AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523480 MtrunA17_Chr3g0143921 92.417 633 16 3 1 601 277 909 0.0 1181
Msa0523480 MtrunA17_Chr6g0472281 35.791 651 323 20 1 599 246 853 5.57e-92 301
Msa0523480 MtrunA17_Chr1g0203081 40.138 436 202 12 1 393 258 677 1.71e-77 265
Msa0523480 MtrunA17_Chr1g0203081 45.946 74 39 1 510 583 886 958 1.78e-13 73.9
Msa0523480 MtrunA17_Chr2g0329671 40.351 399 182 10 2 363 305 684 5.45e-74 254
Msa0523480 MtrunA17_Chr5g0448621 45.652 322 148 6 276 587 607 911 4.66e-72 249
Msa0523480 MtrunA17_Chr5g0448621 43.925 214 86 4 7 186 237 450 1.28e-42 164
Msa0523480 MtrunA17_Chr4g0033791 38.596 399 189 11 2 363 281 660 1.88e-66 233
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523480 AT1G76350.2 43.089 615 246 10 1 584 246 787 3.50e-150 453
Msa0523480 AT1G76350.1 43.089 615 246 10 1 584 246 787 3.50e-150 453
Msa0523480 AT1G76350.4 43.089 615 246 10 1 584 246 787 3.50e-150 453
Msa0523480 AT1G76350.3 43.089 615 246 10 1 584 246 787 3.50e-150 453
Msa0523480 AT4G35270.2 42.537 670 293 14 2 591 289 946 1.28e-147 451
Msa0523480 AT4G35270.1 42.537 670 293 14 2 591 289 946 1.28e-147 451
Msa0523480 AT4G35270.3 42.537 670 293 14 2 591 289 946 1.28e-147 451
Msa0523480 AT4G35270.4 42.537 670 293 14 2 591 289 946 1.28e-147 451
Msa0523480 AT2G17150.1 41.641 658 294 15 2 591 260 895 8.54e-142 434
Msa0523480 AT2G17150.6 41.641 658 294 15 2 591 260 895 8.54e-142 434
Msa0523480 AT2G17150.4 40.874 641 289 15 19 591 22 640 6.54e-136 411
Msa0523480 AT1G20640.1 50.739 406 157 5 1 368 241 641 5.85e-117 368
Msa0523480 AT1G20640.3 50.739 406 157 5 1 368 241 641 5.85e-117 368
Msa0523480 AT1G20640.2 50.739 406 157 5 1 368 241 641 5.85e-117 368
Msa0523480 AT1G64530.2 33.798 645 302 17 1 585 84 663 1.55e-91 296
Msa0523480 AT1G64530.1 33.798 645 302 17 1 585 239 818 3.56e-90 297
Msa0523480 AT4G24020.2 32.528 704 340 21 1 599 1 674 1.78e-83 275
Msa0523480 AT2G43500.3 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.9 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.6 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.1 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.10 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.11 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.7 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.8 38.619 391 188 9 4 363 299 668 6.91e-72 249
Msa0523480 AT2G43500.5 37.624 404 187 10 4 363 299 681 5.83e-69 241
Msa0523480 AT2G43500.4 37.624 404 187 10 4 363 299 681 5.83e-69 241
Msa0523480 AT2G43500.2 37.129 404 189 10 4 363 299 681 8.40e-68 238
Msa0523480 AT4G24020.1 37.416 449 221 10 1 401 281 717 1.63e-66 234
Msa0523480 AT4G24020.1 41.111 90 52 1 510 599 866 954 6.52e-15 79.0
Msa0523480 AT4G38340.2 39.024 369 172 10 1 360 178 502 1.36e-61 217
Msa0523480 AT4G38340.2 53.659 82 33 2 499 578 597 675 3.44e-16 82.8
Msa0523480 AT4G38340.1 39.024 369 172 10 1 360 249 573 3.73e-61 217
Msa0523480 AT4G38340.1 48.837 86 42 1 495 578 661 746 3.92e-16 82.8
Msa0523480 AT2G17150.2 37.736 371 163 9 2 307 260 627 7.27e-60 211
Msa0523480 AT2G17150.5 37.701 374 162 10 2 307 260 630 6.51e-59 209
Msa0523480 AT2G17150.3 37.701 374 162 10 2 307 260 630 6.51e-59 209

Find 229 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTCGATATCAAATATT+TGG 0.153465 3_4:-76818171 Msa0523480:CDS
AAGATATGCTTATACAAATA+TGG 0.190554 3_4:-76821547 Msa0523480:five_prime_UTR
TTCTCACATCTTATGATAAA+AGG 0.249810 3_4:-76822151 Msa0523480:five_prime_UTR
GTTTCCTGGCTTTGTGATCT+TGG 0.257901 3_4:+76818389 None:intergenic
GACCTTGATTCAAGTGAAAA+AGG 0.270581 3_4:+76821473 None:intergenic
GACTCGGTTCAAGGTGCCTC+TGG 0.272348 3_4:-76818776 Msa0523480:CDS
TCTTCATAACACCAATTCTT+TGG 0.279461 3_4:+76818239 None:intergenic
CTTGATTCAGAGTTGAGATT+AGG 0.293147 3_4:+76818684 None:intergenic
TCTCATCATGCCAGGTTGTT+TGG 0.296000 3_4:-76820298 Msa0523480:CDS
GCAAGTGTGTGTGTATATTT+TGG 0.307264 3_4:-76822506 Msa0523480:five_prime_UTR
CTTGCGAGTTATAACAAATA+AGG 0.307272 3_4:-76820119 Msa0523480:CDS
TTGATTTATTATCTTGAATC+AGG 0.308616 3_4:+76818420 None:intergenic
GTAACAAGCTAGTTCTGTTT+TGG 0.310708 3_4:-76822079 Msa0523480:five_prime_UTR
CCTTATCAGCTTCTCTGTTA+TGG 0.316161 3_4:+76821604 None:intergenic
GGTGATTTCGATGCACCTTC+AGG 0.318756 3_4:+76818611 None:intergenic
GGGTAACTTCTTGTCAAGTT+TGG 0.320273 3_4:-76819861 Msa0523480:CDS
AACTTGTGATGCAGATTTAG+AGG 0.322889 3_4:-76818123 Msa0523480:CDS
AGAACTCCTGATAAAATTAC+TGG 0.324430 3_4:+76818040 None:intergenic
AATTCTTTGGCAACCTAAAC+CGG 0.326494 3_4:+76818252 None:intergenic
GTGATGGCCGTTGCTGATAT+TGG 0.327958 3_4:-76820064 Msa0523480:CDS
TTGATTCAGAGTTGAGATTA+GGG 0.328089 3_4:+76818685 None:intergenic
GTTTGCCTGGTCGAGTTTAT+AGG 0.330034 3_4:-76821367 Msa0523480:five_prime_UTR
TTCATTCTCTTGGCCTGCCT+TGG 0.333817 3_4:-76821825 Msa0523480:five_prime_UTR
GGTGTTCACCAAGTGTTTCC+TGG 0.335547 3_4:+76818375 None:intergenic
GTATTAAGCGTTGGCCTTCT+CGG 0.340723 3_4:-76818847 Msa0523480:CDS
CAAGAAAGTCTTACTTTAAG+AGG 0.342735 3_4:-76819923 Msa0523480:CDS
TCAAAGATTGGATTGGAAAA+AGG 0.346376 3_4:+76821851 None:intergenic
GTTTGAGTTTAAGACTCATT+TGG 0.347090 3_4:-76821687 Msa0523480:five_prime_UTR
ACAAGGGAGCAGGACATGTT+TGG 0.349788 3_4:-76821220 Msa0523480:five_prime_UTR
TTCCTTCTATTCAAAATTCT+CGG 0.352144 3_4:-76818738 Msa0523480:CDS
CTATCGTCTCCAAATTTATC+AGG 0.353197 3_4:-76818713 Msa0523480:CDS
ATGGAGCATCACTTGTTAAT+AGG 0.355386 3_4:-76820409 Msa0523480:CDS
GGTAACTTCTTGTCAAGTTT+GGG 0.360621 3_4:-76819860 Msa0523480:CDS
TTTGAGTTTAAGACTCATTT+GGG 0.363096 3_4:-76821686 Msa0523480:five_prime_UTR
AAAGATGCTGCAAAGAATAT+TGG 0.364050 3_4:-76819749 Msa0523480:CDS
GAGTTGGTGGCGGGTTTGCC+TGG 0.366616 3_4:-76821380 Msa0523480:five_prime_UTR
CACCTGATGTTCGATTCTTC+AGG 0.370588 3_4:-76821317 Msa0523480:five_prime_UTR
AGGGTGGTTCCTGATAAATT+TGG 0.376289 3_4:+76818704 None:intergenic
GAGACGAGAAAACCCGGTTT+AGG 0.376446 3_4:-76818265 Msa0523480:CDS
TCTTTGACCCTTCATTCTCT+TGG 0.378297 3_4:-76821835 Msa0523480:five_prime_UTR
GTGAAGGGGTTAGTAGGTTG+TGG 0.382908 3_4:-76821664 Msa0523480:five_prime_UTR
CAAGAGGATGGCTGTCTCAT+TGG 0.386966 3_4:-76820005 Msa0523480:CDS
GTGGGTCTCTTGCATCCAAC+AGG 0.388191 3_4:-76820542 Msa0523480:CDS
TTCCAGCGAAATATTGTCTA+AGG 0.388915 3_4:+76819777 None:intergenic
