AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0524850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524850 MtrunA17_Chr3g0137941 91.500 400 12 2 1 378 1 400 0.0 730
Msa0524850 MtrunA17_Chr1g0149111 68.796 407 91 5 2 372 5 411 0.0 520
Msa0524850 MtrunA17_Chr4g0063561 60.156 384 114 8 25 375 21 398 7.40e-153 436
Msa0524850 MtrunA17_Chr4g0000261 35.836 293 150 5 117 372 63 354 3.85e-57 190
Msa0524850 MtrunA17_Chr3g0131501 33.813 278 160 3 118 371 203 480 2.68e-45 162
Msa0524850 MtrunA17_Chr3g0131501 26.556 241 134 7 73 271 239 478 1.46e-14 75.1
Msa0524850 MtrunA17_Chr8g0385571 34.532 278 158 3 118 371 225 502 6.40e-45 161
Msa0524850 MtrunA17_Chr8g0382201 33.106 293 154 3 118 371 193 482 2.59e-43 157
Msa0524850 MtrunA17_Chr8g0347451 31.803 305 157 7 118 371 49 353 3.77e-41 148
Msa0524850 MtrunA17_Chr8g0347451 29.299 157 103 2 225 374 85 240 1.51e-17 83.2
Msa0524850 MtrunA17_Chr5g0396801 31.353 303 159 6 118 371 36 338 5.82e-41 147
Msa0524850 MtrunA17_Chr5g0396801 27.670 206 116 4 200 374 24 227 8.13e-18 84.0
Msa0524850 MtrunA17_Chr3g0115801 33.333 297 156 4 114 371 110 403 1.72e-40 147
Msa0524850 MtrunA17_Chr7g0252401 32.857 280 157 5 118 371 205 479 1.82e-40 149
Msa0524850 MtrunA17_Chr7g0240341 31.186 295 163 9 116 371 21 314 3.99e-35 131
Msa0524850 MtrunA17_Chr7g0242311 30.545 275 153 7 131 377 98 362 2.08e-32 125
Msa0524850 MtrunA17_Chr7g0242311 24.561 171 113 2 117 271 184 354 9.08e-13 68.9
Msa0524850 MtrunA17_Chr2g0296061 29.221 308 160 7 122 371 17 324 2.56e-32 124
Msa0524850 MtrunA17_Chr3g0135861 27.907 301 168 6 117 371 32 329 1.41e-31 122
Msa0524850 MtrunA17_Chr4g0067231 27.044 318 172 5 114 371 8 325 2.33e-31 121
Msa0524850 MtrunA17_Chr4g0006851 31.884 276 148 9 131 377 100 364 7.85e-31 120
Msa0524850 MtrunA17_Chr6g0488081 27.645 293 170 5 118 371 17 306 1.48e-30 119
Msa0524850 MtrunA17_Chr5g0436041 29.936 314 175 9 103 373 12 323 8.21e-27 108
Msa0524850 MtrunA17_Chr7g0269701 27.083 288 173 5 122 374 24 309 3.46e-25 104
Msa0524850 MtrunA17_Chr7g0269701 37.363 91 54 2 291 378 25 115 4.06e-11 63.5
Msa0524850 MtrunA17_Chr8g0386871 27.839 273 167 6 122 371 322 587 1.60e-23 102
Msa0524850 MtrunA17_Chr6g0463041 32.075 159 103 2 215 371 85 240 8.72e-22 93.2
Msa0524850 MtrunA17_Chr1g0201361 29.123 285 164 8 118 378 45 315 4.72e-21 92.8
Msa0524850 MtrunA17_Chr8g0372531 26.690 281 160 8 134 371 28 305 4.75e-21 92.4
Msa0524850 MtrunA17_Chr8g0372531 25.683 183 119 4 192 373 32 198 5.54e-11 63.2
Msa0524850 MtrunA17_Chr4g0040341 24.910 277 164 6 123 359 78 350 7.68e-21 92.8
Msa0524850 MtrunA17_Chr5g0431531 25.606 289 179 8 120 378 39 321 3.21e-19 87.4
Msa0524850 MtrunA17_Chr5g0423111 25.818 275 167 7 132 371 33 305 5.51e-19 87.4
Msa0524850 MtrunA17_Chr5g0423111 28.859 149 104 2 228 375 59 206 5.23e-11 63.5
Msa0524850 MtrunA17_Chr3g0088301 25.271 277 163 6 123 359 96 368 1.03e-18 87.0
Msa0524850 MtrunA17_Chr2g0328891 26.482 253 141 6 155 372 111 353 1.68e-18 85.9
Msa0524850 MtrunA17_Chr2g0328891 29.814 161 93 4 225 372 106 259 5.45e-12 66.6
Msa0524850 MtrunA17_Chr1g0195101 25.191 262 158 6 139 373 55 305 2.62e-18 84.7
Msa0524850 MtrunA17_Chr6g0488341 25.957 235 144 6 158 371 6 231 3.43e-17 80.1
Msa0524850 MtrunA17_Chr6g0455381 27.119 295 167 8 126 376 21 311 6.62e-17 80.9
Msa0524850 MtrunA17_Chr8g0352031 25.090 279 162 7 123 359 71 344 1.60e-16 80.1
Msa0524850 MtrunA17_Chr3g0135801 27.660 188 120 6 202 378 50 232 1.96e-15 76.6
Msa0524850 MtrunA17_Chr8g0393031 25.000 276 159 9 126 359 24 293 1.12e-14 74.3
Msa0524850 MtrunA17_Chr8g0393031 28.571 161 95 4 225 372 58 211 1.69e-12 67.8
Msa0524850 MtrunA17_Chr7g0219891 23.891 293 177 8 126 375 25 314 1.24e-14 73.9
Msa0524850 MtrunA17_Chr8g0383321 24.354 271 171 5 122 374 54 308 4.50e-14 72.4
Msa0524850 MtrunA17_Chr4g0004571 21.575 292 198 4 112 375 8 296 5.28e-14 72.0
Msa0524850 MtrunA17_Chr1g0200171 22.662 278 187 7 117 376 522 789 7.87e-14 73.2
Msa0524850 MtrunA17_Chr5g0411411 23.810 294 181 6 118 371 7 297 8.58e-14 71.2
Msa0524850 MtrunA17_Chr6g0463351 22.519 262 178 4 136 373 83 343 9.68e-14 72.0
Msa0524850 MtrunA17_Chr3g0133111 23.673 245 152 5 160 373 72 312 4.66e-12 66.2
Msa0524850 MtrunA17_Chr8g0366791 23.630 292 184 7 118 371 7 297 6.28e-12 65.9
Msa0524850 MtrunA17_Chr4g0028531 21.201 283 181 7 115 361 17 293 2.46e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524850 AT4G32400.1 61.290 403 118 5 1 377 1 391 6.70e-168 474
Msa0524850 AT3G20240.1 35.836 293 148 5 118 372 50 340 2.68e-56 188
Msa0524850 AT5G64970.1 32.542 295 157 4 116 371 131 422 8.83e-42 152
Msa0524850 AT5G64970.1 29.032 155 107 1 222 376 162 313 1.36e-11 66.2
Msa0524850 AT5G64970.2 32.292 288 153 4 123 371 14 298 9.50e-41 146
Msa0524850 AT5G64970.2 29.032 155 107 1 222 376 38 189 8.45e-12 65.9
Msa0524850 AT5G51050.1 34.420 276 150 6 122 371 225 495 1.99e-38 144
Msa0524850 AT5G51050.1 26.891 238 130 7 76 272 260 494 1.47e-13 72.4
Msa0524850 AT5G61810.2 33.455 275 157 5 118 371 63 332 3.42e-38 140
Msa0524850 AT4G01100.1 30.164 305 162 6 118 371 40 344 4.33e-38 140
Msa0524850 AT4G01100.1 29.114 158 104 2 225 375 76 232 3.84e-18 85.1
Msa0524850 AT4G01100.2 29.781 319 159 7 118 371 40 358 2.18e-37 139
Msa0524850 AT4G01100.2 26.901 171 105 2 225 375 76 246 4.34e-17 82.4
Msa0524850 AT5G61810.1 33.700 273 155 5 120 371 208 475 2.56e-37 140
Msa0524850 AT5G61810.1 27.374 179 101 5 119 271 298 473 2.52e-12 68.6
Msa0524850 AT5G64970.3 31.769 277 147 4 116 353 131 404 9.17e-36 135
Msa0524850 AT5G64970.3 29.032 155 107 1 222 376 162 313 1.08e-11 66.2
Msa0524850 AT4G01100.3 29.932 294 155 6 129 371 1 294 2.12e-35 132
Msa0524850 AT4G01100.3 29.114 158 104 2 225 375 26 182 2.23e-18 85.1
Msa0524850 AT1G78180.1 32.997 297 150 8 118 372 126 415 2.83e-35 134
Msa0524850 AT3G53940.1 31.399 293 163 7 116 371 69 360 4.24e-35 132
Msa0524850 AT2G37890.1 31.169 308 162 9 107 371 32 332 1.07e-34 130
Msa0524850 AT5G07320.1 32.453 265 147 7 129 369 218 474 3.62e-34 132
Msa0524850 AT5G07320.1 29.452 146 100 2 225 370 239 381 6.26e-11 64.3
Msa0524850 AT5G01500.1 31.636 275 150 7 131 377 130 394 2.88e-31 123
Msa0524850 AT5G01500.1 32.237 152 96 2 227 378 160 304 4.05e-18 85.9
Msa0524850 AT5G01500.1 26.627 169 108 2 119 271 218 386 5.94e-11 63.9
Msa0524850 AT3G55640.1 31.081 296 164 8 116 373 34 327 5.44e-31 120
Msa0524850 AT3G55640.4 31.081 296 164 8 116 373 34 327 5.44e-31 120
Msa0524850 AT3G51870.1 29.455 275 156 8 131 377 102 366 6.26e-31 121
Msa0524850 AT3G21390.1 28.618 304 157 6 122 365 21 324 7.97e-31 120
Msa0524850 AT3G21390.1 30.201 149 97 3 225 369 64 209 1.49e-16 80.5
Msa0524850 AT3G21390.2 28.618 304 157 6 122 365 43 346 1.01e-30 120
Msa0524850 AT3G21390.2 30.201 149 97 3 225 369 86 231 1.90e-16 80.1
Msa0524850 AT4G26180.1 27.483 302 174 5 118 378 19 316 1.72e-30 119
Msa0524850 AT5G48970.1 25.723 311 170 6 122 371 24 334 2.44e-28 114
Msa0524850 AT5G48970.1 28.659 164 110 3 214 373 58 218 3.60e-17 82.0
Msa0524850 AT1G14560.1 29.452 292 146 8 131 371 38 320 7.19e-28 112
Msa0524850 AT4G26180.2 26.715 277 158 5 118 353 19 291 5.68e-26 106
Msa0524850 AT4G26180.2 32.468 154 93 2 227 369 56 209 5.12e-16 78.2
Msa0524850 AT5G48970.2 26.587 252 141 4 158 365 6 257 5.38e-25 103
Msa0524850 AT5G48970.2 27.451 153 104 3 228 376 1 150 2.66e-14 72.8
Msa0524850 AT5G66380.1 30.137 292 161 8 121 371 11 300 1.59e-23 99.8
Msa0524850 AT5G66380.1 26.042 192 126 3 188 378 24 200 4.74e-12 66.6
Msa0524850 AT1G14560.2 28.832 274 135 8 131 353 38 302 2.10e-22 96.7
Msa0524850 AT1G14560.2 29.375 160 92 3 227 369 62 217 7.17e-16 78.2
Msa0524850 AT1G34065.2 28.058 278 164 7 120 378 75 335 3.00e-21 94.0
Msa0524850 AT1G14560.3 33.117 154 94 2 224 371 72 222 3.80e-21 91.7
Msa0524850 AT2G30160.1 25.517 290 180 6 120 377 42 327 3.85e-21 93.6
Msa0524850 AT1G34065.1 28.058 278 164 7 120 378 82 342 3.93e-21 93.6
Msa0524850 AT1G07030.1 25.263 285 176 6 120 373 40 318 7.13e-21 92.8
Msa0524850 AT1G25380.1 27.574 272 155 7 132 365 33 300 2.73e-20 91.7
Msa0524850 AT1G25380.2 27.574 272 155 7 132 365 33 300 2.73e-20 91.7
Msa0524850 AT4G11440.1 27.338 278 176 5 118 371 328 603 6.90e-20 92.0
Msa0524850 AT4G11440.2 27.338 278 176 5 118 371 328 603 6.90e-20 92.0
