAGAGTGTGATGTACACGGAACATTAGCGGTTCCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGAGTTATTGAAGTGGTGATGACAACACAGCAGAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTAGAGGTTGTTGATCTCAGCAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGCTTGCGACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTCTGAGATCTGCATGTGAAATGCACAAATTGCCTTTAGCTCAGACGTGGGTCTCTTGCATCCAACAGGGAAAAGATGGCTGCCGGCACTCTGATGATAATTACACACACTGTATATCTCCGGTGGAGTATGCTTGCTATGTTGGTGATTCTTCGGTCAGGTTTTTTCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACAAACCAACCGTGCTTCTCAACCGACATTACTTCTTTAAGCAAGACAGACTATCCACTGTCTCATCATGCCAGGTTGTTTGGATTGCGAGCTGCAGTTGCCATTCGACTCCGAAGTATCTATAGTATCTCAGACGACTATGTTCTTGAGTTTTTCTTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTGTGCCGCAGCTTGCGAGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCATCTAATGAAGTGATGGCCGTTGCTGATATTGGATTTGCTGCAGATGTAATTCAGTCGGAACTCCAACACAAGAGGATGGCTGTCTCATTGGATGGCGAAGAAAAGTTTAATGAAACAATGTCTAGAAAGTTCTCGGAACAAAGGCGGCAACAAGAAAGTCTTACTTTAAGAGGAGATGTTGACTGTGGTAGGGAGTGTTCTCCTTCCGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGACAATATTTCGCTGGAAGTCTAAAAGATGCTGCAAAGAATATTGGCGTCTGTACTACAACTCTGAAAAGGATCTGCAGGCAACACGGTATTAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCCTTGCAGAAACTTCAACTCGTCATTGACTCGGTTCAAGGTGCCTCTGGGTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTAATCTCAACTCTGAATCAAGTTGATAATCCAGTCTCATTAAGCATACAGCCAGATCCCGATTCGTTGAGCCCTGAAGGTGCATCGAAATCACCTTCCTCTTCATGTAGTCAGACTTCCTATTCAAGCCATTCATGTTCCAGCTTGTCAGAGCAACAACACCACACAAACAATGTTGCGTCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTCGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAAATCAAAACTCATGCCAAGATCACAAAGCCAGGAAACACTTGGTGAACACCCGAAAACCGAGTATCGCAAGTCCTTATTAAAAAACACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGACGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGCGTTATGAAGATCTTGTGCAGGAAATTGCTAGGAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTCTCAATCTTCTGAGAATAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG
Protein sequence

>Msa0661750

MGDGAAVTSSATNTMMEAPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPALENNEQPGNDVRHESQDAPPCTEQESRIIVNNAGSSDLQQFEFKTHLGEGVSRLWIPPTPNPGPGGSSITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSAEVEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSDEYPRVDHAQECDVHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLSSSGHSSLQNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYTHCISPVEYACYVGDSSVRFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSISDDYVLEFFLPVDCNDSEEQKKMLTSLSMIIQRVCRSLRVITNKELEKNNLSSNEVMAVADIGFAADVIQSELQHKRMAVSLDGEEKFNETMSRKFSEQRRQQESLTLRGDVDCGRECSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSLSPEGASKSPSSSCSQTSYSSHSCSSLSEQQHHTNNVASGNKDSLVGEDSVDVVLKRIRSEAELKSLIQDNKSKLMPRSQSQETLGEHPKTEYRKSLLKNTRKASQKEDAHRVKVTFGDEKTRFRLPKNWRYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVSQSSENSTIKLCLQPSSNFIRSSLEFR*