TTAATAGGTCAAGGTGTTGC+CGG 0.393576 3_4:-76820394 Msa0523480:CDS
CATAGAGTAAAAGTTACATT+TGG 0.399282 3_4:-76818287 Msa0523480:CDS
ACAACACAGCAGAGCAACTA+TGG 0.400513 3_4:-76821177 Msa0523480:CDS
GAGTGTTCTCCTTCCGTTGA+GGG 0.401877 3_4:-76819881 Msa0523480:CDS
CCATAACAGAGAAGCTGATA+AGG 0.402380 3_4:-76821604 Msa0523480:five_prime_UTR
AGTGGATCAAAGATTTCAAT+AGG 0.403479 3_4:-76821574 Msa0523480:five_prime_UTR
CGAACATCAGGTGTCCAATC+AGG 0.407323 3_4:+76821327 None:intergenic
AGTTATAACAAATAAGGAAT+TGG 0.408257 3_4:-76820113 Msa0523480:CDS
CGGCTTTCCTGTTCAGTACA+TGG 0.410252 3_4:+76821749 None:intergenic
GGTTTAGGTTGCCAAAGAAT+TGG 0.416151 3_4:-76818250 Msa0523480:CDS
CTCGGGTAGTGCGGTTTCAT+AGG 0.417672 3_4:+76820621 None:intergenic
GAAATCTTTGATCCACTTGA+GGG 0.419150 3_4:+76821580 None:intergenic
GTCTGGTAACAAAGATTCAT+TGG 0.422317 3_4:-76818504 Msa0523480:CDS
TGCTCGTTGTTCTCCAAGGC+AGG 0.422575 3_4:+76821812 None:intergenic
GAGAATGAAGGGTCAAAGAT+TGG 0.423559 3_4:+76821839 None:intergenic
AGATCATTAGCTCTCAGAAT+TGG 0.423575 3_4:+76821497 None:intergenic
AACAATGTCTAGAAAGTTCT+CGG 0.424847 3_4:-76819960 Msa0523480:intron
ATTTGGGTGAAGGGGTTAGT+AGG 0.424980 3_4:-76821670 Msa0523480:five_prime_UTR
TGGAGCTTCCATCATGGTAT+TGG 0.425349 3_4:+76821982 None:intergenic
GATATCTCACAGAGATTTCT+CGG 0.426588 3_4:+76821432 None:intergenic
CAAGGGAGCAGGACATGTTT+GGG 0.427327 3_4:-76821219 Msa0523480:five_prime_UTR
TGCTCCTCCATGTACTGAAC+AGG 0.433075 3_4:-76821756 Msa0523480:five_prime_UTR
CTCGTCATTGACTCGGTTCA+AGG 0.434191 3_4:-76818785 Msa0523480:CDS
GGGCTCAACGAATCGGGATC+TGG 0.434923 3_4:+76818632 None:intergenic
TAATAGGTCAAGGTGTTGCC+GGG 0.435218 3_4:-76820393 Msa0523480:CDS
ACCTTCAGGGCTCAACGAAT+CGG 0.436452 3_4:+76818625 None:intergenic
TGGTTGGAAGCTTCTGCTGA+TGG 0.437275 3_4:-76821899 Msa0523480:five_prime_UTR
ACACGGAACATTAGCGGTTC+CGG 0.438801 3_4:-76821250 Msa0523480:five_prime_UTR
CTCGTGCCGAACATCATTGC+CGG 0.439855 3_4:+76821787 None:intergenic
GTTGTTGATCTCAGCAGCTC+TGG 0.440941 3_4:-76820766 Msa0523480:CDS
CTATCATCCCCTCTATTAAC+CGG 0.442227 3_4:+76821521 None:intergenic
AGATTCAGTGGATTCCTGAT+TGG 0.445574 3_4:-76821341 Msa0523480:five_prime_UTR
TTGTAATTTACAATCACAAA+AGG 0.447067 3_4:+76817996 None:intergenic
ATTGTCCATGATTATTCAAA+GGG 0.447950 3_4:-76820152 Msa0523480:CDS
ATTTGGACGATGATTATGAA+TGG 0.449463 3_4:-76818154 Msa0523480:CDS
CTCAGAACCTCTTGAATCTC+GGG 0.451350 3_4:+76820604 None:intergenic
GGCTGTATGCTTAATGAGAC+TGG 0.451702 3_4:+76818653 None:intergenic
AGATATGCTTATACAAATAT+GGG 0.453741 3_4:-76821546 Msa0523480:five_prime_UTR
CCTTCAGGGCTCAACGAATC+GGG 0.455000 3_4:+76818626 None:intergenic
GACTCAAAGGAGTTGGTGGC+GGG 0.455558 3_4:-76821389 Msa0523480:five_prime_UTR
GGAACATGAATGGCTTGAAT+AGG 0.455976 3_4:+76818565 None:intergenic
TGCAAACAGTCTCAAGTTCA+CGG 0.457700 3_4:+76821154 None:intergenic
CTGAGATACTATAGATGCTT+CGG 0.458538 3_4:+76820248 None:intergenic
CAGCATTATTAACTATAATC+CGG 0.460364 3_4:+76821729 None:intergenic
CATTGTCCATGATTATTCAA+AGG 0.467851 3_4:-76820153 Msa0523480:CDS
GATCCACCAGGTCCTGGATT+AGG 0.474573 3_4:+76821629 None:intergenic
AGCAACCCGGCAATGATGTT+CGG 0.474729 3_4:-76821793 Msa0523480:five_prime_UTR
TGCATCCAACAGGGAAAAGA+TGG 0.475400 3_4:-76820532 Msa0523480:CDS
GAGGAGATGTTGACTGTGGT+AGG 0.478292 3_4:-76819904 Msa0523480:CDS
TAGAAGAAGCATACCCATCA+TGG 0.480856 3_4:-76822035 Msa0523480:five_prime_UTR
ACCACAAGATGAAAATTCAA+TGG 0.483142 3_4:-76821960 Msa0523480:five_prime_UTR
TGCAGCACCATCTCCCATGA+TGG 0.484116 3_4:+76822021 None:intergenic
GAGACCCACGTCTGAGCTAA+AGG 0.485407 3_4:+76820556 None:intergenic
GTGTTGTTGCTCTGACAAGC+TGG 0.486344 3_4:+76818544 None:intergenic
ATATGGGTGCCGGTTAATAG+AGG 0.486599 3_4:-76821530 Msa0523480:five_prime_UTR
CGGTTAATAGAGGGGATGAT+AGG 0.488453 3_4:-76821520 Msa0523480:five_prime_UTR
CATAACAGAGAAGCTGATAA+GGG 0.488496 3_4:-76821603 Msa0523480:five_prime_UTR
CTCCTGAAGAATCGAACATC+AGG 0.489431 3_4:+76821315 None:intergenic
AGGAGAGAAAAGACGGGCCA+AGG 0.490415 3_4:-76819825 Msa0523480:CDS
GTCCTTAGACAATATTTCGC+TGG 0.494295 3_4:-76819779 Msa0523480:CDS
TCTTAAACTCAAACTGCTGC+AGG 0.496219 3_4:+76821696 None:intergenic
TTTGGACGATGATTATGAAT+GGG 0.496780 3_4:-76818153 Msa0523480:CDS
GTGATTTCGATGCACCTTCA+GGG 0.498166 3_4:+76818612 None:intergenic
GGTAACAAAGATTCATTGGT+TGG 0.498700 3_4:-76818500 Msa0523480:CDS
GCACACCCTTTGAATAATCA+TGG 0.498968 3_4:+76820147 None:intergenic
ATGGAAGATCCACCAGGTCC+TGG 0.499029 3_4:+76821623 None:intergenic
TGAAGGGTCAAAGATTGGAT+TGG 0.499145 3_4:+76821844 None:intergenic
CACACAAACAATGTTGCGTC+TGG 0.501686 3_4:-76818521 Msa0523480:CDS
TCTCAGAACCTCTTGAATCT+CGG 0.503095 3_4:+76820603 None:intergenic
GGACTCAAAGGAGTTGGTGG+CGG 0.508229 3_4:-76821390 Msa0523480:five_prime_UTR
CAACTCTGAAAAGGATCTGC+AGG 0.508919 3_4:-76818877 Msa0523480:CDS
CCCGATTCGTTGAGCCCTGA+AGG 0.511003 3_4:-76818626 Msa0523480:CDS
AGGAGATGTTGACTGTGGTA+GGG 0.511843 3_4:-76819903 Msa0523480:CDS
AGTTTGGGAGTAAATAGAAC+AGG 0.512927 3_4:-76819845 Msa0523480:CDS
CTGACAAGCTGGAACATGAA+TGG 0.515320 3_4:+76818555 None:intergenic
TCTGTACTACAACTCTGAAA+AGG 0.515505 3_4:-76818886 Msa0523480:CDS
CACTCGCAAAGCGTCTCAAA+AGG 0.517406 3_4:-76818318 Msa0523480:CDS
GGGTTGCTCGTTGTTCTCCA+AGG 0.518849 3_4:+76821808 None:intergenic
GGGTTGCAGACAAAGTTTGA+TGG 0.518963 3_4:+76818064 None:intergenic
CGGATTATAGTTAATAATGC+TGG 0.519737 3_4:-76821728 Msa0523480:five_prime_UTR
TTAAGACTCATTTGGGTGAA+GGG 0.525792 3_4:-76821679 Msa0523480:five_prime_UTR
AGATTTCTCGGTACTTTGCA+AGG 0.526853 3_4:+76821444 None:intergenic
ATCCACTGTCTCATCATGCC+AGG 0.527462 3_4:-76820306 Msa0523480:CDS
TTTAAGACTCATTTGGGTGA+AGG 0.528588 3_4:-76821680 Msa0523480:five_prime_UTR
CGGTGTTTGAACAAGGGAGC+AGG 0.529135 3_4:-76821230 Msa0523480:five_prime_UTR
TGAAATCTTTGATCCACTTG+AGG 0.531373 3_4:+76821579 None:intergenic
GCGGTTCCGGTGTTTGAACA+AGG 0.534054 3_4:-76821237 Msa0523480:five_prime_UTR
GGTCCTGGATTAGGCGTTGG+TGG 0.534809 3_4:+76821638 None:intergenic
AAGGCAGGCCAAGAGAATGA+AGG 0.539487 3_4:+76821827 None:intergenic
GCTTATACAAATATGGGTGC+CGG 0.542004 3_4:-76821540 Msa0523480:five_prime_UTR
AACAGGGAAAAGATGGCTGC+CGG 0.543888 3_4:-76820525 Msa0523480:CDS
AGCTGATAAGGGCCCTCAAG+TGG 0.545368 3_4:-76821592 Msa0523480:five_prime_UTR