Msa0524850 AT4G28390.1 24.820 278 163 8 123 359 86 358 4.53e-18 85.1
Msa0524850 AT4G28390.2 24.820 278 163 8 123 359 86 358 4.53e-18 85.1
Msa0524850 AT3G08580.2 24.731 279 163 7 123 359 87 360 3.13e-17 82.8
Msa0524850 AT3G08580.1 24.731 279 163 7 123 359 87 360 3.13e-17 82.8
Msa0524850 AT4G39460.2 27.306 271 161 7 120 371 58 311 4.94e-17 81.6
Msa0524850 AT4G39460.1 27.306 271 161 7 120 371 58 311 4.94e-17 81.6
Msa0524850 AT4G39460.3 27.306 271 161 7 120 371 58 311 4.94e-17 81.6
Msa0524850 AT5G17400.1 27.843 255 143 10 138 359 43 289 8.82e-17 80.5
Msa0524850 AT5G17400.1 29.341 167 96 4 225 377 54 212 1.46e-12 68.2
Msa0524850 AT2G47490.1 25.704 284 169 6 132 378 29 307 1.14e-16 80.5
Msa0524850 AT5G13490.1 25.000 280 161 7 123 359 91 364 1.71e-16 80.9
Msa0524850 AT5G13490.1 29.448 163 104 3 225 378 128 288 1.17e-11 66.2
Msa0524850 AT5G13490.2 25.000 280 161 7 123 359 91 364 1.71e-16 80.9
Msa0524850 AT5G13490.2 29.448 163 104 3 225 378 128 288 1.17e-11 66.2
Msa0524850 AT5G46800.2 25.676 296 176 9 118 371 6 299 2.81e-16 79.0
Msa0524850 AT5G46800.3 25.676 296 176 9 118 371 6 299 2.81e-16 79.0
Msa0524850 AT5G46800.1 25.676 296 176 9 118 371 6 299 2.81e-16 79.0
Msa0524850 AT5G56450.1 28.049 164 112 3 220 378 74 236 2.04e-15 77.0
Msa0524850 AT3G55640.2 30.612 147 94 3 228 368 79 223 4.22e-15 75.1
Msa0524850 AT3G55640.2 26.697 221 124 6 116 300 34 252 3.30e-11 63.5
Msa0524850 AT3G55640.3 30.612 147 94 3 228 368 79 223 4.22e-15 75.1
Msa0524850 AT3G55640.3 26.697 221 124 6 116 300 34 252 3.30e-11 63.5
Msa0524850 AT3G53940.2 27.273 220 124 5 116 300 69 287 9.68e-15 74.3
Msa0524850 AT3G53940.2 30.612 147 94 3 234 374 120 264 1.31e-14 73.9
Msa0524850 AT1G79900.1 22.692 260 177 3 136 375 32 287 1.22e-13 71.2
Msa0524850 AT1G79900.1 25.397 189 117 3 112 279 101 286 1.60e-12 68.2
Msa0524850 AT5G42130.1 26.471 272 164 8 133 374 131 396 1.33e-13 72.0
Msa0524850 AT5G42130.1 31.013 158 93 5 224 377 150 295 1.93e-11 65.5
Msa0524850 AT2G35800.1 24.275 276 186 9 117 376 542 810 1.84e-13 72.4
Msa0524850 AT5G09470.1 31.944 144 88 3 235 372 99 238 7.26e-13 69.3
Msa0524850 AT4G27940.1 25.869 259 152 7 153 371 149 407 1.45e-12 68.9
Msa0524850 AT5G58970.1 26.552 290 166 12 91 372 49 299 2.09e-12 67.8
Msa0524850 AT5G26200.1 22.378 286 175 7 132 370 51 336 7.84e-12 66.2
Msa0524850 AT2G39970.1 25.328 229 146 8 164 374 106 327 8.20e-12 66.2
Msa0524850 AT1G74240.1 32.500 160 98 4 223 378 186 339 1.02e-11 66.2
Msa0524850 AT1G74240.2 32.500 160 98 4 223 378 138 291 1.12e-11 65.5
Msa0524850 AT4G03115.2 27.673 159 103 3 222 378 70 218 2.73e-11 63.2
Msa0524850 AT4G03115.4 27.673 159 103 3 222 378 70 218 3.92e-11 62.8

Find 127 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCACTAAAAGGAAATTT+AGG 0.125546 3_4:+78398926 None:intergenic
GATTCTAATTCCCCTGAAAA+TGG 0.247936 3_4:-78398956 Msa0524850:CDS
AAGTAATTGGTAGCCGAATA+TGG 0.290183 3_4:+78392143 None:intergenic
TTAACGTATAATTCACTAAA+AGG 0.290618 3_4:+78398917 None:intergenic
TATTGGAGTTATTCCATATT+CGG 0.294716 3_4:-78392156 Msa0524850:CDS
CACAGCAACACTGCACAAAA+AGG 0.295836 3_4:-78399378 Msa0524850:five_prime_UTR
GGCCTGACACCTAGTCTTAT+TGG 0.296680 3_4:-78392173 Msa0524850:CDS
TGGATGGAAGGGTTTGTTTA+GGG 0.298083 3_4:-78398624 Msa0524850:CDS
ATTCACTAAAAGGAAATTTA+GGG 0.305139 3_4:+78398927 None:intergenic
TGGCACCTTTGGAGACTATT+AGG 0.317047 3_4:-78398715 Msa0524850:CDS
GGGAGTTTGGACTGCTCTCC+AGG 0.329744 3_4:+78392567 None:intergenic
ATGGATGGAAGGGTTTGTTT+AGG 0.338034 3_4:-78398625 Msa0524850:CDS
TGATGCAGGAACTGGGAGTT+TGG 0.340339 3_4:+78392554 None:intergenic
TAAGGAATCCTTCTATTAGA+AGG 0.342750 3_4:-78398781 Msa0524850:CDS
TAGAACCACTGTGGCACCTT+TGG 0.351090 3_4:-78398726 Msa0524850:CDS
GAAATCTTGTTAATGTCATT+CGG 0.353717 3_4:-78398601 Msa0524850:CDS
GCAATCAATGATGCAGGAAC+TGG 0.354288 3_4:+78392546 None:intergenic
TTTGAGCCTAATGGTGTTAC+GGG 0.368589 3_4:-78398872 Msa0524850:CDS
AGTGTTGGTCAAGTGGGAAT+AGG 0.372936 3_4:-78399007 Msa0524850:CDS
AAATCTTGTTAATGTCATTC+GGG 0.378614 3_4:-78398600 Msa0524850:CDS
CTCTGGAAATTTGAGCCTAA+TGG 0.383482 3_4:-78398881 Msa0524850:CDS
GTGTTGGTCAAGTGGGAATA+GGG 0.395032 3_4:-78399006 Msa0524850:CDS
GTTCCTGCATCATTGATTGC+AGG 0.398153 3_4:-78392543 Msa0524850:CDS
AGATAACGACGAGGAGGAAT+AGG 0.402308 3_4:-78391796 Msa0524850:exon
GGTCAAGTGGGAATAGGGTT+TGG 0.403207 3_4:-78399001 Msa0524850:CDS
GACAGTTTGTTTCAAGTTTG+AGG 0.418932 3_4:+78399207 None:intergenic
GACTATTAGGACTCATTTGA+TGG 0.419164 3_4:-78398702 Msa0524850:CDS
CTACACAACCTTCTAATAGA+AGG 0.424911 3_4:+78398773 None:intergenic
GAATCAGAAGGGTTTGGTTG+TGG 0.427235 3_4:+78398974 None:intergenic
GAATTAGAATCAGAAGGGTT+TGG 0.431685 3_4:+78398968 None:intergenic
CAGGGTCTATATAGAGGGCT+TGG 0.438449 3_4:-78391894 Msa0524850:CDS
ATTTGAGCCTAATGGTGTTA+CGG 0.440900 3_4:-78398873 Msa0524850:CDS
TGTTTATTTACGTTGCTGCC+AGG 0.444441 3_4:-78391636 Msa0524850:three_prime_UTR
CCTAATGGTGTTACGGGCAA+GGG 0.453681 3_4:-78398866 Msa0524850:CDS
GGACTGCTCTCCAGGCTTTG+CGG 0.454230 3_4:+78392575 None:intergenic
TGGAGCTCTCAGTGGAAGAC+AGG 0.455160 3_4:-78391970 Msa0524850:CDS
CAGCCGCTGAACCAATCAAA+AGG 0.456453 3_4:+78392051 None:intergenic
ACAGTTTGTTTCAAGTTTGA+GGG 0.457774 3_4:+78399208 None:intergenic
GCAGTTCCACAACTTGGCTT+CGG 0.459919 3_4:+78391756 None:intergenic
GGTGGTTTGTTTGCTAGTGT+TGG 0.463456 3_4:-78399022 Msa0524850:CDS
GCTCTCCAGGCTTTGCGGAT+AGG 0.463551 3_4:+78392580 None:intergenic
CTCCAATAAGACTAGGTGTC+AGG 0.465823 3_4:+78392171 None:intergenic
TCAACTTCATAAAATATGAT+TGG 0.469031 3_4:+78391525 None:intergenic
TTGATTGCAGGTGCCTGTGC+TGG 0.469256 3_4:-78392531 Msa0524850:CDS
ATTAATTGAATAATGATTCG+TGG 0.470394 3_4:+78399276 None:intergenic
ACTAGAACAAGAAGGGATCC+AGG 0.475653 3_4:-78391913 Msa0524850:CDS
CTCTTTGATGACAAAAGAGA+TGG 0.481584 3_4:-78399094 Msa0524850:CDS
TTGTGTAGTGGAGCAATTGC+TGG 0.481763 3_4:-78398758 Msa0524850:CDS
GGGATCCAGGGTCTATATAG+AGG 0.481983 3_4:-78391900 Msa0524850:CDS
CAGGATATTATGAAAACTGA+TGG 0.484050 3_4:-78398644 Msa0524850:CDS
CTTGTTCTAGTATGCTCAGA+AGG 0.484061 3_4:+78391925 None:intergenic
GCCTAATGGTGTTACGGGCA+AGG 0.486297 3_4:-78398867 Msa0524850:CDS
AGTGTCGTAGGCAAAGTAAT+TGG 0.491022 3_4:+78392130 None:intergenic
AGGCCTCTGTAAAGTTCTGC+AGG 0.491988 3_4:+78392191 None:intergenic
CATGAGGATTACTATTATCC+TGG 0.492331 3_4:-78399043 Msa0524850:CDS
AAGAACCTATCCGCAAAGCC+TGG 0.493720 3_4:-78392585 Msa0524850:CDS
GGAAGGTGAACAAGTTGTTA+AGG 0.501044 3_4:-78398843 Msa0524850:CDS
TATGCAGCAGTTCCACAACT+TGG 0.503611 3_4:+78391750 None:intergenic
CCCCTCTGAGAATGGAATGT+TGG 0.505283 3_4:-78391664 Msa0524850:three_prime_UTR
CCCTTGCCCGTAACACCATT+AGG 0.507798 3_4:+78398866 None:intergenic
TATTCATTCTAACACTAAGA+TGG 0.508904 3_4:+78399242 None:intergenic
ACAGCTATTTGCTTATGATA+CGG 0.513297 3_4:-78392613 Msa0524850:intron
TGCTTGCGAGCCACCTCAAG+TGG 0.518650 3_4:+78392002 None:intergenic
ATTCTAACACTAAGATGGAA+TGG 0.524931 3_4:+78399247 None:intergenic
GGATGGAAGGGTTTGTTTAG+GGG 0.528599 3_4:-78398623 Msa0524850:CDS
ATGAAAACTGATGGATGGAA+GGG 0.528727 3_4:-78398635 Msa0524850:CDS
TGTCACTCTGTGCTAAGAAA+AGG 0.530085 3_4:-78399188 Msa0524850:five_prime_UTR
TTAAGCTCAAGATTAAGATA+AGG 0.531801 3_4:-78398799 Msa0524850:CDS
GTTCCACAACTTGGCTTCGG+TGG 0.531988 3_4:+78391759 None:intergenic
TATGAAAACTGATGGATGGA+AGG 0.533911 3_4:-78398636 Msa0524850:CDS
TCAGGGGAATTAGAATCAGA+AGG 0.536789 3_4:+78398962 None:intergenic
CATGAAAATAATTAAAGAAG+AGG 0.547955 3_4:-78392216 Msa0524850:CDS
TGCGCCTAGCAAGGCTATTG+AGG 0.550247 3_4:-78398576 Msa0524850:intron
GTTTGCTAGTGTTGGTCAAG+TGG 0.552428 3_4:-78399014 Msa0524850:CDS
CAATCAATGATGCAGGAACT+GGG 0.552440 3_4:+78392547 None:intergenic
CCAAGACACAATGAAAAGCC+TGG 0.554074 3_4:+78391618 None:intergenic
TTTGCTAGTGTTGGTCAAGT+GGG 0.555292 3_4:-78399013 Msa0524850:CDS
ACCAACATTCCATTCTCAGA+GGG 0.556979 3_4:+78391663 None:intergenic
CATTCGGGTTGCGCCTAGCA+AGG 0.557121 3_4:-78398585 Msa0524850:CDS
TTAAGTATATTCAATCACTC+TGG 0.561876 3_4:-78398898 Msa0524850:CDS
ATGAAAGAGATTCCAGCGGC+TGG 0.561878 3_4:+78391849 None:intergenic
GCTCGCAAGCAAATGCAAGT+TGG 0.562624 3_4:-78391990 Msa0524850:CDS
CATTTGATGGTGGGAAGTAG+TGG 0.562649 3_4:-78398689 Msa0524850:CDS
ATTAGGACTCATTTGATGGT+GGG 0.563542 3_4:-78398698 Msa0524850:CDS