ACTCGGTTCAAGGTGCCTCT+GGG 0.547073 3_4:-76818775 Msa0523480:CDS
TGTAATTATCATCAGAGTGC+CGG 0.547779 3_4:+76820506 None:intergenic
TAATAAGGACTTGCGATACT+CGG 0.548860 3_4:+76818346 None:intergenic
CTTATCCTATAAACTCGACC+AGG 0.549056 3_4:+76821362 None:intergenic
CATGCCAAGATCACAAAGCC+AGG 0.549068 3_4:-76818393 Msa0523480:CDS
TGCTGCAGATGTAATTCAGT+CGG 0.549867 3_4:-76820038 Msa0523480:CDS
CCAGGTCCTGGATTAGGCGT+TGG 0.550312 3_4:+76821635 None:intergenic
GGAGGACTCAAAGGAGTTGG+TGG 0.551490 3_4:-76821393 Msa0523480:five_prime_UTR
ATTCTTTGGCAACCTAAACC+GGG 0.552603 3_4:+76818253 None:intergenic
TTTGTTAGATGGTTGTTGGT+TGG 0.554167 3_4:-76821915 Msa0523480:five_prime_UTR
CTTATCATCTAATGAAGTGA+TGG 0.555317 3_4:-76820080 Msa0523480:CDS
CTCTTGAATCTCGGGTAGTG+CGG 0.556527 3_4:+76820612 None:intergenic
TGCAGAGGTGGAGGACTCAA+AGG 0.557266 3_4:-76821402 Msa0523480:five_prime_UTR
ATTCCACCAACGCCTAATCC+AGG 0.557897 3_4:-76821641 Msa0523480:five_prime_UTR
CATTTGGAGACGAGAAAACC+CGG 0.558546 3_4:-76818271 Msa0523480:CDS
TAAATGTTTCAGCTACCAAA+CGG 0.559360 3_4:+76822111 None:intergenic
TAAGACTCATTTGGGTGAAG+GGG 0.560800 3_4:-76821678 Msa0523480:five_prime_UTR
GTTTGTCATAAAAGCACCCC+CGG 0.561641 3_4:+76820375 None:intergenic
GGTGGAGGACTCAAAGGAGT+TGG 0.562364 3_4:-76821396 Msa0523480:five_prime_UTR
TTACACACACTGTATATCTC+CGG 0.564968 3_4:-76820488 Msa0523480:CDS
TCGTGCCGAACATCATTGCC+GGG 0.569558 3_4:+76821788 None:intergenic
CTTGCTTAAAGAAGTAATGT+CGG 0.569630 3_4:+76820336 None:intergenic
ATCTTGTGCAGGAAATTGCT+AGG 0.569881 3_4:-76818217 Msa0523480:CDS
GATGCTGCAAAGAATATTGG+CGG 0.571710 3_4:-76819746 Msa0523480:intron
GACTGTTTGCAAAGCGCTAG+AGG 0.574356 3_4:-76821142 Msa0523480:intron
TTGTGGTGGAGCTTCCATCA+TGG 0.576729 3_4:+76821976 None:intergenic
AGACAGCCATCCTCTTGTGT+TGG 0.577568 3_4:+76820011 None:intergenic
ATCTGCAACCAATACCATGA+TGG 0.578563 3_4:-76821990 Msa0523480:five_prime_UTR
GGCAACACGGTATTAAGCGT+TGG 0.579088 3_4:-76818856 Msa0523480:CDS
GTGTTATGAAGATCTTGTGC+AGG 0.580834 3_4:-76818228 Msa0523480:CDS
AGCATACCCATCATGGGAGA+TGG 0.583903 3_4:-76822028 Msa0523480:five_prime_UTR
ATAGAACAGGAGAGAAAAGA+CGG 0.585692 3_4:-76819832 Msa0523480:CDS
CATGTACTGAACAGGAAAGC+CGG 0.586722 3_4:-76821748 Msa0523480:five_prime_UTR
CATCACTTGTTAATAGGTCA+AGG 0.586973 3_4:-76820403 Msa0523480:CDS
TGTCGGTTGAGAAGCACGGT+TGG 0.589014 3_4:+76820353 None:intergenic
CGGTTCCGGTGTTTGAACAA+GGG 0.589544 3_4:-76821236 Msa0523480:five_prime_UTR
TATGGGTGCCGGTTAATAGA+GGG 0.590546 3_4:-76821529 Msa0523480:five_prime_UTR
TCACAAAGCCAGGAAACACT+TGG 0.593082 3_4:-76818383 Msa0523480:CDS
AGGATGGCTGTCTCATTGGA+TGG 0.593239 3_4:-76820001 Msa0523480:CDS
ACTCCTGATAAAATTACTGG+AGG 0.593662 3_4:+76818043 None:intergenic
AGGCAGGCCAAGAGAATGAA+GGG 0.595697 3_4:+76821828 None:intergenic
TTGTTATAACTCGCAAGCTG+CGG 0.597685 3_4:+76820125 None:intergenic
AGCTCGCAATCCAAACAACC+TGG 0.599497 3_4:+76820288 None:intergenic
GGAAGTCTGACTACATGAAG+AGG 0.601423 3_4:+76818586 None:intergenic
ACTTCAACTCGTCATTGACT+CGG 0.601900 3_4:-76818792 Msa0523480:CDS
AATAGGTCAAGGTGTTGCCG+GGG 0.604344 3_4:-76820392 Msa0523480:CDS
AGAAGAAGCATACCCATCAT+GGG 0.605534 3_4:-76822034 Msa0523480:five_prime_UTR
CTCCTGATAAAATTACTGGA+GGG 0.605907 3_4:+76818044 None:intergenic
GCAGCACCATCTCCCATGAT+GGG 0.606072 3_4:+76822022 None:intergenic
CTAGAAAGTTCTCGGAACAA+AGG 0.606403 3_4:-76819952 Msa0523480:intron
CAGACGCAACATTGTTTGTG+TGG 0.607061 3_4:+76818522 None:intergenic
GTTTATAGGATAAGATTCAG+TGG 0.609211 3_4:-76821353 Msa0523480:five_prime_UTR
AGCAAATCCAATATCAGCAA+CGG 0.611864 3_4:+76820057 None:intergenic
GGAGTGTTCTCCTTCCGTTG+AGG 0.611994 3_4:-76819882 Msa0523480:CDS
CCAACGCCTAATCCAGGACC+TGG 0.614235 3_4:-76821635 Msa0523480:five_prime_UTR
CTGCTCCCTTGTTCAAACAC+CGG 0.615580 3_4:+76821231 None:intergenic
TGATGTACACGGAACATTAG+CGG 0.615722 3_4:-76821256 Msa0523480:five_prime_UTR
TCTGTTATGGAAGATCCACC+AGG 0.616650 3_4:+76821617 None:intergenic
AATTGCCTTTAGCTCAGACG+TGG 0.620316 3_4:-76820561 Msa0523480:CDS
TGACAAGAAGTTACCCTCAA+CGG 0.620322 3_4:+76819868 None:intergenic
TCGCAAAGCGTCTCAAAAGG+AGG 0.621421 3_4:-76818315 Msa0523480:CDS
TTGGAGAACAACGAGCAACC+CGG 0.622537 3_4:-76821806 Msa0523480:five_prime_UTR
ATAGATGCTTCGGAGTCGAA+TGG 0.625235 3_4:+76820258 None:intergenic
ATGATTCACATGCATGACAA+AGG 0.628676 3_4:+76817970 None:intergenic
AGTCGGAACTCCAACACAAG+AGG 0.629939 3_4:-76820021 Msa0523480:CDS
GACGAGTTGAAGTTTCTGCA+AGG 0.629978 3_4:+76818802 None:intergenic
TTCTAGTATATAATAAGGAT+AGG 0.630264 3_4:+76817818 None:intergenic
ATTCAGAGTTGAGATTAGGG+TGG 0.634639 3_4:+76818688 None:intergenic
ACATAGCAAGCATACTCCAC+CGG 0.635320 3_4:+76820469 None:intergenic
GTACATCACACTCTTGAGCA+TGG 0.639396 3_4:+76821271 None:intergenic
GCTCAAGAGTGTGATGTACA+CGG 0.639508 3_4:-76821267 Msa0523480:five_prime_UTR
CATCTTATGATAAAAGGACA+AGG 0.639708 3_4:-76822145 Msa0523480:five_prime_UTR
TCTTGAGCATGGTCAACTCG+TGG 0.640513 3_4:+76821282 None:intergenic
CGCACTACCCGAGATTCAAG+AGG 0.642440 3_4:-76820611 Msa0523480:CDS
GTCTGACTACATGAAGAGGA+AGG 0.643172 3_4:+76818590 None:intergenic
AAGAAGTTACCCTCAACGGA+AGG 0.646367 3_4:+76819872 None:intergenic
TAGAACAGGAGAGAAAAGAC+GGG 0.649215 3_4:-76819831 Msa0523480:CDS
GGAACTCCAACACAAGAGGA+TGG 0.651641 3_4:-76820017 Msa0523480:CDS
AAAAGGATCTGCAGGCAACA+CGG 0.653871 3_4:-76818869 Msa0523480:CDS
CTTTCCTGTTCAGTACATGG+AGG 0.656242 3_4:+76821752 None:intergenic
GAAAGTTCTCGGAACAAAGG+CGG 0.656927 3_4:-76819949 Msa0523480:CDS
CACACACTGTATATCTCCGG+TGG 0.659877 3_4:-76820485 Msa0523480:CDS
ATTGCCTTTAGCTCAGACGT+GGG 0.661550 3_4:-76820560 Msa0523480:CDS
ATAGGTCAAGGTGTTGCCGG+GGG 0.662191 3_4:-76820391 Msa0523480:CDS
TTCAAGTCTTCAGAATGTGA+AGG 0.663202 3_4:-76820740 Msa0523480:intron
ATGTTTGGGAGTTATTGAAG+TGG 0.676259 3_4:-76821205 Msa0523480:five_prime_UTR
TTAAGAGGAGATGTTGACTG+TGG 0.679381 3_4:-76819908 Msa0523480:CDS
ATGGGTGCCGGTTAATAGAG+GGG 0.680121 3_4:-76821528 Msa0523480:five_prime_UTR
TGGGTCTCTTGCATCCAACA+GGG 0.683646 3_4:-76820541 Msa0523480:CDS
ACGCCTAATCCAGGACCTGG+TGG 0.693296 3_4:-76821632 Msa0523480:five_prime_UTR
GTAATGTCGGTTGAGAAGCA+CGG 0.695561 3_4:+76820349 None:intergenic
ATCAATTTGAAATGACCCAG+AGG 0.697023 3_4:+76818760 None:intergenic
AACCTGGCATGATGAGACAG+TGG 0.699432 3_4:+76820304 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAATTTGATTTCAT+TGG + chr3_4:76817847-76817866 None:intergenic 10.0%
!!! AAAAAAAAAAAATGGAATTT+TGG + chr3_4:76822591-76822610 None:intergenic 10.0%
!!! AAATTCCATTTTTTTTTTTT+TGG - chr3_4:76822591-76822610 Msa0523480:five_prime_UTR 10.0%
!! ATAAAAATAAAATACATGGT+TGG - chr3_4:76817861-76817880 Msa0523480:three_prime_UTR 15.0%
!! TAAAAATAAAATACATGGTT+GGG - chr3_4:76817862-76817881 Msa0523480:three_prime_UTR 15.0%
!! AAAGAGAATTTATTCAAAAA+AGG + chr3_4:76818097-76818116 None:intergenic 15.0%
!! AGTACAAAAAAATAATATAG+GGG + chr3_4:76820925-76820944 None:intergenic 15.0%
!! CAGTACAAAAAAATAATATA+GGG + chr3_4:76820926-76820945 None:intergenic 15.0%
!! TCAGTACAAAAAAATAATAT+AGG + chr3_4:76820927-76820946 None:intergenic 15.0%
!! ACATTATGTAAAACTTAATT+TGG + chr3_4:76820998-76821017 None:intergenic 15.0%
!!! TTTACATTTAATTCACTTTT+AGG - chr3_4:76821447-76821466 Msa0523480:five_prime_UTR 15.0%
!! TCAAACCAAAAAAAAAAAAA+TGG + chr3_4:76822599-76822618 None:intergenic 15.0%
!! TAAATTCTCTTTACGTTTAA+AGG - chr3_4:76818105-76818124 Msa0523480:CDS 20.0%
!! ACAACGAATAATATGAAAAA+AGG + chr3_4:76818234-76818253 None:intergenic 20.0%
!! AAGATATGCTTATACAAATA+TGG - chr3_4:76818942-76818961 Msa0523480:intron 20.0%
!! AGATATGCTTATACAAATAT+GGG - chr3_4:76818943-76818962 Msa0523480:intron 20.0%
!!! TTTTAGAACAGTGAATTTAA+GGG - chr3_4:76819476-76819495 Msa0523480:intron 20.0%
!! TTATATTGAAATGTGTAACA+AGG + chr3_4:76819595-76819614 None:intergenic 20.0%
!! CATTTCAATATAAATGCTTA+TGG - chr3_4:76819602-76819621 Msa0523480:intron 20.0%
!! AGTTATAACAAATAAGGAAT+TGG - chr3_4:76820376-76820395 Msa0523480:CDS 20.0%
!!! TTTTTTTGTACTGAACATAT+AGG - chr3_4:76820933-76820952 Msa0523480:intron 20.0%
!!! TTTTACATAATGTGACTTAA+AGG - chr3_4:76821005-76821024 Msa0523480:intron 20.0%
!! TCTAACTTGAAATTAGAATT+TGG - chr3_4:76821381-76821400 Msa0523480:five_prime_UTR 20.0%
!! TTGATTTATTATCTTGAATC+AGG + chr3_4:76822072-76822091 None:intergenic 20.0%
!! CAAATTCGATATCAAATATT+TGG - chr3_4:76822318-76822337 Msa0523480:intron 20.0%
!! TTGTAATTTACAATCACAAA+AGG + chr3_4:76822496-76822515 None:intergenic 20.0%
!!! TATTTTGTTACAACATTGTA+AGG - chr3_4:76822630-76822649 Msa0523480:five_prime_UTR 20.0%
! CCAGTAAATGAAAAAATGAA+AGG + chr3_4:76817945-76817964 None:intergenic 25.0%
!!! CCTTTCATTTTTTCATTTAC+TGG - chr3_4:76817942-76817961 Msa0523480:three_prime_UTR 25.0%
!! AGAGAATCTTTTTATGAGTA+TGG - chr3_4:76818010-76818029 Msa0523480:exon 25.0%
! TCATTCTATATAGTCAAAAG+AGG + chr3_4:76818175-76818194 None:intergenic 25.0%
! TTCTCACATCTTATGATAAA+AGG - chr3_4:76818338-76818357 Msa0523480:CDS 25.0%
! CAGCATTATTAACTATAATC+CGG + chr3_4:76818763-76818782 None:intergenic 25.0%
!! TTTGAGTTTAAGACTCATTT+GGG - chr3_4:76818803-76818822 Msa0523480:CDS 25.0%
!!! TCTTTGTTTCAAGTTCTTTT+GGG + chr3_4:76819448-76819467 None:intergenic 25.0%
!!! TTCTTTGTTTCAAGTTCTTT+TGG + chr3_4:76819449-76819468 None:intergenic 25.0%
! AACTTGAAACAAAGAACTTA+TGG - chr3_4:76819453-76819472 Msa0523480:intron 25.0%
!!! GTTTTAGAACAGTGAATTTA+AGG - chr3_4:76819475-76819494 Msa0523480:intron 25.0%
!! ACTTTTACATATTGAATTGC+TGG - chr3_4:76819542-76819561 Msa0523480:intron 25.0%
! TTTGATGAGCTTTACATATA+TGG + chr3_4:76819647-76819666 None:intergenic 25.0%
!! TCAATACTAGTTTAATGATC+TGG - chr3_4:76819680-76819699 Msa0523480:intron 25.0%
!! CAATACTAGTTTAATGATCT+GGG - chr3_4:76819681-76819700 Msa0523480:intron 25.0%
!! AATACTAGTTTAATGATCTG+GGG - chr3_4:76819682-76819701 Msa0523480:intron 25.0%
!!! AAAATATAACCAGTTTGTTG+AGG + chr3_4:76819830-76819849 None:intergenic 25.0%
!! TCAACAAACTGGTTATATTT+TGG - chr3_4:76819829-76819848 Msa0523480:CDS 25.0%
! ATTGTCCATGATTATTCAAA+GGG - chr3_4:76820337-76820356 Msa0523480:CDS 25.0%
!! TTTTCTATTGACATGCTAAA+TGG + chr3_4:76820824-76820843 None:intergenic 25.0%
! AAAATTGATGAGTAGAACAT+AGG + chr3_4:76820875-76820894 None:intergenic 25.0%
! AACAAAATCTTAAAGGACTA+CGG - chr3_4:76821042-76821061 Msa0523480:intron 25.0%
!!! TAAATTAGCTCTAACGTTTA+AGG - chr3_4:76821258-76821277 Msa0523480:five_prime_UTR 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr3_4:76821337-76821356 Msa0523480:five_prime_UTR 25.0%
! AATGTAAAACAATAAACCCA+TGG + chr3_4:76821435-76821454 None:intergenic 25.0%
! GAAAAATTCAATTCAACAGA+TGG + chr3_4:76821581-76821600 None:intergenic 25.0%
! TTCCTTCTATTCAAAATTCT+CGG - chr3_4:76821751-76821770 Msa0523480:five_prime_UTR 25.0%
!!! TTTGCGAGTGTTTTTTAATA+AGG + chr3_4:76822161-76822180 None:intergenic 25.0%
! CATAGAGTAAAAGTTACATT+TGG - chr3_4:76822202-76822221 Msa0523480:intron 25.0%
GCAACGAATAAAAAGATTCT+CGG + chr3_4:76817893-76817912 None:intergenic 30.0%
!!! TATGGCTATTACACTTTTTC+TGG - chr3_4:76818028-76818047 Msa0523480:CDS 30.0%
TCTAAATTCACTGAAGCAAA+AGG + chr3_4:76818070-76818089 None:intergenic 30.0%
ACTGACATCATTAACAACTT+TGG - chr3_4:76818306-76818325 Msa0523480:CDS 30.0%
CATCTTATGATAAAAGGACA+AGG - chr3_4:76818344-76818363 Msa0523480:CDS 30.0%
TAAATGTTTCAGCTACCAAA+CGG + chr3_4:76818381-76818400 None:intergenic 30.0%
! ATTGAATTTTCATCTTGTGG+TGG + chr3_4:76818530-76818549 None:intergenic 30.0%
ACCACAAGATGAAAATTCAA+TGG - chr3_4:76818529-76818548 Msa0523480:CDS 30.0%
! TCCATTGAATTTTCATCTTG+TGG + chr3_4:76818533-76818552 None:intergenic 30.0%
! ATGAGTGAACTTTTGTTAGA+TGG - chr3_4:76818563-76818582 Msa0523480:CDS 30.0%
! AACTTTTGTTAGATGGTTGT+TGG - chr3_4:76818570-76818589 Msa0523480:CDS 30.0%
! TCAAAGATTGGATTGGAAAA+AGG + chr3_4:76818641-76818660 None:intergenic 30.0%
CGGATTATAGTTAATAATGC+TGG - chr3_4:76818761-76818780 Msa0523480:CDS 30.0%
! GTTTGAGTTTAAGACTCATT+TGG - chr3_4:76818802-76818821 Msa0523480:CDS 30.0%
AGTGGATCAAAGATTTCAAT+AGG - chr3_4:76818915-76818934 Msa0523480:intron 30.0%
!! TTCCTTTTTCACTTGAATCA+AGG - chr3_4:76819014-76819033 Msa0523480:intron 30.0%
GTTTATAGGATAAGATTCAG+TGG - chr3_4:76819136-76819155 Msa0523480:intron 30.0%
!! GCATAGAGTTTTTGTTTGTT+TGG - chr3_4:76819389-76819408 Msa0523480:intron 30.0%
!!! GTCATTTTTTACAACACACA+AGG - chr3_4:76819413-76819432 Msa0523480:intron 30.0%
GGAGCAATTTAATCATAAGA+GGG + chr3_4:76819574-76819593 None:intergenic 30.0%
AGGAGCAATTTAATCATAAG+AGG + chr3_4:76819575-76819594 None:intergenic 30.0%