CAGGGGAATTAGAATCAGAA+GGG 0.563815 3_4:+78398963 None:intergenic
TTTCCACCGAAGCCAAGTTG+TGG 0.563835 3_4:-78391762 Msa0524850:three_prime_UTR
ATTACCTCAATAGCCTTGCT+AGG 0.568427 3_4:+78398572 None:intergenic
AGTTGAACTCACTCCAGCAC+AGG 0.568725 3_4:+78392518 None:intergenic
AGCCGCTGAACCAATCAAAA+GGG 0.571340 3_4:+78392052 None:intergenic
GCACCTGCAATCAATGATGC+AGG 0.573834 3_4:+78392540 None:intergenic
TATTAGGACTCATTTGATGG+TGG 0.584361 3_4:-78398699 Msa0524850:CDS
AGAAGGTATGATGGATTCAG+TGG 0.585437 3_4:-78399401 None:intergenic
TCTATTAGAAGGTTGTGTAG+TGG 0.586868 3_4:-78398770 Msa0524850:CDS
ATGAAGTTAGTGCCAGCCGC+TGG 0.587015 3_4:-78391861 Msa0524850:CDS
TCTTTGATGACAAAAGAGAT+GGG 0.588905 3_4:-78399093 Msa0524850:CDS
CTAATGGTGTTACGGGCAAG+GGG 0.590038 3_4:-78398865 Msa0524850:CDS
CTGAGCATACTAGAACAAGA+AGG 0.593797 3_4:-78391921 Msa0524850:CDS
ATGAAAATAATTAAAGAAGA+GGG 0.593954 3_4:-78392215 Msa0524850:CDS
TTGTTCTAGTATGCTCAGAA+GGG 0.596267 3_4:+78391926 None:intergenic
CAAGCCCTCTATATAGACCC+TGG 0.597259 3_4:+78391895 None:intergenic
TGTGCGGAGGAGTGTGACTT+AGG 0.597517 3_4:+78399346 None:intergenic
TTCAAATTTAGGGTCTCATG+AGG 0.600906 3_4:-78399059 Msa0524850:CDS
ATATTATGAAAACTGATGGA+TGG 0.609112 3_4:-78398640 Msa0524850:CDS
GAGGATTACTATTATCCTGG+TGG 0.610245 3_4:-78399040 Msa0524850:CDS
TGAGCATACTAGAACAAGAA+GGG 0.614672 3_4:-78391920 Msa0524850:CDS
TGCTTTCCGCAGAGTGTCGT+AGG 0.615525 3_4:+78392118 None:intergenic
GGCACTAACTTCATGCAACT+AGG 0.618304 3_4:+78391870 None:intergenic
CTAGAACAAGAAGGGATCCA+GGG 0.626781 3_4:-78391912 Msa0524850:CDS
TTGCAGAGAGGTGTTTACAA+TGG 0.627413 3_4:-78392254 Msa0524850:intron
GGATCCAGGGTCTATATAGA+GGG 0.632956 3_4:-78391899 Msa0524850:CDS
ACTTTGCCTACGACACTCTG+CGG 0.638131 3_4:-78392124 Msa0524850:CDS
GGAATAACTCCAATAAGACT+AGG 0.640014 3_4:+78392164 None:intergenic
TGAGTCCTAATAGTCTCCAA+AGG 0.641578 3_4:+78398710 None:intergenic
ATGAATGCTCTTCGTGTGTG+CGG 0.641596 3_4:+78399330 None:intergenic
ACACTAGCAAACAAACCACC+AGG 0.654663 3_4:+78399025 None:intergenic
AACCAACATTCCATTCTCAG+AGG 0.668047 3_4:+78391662 None:intergenic
ATTGATAGATAACGACGAGG+AGG 0.678212 3_4:-78391802 Msa0524850:CDS
ATGCAAGTTGGAGCTCTCAG+TGG 0.678622 3_4:-78391978 Msa0524850:CDS
AATGCTCTTCGTGTGTGCGG+AGG 0.685481 3_4:+78399333 None:intergenic
TAATGGTGTTACGGGCAAGG+GGG 0.685871 3_4:-78398864 Msa0524850:CDS
AGTCTCCAAAGGTGCCACAG+TGG 0.705525 3_4:+78398721 None:intergenic
AATATCCTGGAAAACATCAG+CGG 0.708839 3_4:+78398658 None:intergenic
CCAACATTCCATTCTCAGAG+GGG 0.722848 3_4:+78391664 None:intergenic
GGTCCTGCAGAACTTTACAG+AGG 0.733792 3_4:-78392194 Msa0524850:CDS
TGCAATTTCTAGAACCACTG+TGG 0.742671 3_4:-78398735 Msa0524850:CDS
ACACATGAAAGAGATTCCAG+CGG 0.747929 3_4:+78391845 None:intergenic
GATATTGATAGATAACGACG+AGG 0.784110 3_4:-78391805 Msa0524850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTAGAAAATATGATATTA+TGG + chr3_4:78392483-78392502 None:intergenic 15.0%
!!! TTTTTATTTTAGTCAATAAG+TGG + chr3_4:78393057-78393076 None:intergenic 15.0%
!!! ATTTTTAAAGTTTAAGAAGA+TGG + chr3_4:78395376-78395395 None:intergenic 15.0%
!!! TTTTTATTTTAGTCAATAAG+TGG + chr3_4:78393057-78393076 None:intergenic 15.0%
!!! TATTTGTTAATTATTGCTTT+TGG + chr3_4:78397350-78397369 None:intergenic 15.0%
!!! TTTTTTTTTCAACATTGAAA+GGG + chr3_4:78397417-78397436 None:intergenic 15.0%
!!! TTTTTTTTTTCAACATTGAA+AGG + chr3_4:78397418-78397437 None:intergenic 15.0%
!!! TTAATGTTTTAACATCATAT+TGG - chr3_4:78398533-78398552 Msa0524850:intron 15.0%
!! ATGAAAATAATTAAAGAAGA+GGG - chr3_4:78398631-78398650 Msa0524850:CDS 15.0%
!! ATTAATTGAATAATGATTCG+TGG + chr3_4:78391573-78391592 None:intergenic 20.0%
!!! TTTTTCTCTGTTTCAAATTT+AGG - chr3_4:78391776-78391795 Msa0524850:three_prime_UTR 20.0%
!!! TTTTCTCTGTTTCAAATTTA+GGG - chr3_4:78391777-78391796 Msa0524850:three_prime_UTR 20.0%
!! ATTCACTAAAAGGAAATTTA+GGG + chr3_4:78391922-78391941 None:intergenic 20.0%
!! AATTCACTAAAAGGAAATTT+AGG + chr3_4:78391923-78391942 None:intergenic 20.0%
!! TTAACGTATAATTCACTAAA+AGG + chr3_4:78391932-78391951 None:intergenic 20.0%
!! TTTGATTAGGGATTATTAAT+TGG - chr3_4:78392448-78392467 Msa0524850:intron 20.0%
!! TTGATTAGGGATTATTAATT+GGG - chr3_4:78392449-78392468 Msa0524850:intron 20.0%
!!! TCATATTTTCTAAGATTTCA+AGG - chr3_4:78392488-78392507 Msa0524850:intron 20.0%
!! TTATATCCCAAATATTCTTA+TGG - chr3_4:78392527-78392546 Msa0524850:intron 20.0%
!! CTAAAACCATAAGAATATTT+GGG + chr3_4:78392536-78392555 None:intergenic 20.0%
!!! TCTAAAACCATAAGAATATT+TGG + chr3_4:78392537-78392556 None:intergenic 20.0%
!!! GTTTTAGAACTTTTTAGAAT+TGG - chr3_4:78392549-78392568 Msa0524850:CDS 20.0%
!! TGAAAAATAATATGATAGAC+AGG - chr3_4:78392874-78392893 Msa0524850:intron 20.0%
!! GAAAAATAATATGATAGACA+GGG - chr3_4:78392875-78392894 Msa0524850:intron 20.0%
!! AGAATATTGAGATATGTTAA+AGG + chr3_4:78393671-78393690 None:intergenic 20.0%
!!! TTTCCTTTGCATATTTTTTT+TGG - chr3_4:78393921-78393940 Msa0524850:intron 20.0%
!! GATACAAAAAAACAAAACAT+GGG + chr3_4:78394590-78394609 None:intergenic 20.0%
!! TGATACAAAAAAACAAAACA+TGG + chr3_4:78394591-78394610 None:intergenic 20.0%
!! CTATGAAAAGAATAAAGTAT+AGG - chr3_4:78395457-78395476 Msa0524850:intron 20.0%
!! TTGGTCAATTATTAGAAAAA+GGG + chr3_4:78395869-78395888 None:intergenic 20.0%
!! TAGAATTGTTGAAAAAATTC+TGG + chr3_4:78396549-78396568 None:intergenic 20.0%
!! TGAAAAATAATATGATAGAC+AGG - chr3_4:78392874-78392893 Msa0524850:intron 20.0%
!! GAAAAATAATATGATAGACA+GGG - chr3_4:78392875-78392894 Msa0524850:intron 20.0%
!!! GTTTTATGATTGTCTATTAA+TGG - chr3_4:78397561-78397580 Msa0524850:intron 20.0%
!!! TCTATTAATGGATTCATTTA+CGG - chr3_4:78397573-78397592 Msa0524850:intron 20.0%
!! AGTAATTATATATACATACC+TGG + chr3_4:78398398-78398417 None:intergenic 20.0%
!! AAGCAAAATTATGTATATAC+AGG + chr3_4:78398506-78398525 None:intergenic 20.0%
!! GATGTTAAAACATTAATATG+AGG + chr3_4:78398529-78398548 None:intergenic 20.0%
!! CATGAAAATAATTAAAGAAG+AGG - chr3_4:78398630-78398649 Msa0524850:CDS 20.0%
!!! TCTCTTGTTTGAAAATTTTT+CGG + chr3_4:78398756-78398775 None:intergenic 20.0%
!!! CATACTTTTTTGATACATTT+CGG - chr3_4:78399115-78399134 Msa0524850:CDS 20.0%
!! TCAACTTCATAAAATATGAT+TGG + chr3_4:78399324-78399343 None:intergenic 20.0%
! TATTCATTCTAACACTAAGA+TGG + chr3_4:78391607-78391626 None:intergenic 25.0%
!!! ACAATTCAAAACCTGTTTTT+TGG - chr3_4:78391705-78391724 Msa0524850:three_prime_UTR 25.0%
! TTAAGTATATTCAATCACTC+TGG - chr3_4:78391948-78391967 Msa0524850:CDS 25.0%
! GTTAAGGTGAAGAATAAAAA+TGG - chr3_4:78392019-78392038 Msa0524850:CDS 25.0%
! TTAAGCTCAAGATTAAGATA+AGG - chr3_4:78392047-78392066 Msa0524850:CDS 25.0%
! ATATTATGAAAACTGATGGA+TGG - chr3_4:78392206-78392225 Msa0524850:CDS 25.0%
! GAAATCTTGTTAATGTCATT+CGG - chr3_4:78392245-78392264 Msa0524850:CDS 25.0%
! AAATCTTGTTAATGTCATTC+GGG - chr3_4:78392246-78392265 Msa0524850:CDS 25.0%
!!! TACTAACTGCAATTTTGATT+AGG - chr3_4:78392435-78392454 Msa0524850:intron 25.0%
!!! ACTAACTGCAATTTTGATTA+GGG - chr3_4:78392436-78392455 Msa0524850:intron 25.0%
!!! ACTTTTTAGAATTGGCAAAA+TGG - chr3_4:78392557-78392576 Msa0524850:CDS 25.0%
!! ATAGTTTTTGTATTAGAGCT+AGG - chr3_4:78392602-78392621 Msa0524850:CDS 25.0%
! TAACCACAAAACTTGATTTA+CGG - chr3_4:78393433-78393452 Msa0524850:intron 25.0%
! AATATTGAGAAAATTCCAGA+TGG + chr3_4:78393903-78393922 None:intergenic 25.0%
! AATGATCACTTAATGAGTAT+AGG + chr3_4:78394175-78394194 None:intergenic 25.0%
! TATTGAAAAAAGCCCTTTAT+GGG + chr3_4:78394234-78394253 None:intergenic 25.0%
! TTTACAAGAAGAGATATATG+TGG + chr3_4:78394305-78394324 None:intergenic 25.0%
! TGGCTCAATCAATAAATATA+AGG + chr3_4:78394494-78394513 None:intergenic 25.0%
! AAAAGTCATTGGAGTTAAAT+GGG + chr3_4:78394542-78394561 None:intergenic 25.0%
!! TTTAAAGTTTAAGAAGATGG+TGG + chr3_4:78395373-78395392 None:intergenic 25.0%
! GTTGGTCAATTATTAGAAAA+AGG + chr3_4:78395870-78395889 None:intergenic 25.0%
! CAAAACAGCAAAAGAAATAT+GGG + chr3_4:78396750-78396769 None:intergenic 25.0%
! TCAAAACAGCAAAAGAAATA+TGG + chr3_4:78396751-78396770 None:intergenic 25.0%
!!! ATATTTCTTTTGCTGTTTTG+AGG - chr3_4:78396750-78396769 Msa0524850:intron 25.0%
!!! TATTTCTTTTGCTGTTTTGA+GGG - chr3_4:78396751-78396770 Msa0524850:intron 25.0%
! ATACCAAATAACCAACAAAT+TGG + chr3_4:78397075-78397094 None:intergenic 25.0%