ATGTAAAGCTCATCAAAAGT+CGG - chr3_4:76819650-76819669 Msa0523480:intron 30.0%
TACATAGAAAATCATCTCTG+TGG - chr3_4:76819772-76819791 Msa0523480:CDS 30.0%
CTTGCTTAAAGAAGTAATGT+CGG + chr3_4:76820156-76820175 None:intergenic 30.0%
CATTGTCCATGATTATTCAA+AGG - chr3_4:76820336-76820355 Msa0523480:CDS 30.0%
CTTGCGAGTTATAACAAATA+AGG - chr3_4:76820370-76820389 Msa0523480:CDS 30.0%
CTTATCATCTAATGAAGTGA+TGG - chr3_4:76820409-76820428 Msa0523480:CDS 30.0%
AACAATGTCTAGAAAGTTCT+CGG - chr3_4:76820529-76820548 Msa0523480:CDS 30.0%
CAAGAAAGTCTTACTTTAAG+AGG - chr3_4:76820566-76820585 Msa0523480:CDS 30.0%
AAAGATGCTGCAAAGAATAT+TGG - chr3_4:76820740-76820759 Msa0523480:intron 30.0%
!! ATTTTTGTTTGCAAACACCA+AGG - chr3_4:76820796-76820815 Msa0523480:intron 30.0%
GAGACAGAACAAAATCTTAA+AGG - chr3_4:76821035-76821054 Msa0523480:intron 30.0%
!! ATGAGGTTTTGCTATATGTT+TGG + chr3_4:76821113-76821132 None:intergenic 30.0%
AAACATATAGCAAAACCTCA+TGG - chr3_4:76821112-76821131 Msa0523480:intron 30.0%
ATGAGCATATTTGCCTATTT+GGG + chr3_4:76821160-76821179 None:intergenic 30.0%
!!! TACAGTTGATTTTTAGCCAT+GGG - chr3_4:76821416-76821435 Msa0523480:five_prime_UTR 30.0%
! ATCCGAGAATTTTGAATAGA+AGG + chr3_4:76821756-76821775 None:intergenic 30.0%
TTGATTCAGAGTTGAGATTA+GGG + chr3_4:76821807-76821826 None:intergenic 30.0%
TCTTCATAACACCAATTCTT+TGG + chr3_4:76822253-76822272 None:intergenic 30.0%
ATTTGGACGATGATTATGAA+TGG - chr3_4:76822335-76822354 Msa0523480:intron 30.0%
TTTGGACGATGATTATGAAT+GGG - chr3_4:76822336-76822355 Msa0523480:intron 30.0%
AGAACTCCTGATAAAATTAC+TGG + chr3_4:76822452-76822471 None:intergenic 30.0%
! GCAAGTGTGTGTGTATATTT+TGG - chr3_4:76817983-76818002 Msa0523480:three_prime_UTR 35.0%
!! AGTGTGTGTGTATATTTTGG+TGG - chr3_4:76817986-76818005 Msa0523480:three_prime_UTR 35.0%
!! AAGGATTTTTCAGATCCGTT+TGG - chr3_4:76818363-76818382 Msa0523480:CDS 35.0%
!!! GTAACAAGCTAGTTCTGTTT+TGG - chr3_4:76818410-76818429 Msa0523480:CDS 35.0%
!!! AAGCTAGTTCTGTTTTGGTT+TGG - chr3_4:76818415-76818434 Msa0523480:CDS 35.0%
TTTGTTAGATGGTTGTTGGT+TGG - chr3_4:76818574-76818593 Msa0523480:CDS 35.0%
! TTTAAGACTCATTTGGGTGA+AGG - chr3_4:76818809-76818828 Msa0523480:CDS 35.0%
TTAAGACTCATTTGGGTGAA+GGG - chr3_4:76818810-76818829 Msa0523480:CDS 35.0%
CATAACAGAGAAGCTGATAA+GGG - chr3_4:76818886-76818905 Msa0523480:CDS 35.0%
GAAATCTTTGATCCACTTGA+GGG + chr3_4:76818912-76818931 None:intergenic 35.0%
TGAAATCTTTGATCCACTTG+AGG + chr3_4:76818913-76818932 None:intergenic 35.0%
! AGATCATTAGCTCTCAGAAT+TGG + chr3_4:76818995-76819014 None:intergenic 35.0%
GACCTTGATTCAAGTGAAAA+AGG + chr3_4:76819019-76819038 None:intergenic 35.0%
GATATCTCACAGAGATTTCT+CGG + chr3_4:76819060-76819079 None:intergenic 35.0%
ATGTTTGGGAGTTATTGAAG+TGG - chr3_4:76819284-76819303 Msa0523480:intron 35.0%
AAACTCTATGCAAACAAGCA+AGG + chr3_4:76819380-76819399 None:intergenic 35.0%
TTCAAGTCTTCAGAATGTGA+AGG - chr3_4:76819749-76819768 Msa0523480:CDS 35.0%
TCTCAATTTCCTCAACAAAC+TGG - chr3_4:76819818-76819837 Msa0523480:CDS 35.0%
!!! CAAACTGGTTATATTTTGGC+AGG - chr3_4:76819833-76819852 Msa0523480:CDS 35.0%
TGTAATTATCATCAGAGTGC+CGG + chr3_4:76819986-76820005 None:intergenic 35.0%
TTACACACACTGTATATCTC+CGG - chr3_4:76820001-76820020 Msa0523480:CDS 35.0%
!! TTGCTATGTTGGTGATTCTT+CGG - chr3_4:76820034-76820053 Msa0523480:CDS 35.0%
! ATGGAGCATCACTTGTTAAT+AGG - chr3_4:76820080-76820099 Msa0523480:CDS 35.0%
! CATCACTTGTTAATAGGTCA+AGG - chr3_4:76820086-76820105 Msa0523480:CDS 35.0%
CTGAGATACTATAGATGCTT+CGG + chr3_4:76820244-76820263 None:intergenic 35.0%
AGCAAATCCAATATCAGCAA+CGG + chr3_4:76820435-76820454 None:intergenic 35.0%
GGTAACTTCTTGTCAAGTTT+GGG - chr3_4:76820629-76820648 Msa0523480:CDS 35.0%
AGTTTGGGAGTAAATAGAAC+AGG - chr3_4:76820644-76820663 Msa0523480:intron 35.0%
ATAGAACAGGAGAGAAAAGA+CGG - chr3_4:76820657-76820676 Msa0523480:intron 35.0%
TTCCAGCGAAATATTGTCTA+AGG + chr3_4:76820715-76820734 None:intergenic 35.0%
AGATAGAATGCTTGTGTGTA+AGG + chr3_4:76820773-76820792 None:intergenic 35.0%
TATAGGGGAACGAAACATTA+AGG + chr3_4:76820910-76820929 None:intergenic 35.0%
AAAATACATCCTGCAGACTA+CGG + chr3_4:76821089-76821108 None:intergenic 35.0%
TCCCTTAATGTTTCCCAAAT+AGG - chr3_4:76821144-76821163 Msa0523480:CDS 35.0%
GCCTATTTGGGAAACATTAA+GGG + chr3_4:76821148-76821167 None:intergenic 35.0%
TGCCTATTTGGGAAACATTA+AGG + chr3_4:76821149-76821168 None:intergenic 35.0%
CATGAGCATATTTGCCTATT+TGG + chr3_4:76821161-76821180 None:intergenic 35.0%
GCTCATGTAATAAAACCTCA+TGG - chr3_4:76821174-76821193 Msa0523480:CDS 35.0%
TGTAATAAAACCTCATGGTC+TGG - chr3_4:76821179-76821198 Msa0523480:CDS 35.0%
AGAGAACAGAACTACATGAA+GGG + chr3_4:76821210-76821229 None:intergenic 35.0%
TGGCTAAAAATCAACTGTAG+AGG + chr3_4:76821415-76821434 None:intergenic 35.0%
!!! CTACAGTTGATTTTTAGCCA+TGG - chr3_4:76821415-76821434 Msa0523480:five_prime_UTR 35.0%
ATGAGACACTTGCATTTGTT+TGG + chr3_4:76821514-76821533 None:intergenic 35.0%
! TCTGTACTACAACTCTGAAA+AGG - chr3_4:76821603-76821622 Msa0523480:five_prime_UTR 35.0%
!!! ACCTTTTTTATCTTCCGAGA+AGG + chr3_4:76821659-76821678 None:intergenic 35.0%
TCTCGGAAGATAAAAAAGGT+TGG - chr3_4:76821659-76821678 Msa0523480:five_prime_UTR 35.0%
! ATCAATTTGAAATGACCCAG+AGG + chr3_4:76821732-76821751 None:intergenic 35.0%
CTATCGTCTCCAAATTTATC+AGG - chr3_4:76821776-76821795 Msa0523480:five_prime_UTR 35.0%
CTTGATTCAGAGTTGAGATT+AGG + chr3_4:76821808-76821827 None:intergenic 35.0%
GTCTGGTAACAAAGATTCAT+TGG - chr3_4:76821985-76822004 Msa0523480:five_prime_UTR 35.0%
GGTAACAAAGATTCATTGGT+TGG - chr3_4:76821989-76822008 Msa0523480:five_prime_UTR 35.0%
TAATAAGGACTTGCGATACT+CGG + chr3_4:76822146-76822165 None:intergenic 35.0%
AATTCTTTGGCAACCTAAAC+CGG + chr3_4:76822240-76822259 None:intergenic 35.0%
AACTTGTGATGCAGATTTAG+AGG - chr3_4:76822366-76822385 Msa0523480:intron 35.0%
! AACCCTCCAGTAATTTTATC+AGG - chr3_4:76822443-76822462 Msa0523480:intron 35.0%
CTCCTGATAAAATTACTGGA+GGG + chr3_4:76822448-76822467 None:intergenic 35.0%
ACTCCTGATAAAATTACTGG+AGG + chr3_4:76822449-76822468 None:intergenic 35.0%
ATGATTCACATGCATGACAA+AGG + chr3_4:76822522-76822541 None:intergenic 35.0%
!!! TTCTGTTTTGGTTTGGCTTG+TGG - chr3_4:76818422-76818441 Msa0523480:CDS 40.0%
! TAGAAGAAGCATACCCATCA+TGG - chr3_4:76818454-76818473 Msa0523480:CDS 40.0%