! TCTTTCTTCATAAAAGAACT+TGG + chr3_4:78397445-78397464 None:intergenic 25.0%
! TAAAACAATATACCAGAAAC+AGG + chr3_4:78397547-78397566 None:intergenic 25.0%
! TATTGATGAAAACAACTGAA+GGG + chr3_4:78397643-78397662 None:intergenic 25.0%
! ATATTGATGAAAACAACTGA+AGG + chr3_4:78397644-78397663 None:intergenic 25.0%
!! TTTAACTCTTTAGTGGTTTT+AGG - chr3_4:78397916-78397935 Msa0524850:intron 25.0%
!!! TTAACTCTTTAGTGGTTTTA+GGG - chr3_4:78397917-78397936 Msa0524850:intron 25.0%
!!! GTTCTTGTTTCTTGTTTTTT+AGG - chr3_4:78397992-78398011 Msa0524850:intron 25.0%
!!! TTGTTTCTTGTTTTTTAGGT+GGG - chr3_4:78397996-78398015 Msa0524850:intron 25.0%
!! ATAAATAACGCTTTTCTCAT+TGG + chr3_4:78398136-78398155 None:intergenic 25.0%
! TAAAGTCTTACAAGTTATGT+CGG + chr3_4:78398430-78398449 None:intergenic 25.0%
!! ACATAACTTGTAAGACTTTA+TGG - chr3_4:78398430-78398449 Msa0524850:intron 25.0%
! TATTGGAGTTATTCCATATT+CGG - chr3_4:78398690-78398709 Msa0524850:CDS 25.0%
!! ATTTTCAAACAAGAGAAGAT+CGG - chr3_4:78398760-78398779 Msa0524850:CDS 25.0%
!!! CATTTCGGTTAACTTATTTT+TGG - chr3_4:78399130-78399149 Msa0524850:exon 25.0%
!!! TTTGGTTTCTCTTATTTTAC+TGG - chr3_4:78399148-78399167 Msa0524850:five_prime_UTR 25.0%
! CATAATCTAGAGAGAAAAAA+TGG + chr3_4:78399368-78399387 None:intergenic 25.0%
ATTCTAACACTAAGATGGAA+TGG + chr3_4:78391602-78391621 None:intergenic 30.0%
!! ACAGTTTGTTTCAAGTTTGA+GGG + chr3_4:78391641-78391660 None:intergenic 30.0%
!!! AAAACCTGTTTTTTGGTTCA+TGG - chr3_4:78391712-78391731 Msa0524850:three_prime_UTR 30.0%
!!! AAACCTGTTTTTTGGTTCAT+GGG - chr3_4:78391713-78391732 Msa0524850:three_prime_UTR 30.0%
! TCTTTGATGACAAAAGAGAT+GGG - chr3_4:78391753-78391772 Msa0524850:three_prime_UTR 30.0%
AAGGTGAAGAATAAAAATGG+TGG - chr3_4:78392022-78392041 Msa0524850:CDS 30.0%
AGGTGAAGAATAAAAATGGT+GGG - chr3_4:78392023-78392042 Msa0524850:CDS 30.0%
TAAGGAATCCTTCTATTAGA+AGG - chr3_4:78392065-78392084 Msa0524850:CDS 30.0%
! CATCAGTTTTCATAATATCC+TGG + chr3_4:78392204-78392223 None:intergenic 30.0%
CAGGATATTATGAAAACTGA+TGG - chr3_4:78392202-78392221 Msa0524850:CDS 30.0%
GTATCAAGTGCTATCATTAA+GGG + chr3_4:78392333-78392352 None:intergenic 30.0%
AGTATCAAGTGCTATCATTA+AGG + chr3_4:78392334-78392353 None:intergenic 30.0%
TAATGATAGCACTTGATACT+TGG - chr3_4:78392334-78392353 Msa0524850:intron 30.0%
TAAAGATCTGTCTACCATAT+CGG - chr3_4:78392400-78392419 Msa0524850:intron 30.0%
TATATCATAGACTTCCGATA+TGG + chr3_4:78392417-78392436 None:intergenic 30.0%
TTAGGGATTATTAATTGGGT+AGG - chr3_4:78392453-78392472 Msa0524850:intron 30.0%
ATAGTATGACAATTTGTCCA+TGG + chr3_4:78392736-78392755 None:intergenic 30.0%
!! AAGCAAATAGAGCTTTAGAT+TGG - chr3_4:78392762-78392781 Msa0524850:intron 30.0%
AGGTATTAACTACTAACCAA+CGG - chr3_4:78392807-78392826 Msa0524850:intron 30.0%
!! GGAGTGTTAATTATTGCTTT+TGG + chr3_4:78393126-78393145 None:intergenic 30.0%
!!! GAGTTTTTAAGGCAAAAAGT+TGG + chr3_4:78393173-78393192 None:intergenic 30.0%
! AGAAGTTTTTATTGACAACC+AGG + chr3_4:78393369-78393388 None:intergenic 30.0%
TCAGGATATTGTTTCAGTAT+AGG + chr3_4:78393545-78393564 None:intergenic 30.0%
ATTGAGATATGTTAAAGGCA+CGG + chr3_4:78393666-78393685 None:intergenic 30.0%
CTTACAGCAAATAAAATGTC+TGG - chr3_4:78393746-78393765 Msa0524850:intron 30.0%
CTGCCAAAAAAAATATGCAA+AGG + chr3_4:78393927-78393946 None:intergenic 30.0%
!! GGTCTTATGACATATTTTCT+TGG + chr3_4:78393986-78394005 None:intergenic 30.0%
!!! TGCTTGTTTTAACCCATAAA+GGG - chr3_4:78394219-78394238 Msa0524850:intron 30.0%
CTATTGAAAAAAGCCCTTTA+TGG + chr3_4:78394235-78394254 None:intergenic 30.0%
!!! GTCAAATCAGCTTTTTTGAA+TGG + chr3_4:78394331-78394350 None:intergenic 30.0%
CAGATTAGACACAATTAGAT+TGG + chr3_4:78394401-78394420 None:intergenic 30.0%
CAATCTAATTGTGTCTAATC+TGG - chr3_4:78394399-78394418 Msa0524850:intron 30.0%
!! AAAGGGTATGCACAAATTTT+TGG + chr3_4:78394457-78394476 None:intergenic 30.0%
GAAAAGTCATTGGAGTTAAA+TGG + chr3_4:78394543-78394562 None:intergenic 30.0%
AAAATGGAAAAATGCAATGG+AGG + chr3_4:78394626-78394645 None:intergenic 30.0%
! TCCATTGCATTTTTCCATTT+TGG - chr3_4:78394625-78394644 Msa0524850:intron 30.0%
TCCAAAATGGAAAAATGCAA+TGG + chr3_4:78394629-78394648 None:intergenic 30.0%
TAATTCATTCAGACACAACT+CGG - chr3_4:78394753-78394772 Msa0524850:intron 30.0%
TCTAGTTATAGTCAGTGTTT+CGG - chr3_4:78394879-78394898 Msa0524850:intron 30.0%
! ACAACCAAACACTTTAAGAA+AGG - chr3_4:78395020-78395039 Msa0524850:intron 30.0%
! CTAACCTTTCTTAAAGTGTT+TGG + chr3_4:78395027-78395046 None:intergenic 30.0%
! ACTTTAAGAAAGGTTAGTGA+AGG - chr3_4:78395030-78395049 Msa0524850:intron 30.0%
!!! ATAAAACTCCTTTTGAAGCA+TGG + chr3_4:78395068-78395087 None:intergenic 30.0%
!! AGTTTTATCTTGTAAAGCCT+TGG - chr3_4:78395080-78395099 Msa0524850:intron 30.0%
! GGAATTGCCTAAACAATTTT+GGG + chr3_4:78395151-78395170 None:intergenic 30.0%
! AGGAATTGCCTAAACAATTT+TGG + chr3_4:78395152-78395171 None:intergenic 30.0%
! AAATAGATCAGTAATGGAGA+TGG + chr3_4:78395196-78395215 None:intergenic 30.0%
AAGGAGAAATAGATCAGTAA+TGG + chr3_4:78395202-78395221 None:intergenic 30.0%
AACAAAATGGAGTTAGTGAA+AGG + chr3_4:78395221-78395240 None:intergenic 30.0%
! TTCACTAACTCCATTTTGTT+CGG - chr3_4:78395221-78395240 Msa0524850:intron 30.0%
!!! AATTTATTTTGCGAAGAAGC+TGG + chr3_4:78395279-78395298 None:intergenic 30.0%
!! CAATTTCTAAGGTCTGATAA+TGG + chr3_4:78395327-78395346 None:intergenic 30.0%
AGACCTTAGAAATTGAATCT+TGG - chr3_4:78395332-78395351 Msa0524850:intron 30.0%
!! AATGAGTTGAAGCTTTTTAG+TGG - chr3_4:78395527-78395546 Msa0524850:intron 30.0%
!!! TTCTGTTTTGTTTACCAAAC+TGG - chr3_4:78395577-78395596 Msa0524850:intron 30.0%
!! AGCAGATTTTGATCAATATC+AGG - chr3_4:78395894-78395913 Msa0524850:intron 30.0%
TATATTCCTGCAAAAGGAAA+AGG + chr3_4:78395978-78395997 None:intergenic 30.0%
CATATCTCAAAAGTCAGAAT+TGG + chr3_4:78396011-78396030 None:intergenic 30.0%
!! TGGCTTTAAATCTTTGAAGA+TGG - chr3_4:78396034-78396053 Msa0524850:intron 30.0%
!!! TGGTTTTATCATATGTCATG+TGG - chr3_4:78396054-78396073 Msa0524850:intron 30.0%
TGAAGAAGATCAAATGTTTG+TGG + chr3_4:78396141-78396160 None:intergenic 30.0%
! TTTTACCTCTATCTTTGCTT+TGG - chr3_4:78396333-78396352 Msa0524850:intron 30.0%
TTTCTATTGCAAACAAGGTT+AGG + chr3_4:78396598-78396617 None:intergenic 30.0%
ATTGCTTTCTATTGCAAACA+AGG + chr3_4:78396603-78396622 None:intergenic 30.0%
AGAAATATGGGACTATTTGA+AGG + chr3_4:78396738-78396757 None:intergenic 30.0%
! GAAAACATTTTGTGAAACAC+AGG - chr3_4:78396787-78396806 Msa0524850:intron 30.0%
AACTTCATAATCCTCTTCAA+CGG - chr3_4:78396901-78396920 Msa0524850:intron 30.0%
AATGAAACAGAAACTCAAGT+CGG + chr3_4:78397379-78397398 None:intergenic 30.0%
! TGAGTTTCTGTTTCATTTTC+TGG - chr3_4:78397382-78397401 Msa0524850:intron 30.0%
!!! TGTTTTGCATATTTTGACCA+TGG - chr3_4:78397781-78397800 Msa0524850:intron 30.0%
ATAAAACCAACTATCTGTCA+TGG + chr3_4:78397828-78397847 None:intergenic 30.0%
ACCACTAAAGAGTTAAAAGA+GGG + chr3_4:78397913-78397932 None:intergenic 30.0%
AACCACTAAAGAGTTAAAAG+AGG + chr3_4:78397914-78397933 None:intergenic 30.0%
!!! CTTGTTTCTTGTTTTTTAGG+TGG - chr3_4:78397995-78398014 Msa0524850:intron 30.0%
!!! TGTTTCTTGTTTTTTAGGTG+GGG - chr3_4:78397997-78398016 Msa0524850:intron 30.0%
! AAAGCGTTATTTATCTACTC+TGG - chr3_4:78398142-78398161 Msa0524850:intron 30.0%
AAGCAAATAGCTGTAGAAAT+AGG + chr3_4:78398227-78398246 None:intergenic 30.0%
ACAGCTATTTGCTTATGATA+CGG - chr3_4:78398233-78398252 Msa0524850:intron 30.0%
!!! AACTTTGAAACCCTTTTGAT+TGG - chr3_4:78398784-78398803 Msa0524850:CDS 30.0%
! CTTTGTAATCCTGTTCTTTT+TGG - chr3_4:78399277-78399296 Msa0524850:five_prime_UTR 30.0%
AGTCAATTTCCAAAAAGAAC+AGG + chr3_4:78399289-78399308 None:intergenic 30.0%
!! AAGTTGATTTTTGTTGAGCA+AGG - chr3_4:78399337-78399356 Msa0524850:five_prime_UTR 30.0%
!! GACAGTTTGTTTCAAGTTTG+AGG + chr3_4:78391642-78391661 None:intergenic 35.0%
! CTCTTTTGTCATCAAAGAGT+TGG + chr3_4:78391751-78391770 None:intergenic 35.0%
! CTCTTTGATGACAAAAGAGA+TGG - chr3_4:78391752-78391771 Msa0524850:three_prime_UTR 35.0%
! TTCAAATTTAGGGTCTCATG+AGG - chr3_4:78391787-78391806 Msa0524850:exon 35.0%
CATGAGGATTACTATTATCC+TGG - chr3_4:78391803-78391822 Msa0524850:CDS 35.0%
GAATTAGAATCAGAAGGGTT+TGG + chr3_4:78391881-78391900 None:intergenic 35.0%
GATTCTAATTCCCCTGAAAA+TGG - chr3_4:78391890-78391909 Msa0524850:CDS 35.0%
! ATTTGAGCCTAATGGTGTTA+CGG - chr3_4:78391973-78391992 Msa0524850:CDS 35.0%
CTACACAACCTTCTAATAGA+AGG + chr3_4:78392076-78392095 None:intergenic 35.0%
TCTATTAGAAGGTTGTGTAG+TGG - chr3_4:78392076-78392095 Msa0524850:CDS 35.0%
GACTATTAGGACTCATTTGA+TGG - chr3_4:78392144-78392163 Msa0524850:CDS 35.0%
TATTAGGACTCATTTGATGG+TGG - chr3_4:78392147-78392166 Msa0524850:CDS 35.0%
! ATTAGGACTCATTTGATGGT+GGG - chr3_4:78392148-78392167 Msa0524850:CDS 35.0%
AATATCCTGGAAAACATCAG+CGG + chr3_4:78392191-78392210 None:intergenic 35.0%
! TATGAAAACTGATGGATGGA+AGG - chr3_4:78392210-78392229 Msa0524850:CDS 35.0%
! ATGAAAACTGATGGATGGAA+GGG - chr3_4:78392211-78392230 Msa0524850:CDS 35.0%
!! TGATACTTGGTTGTTTTCAG+TGG - chr3_4:78392347-78392366 Msa0524850:intron 35.0%
!!! TGGTGTTTTGATAATGTTGC+TGG - chr3_4:78392367-78392386 Msa0524850:intron 35.0%
ACAAAAACTATACCGAGCAT+TGG + chr3_4:78392593-78392612 None:intergenic 35.0%
ACAAAATTGTGTGGTTAAGC+AGG - chr3_4:78392625-78392644 Msa0524850:intron 35.0%
CAACCATCTCTATATCTACA+AGG + chr3_4:78392671-78392690 None:intergenic 35.0%
GGTATTAACTACTAACCAAC+GGG - chr3_4:78392808-78392827 Msa0524850:intron 35.0%
! AAGAGTACGTTGAAATGGAA+TGG - chr3_4:78392898-78392917 Msa0524850:intron 35.0%
AGAGTACGTTGAAATGGAAT+GGG - chr3_4:78392899-78392918 Msa0524850:intron 35.0%
AACTACATCACCACTAAACT+AGG - chr3_4:78392989-78393008 Msa0524850:intron 35.0%
ATAAGTGGTACCTACACTTT+AGG + chr3_4:78393042-78393061 None:intergenic 35.0%
!! TCAGCATGTTCGAGTTTTTA+AGG + chr3_4:78393184-78393203 None:intergenic 35.0%
! TTTGGTTTATTGCAAGTCAG+AGG + chr3_4:78393243-78393262 None:intergenic 35.0%
TTAAGAGAGATGCAGCAAAA+TGG + chr3_4:78393275-78393294 None:intergenic 35.0%
TATTGTTTCAGTATAGGCTC+TGG + chr3_4:78393539-78393558 None:intergenic 35.0%
TGTCAAAATTTCAAGCTGTG+TGG + chr3_4:78393617-78393636 None:intergenic 35.0%
!!! AACTTCTCCTTTTGGTTCAT+TGG - chr3_4:78393854-78393873 Msa0524850:intron 35.0%
ATTGAGAAAATTCCAGATGG+AGG + chr3_4:78393900-78393919 None:intergenic 35.0%
! GCATTTGAAATGACAGATCT+TGG + chr3_4:78394007-78394026 None:intergenic 35.0%
!!! GTTGATGATCTTTTAGTGAC+TGG + chr3_4:78394076-78394095 None:intergenic 35.0%
!!! GTGCTTGTTTTAACCCATAA+AGG - chr3_4:78394218-78394237 Msa0524850:intron 35.0%
!! AAGCTGATTTGACATCTAAC+TGG - chr3_4:78394338-78394357 Msa0524850:intron 35.0%
ATTGTGTCTAATCTGGATAC+AGG - chr3_4:78394406-78394425 Msa0524850:intron 35.0%
AGAACAAAGCTCAATGTTGA+TGG + chr3_4:78394514-78394533 None:intergenic 35.0%
CCTCAAGATAGAAAAGTCAT+TGG + chr3_4:78394553-78394572 None:intergenic 35.0%
! CCAATGACTTTTCTATCTTG+AGG - chr3_4:78394550-78394569 Msa0524850:intron 35.0%
AAAAAACAAAACATGGGAGC+TGG + chr3_4:78394584-78394603 None:intergenic 35.0%
AAGCACGAAAAGATCCAAAA+TGG + chr3_4:78394642-78394661 None:intergenic 35.0%
! CTTAGAGATCCAGATGTTTT+CGG - chr3_4:78394811-78394830 Msa0524850:intron 35.0%
AAGAATCTACCGAAAACATC+TGG + chr3_4:78394823-78394842 None:intergenic 35.0%
!! ACTTGACAAAAAAGCACTTC+CGG + chr3_4:78394962-78394981 None:intergenic 35.0%
!! TTGTTTTGCACATGTTCCAA+AGG + chr3_4:78394998-78395017 None:intergenic 35.0%
TACTCATACCATGCTTCAAA+AGG - chr3_4:78395057-78395076 Msa0524850:intron 35.0%
TTATCTTGTAAAGCCTTGGT+TGG - chr3_4:78395084-78395103 Msa0524850:intron 35.0%
! TAAACAATTTTGGGCAGAAG+CGG + chr3_4:78395142-78395161 None:intergenic 35.0%
TAGATGTATGTTGCATGAGA+AGG + chr3_4:78395172-78395191 None:intergenic 35.0%
! TCACTAACTCCATTTTGTTC+GGG - chr3_4:78395222-78395241 Msa0524850:intron 35.0%
GCTCCAAGATTCAATTTCTA+AGG + chr3_4:78395338-78395357 None:intergenic 35.0%
CTTGAAATTCAAGCATGAAG+TGG + chr3_4:78395406-78395425 None:intergenic 35.0%
ACGACTTTACAAGAATGTGT+TGG + chr3_4:78395437-78395456 None:intergenic 35.0%
TATAGGCTACCTTGTATTGA+TGG - chr3_4:78395474-78395493 Msa0524850:intron 35.0%
CAAAGAACTCCATCAATACA+AGG + chr3_4:78395486-78395505 None:intergenic 35.0%
! TGTATTGATGGAGTTCTTTG+AGG - chr3_4:78395486-78395505 Msa0524850:intron 35.0%
TTCCATTTCCCAAAACTGTT+TGG + chr3_4:78395557-78395576 None:intergenic 35.0%
AAGAAGAAAGACATGTCAAG+AGG + chr3_4:78395645-78395664 None:intergenic 35.0%
!! ACTGACTTGAGTGAAATAAG+CGG - chr3_4:78395725-78395744 Msa0524850:intron 35.0%
CTTCTCATTTGATCCAATTG+AGG + chr3_4:78395760-78395779 None:intergenic 35.0%
ATTCTTAGGGTCAAAATGAG+AGG + chr3_4:78395789-78395808 None:intergenic 35.0%
GATCAAAATCTGCTAAGTGT+TGG + chr3_4:78395888-78395907 None:intergenic 35.0%
ATCGTAATTTCAACGAGTTC+AGG + chr3_4:78395951-78395970 None:intergenic 35.0%
TGAACTCGTTGAAATTACGA+TGG - chr3_4:78395950-78395969 Msa0524850:intron 35.0%
TCAAAAGTCAGAATTGGCAA+CGG + chr3_4:78396005-78396024 None:intergenic 35.0%
!!! CTGACTTTTGAGATATGAGT+TGG - chr3_4:78396014-78396033 Msa0524850:intron 35.0%
ATTGATGCTTCATATCTCTC+AGG - chr3_4:78396515-78396534 Msa0524850:intron 35.0%
ATTTGAAGGAAGAATACGCA+GGG + chr3_4:78396724-78396743 None:intergenic 35.0%
TATTTGAAGGAAGAATACGC+AGG + chr3_4:78396725-78396744 None:intergenic 35.0%
!!! TGTTTTGAGGGTCATAATTC+TGG - chr3_4:78396763-78396782 Msa0524850:intron 35.0%
ATCACAAGGAGAGAAAAACT+CGG + chr3_4:78396841-78396860 None:intergenic 35.0%
GGCTCAGTTAAAATATCACA+AGG + chr3_4:78396855-78396874 None:intergenic 35.0%
!!! GTGATATTTTAACTGAGCCA+TGG - chr3_4:78396856-78396875 Msa0524850:intron 35.0%
!!! TATTTTAACTGAGCCATGGT+AGG - chr3_4:78396860-78396879 Msa0524850:intron 35.0%
! GTTTCAGTTTCCATTTTCAC+AGG - chr3_4:78397025-78397044 Msa0524850:intron 35.0%
!! GTGCCAATTTGTTGGTTATT+TGG - chr3_4:78397069-78397088 Msa0524850:intron 35.0%
! AAGAGTACGTTGAAATGGAA+TGG - chr3_4:78392898-78392917 Msa0524850:intron 35.0%
AGAGTACGTTGAAATGGAAT+GGG - chr3_4:78392899-78392918 Msa0524850:intron 35.0%
AACTACATCACCACTAAACT+AGG - chr3_4:78392989-78393008 Msa0524850:intron 35.0%
ATAAGTGGTACCTACACTTT+AGG + chr3_4:78393042-78393061 None:intergenic 35.0%
GAAGGAAAATCAGCAAATGA+TGG + chr3_4:78397521-78397540 None:intergenic 35.0%
! TTTTCCTTCAAACCTGTTTC+TGG - chr3_4:78397532-78397551 Msa0524850:intron 35.0%
TATACCAGAAACAGGTTTGA+AGG + chr3_4:78397539-78397558 None:intergenic 35.0%
TCACTAACACATACAGGTAA+GGG + chr3_4:78397743-78397762 None:intergenic 35.0%
!!! GTTTCTTGTTTTTTAGGTGG+GGG - chr3_4:78397998-78398017 Msa0524850:intron 35.0%
GGGGGTCTTAAATGTATAAA+TGG - chr3_4:78398016-78398035 Msa0524850:intron 35.0%
AAATGTATAAATGGCCCATC+AGG - chr3_4:78398025-78398044 Msa0524850:intron 35.0%
TGATTAGTGATATTGCAGAG+AGG - chr3_4:78398580-78398599 Msa0524850:CDS 35.0%
! TTATTTTCATGAACGCGTCA+AGG + chr3_4:78398621-78398640 None:intergenic 35.0%
GGAATAACTCCAATAAGACT+AGG + chr3_4:78398685-78398704 None:intergenic 35.0%
! AAGTAATTGGTAGCCGAATA+TGG + chr3_4:78398706-78398725 None:intergenic 35.0%
AAGACAGGTCTACAAAAATG+TGG - chr3_4:78398891-78398910 Msa0524850:CDS 35.0%
TTGTTCTAGTATGCTCAGAA+GGG + chr3_4:78398923-78398942 None:intergenic 35.0%
TGAGCATACTAGAACAAGAA+GGG - chr3_4:78398926-78398945 Msa0524850:CDS 35.0%
GATATTGATAGATAACGACG+AGG - chr3_4:78399041-78399060 Msa0524850:CDS 35.0%
ACAGCAACACTGCACAAAAA+GGG - chr3_4:78391469-78391488 Msa0524850:intron 40.0%
TGTCACTCTGTGCTAAGAAA+AGG - chr3_4:78391658-78391677 Msa0524850:three_prime_UTR 40.0%
CTACCCATGAACCAAAAAAC+AGG + chr3_4:78391719-78391738 None:intergenic 40.0%
!!! CTGTTTTTTGGTTCATGGGT+AGG - chr3_4:78391717-78391736 Msa0524850:three_prime_UTR 40.0%
GAGGATTACTATTATCCTGG+TGG - chr3_4:78391806-78391825 Msa0524850:CDS 40.0%
!! TTTGCTAGTGTTGGTCAAGT+GGG - chr3_4:78391833-78391852 Msa0524850:CDS 40.0%
CAGGGGAATTAGAATCAGAA+GGG + chr3_4:78391886-78391905 None:intergenic 40.0%
TCAGGGGAATTAGAATCAGA+AGG + chr3_4:78391887-78391906 None:intergenic 40.0%
! TAGGGTCATCACCATTTTCA+GGG + chr3_4:78391904-78391923 None:intergenic 40.0%
! TTAGGGTCATCACCATTTTC+AGG + chr3_4:78391905-78391924 None:intergenic 40.0%
! CTCTGGAAATTTGAGCCTAA+TGG - chr3_4:78391965-78391984 Msa0524850:CDS 40.0%
!! TTTGAGCCTAATGGTGTTAC+GGG - chr3_4:78391974-78391993 Msa0524850:CDS 40.0%
GGAAGGTGAACAAGTTGTTA+AGG - chr3_4:78392003-78392022 Msa0524850:CDS 40.0%
!! TGCAATTTCTAGAACCACTG+TGG - chr3_4:78392111-78392130 Msa0524850:CDS 40.0%
TGAGTCCTAATAGTCTCCAA+AGG + chr3_4:78392139-78392158 None:intergenic 40.0%
! ATGGATGGAAGGGTTTGTTT+AGG - chr3_4:78392221-78392240 Msa0524850:CDS 40.0%