! AGAAGAAGCATACCCATCAT+GGG - chr3_4:76818455-76818474 Msa0523480:CDS 40.0%
ATCTGCAACCAATACCATGA+TGG - chr3_4:76818499-76818518 Msa0523480:CDS 40.0%
TGAAGGGTCAAAGATTGGAT+TGG + chr3_4:76818648-76818667 None:intergenic 40.0%
GAGAATGAAGGGTCAAAGAT+TGG + chr3_4:76818653-76818672 None:intergenic 40.0%
TCTTTGACCCTTCATTCTCT+TGG - chr3_4:76818654-76818673 Msa0523480:CDS 40.0%
TCTTAAACTCAAACTGCTGC+AGG + chr3_4:76818796-76818815 None:intergenic 40.0%
TAAGACTCATTTGGGTGAAG+GGG - chr3_4:76818811-76818830 Msa0523480:CDS 40.0%
CCTTATCAGCTTCTCTGTTA+TGG + chr3_4:76818888-76818907 None:intergenic 40.0%
CCATAACAGAGAAGCTGATA+AGG - chr3_4:76818885-76818904 Msa0523480:CDS 40.0%
GCTTATACAAATATGGGTGC+CGG - chr3_4:76818949-76818968 Msa0523480:intron 40.0%
CTATCATCCCCTCTATTAAC+CGG + chr3_4:76818971-76818990 None:intergenic 40.0%
AGATTTCTCGGTACTTTGCA+AGG + chr3_4:76819048-76819067 None:intergenic 40.0%
! GAGATATCAGTTTTCTGCAG+AGG - chr3_4:76819072-76819091 Msa0523480:intron 40.0%
! ATATCAGTTTTCTGCAGAGG+TGG - chr3_4:76819075-76819094 Msa0523480:intron 40.0%
CTTATCCTATAAACTCGACC+AGG + chr3_4:76819130-76819149 None:intergenic 40.0%
! AGATTCAGTGGATTCCTGAT+TGG - chr3_4:76819148-76819167 Msa0523480:intron 40.0%
TGATGTACACGGAACATTAG+CGG - chr3_4:76819233-76819252 Msa0523480:intron 40.0%
TGCAAACAGTCTCAAGTTCA+CGG + chr3_4:76819338-76819357 None:intergenic 40.0%
TCTCAGAACCTCTTGAATCT+CGG + chr3_4:76819889-76819908 None:intergenic 40.0%
!!! TTCGGTCAGGTTTTTTCATG+AGG - chr3_4:76820052-76820071 Msa0523480:CDS 40.0%
!!! GTTTTTTCATGAGGCTTGCA+TGG - chr3_4:76820061-76820080 Msa0523480:CDS 40.0%
!! TTAATAGGTCAAGGTGTTGC+CGG - chr3_4:76820095-76820114 Msa0523480:CDS 40.0%
TCACTGTCATTGCAATCTAC+AGG + chr3_4:76820293-76820312 None:intergenic 40.0%
GCACACCCTTTGAATAATCA+TGG + chr3_4:76820345-76820364 None:intergenic 40.0%
TTGTTATAACTCGCAAGCTG+CGG + chr3_4:76820367-76820386 None:intergenic 40.0%
TGCTGCAGATGTAATTCAGT+CGG - chr3_4:76820451-76820470 Msa0523480:intron 40.0%
CTAGAAAGTTCTCGGAACAA+AGG - chr3_4:76820537-76820556 Msa0523480:CDS 40.0%
! TTAAGAGGAGATGTTGACTG+TGG - chr3_4:76820581-76820600 Msa0523480:CDS 40.0%
TGACAAGAAGTTACCCTCAA+CGG + chr3_4:76820624-76820643 None:intergenic 40.0%
GGGTAACTTCTTGTCAAGTT+TGG - chr3_4:76820628-76820647 Msa0523480:CDS 40.0%
TAGAACAGGAGAGAAAAGAC+GGG - chr3_4:76820658-76820677 Msa0523480:intron 40.0%
! AGTGATAGTTTTCTCTGCCT+TGG + chr3_4:76820684-76820703 None:intergenic 40.0%
GTCCTTAGACAATATTTCGC+TGG - chr3_4:76820710-76820729 Msa0523480:intron 40.0%
GATGCTGCAAAGAATATTGG+CGG - chr3_4:76820743-76820762 Msa0523480:CDS 40.0%
TGACATGCTAAATGGTACCT+TGG + chr3_4:76820816-76820835 None:intergenic 40.0%
CGGACAGTTAAGCAACTTAA+AGG - chr3_4:76821062-76821081 Msa0523480:intron 40.0%
TATAGCAAAACCTCATGGTC+TGG - chr3_4:76821117-76821136 Msa0523480:intron 40.0%
CAGAGAACAGAACTACATGA+AGG + chr3_4:76821211-76821230 None:intergenic 40.0%
! TGGTTCTGCAGTGACAAAAA+TGG + chr3_4:76821494-76821513 None:intergenic 40.0%
GCCTTCTCGGAAGATAAAAA+AGG - chr3_4:76821655-76821674 Msa0523480:five_prime_UTR 40.0%
! ACTTCAACTCGTCATTGACT+CGG - chr3_4:76821697-76821716 Msa0523480:five_prime_UTR 40.0%
AGGGTGGTTCCTGATAAATT+TGG + chr3_4:76821788-76821807 None:intergenic 40.0%
ATTCAGAGTTGAGATTAGGG+TGG + chr3_4:76821804-76821823 None:intergenic 40.0%
GGAACATGAATGGCTTGAAT+AGG + chr3_4:76821927-76821946 None:intergenic 40.0%
ATTCTTTGGCAACCTAAACC+GGG + chr3_4:76822239-76822258 None:intergenic 40.0%
!! GGTTTAGGTTGCCAAAGAAT+TGG - chr3_4:76822239-76822258 Msa0523480:intron 40.0%
GTGTTATGAAGATCTTGTGC+AGG - chr3_4:76822261-76822280 Msa0523480:intron 40.0%
ATCTTGTGCAGGAAATTGCT+AGG - chr3_4:76822272-76822291 Msa0523480:intron 40.0%
TGGAGCTTCCATCATGGTAT+TGG + chr3_4:76818510-76818529 None:intergenic 45.0%
CTTTCCTGTTCAGTACATGG+AGG + chr3_4:76818740-76818759 None:intergenic 45.0%
CATGTACTGAACAGGAAAGC+CGG - chr3_4:76818741-76818760 Msa0523480:CDS 45.0%
! ATTTGGGTGAAGGGGTTAGT+AGG - chr3_4:76818819-76818838 Msa0523480:CDS 45.0%
TCTGTTATGGAAGATCCACC+AGG + chr3_4:76818875-76818894 None:intergenic 45.0%
!! ATATGGGTGCCGGTTAATAG+AGG - chr3_4:76818959-76818978 Msa0523480:intron 45.0%
!! TATGGGTGCCGGTTAATAGA+GGG - chr3_4:76818960-76818979 Msa0523480:intron 45.0%
CGGTTAATAGAGGGGATGAT+AGG - chr3_4:76818969-76818988 Msa0523480:intron 45.0%
GTTTGCCTGGTCGAGTTTAT+AGG - chr3_4:76819122-76819141 Msa0523480:intron 45.0%
CACCTGATGTTCGATTCTTC+AGG - chr3_4:76819172-76819191 Msa0523480:intron 45.0%
CTCCTGAAGAATCGAACATC+AGG + chr3_4:76819177-76819196 None:intergenic 45.0%
GTACATCACACTCTTGAGCA+TGG + chr3_4:76819221-76819240 None:intergenic 45.0%
! GCTCAAGAGTGTGATGTACA+CGG - chr3_4:76819222-76819241 Msa0523480:intron 45.0%
ACAACACAGCAGAGCAACTA+TGG - chr3_4:76819312-76819331 Msa0523480:intron 45.0%
!! GGGGAAAGTTGTTAACTTGC+AGG - chr3_4:76819701-76819720 Msa0523480:intron 45.0%
CTCAGAACCTCTTGAATCTC+GGG + chr3_4:76819888-76819907 None:intergenic 45.0%
! AATTGCCTTTAGCTCAGACG+TGG - chr3_4:76819928-76819947 Msa0523480:CDS 45.0%
! ATTGCCTTTAGCTCAGACGT+GGG - chr3_4:76819929-76819948 Msa0523480:CDS 45.0%
TGCATCCAACAGGGAAAAGA+TGG - chr3_4:76819957-76819976 Msa0523480:intron 45.0%
ACATAGCAAGCATACTCCAC+CGG + chr3_4:76820023-76820042 None:intergenic 45.0%
!! GTGGAGTATGCTTGCTATGT+TGG - chr3_4:76820023-76820042 Msa0523480:CDS 45.0%
!! ATGTTGGTGATTCTTCGGTC+AGG - chr3_4:76820039-76820058 Msa0523480:CDS 45.0%
!! TAATAGGTCAAGGTGTTGCC+GGG - chr3_4:76820096-76820115 Msa0523480:CDS 45.0%
!! GTTTGTCATAAAAGCACCCC+CGG + chr3_4:76820117-76820136 None:intergenic 45.0%
! GTAATGTCGGTTGAGAAGCA+CGG + chr3_4:76820143-76820162 None:intergenic 45.0%
TCTCATCATGCCAGGTTGTT+TGG - chr3_4:76820191-76820210 Msa0523480:CDS 45.0%
ATAGATGCTTCGGAGTCGAA+TGG + chr3_4:76820234-76820253 None:intergenic 45.0%
GAAAGTTCTCGGAACAAAGG+CGG - chr3_4:76820540-76820559 Msa0523480:CDS 45.0%
! AGGAGATGTTGACTGTGGTA+GGG - chr3_4:76820586-76820605 Msa0523480:CDS 45.0%
AAGAAGTTACCCTCAACGGA+AGG + chr3_4:76820620-76820639 None:intergenic 45.0%
! CAACTCTGAAAAGGATCTGC+AGG - chr3_4:76821612-76821631 Msa0523480:five_prime_UTR 45.0%
AAAAGGATCTGCAGGCAACA+CGG - chr3_4:76821620-76821639 Msa0523480:five_prime_UTR 45.0%