! TGGATGGAAGGGTTTGTTTA+GGG - chr3_4:78392222-78392241 Msa0524850:CDS 40.0%
! ATTACCTCAATAGCCTTGCT+AGG + chr3_4:78392277-78392296 None:intergenic 40.0%
GGATTTAATGCACCAATGCT+CGG - chr3_4:78392578-78392597 Msa0524850:CDS 40.0%
AGAGCTAGGACAAAATTGTG+TGG - chr3_4:78392616-78392635 Msa0524850:intron 40.0%
CCATCTCTATATCTACAAGG+AGG + chr3_4:78392668-78392687 None:intergenic 40.0%
CCTCCTTGTAGATATAGAGA+TGG - chr3_4:78392665-78392684 Msa0524850:intron 40.0%
TACCTTTGAGTCAGAGAACT+GGG + chr3_4:78392792-78392811 None:intergenic 40.0%
ATACCTTTGAGTCAGAGAAC+TGG + chr3_4:78392793-78392812 None:intergenic 40.0%
AAAATTGGCGGGAATAGTGT+TGG - chr3_4:78392837-78392856 Msa0524850:intron 40.0%
!! CGGGAATAGTGTTGGTTATT+TGG - chr3_4:78392845-78392864 Msa0524850:intron 40.0%
ACTGCTTTCTCCTAAAGTGT+AGG - chr3_4:78393029-78393048 Msa0524850:intron 40.0%
TTAACACTCCTCCTTGCTTT+AGG - chr3_4:78393136-78393155 Msa0524850:intron 40.0%
AGTTTGCAGATCCTAAAGCA+AGG + chr3_4:78393150-78393169 None:intergenic 40.0%
AAAAACTCGAACATGCTGAC+AGG - chr3_4:78393185-78393204 Msa0524850:intron 40.0%
GCAAAATGGAGAAGTGACTT+TGG + chr3_4:78393261-78393280 None:intergenic 40.0%
GGCAGCAATTGCAATTTCAA+AGG + chr3_4:78393348-78393367 None:intergenic 40.0%
TTGAAATTGCAATTGCTGCC+TGG - chr3_4:78393348-78393367 Msa0524850:intron 40.0%
! CAGCCGTAAATCAAGTTTTG+TGG + chr3_4:78393439-78393458 None:intergenic 40.0%
!!! TAGGCTCTGGAGTTTTTTCA+TGG + chr3_4:78393526-78393545 None:intergenic 40.0%
! TGGATTCTCTGATAGTGACT+GGG + chr3_4:78393597-78393616 None:intergenic 40.0%
! GTTAAAGGCACGGTTGATTA+TGG + chr3_4:78393656-78393675 None:intergenic 40.0%
AAGTTGACGAAGGATACTAC+AGG + chr3_4:78393811-78393830 None:intergenic 40.0%
TAGCACACCAATGAACCAAA+AGG + chr3_4:78393864-78393883 None:intergenic 40.0%
TAGTGACTGGAGATGATACA+AGG + chr3_4:78394063-78394082 None:intergenic 40.0%
ACTCTTTACGTGAAACATGC+AGG + chr3_4:78394127-78394146 None:intergenic 40.0%
TGCATGTTTCACGTAAAGAG+TGG - chr3_4:78394126-78394145 Msa0524850:intron 40.0%
! TTTCACGTAAAGAGTGGACT+CGG - chr3_4:78394132-78394151 Msa0524850:intron 40.0%
TGGGTTAAAACAAGCACCAA+GGG + chr3_4:78394215-78394234 None:intergenic 40.0%
! ATGGGTTAAAACAAGCACCA+AGG + chr3_4:78394216-78394235 None:intergenic 40.0%
ATACCCTTTAACTACGAGTC+TGG - chr3_4:78394468-78394487 Msa0524850:intron 40.0%
ATGGAAAAATGCAATGGAGG+AGG + chr3_4:78394623-78394642 None:intergenic 40.0%
!! AACTCGGTTGTTTGCTTTTC+AGG - chr3_4:78394769-78394788 Msa0524850:intron 40.0%
TTTCAACGAAGACCAGCAAT+GGG + chr3_4:78394851-78394870 None:intergenic 40.0%
ATTTCAACGAAGACCAGCAA+TGG + chr3_4:78394852-78394871 None:intergenic 40.0%
! ATAGTCAGTGTTTCGGTTTG+AGG - chr3_4:78394886-78394905 Msa0524850:intron 40.0%
GGGATACAGTTCACTTTCAA+AGG + chr3_4:78394929-78394948 None:intergenic 40.0%
!! CTTGACAAAAAAGCACTTCC+GGG + chr3_4:78394961-78394980 None:intergenic 40.0%
AGTTTGTCACGCTTAACCTT+TGG - chr3_4:78394979-78394998 Msa0524850:intron 40.0%
! TCAAAATCGACTTCCAACCA+AGG + chr3_4:78395100-78395119 None:intergenic 40.0%
GCTTCTGCCCAAAATTGTTT+AGG - chr3_4:78395141-78395160 Msa0524850:intron 40.0%
!! TCTAAGGTCTGATAATGGCA+AGG + chr3_4:78395322-78395341 None:intergenic 40.0%
!! AAGATGGTGGAAACTCAAAG+TGG + chr3_4:78395360-78395379 None:intergenic 40.0%
AAATTCAAGCATGAAGTGGC+TGG + chr3_4:78395402-78395421 None:intergenic 40.0%
!!! CTCCAAACAGTTTTGGGAAA+TGG - chr3_4:78395552-78395571 Msa0524850:intron 40.0%
! GGCAAATGATCAGAAAGTAC+CGG - chr3_4:78395615-78395634 Msa0524850:intron 40.0%
CTCATTTGATCCAATTGAGG+AGG + chr3_4:78395757-78395776 None:intergenic 40.0%
TCATCTTTGACATCACTGGT+CGG + chr3_4:78395815-78395834 None:intergenic 40.0%
TGTCTCATCTTTGACATCAC+TGG + chr3_4:78395819-78395838 None:intergenic 40.0%
! ATGGTTCCTTTTCCTTTTGC+AGG - chr3_4:78395969-78395988 Msa0524850:intron 40.0%
GGTGTCTATATTCCTGCAAA+AGG + chr3_4:78395984-78396003 None:intergenic 40.0%
CTAAGAGTAGTTCAGAATGC+TGG + chr3_4:78396103-78396122 None:intergenic 40.0%
TTCATCTTGCTCTACAACCT+GGG - chr3_4:78396157-78396176 Msa0524850:intron 40.0%
! CATGAAGCTGTGATTTGCAA+AGG + chr3_4:78396209-78396228 None:intergenic 40.0%
ACTTCCAACTACATGATGCT+TGG - chr3_4:78396367-78396386 Msa0524850:intron 40.0%
! CAAGTCTTTTGTGTTCTCCA+AGG - chr3_4:78396487-78396506 Msa0524850:intron 40.0%
! TGAAGCATCAATAACCACCT+TGG + chr3_4:78396507-78396526 None:intergenic 40.0%
GCAAACAAGGTTAGGTTACT+CGG + chr3_4:78396590-78396609 None:intergenic 40.0%
!! GCAAGTACTGAACTTGATGA+GGG + chr3_4:78396681-78396700 None:intergenic 40.0%
!! TGCAAGTACTGAACTTGATG+AGG + chr3_4:78396682-78396701 None:intergenic 40.0%
TTTGAAGGAAGAATACGCAG+GGG + chr3_4:78396723-78396742 None:intergenic 40.0%
GAGAAAAACTCGGAAAGCAA+AGG + chr3_4:78396831-78396850 None:intergenic 40.0%
ATGGTAGGATTATTCTGCAG+CGG - chr3_4:78396875-78396894 Msa0524850:intron 40.0%
AGTAAGAATGGAGTCTTACC+TGG + chr3_4:78396948-78396967 None:intergenic 40.0%
ACTGCTTTCTCCTAAAGTGT+AGG - chr3_4:78393029-78393048 Msa0524850:intron 40.0%
TGAAGGGTAATCTAGTGCAA+GGG + chr3_4:78397627-78397646 None:intergenic 40.0%
GTCACTAACACATACAGGTA+AGG + chr3_4:78397744-78397763 None:intergenic 40.0%
! AGTGTGTCACTAACACATAC+AGG + chr3_4:78397749-78397768 None:intergenic 40.0%
AAAGAGTTAAAAGAGGGCCA+GGG + chr3_4:78397907-78397926 None:intergenic 40.0%
TAAAGAGTTAAAAGAGGGCC+AGG + chr3_4:78397908-78397927 None:intergenic 40.0%
!! GCCCTCTTTTAACTCTTTAG+TGG - chr3_4:78397909-78397928 Msa0524850:intron 40.0%
!! TGCTCATTGACTTACCTGAT+GGG + chr3_4:78398042-78398061 None:intergenic 40.0%
!! TTGCTCATTGACTTACCTGA+TGG + chr3_4:78398043-78398062 None:intergenic 40.0%
! TGCGCAGAAAATTTGAAGCA+CGG + chr3_4:78398082-78398101 None:intergenic 40.0%
CAATCAATGATGCAGGAACT+GGG + chr3_4:78398302-78398321 None:intergenic 40.0%
!! CTAGTCTTGAGTAGTTCAAG+CGG + chr3_4:78398366-78398385 None:intergenic 40.0%
CAAGACTAGACTAACTATCC+AGG - chr3_4:78398377-78398396 Msa0524850:intron 40.0%
!! TTGCAGAGAGGTGTTTACAA+TGG - chr3_4:78398592-78398611 Msa0524850:CDS 40.0%
AGTGTCGTAGGCAAAGTAAT+TGG + chr3_4:78398719-78398738 None:intergenic 40.0%
!! AACCCTTTTGATTGGTTCAG+CGG - chr3_4:78398792-78398811 Msa0524850:CDS 40.0%
! TACTGCAACTTTTCCACTTG+AGG - chr3_4:78398831-78398850 Msa0524850:CDS 40.0%
CTTGTTCTAGTATGCTCAGA+AGG + chr3_4:78398924-78398943 None:intergenic 40.0%
CTGAGCATACTAGAACAAGA+AGG - chr3_4:78398925-78398944 Msa0524850:CDS 40.0%
ACACATGAAAGAGATTCCAG+CGG + chr3_4:78399004-78399023 None:intergenic 40.0%
ATTGATAGATAACGACGAGG+AGG - chr3_4:78399044-78399063 Msa0524850:CDS 40.0%
!! TTTTTCAACCCCTCTGAGAA+TGG - chr3_4:78399174-78399193 Msa0524850:five_prime_UTR 40.0%
ACCAACATTCCATTCTCAGA+GGG + chr3_4:78399186-78399205 None:intergenic 40.0%
AACCAACATTCCATTCTCAG+AGG + chr3_4:78399187-78399206 None:intergenic 40.0%
TGTTTATTTACGTTGCTGCC+AGG - chr3_4:78399210-78399229 Msa0524850:five_prime_UTR 40.0%
CACAGCAACACTGCACAAAA+AGG - chr3_4:78391468-78391487 Msa0524850:intron 45.0%
CAGCAACACTGCACAAAAAG+GGG - chr3_4:78391470-78391489 Msa0524850:intron 45.0%
AGCAACACTGCACAAAAAGG+GGG - chr3_4:78391471-78391490 Msa0524850:intron 45.0%
ATGAATGCTCTTCGTGTGTG+CGG + chr3_4:78391519-78391538 None:intergenic 45.0%
ACACTAGCAAACAAACCACC+AGG + chr3_4:78391824-78391843 None:intergenic 45.0%
!! GGTGGTTTGTTTGCTAGTGT+TGG - chr3_4:78391824-78391843 Msa0524850:CDS 45.0%
!! GTTTGCTAGTGTTGGTCAAG+TGG - chr3_4:78391832-78391851 Msa0524850:CDS 45.0%
!! AGTGTTGGTCAAGTGGGAAT+AGG - chr3_4:78391839-78391858 Msa0524850:CDS 45.0%
! GTGTTGGTCAAGTGGGAATA+GGG - chr3_4:78391840-78391859 Msa0524850:CDS 45.0%
! GAATCAGAAGGGTTTGGTTG+TGG + chr3_4:78391875-78391894 None:intergenic 45.0%
! AGGGTCATCACCATTTTCAG+GGG + chr3_4:78391903-78391922 None:intergenic 45.0%
! TTGTGTAGTGGAGCAATTGC+TGG - chr3_4:78392088-78392107 Msa0524850:CDS 45.0%
! TGGCACCTTTGGAGACTATT+AGG - chr3_4:78392131-78392150 Msa0524850:CDS 45.0%
!! CATTTGATGGTGGGAAGTAG+TGG - chr3_4:78392157-78392176 Msa0524850:CDS 45.0%
! TTCTACCGCTGATGTTTTCC+AGG - chr3_4:78392183-78392202 Msa0524850:CDS 45.0%
! GGATGGAAGGGTTTGTTTAG+GGG - chr3_4:78392223-78392242 Msa0524850:CDS 45.0%
! GTGGTTAAGCAGGTTTTGCT+AGG - chr3_4:78392635-78392654 Msa0524850:intron 45.0%
ACCAACGGGACTGTCAAAAT+TGG - chr3_4:78392822-78392841 Msa0524850:intron 45.0%
AACGGGACTGTCAAAATTGG+CGG - chr3_4:78392825-78392844 Msa0524850:intron 45.0%
! CAGGGAAGAGTACGTTGAAA+TGG - chr3_4:78392893-78392912 Msa0524850:intron 45.0%
TCACCACTAAACTAGGAACG+TGG - chr3_4:78392996-78393015 Msa0524850:intron 45.0%
CACCACTAAACTAGGAACGT+GGG - chr3_4:78392997-78393016 Msa0524850:intron 45.0%
ATCCCACGTTCCTAGTTTAG+TGG + chr3_4:78393002-78393021 None:intergenic 45.0%
! TGCTTTTGGACTGCATTACG+TGG + chr3_4:78393112-78393131 None:intergenic 45.0%
TTGCAGATCCTAAAGCAAGG+AGG + chr3_4:78393147-78393166 None:intergenic 45.0%
! TTAGTCTTCCCATGACACAC+TGG - chr3_4:78393320-78393339 Msa0524850:intron 45.0%
CAAAGGATCCAGTGTGTCAT+GGG + chr3_4:78393331-78393350 None:intergenic 45.0%
TCAAAGGATCCAGTGTGTCA+TGG + chr3_4:78393332-78393351 None:intergenic 45.0%
TATGAACTCAGCTTCTGCAG+TGG - chr3_4:78393469-78393488 Msa0524850:intron 45.0%
TTCATGGTGCACAAAGAAGC+AGG + chr3_4:78393510-78393529 None:intergenic 45.0%
!! GATGACATGAAGAGCACTTC+AGG + chr3_4:78393563-78393582 None:intergenic 45.0%
! GTGGATTCTCTGATAGTGAC+TGG + chr3_4:78393598-78393617 None:intergenic 45.0%
CACAATGCATAAAGCGAGAG+AGG - chr3_4:78393720-78393739 Msa0524850:intron 45.0%
GGATACTACAGGAGTCTGAT+CGG + chr3_4:78393800-78393819 None:intergenic 45.0%
!! GGTGCTGATAAAGTTGACGA+AGG + chr3_4:78393821-78393840 None:intergenic 45.0%
GAGAAGTTGAGCAAGGAAGA+TGG + chr3_4:78393842-78393861 None:intergenic 45.0%
CCAAAAGGAGAAGTTGAGCA+AGG + chr3_4:78393849-78393868 None:intergenic 45.0%
! CCTTGCTCAACTTCTCCTTT+TGG - chr3_4:78393846-78393865 Msa0524850:intron 45.0%
! ATTCCAGATGGAGGAGTGTA+AGG + chr3_4:78393891-78393910 None:intergenic 45.0%
GACTGGAGATGATACAAGGT+TGG + chr3_4:78394059-78394078 None:intergenic 45.0%
TAAAACAAGCACCAAGGGCT+TGG + chr3_4:78394210-78394229 None:intergenic 45.0%
ACCTTGCATCACAAATCCCT+CGG - chr3_4:78394273-78394292 Msa0524850:intron 45.0%
TTAGCAGTTGCTGCTCAAAG+GGG + chr3_4:78394376-78394395 None:intergenic 45.0%
GTTAGCAGTTGCTGCTCAAA+GGG + chr3_4:78394377-78394396 None:intergenic 45.0%
TGTTAGCAGTTGCTGCTCAA+AGG + chr3_4:78394378-78394397 None:intergenic 45.0%
! GGATACAGGTGCAAAAGTGT+CGG - chr3_4:78394420-78394439 Msa0524850:intron 45.0%
AGGCCAGACTCGTAGTTAAA+GGG + chr3_4:78394474-78394493 None:intergenic 45.0%
AAGGCCAGACTCGTAGTTAA+AGG + chr3_4:78394475-78394494 None:intergenic 45.0%
GAAGATGATCCCTCCATTAG+AGG + chr3_4:78394733-78394752 None:intergenic 45.0%
CTGTATCCCACAAAAATGCC+CGG - chr3_4:78394940-78394959 Msa0524850:intron 45.0%
CCTTACACTCCCGAACAAAA+TGG + chr3_4:78395234-78395253 None:intergenic 45.0%
!! CCATTTTGTTCGGGAGTGTA+AGG - chr3_4:78395231-78395250 Msa0524850:intron 45.0%
CTCATTCACACAGATGTTGC+AGG + chr3_4:78395513-78395532 None:intergenic 45.0%
! AGTGGCTCTCCAAACAGTTT+TGG - chr3_4:78395545-78395564 Msa0524850:intron 45.0%
! GTGGCTCTCCAAACAGTTTT+GGG - chr3_4:78395546-78395565 Msa0524850:intron 45.0%
AACTGCAATGCTTGCCAGTT+TGG + chr3_4:78395594-78395613 None:intergenic 45.0%
! AACTGGCAAGCATTGCAGTT+TGG - chr3_4:78395594-78395613 Msa0524850:intron 45.0%
AGACATGTCAAGAGGTCTAC+CGG + chr3_4:78395637-78395656 None:intergenic 45.0%
AAGTCAGTCCCACTGAACTT+TGG + chr3_4:78395713-78395732 None:intergenic 45.0%
CATCTTTGACATCACTGGTC+GGG + chr3_4:78395814-78395833 None:intergenic 45.0%
CTTCATCTTGCTCTACAACC+TGG - chr3_4:78396156-78396175 Msa0524850:intron 45.0%
ACAACTTGAAGTCAAAGCCC+AGG + chr3_4:78396177-78396196 None:intergenic 45.0%
GTTCAGATGTTGGAGAAGAC+CGG + chr3_4:78396264-78396283 None:intergenic 45.0%
GGTCTTCTCCAACATCTGAA+CGG - chr3_4:78396263-78396282 Msa0524850:intron 45.0%
! TGCGAGCACTGTGGTAAAAT+GGG + chr3_4:78396296-78396315 None:intergenic 45.0%
! TTGCGAGCACTGTGGTAAAA+TGG + chr3_4:78396297-78396316 None:intergenic 45.0%
! ATTTTACCACAGTGCTCGCA+AGG - chr3_4:78396296-78396315 Msa0524850:intron 45.0%
GGCAACCAAAGCAAAGATAG+AGG + chr3_4:78396341-78396360 None:intergenic 45.0%
!! CATGTAGTTGGAAGTACTGC+AGG + chr3_4:78396362-78396381 None:intergenic 45.0%
AGGCAAGATCATGTGGTTGA+AGG + chr3_4:78396404-78396423 None:intergenic 45.0%
GCTTATGAGGCAAGATCATG+TGG + chr3_4:78396411-78396430 None:intergenic 45.0%
AAGAGCAACGAAGGCTTATG+AGG + chr3_4:78396424-78396443 None:intergenic 45.0%
! GTCTTTTGTGTTCTCCAAGG+TGG - chr3_4:78396490-78396509 Msa0524850:intron 45.0%
GCTGCAGAATAATCCTACCA+TGG + chr3_4:78396876-78396895 None:intergenic 45.0%
AAGAATGGAGTCTTACCTGG+AGG + chr3_4:78396945-78396964 None:intergenic 45.0%
ACTCCATTCTTACTGCCCAA+AGG - chr3_4:78396954-78396973 Msa0524850:intron 45.0%
TGACCTTTGGGCAGTAAGAA+TGG + chr3_4:78396960-78396979 None:intergenic 45.0%
TGGGGAGAACTATGACCTTT+GGG + chr3_4:78396972-78396991 None:intergenic 45.0%
ATGGGGAGAACTATGACCTT+TGG + chr3_4:78396973-78396992 None:intergenic 45.0%
TAGTTCTCCCCATCAAAGAC+AGG - chr3_4:78396980-78396999 Msa0524850:intron 45.0%
TTGCTCCTCCTGTCTTTGAT+GGG + chr3_4:78396991-78397010 None:intergenic 45.0%
TCTTACGGGACCTGTGAAAA+TGG + chr3_4:78397038-78397057 None:intergenic 45.0%
CACCAGAGCTATCATCTTAC+GGG + chr3_4:78397052-78397071 None:intergenic 45.0%
GCACCAGAGCTATCATCTTA+CGG + chr3_4:78397053-78397072 None:intergenic 45.0%
!! TAGCTCTGGTGCCAATTTGT+TGG - chr3_4:78397061-78397080 Msa0524850:intron 45.0%
! CAGGGAAGAGTACGTTGAAA+TGG - chr3_4:78392893-78392912 Msa0524850:intron 45.0%
TCACCACTAAACTAGGAACG+TGG - chr3_4:78392996-78393015 Msa0524850:intron 45.0%
CACCACTAAACTAGGAACGT+GGG - chr3_4:78392997-78393016 Msa0524850:intron 45.0%
ATCCCACGTTCCTAGTTTAG+TGG + chr3_4:78393002-78393021 None:intergenic 45.0%
! TGCTTTTGGACTGCATTACG+TGG + chr3_4:78393112-78393131 None:intergenic 45.0%
GAAGGGTAATCTAGTGCAAG+GGG + chr3_4:78397626-78397645 None:intergenic 45.0%
CTGAAGGGTAATCTAGTGCA+AGG + chr3_4:78397628-78397647 None:intergenic 45.0%
TGCTCTCCATGACAGATAGT+TGG - chr3_4:78397819-78397838 Msa0524850:intron 45.0%
TTCCATGCCTTTCATTTCCC+TGG - chr3_4:78397887-78397906 Msa0524850:intron 45.0%
GCAATCAATGATGCAGGAAC+TGG + chr3_4:78398303-78398322 None:intergenic 45.0%
! GTTCCTGCATCATTGATTGC+AGG - chr3_4:78398303-78398322 Msa0524850:intron 45.0%
CTCCAATAAGACTAGGTGTC+AGG + chr3_4:78398678-78398697 None:intergenic 45.0%
AGCCGCTGAACCAATCAAAA+GGG + chr3_4:78398797-78398816 None:intergenic 45.0%
! TGCAACTTTTCCACTTGAGG+TGG - chr3_4:78398834-78398853 Msa0524850:CDS 45.0%
ACTAGAACAAGAAGGGATCC+AGG - chr3_4:78398933-78398952 Msa0524850:CDS 45.0%
CTAGAACAAGAAGGGATCCA+GGG - chr3_4:78398934-78398953 Msa0524850:CDS 45.0%
GGATCCAGGGTCTATATAGA+GGG - chr3_4:78398947-78398966 Msa0524850:CDS 45.0%
GGCACTAACTTCATGCAACT+AGG + chr3_4:78398979-78398998 None:intergenic 45.0%
AGATAACGACGAGGAGGAAT+AGG - chr3_4:78399050-78399069 Msa0524850:CDS 45.0%
TATGCAGCAGTTCCACAACT+TGG + chr3_4:78399099-78399118 None:intergenic 45.0%
CCAACATTCCATTCTCAGAG+GGG + chr3_4:78399185-78399204 None:intergenic 45.0%
CCAAGACACAATGAAAAGCC+TGG + chr3_4:78399231-78399250 None:intergenic 45.0%
! CCAGGCTTTTCATTGTGTCT+TGG - chr3_4:78399228-78399247 Msa0524850:five_prime_UTR 45.0%
GGTCAAGTGGGAATAGGGTT+TGG - chr3_4:78391845-78391864 Msa0524850:CDS 50.0%
!! CCTAATGGTGTTACGGGCAA+GGG - chr3_4:78391980-78391999 Msa0524850:CDS 50.0%
!! CTAATGGTGTTACGGGCAAG+GGG - chr3_4:78391981-78392000 Msa0524850:CDS 50.0%
!! TAATGGTGTTACGGGCAAGG+GGG - chr3_4:78391982-78392001 Msa0524850:CDS 50.0%
TAGAACCACTGTGGCACCTT+TGG - chr3_4:78392120-78392139 Msa0524850:CDS 50.0%
TGTGCAATGATATCCACCCC+TGG - chr3_4:78392697-78392716 Msa0524850:intron 50.0%
GTGCAATGATATCCACCCCT+GGG - chr3_4:78392698-78392717 Msa0524850:intron 50.0%
TGCAATGATATCCACCCCTG+GGG - chr3_4:78392699-78392718 Msa0524850:intron 50.0%
!! ATGGCTCTAGATAGACCCCA+GGG + chr3_4:78392717-78392736 None:intergenic 50.0%
AGCCCAGTTCTCTGACTCAA+AGG - chr3_4:78392787-78392806 Msa0524850:intron 50.0%
!! GCCAATTTTGACAGTCCCGT+TGG + chr3_4:78392826-78392845 None:intergenic 50.0%
ACGGGACTGTCAAAATTGGC+GGG - chr3_4:78392826-78392845 Msa0524850:intron 50.0%
TCGAACATGCTGACAGGAAG+TGG - chr3_4:78393191-78393210 Msa0524850:intron 50.0%
! TTCTCTGATAGTGACTGGGC+TGG + chr3_4:78393593-78393612 None:intergenic 50.0%
CCTTGCATCACAAATCCCTC+GGG - chr3_4:78394274-78394293 Msa0524850:intron 50.0%
ATATATGTGGAGCAGCCCGA+GGG + chr3_4:78394292-78394311 None:intergenic 50.0%
! AGCCTTGTGCCTCTAATGGA+GGG - chr3_4:78394721-78394740 Msa0524850:intron 50.0%