!! GTATTAAGCGTTGGCCTTCT+CGG - chr3_4:76821642-76821661 Msa0523480:five_prime_UTR 45.0%
! GACGAGTTGAAGTTTCTGCA+AGG + chr3_4:76821690-76821709 None:intergenic 45.0%
GGCTGTATGCTTAATGAGAC+TGG + chr3_4:76821839-76821858 None:intergenic 45.0%
GTGATTTCGATGCACCTTCA+GGG + chr3_4:76821880-76821899 None:intergenic 45.0%
GTCTGACTACATGAAGAGGA+AGG + chr3_4:76821902-76821921 None:intergenic 45.0%
GGAAGTCTGACTACATGAAG+AGG + chr3_4:76821906-76821925 None:intergenic 45.0%
CTGACAAGCTGGAACATGAA+TGG + chr3_4:76821937-76821956 None:intergenic 45.0%
CAGACGCAACATTGTTTGTG+TGG + chr3_4:76821970-76821989 None:intergenic 45.0%
CACACAAACAATGTTGCGTC+TGG - chr3_4:76821968-76821987 Msa0523480:five_prime_UTR 45.0%
!! GTTTCCTGGCTTTGTGATCT+TGG + chr3_4:76822103-76822122 None:intergenic 45.0%
TCACAAAGCCAGGAAACACT+TGG - chr3_4:76822106-76822125 Msa0523480:five_prime_UTR 45.0%
! ACTTGCGATACTCGGTTTTC+GGG + chr3_4:76822138-76822157 None:intergenic 45.0%
! GACTTGCGATACTCGGTTTT+CGG + chr3_4:76822139-76822158 None:intergenic 45.0%
CATTTGGAGACGAGAAAACC+CGG - chr3_4:76822218-76822237 Msa0523480:intron 45.0%
GGGTTGCAGACAAAGTTTGA+TGG + chr3_4:76822428-76822447 None:intergenic 45.0%
!! ATTAATAAAAATAAAATACA+TGG - chr3_4:76817857-76817876 Msa0523480:three_prime_UTR 5.0%
!!! ATATAATCAATTATTTTTTT+TGG + chr3_4:76821284-76821303 None:intergenic 5.0%
AGCATACCCATCATGGGAGA+TGG - chr3_4:76818461-76818480 Msa0523480:CDS 50.0%
! TTGTGGTGGAGCTTCCATCA+TGG + chr3_4:76818516-76818535 None:intergenic 50.0%
TGGTTGGAAGCTTCTGCTGA+TGG - chr3_4:76818590-76818609 Msa0523480:CDS 50.0%
AGGCAGGCCAAGAGAATGAA+GGG + chr3_4:76818664-76818683 None:intergenic 50.0%
AAGGCAGGCCAAGAGAATGA+AGG + chr3_4:76818665-76818684 None:intergenic 50.0%
TTCATTCTCTTGGCCTGCCT+TGG - chr3_4:76818664-76818683 Msa0523480:CDS 50.0%
TTGGAGAACAACGAGCAACC+CGG - chr3_4:76818683-76818702 Msa0523480:CDS 50.0%
AGCAACCCGGCAATGATGTT+CGG - chr3_4:76818696-76818715 Msa0523480:CDS 50.0%
TGCTCCTCCATGTACTGAAC+AGG - chr3_4:76818733-76818752 Msa0523480:CDS 50.0%
CGGCTTTCCTGTTCAGTACA+TGG + chr3_4:76818743-76818762 None:intergenic 50.0%
! GTGAAGGGGTTAGTAGGTTG+TGG - chr3_4:76818825-76818844 Msa0523480:CDS 50.0%
ATTCCACCAACGCCTAATCC+AGG - chr3_4:76818848-76818867 Msa0523480:CDS 50.0%
!! ATGGGTGCCGGTTAATAGAG+GGG - chr3_4:76818961-76818980 Msa0523480:intron 50.0%
! TCAGTTTTCTGCAGAGGTGG+AGG - chr3_4:76819078-76819097 Msa0523480:intron 50.0%
CGAACATCAGGTGTCCAATC+AGG + chr3_4:76819165-76819184 None:intergenic 50.0%
TCTTGAGCATGGTCAACTCG+TGG + chr3_4:76819210-76819229 None:intergenic 50.0%
ACACGGAACATTAGCGGTTC+CGG - chr3_4:76819239-76819258 Msa0523480:intron 50.0%
CGGTTCCGGTGTTTGAACAA+GGG - chr3_4:76819253-76819272 Msa0523480:intron 50.0%
CTGCTCCCTTGTTCAAACAC+CGG + chr3_4:76819261-76819280 None:intergenic 50.0%
ACAAGGGAGCAGGACATGTT+TGG - chr3_4:76819269-76819288 Msa0523480:intron 50.0%
CAAGGGAGCAGGACATGTTT+GGG - chr3_4:76819270-76819289 Msa0523480:intron 50.0%
! GACTGTTTGCAAAGCGCTAG+AGG - chr3_4:76819347-76819366 Msa0523480:intron 50.0%
GTTGTTGATCTCAGCAGCTC+TGG - chr3_4:76819723-76819742 Msa0523480:intron 50.0%
CTCTTGAATCTCGGGTAGTG+CGG + chr3_4:76819880-76819899 None:intergenic 50.0%
TGGGTCTCTTGCATCCAACA+GGG - chr3_4:76819948-76819967 Msa0523480:CDS 50.0%
AACAGGGAAAAGATGGCTGC+CGG - chr3_4:76819964-76819983 Msa0523480:intron 50.0%
CACACACTGTATATCTCCGG+TGG - chr3_4:76820004-76820023 Msa0523480:CDS 50.0%
!! AATAGGTCAAGGTGTTGCCG+GGG - chr3_4:76820097-76820116 Msa0523480:CDS 50.0%
ATCCACTGTCTCATCATGCC+AGG - chr3_4:76820183-76820202 Msa0523480:CDS 50.0%
AACCTGGCATGATGAGACAG+TGG + chr3_4:76820188-76820207 None:intergenic 50.0%
AGCTCGCAATCCAAACAACC+TGG + chr3_4:76820204-76820223 None:intergenic 50.0%
GTGATGGCCGTTGCTGATAT+TGG - chr3_4:76820425-76820444 Msa0523480:CDS 50.0%
AGTCGGAACTCCAACACAAG+AGG - chr3_4:76820468-76820487 Msa0523480:intron 50.0%
GGAACTCCAACACAAGAGGA+TGG - chr3_4:76820472-76820491 Msa0523480:intron 50.0%
AGACAGCCATCCTCTTGTGT+TGG + chr3_4:76820481-76820500 None:intergenic 50.0%
CAAGAGGATGGCTGTCTCAT+TGG - chr3_4:76820484-76820503 Msa0523480:CDS 50.0%
AGGATGGCTGTCTCATTGGA+TGG - chr3_4:76820488-76820507 Msa0523480:CDS 50.0%
! GAGGAGATGTTGACTGTGGT+AGG - chr3_4:76820585-76820604 Msa0523480:CDS 50.0%
GAGTGTTCTCCTTCCGTTGA+GGG - chr3_4:76820608-76820627 Msa0523480:CDS 50.0%
CTTAAAGGACCGTAGTCTGC+AGG - chr3_4:76821077-76821096 Msa0523480:intron 50.0%
AAGGGATACTCCAGACCATG+AGG + chr3_4:76821192-76821211 None:intergenic 50.0%
GGCAACACGGTATTAAGCGT+TGG - chr3_4:76821633-76821652 Msa0523480:five_prime_UTR 50.0%
!! CTCGTCATTGACTCGGTTCA+AGG - chr3_4:76821704-76821723 Msa0523480:five_prime_UTR 50.0%
ACCTTCAGGGCTCAACGAAT+CGG + chr3_4:76821867-76821886 None:intergenic 50.0%
GGTGATTTCGATGCACCTTC+AGG + chr3_4:76821881-76821900 None:intergenic 50.0%
! GTGTTGTTGCTCTGACAAGC+TGG + chr3_4:76821948-76821967 None:intergenic 50.0%
CATGCCAAGATCACAAAGCC+AGG - chr3_4:76822096-76822115 Msa0523480:five_prime_UTR 50.0%
GGTGTTCACCAAGTGTTTCC+TGG + chr3_4:76822117-76822136 None:intergenic 50.0%
! CACTCGCAAAGCGTCTCAAA+AGG - chr3_4:76822171-76822190 Msa0523480:intron 50.0%
! TCGCAAAGCGTCTCAAAAGG+AGG - chr3_4:76822174-76822193 Msa0523480:intron 50.0%
GAGACGAGAAAACCCGGTTT+AGG - chr3_4:76822224-76822243 Msa0523480:intron 50.0%
GCAGCACCATCTCCCATGAT+GGG + chr3_4:76818470-76818489 None:intergenic 55.0%
TGCAGCACCATCTCCCATGA+TGG + chr3_4:76818471-76818490 None:intergenic 55.0%
TGCTCGTTGTTCTCCAAGGC+AGG + chr3_4:76818680-76818699 None:intergenic 55.0%
GGGTTGCTCGTTGTTCTCCA+AGG + chr3_4:76818684-76818703 None:intergenic 55.0%
TCGTGCCGAACATCATTGCC+GGG + chr3_4:76818704-76818723 None:intergenic 55.0%
CTCGTGCCGAACATCATTGC+CGG + chr3_4:76818705-76818724 None:intergenic 55.0%
GATCCACCAGGTCCTGGATT+AGG + chr3_4:76818863-76818882 None:intergenic 55.0%
ATGGAAGATCCACCAGGTCC+TGG + chr3_4:76818869-76818888 None:intergenic 55.0%
AGCTGATAAGGGCCCTCAAG+TGG - chr3_4:76818897-76818916 Msa0523480:intron 55.0%
TGCAGAGGTGGAGGACTCAA+AGG - chr3_4:76819087-76819106 Msa0523480:intron 55.0%
GGTGGAGGACTCAAAGGAGT+TGG - chr3_4:76819093-76819112 Msa0523480:intron 55.0%
GGAGGACTCAAAGGAGTTGG+TGG - chr3_4:76819096-76819115 Msa0523480:intron 55.0%
!! GGACTCAAAGGAGTTGGTGG+CGG - chr3_4:76819099-76819118 Msa0523480:intron 55.0%
!! GACTCAAAGGAGTTGGTGGC+GGG - chr3_4:76819100-76819119 Msa0523480:intron 55.0%
GCGGTTCCGGTGTTTGAACA+AGG - chr3_4:76819252-76819271 Msa0523480:intron 55.0%
CGGTGTTTGAACAAGGGAGC+AGG - chr3_4:76819259-76819278 Msa0523480:intron 55.0%
CTCGGGTAGTGCGGTTTCAT+AGG + chr3_4:76819871-76819890 None:intergenic 55.0%
CGCACTACCCGAGATTCAAG+AGG - chr3_4:76819878-76819897 Msa0523480:CDS 55.0%
GAGACCCACGTCTGAGCTAA+AGG + chr3_4:76819936-76819955 None:intergenic 55.0%
GTGGGTCTCTTGCATCCAAC+AGG - chr3_4:76819947-76819966 Msa0523480:CDS 55.0%
! GGCAGCCATCTTTTCCCTGT+TGG + chr3_4:76819965-76819984 None:intergenic 55.0%
!! ATAGGTCAAGGTGTTGCCGG+GGG - chr3_4:76820098-76820117 Msa0523480:CDS 55.0%
! TGTCGGTTGAGAAGCACGGT+TGG + chr3_4:76820139-76820158 None:intergenic 55.0%
! GGAGTGTTCTCCTTCCGTTG+AGG - chr3_4:76820607-76820626 Msa0523480:CDS 55.0%
AGGAGAGAAAAGACGGGCCA+AGG - chr3_4:76820664-76820683 Msa0523480:intron 55.0%
AAGGGACATGCCAGACCATG+AGG + chr3_4:76821130-76821149 None:intergenic 55.0%
! ACTCGGTTCAAGGTGCCTCT+GGG - chr3_4:76821714-76821733 Msa0523480:five_prime_UTR 55.0%
CCTTCAGGGCTCAACGAATC+GGG + chr3_4:76821866-76821885 None:intergenic 55.0%
!! GGTCCTGGATTAGGCGTTGG+TGG + chr3_4:76818854-76818873 None:intergenic 60.0%
! CCAGGTCCTGGATTAGGCGT+TGG + chr3_4:76818857-76818876 None:intergenic 60.0%
CCAACGCCTAATCCAGGACC+TGG - chr3_4:76818854-76818873 Msa0523480:CDS 60.0%
ACGCCTAATCCAGGACCTGG+TGG - chr3_4:76818857-76818876 Msa0523480:CDS 60.0%
! GACTCGGTTCAAGGTGCCTC+TGG - chr3_4:76821713-76821732 Msa0523480:five_prime_UTR 60.0%
GGGCTCAACGAATCGGGATC+TGG + chr3_4:76821860-76821879 None:intergenic 60.0%
! CCCGATTCGTTGAGCCCTGA+AGG - chr3_4:76821863-76821882 Msa0523480:five_prime_UTR 60.0%
!! GAGTTGGTGGCGGGTTTGCC+TGG - chr3_4:76819109-76819128 Msa0523480:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76817830 76822681 76817830 ID=Msa0523480;Name=Msa0523480
chr3_4 mRNA 76817830 76822681 76817830 ID=Msa0523480-mRNA-1;Parent=Msa0523480;Name=Msa0523480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=1173|0.57|0.5|1|0.42|0.25|8|195|601
chr3_4 exon 76817830 76818908 76817830 ID=Msa0523480-mRNA-1:exon:22419;Parent=Msa0523480-mRNA-1
chr3_4 exon 76819747 76819970 76819747 ID=Msa0523480-mRNA-1:exon:22418;Parent=Msa0523480-mRNA-1
chr3_4 exon 76819992 76820214 76819992 ID=Msa0523480-mRNA-1:exon:22417;Parent=Msa0523480-mRNA-1
chr3_4 exon 76820257 76820450 76820257 ID=Msa0523480-mRNA-1:exon:22416;Parent=Msa0523480-mRNA-1
chr3_4 exon 76820484 76820656 76820484 ID=Msa0523480-mRNA-1:exon:22415;Parent=Msa0523480-mRNA-1
chr3_4 exon 76820741 76820788 76820741 ID=Msa0523480-mRNA-1:exon:22414;Parent=Msa0523480-mRNA-1
chr3_4 exon 76821143 76822178 76821143 ID=Msa0523480-mRNA-1:exon:22413;Parent=Msa0523480-mRNA-1
chr3_4 exon 76822485 76822681 76822485 ID=Msa0523480-mRNA-1:exon:22412;Parent=Msa0523480-mRNA-1
chr3_4 five_prime_UTR 76822485 76822681 76822485 ID=Msa0523480-mRNA-1:five_prime_utr;Parent=Msa0523480-mRNA-1
chr3_4 five_prime_UTR 76821203 76822178 76821203 ID=Msa0523480-mRNA-1:five_prime_utr;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76821143 76821202 76821143 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76820741 76820788 76820741 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76820484 76820656 76820484 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76820257 76820450 76820257 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76819992 76820214 76819992 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76819747 76819970 76819747 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 CDS 76818025 76818908 76818025 ID=Msa0523480-mRNA-1:cds;Parent=Msa0523480-mRNA-1
chr3_4 three_prime_UTR 76817830 76818024 76817830 ID=Msa0523480-mRNA-1:three_prime_utr;Parent=Msa0523480-mRNA-1
Gene Sequence

>Msa0523480

ATGACAACACAGCAGAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTAGAGGTTGTTGATCTCAGCAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGCTTGCGACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTCTGAGATCTGCATGTGAAATGCACAAATTGCCTTTAGCTCAGACGTGGGTCTCTTGCATCCAACAGGGAAAAGATGGCTGCCGGCACTCTGATGATAATTACACACACTGTATATCTCCGGTGGAGTTTTTTCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACAAACCAACCGTGCTTCTCAACCGACATTACTTCTTTAAGCAAGACAGACTATCCACTGTCTCATCATGCCAGGTTGTTTGGATTGCGAGCTGCAGTTGCCATTCGACTCCGAAGCATCTATAATTGCAATGACAGTGAAGAACAGAAAAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTGTGCCGCAGCTTGCGAGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCATCTAATGAAGTGATGGCCGTTGCTGATATTGGATTTGCTGCAGATGTAATTCAGTCGGAACTCCAACACAAGAGGATGGCTGTCTCATTGGATGGCGAAGAAAAAAAGTTCTCGGAACAAAGGCGGCAACAAGAAAGTCTTACTTTAAGAGGAGATGTTGACTGTGGTAGGGAGTGTTCTCCTTCCGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGACAATATTTCGCTGGAAGTCTAAAAGATGCTGCAAAGAATATTGGCGTCTGTACTACAACTCTGAAAAGGATCTGCAGGCAACACGGTATTAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCCTTGCAGAAACTTCAACTCGTCATTGACTCGGTTCAAGGTGCCTCTGGGTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTAATCTCAACTCTGAATCAAGTTGATAATCCAGTCTCATTAAGCATACAGCCAGATCCCGATTCGTTGAGCCCTGAAGGTGCATCGAAATCACCTTCCTCTTCATGTAGTCAGACTTCCTATTCAAGCCATTCATGTTCCAGCTTGTCAGAGCAACAACACCACACAAACAATGTTGCGTCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTCGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAAATCAAAACTCATGCCAAGATCACAAAGCCAGGAAACACTTGGTGAACACCCGAAAACCGAGTATCGCAAGTCCTTATTAAAAAACACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGACGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGTGTTATGAAGATCTTGTGCAGGAAATTGCTAGGAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTCTCAATCTTCTGAGACTAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG
Protein sequence

>Msa0523480

MTTQQSNYGRELETVCKALEVVDLSSSGHSSLQNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYTHCISPVEFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYNCNDSEEQKKMLTSLSMIIQRVCRSLRVITNKELEKNNLSSNEVMAVADIGFAADVIQSELQHKRMAVSLDGEEKKFSEQRRQQESLTLRGDVDCGRECSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSLSPEGASKSPSSSCSQTSYSSHSCSSLSEQQHHTNNVASGNKDSLVGEDSVDVVLKRIRSEAELKSLIQDNKSKLMPRSQSQETLGEHPKTEYRKSLLKNTRKASQKEDAHRVKVTFGDEKTRFRLPKNWCYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVSQSSETSTIKLCLQPSSNFIRSSLEFR*