! ATCCCTCCATTAGAGGCACA+AGG + chr3_4:78394726-78394745 None:intergenic 50.0%
GATTCTTCCAGTCCCATTGC+TGG - chr3_4:78394836-78394855 Msa0524850:intron 50.0%
! GCACTTCCGGGCATTTTTGT+GGG + chr3_4:78394949-78394968 None:intergenic 50.0%
! AGCACTTCCGGGCATTTTTG+TGG + chr3_4:78394950-78394969 None:intergenic 50.0%
GAACTTTGGCACAAGCGACT+CGG + chr3_4:78395699-78395718 None:intergenic 50.0%
TCGCTTGTGCCAAAGTTCAG+TGG - chr3_4:78395701-78395720 Msa0524850:intron 50.0%
CGCTTGTGCCAAAGTTCAGT+GGG - chr3_4:78395702-78395721 Msa0524850:intron 50.0%
CACTGGTCGGGAGATTCTTA+GGG + chr3_4:78395802-78395821 None:intergenic 50.0%
TCACTGGTCGGGAGATTCTT+AGG + chr3_4:78395803-78395822 None:intergenic 50.0%
! GAATGCTGGCTGATTGACAG+TGG + chr3_4:78396089-78396108 None:intergenic 50.0%
TGCAGCAAGTGCAATCAGCT+TGG + chr3_4:78396233-78396252 None:intergenic 50.0%
CTTCTCCAACATCTGAACGG+TGG - chr3_4:78396266-78396285 Msa0524850:intron 50.0%
GTCATCCACCGTTCAGATGT+TGG + chr3_4:78396274-78396293 None:intergenic 50.0%
CCAGCCAAGCATCATGTAGT+TGG + chr3_4:78396374-78396393 None:intergenic 50.0%
CCAACTACATGATGCTTGGC+TGG - chr3_4:78396371-78396390 Msa0524850:intron 50.0%
AAGAATACGCAGGGGATGAG+AGG + chr3_4:78396715-78396734 None:intergenic 50.0%
GTAGGATTATTCTGCAGCGG+AGG - chr3_4:78396878-78396897 Msa0524850:intron 50.0%
!! CCTGGAGGCTTTGGATGTTT+GGG + chr3_4:78396930-78396949 None:intergenic 50.0%
!! ACCTGGAGGCTTTGGATGTT+TGG + chr3_4:78396931-78396950 None:intergenic 50.0%
TTCTCCCCATCAAAGACAGG+AGG - chr3_4:78396983-78397002 Msa0524850:intron 50.0%
TGCTCCTCCTGTCTTTGATG+GGG + chr3_4:78396990-78397009 None:intergenic 50.0%
GTTGCTCCTCCTGTCTTTGA+TGG + chr3_4:78396992-78397011 None:intergenic 50.0%
GTCCCGTAAGATGATAGCTC+TGG - chr3_4:78397047-78397066 Msa0524850:intron 50.0%
GACAGCCTCTCTACTTATGC+TGG - chr3_4:78397597-78397616 Msa0524850:intron 50.0%
GGCTTCCAGCATAAGTAGAG+AGG + chr3_4:78397605-78397624 None:intergenic 50.0%
CATTCGAAGAGGAAGGACCA+TGG + chr3_4:78397801-78397820 None:intergenic 50.0%
!! TGGAGAGCATTCGAAGAGGA+AGG + chr3_4:78397808-78397827 None:intergenic 50.0%
!! GTCATGGAGAGCATTCGAAG+AGG + chr3_4:78397812-78397831 None:intergenic 50.0%
AAGAGGGCCAGGGAAATGAA+AGG + chr3_4:78397897-78397916 None:intergenic 50.0%
AAGAACCTATCCGCAAAGCC+TGG - chr3_4:78398261-78398280 Msa0524850:intron 50.0%
TGATGCAGGAACTGGGAGTT+TGG + chr3_4:78398295-78398314 None:intergenic 50.0%
GCACCTGCAATCAATGATGC+AGG + chr3_4:78398309-78398328 None:intergenic 50.0%
AGTTGAACTCACTCCAGCAC+AGG + chr3_4:78398331-78398350 None:intergenic 50.0%
GGTCCTGCAGAACTTTACAG+AGG - chr3_4:78398652-78398671 Msa0524850:CDS 50.0%
AGGCCTCTGTAAAGTTCTGC+AGG + chr3_4:78398658-78398677 None:intergenic 50.0%
!! GGCCTGACACCTAGTCTTAT+TGG - chr3_4:78398673-78398692 Msa0524850:CDS 50.0%
ACTTTGCCTACGACACTCTG+CGG - chr3_4:78398722-78398741 Msa0524850:CDS 50.0%
CAGCCGCTGAACCAATCAAA+AGG + chr3_4:78398798-78398817 None:intergenic 50.0%
!! CTTTTGATTGGTTCAGCGGC+TGG - chr3_4:78398796-78398815 Msa0524850:CDS 50.0%
GCTCGCAAGCAAATGCAAGT+TGG - chr3_4:78398856-78398875 Msa0524850:CDS 50.0%
! ATGCAAGTTGGAGCTCTCAG+TGG - chr3_4:78398868-78398887 Msa0524850:CDS 50.0%
GGGATCCAGGGTCTATATAG+AGG - chr3_4:78398946-78398965 Msa0524850:CDS 50.0%
CAAGCCCTCTATATAGACCC+TGG + chr3_4:78398954-78398973 None:intergenic 50.0%
CAGGGTCTATATAGAGGGCT+TGG - chr3_4:78398952-78398971 Msa0524850:CDS 50.0%
ATGAAAGAGATTCCAGCGGC+TGG + chr3_4:78399000-78399019 None:intergenic 50.0%
TTTCCACCGAAGCCAAGTTG+TGG - chr3_4:78399084-78399103 Msa0524850:CDS 50.0%
GCAGTTCCACAACTTGGCTT+CGG + chr3_4:78399093-78399112 None:intergenic 50.0%
! CCCCTCTGAGAATGGAATGT+TGG - chr3_4:78399182-78399201 Msa0524850:five_prime_UTR 50.0%
! TGTGCGGAGGAGTGTGACTT+AGG + chr3_4:78391503-78391522 None:intergenic 55.0%
AATGCTCTTCGTGTGTGCGG+AGG + chr3_4:78391516-78391535 None:intergenic 55.0%
!! GCCTAATGGTGTTACGGGCA+AGG - chr3_4:78391979-78391998 Msa0524850:CDS 55.0%
CCCTTGCCCGTAACACCATT+AGG + chr3_4:78391983-78392002 None:intergenic 55.0%
!! AGTCTCCAAAGGTGCCACAG+TGG + chr3_4:78392128-78392147 None:intergenic 55.0%
TGCGCCTAGCAAGGCTATTG+AGG - chr3_4:78392270-78392289 Msa0524850:intron 55.0%
!! TGGCTCTAGATAGACCCCAG+GGG + chr3_4:78392716-78392735 None:intergenic 55.0%
!! CATGGCTCTAGATAGACCCC+AGG + chr3_4:78392718-78392737 None:intergenic 55.0%
! CTGGGGTCTATCTAGAGCCA+TGG - chr3_4:78392716-78392735 Msa0524850:intron 55.0%
CTGCCTTACACTCCTCCATC+TGG - chr3_4:78393885-78393904 Msa0524850:intron 55.0%
ATCCTGCTGTACCAAGCCCT+TGG - chr3_4:78394196-78394215 Msa0524850:intron 55.0%
CCCGAGGGATTTGTGATGCA+AGG + chr3_4:78394277-78394296 None:intergenic 55.0%
GATATATGTGGAGCAGCCCG+AGG + chr3_4:78394293-78394312 None:intergenic 55.0%
ATGTGAGCCTTCTTGCTGCG+AGG + chr3_4:78394665-78394684 None:intergenic 55.0%
! CAGCAGCCTTGTGCCTCTAA+TGG - chr3_4:78394717-78394736 Msa0524850:intron 55.0%
! CAGCCTTGTGCCTCTAATGG+AGG - chr3_4:78394720-78394739 Msa0524850:intron 55.0%
ACGAAGACCAGCAATGGGAC+TGG + chr3_4:78394846-78394865 None:intergenic 55.0%
TTGGGCAGAAGCGGCAAACA+CGG + chr3_4:78395133-78395152 None:intergenic 55.0%
! CACTTGCTGCACTTTGCGTC+CGG - chr3_4:78396242-78396261 Msa0524850:intron 55.0%
TTACCACAGTGCTCGCAAGG+TGG - chr3_4:78396299-78396318 Msa0524850:intron 55.0%
TACCACAGTGCTCGCAAGGT+GGG - chr3_4:78396300-78396319 Msa0524850:intron 55.0%
TGCAGGCTCAAGAGCAACGA+AGG + chr3_4:78396433-78396452 None:intergenic 55.0%
TGTTTGGGAGGCCGTTGAAG+AGG + chr3_4:78396915-78396934 None:intergenic 55.0%
!! GGAGGCTTTGGATGTTTGGG+AGG + chr3_4:78396927-78396946 None:intergenic 55.0%
CCCAAACATCCAAAGCCTCC+AGG - chr3_4:78396927-78396946 Msa0524850:intron 55.0%
GGAGTCTTACCTGGAGGCTT+TGG + chr3_4:78396939-78396958 None:intergenic 55.0%
GGCCAGGGAAATGAAAGGCA+TGG + chr3_4:78397892-78397911 None:intergenic 55.0%
TTGATTGCAGGTGCCTGTGC+TGG - chr3_4:78398315-78398334 Msa0524850:intron 55.0%
!! TGCTTTCCGCAGAGTGTCGT+AGG + chr3_4:78398731-78398750 None:intergenic 55.0%
TGGAGCTCTCAGTGGAAGAC+AGG - chr3_4:78398876-78398895 Msa0524850:CDS 55.0%
ATGAAGTTAGTGCCAGCCGC+TGG - chr3_4:78398985-78399004 Msa0524850:CDS 55.0%
GTTCCACAACTTGGCTTCGG+TGG + chr3_4:78399090-78399109 None:intergenic 55.0%
!! CATTCGGGTTGCGCCTAGCA+AGG - chr3_4:78392261-78392280 Msa0524850:intron 60.0%
CTCTAGATAGACCCCAGGGG+TGG + chr3_4:78392713-78392732 None:intergenic 60.0%
! CACCAAGGGCTTGGTACAGC+AGG + chr3_4:78394201-78394220 None:intergenic 60.0%
CAGTTGCTGCTCAAAGGGGC+TGG + chr3_4:78394372-78394391 None:intergenic 60.0%
CGTGCTTCCTCGCAGCAAGA+AGG - chr3_4:78394655-78394674 Msa0524850:intron 60.0%
GCGGTCTGCTCCTCCTCAAT+TGG - chr3_4:78395744-78395763 Msa0524850:intron 60.0%
! TACCCACCTTGCGAGCACTG+TGG + chr3_4:78396305-78396324 None:intergenic 60.0%
GCAGGGGATGAGAGGATTCG+AGG + chr3_4:78396707-78396726 None:intergenic 60.0%
GCTCTCCAGGCTTTGCGGAT+AGG + chr3_4:78398269-78398288 None:intergenic 60.0%
GGACTGCTCTCCAGGCTTTG+CGG + chr3_4:78398274-78398293 None:intergenic 60.0%
GGGAGTTTGGACTGCTCTCC+AGG + chr3_4:78398282-78398301 None:intergenic 60.0%
TGCTTGCGAGCCACCTCAAG+TGG + chr3_4:78398847-78398866 None:intergenic 60.0%
! GGTGTTACGGGCAAGGGGGA+AGG - chr3_4:78391986-78392005 Msa0524850:CDS 65.0%
GGCAGAAGCGGCAAACACGG+CGG + chr3_4:78395130-78395149 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 78391457 78399411 78391457 ID=Msa0524850;Name=Msa0524850
chr3_4 mRNA 78391457 78399411 78391457 ID=Msa0524850-mRNA-1;Parent=Msa0524850;Name=Msa0524850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=274|0.66|0.75|1|0.66|0.5|4|317|378
chr3_4 exon 78391457 78391486 78391457 ID=Msa0524850-mRNA-1:exon:23265;Parent=Msa0524850-mRNA-1
chr3_4 exon 78391510 78392270 78391510 ID=Msa0524850-mRNA-1:exon:23264;Parent=Msa0524850-mRNA-1
chr3_4 exon 78392530 78392631 78392530 ID=Msa0524850-mRNA-1:exon:23263;Parent=Msa0524850-mRNA-1
chr3_4 exon 78398577 78399411 78398577 ID=Msa0524850-mRNA-1:exon:23262;Parent=Msa0524850-mRNA-1
chr3_4 five_prime_UTR 78399138 78399411 78399138 ID=Msa0524850-mRNA-1:five_prime_utr;Parent=Msa0524850-mRNA-1
chr3_4 CDS 78398577 78399137 78398577 ID=Msa0524850-mRNA-1:cds;Parent=Msa0524850-mRNA-1
chr3_4 CDS 78392530 78392631 78392530 ID=Msa0524850-mRNA-1:cds;Parent=Msa0524850-mRNA-1
chr3_4 CDS 78391797 78392270 78391797 ID=Msa0524850-mRNA-1:cds;Parent=Msa0524850-mRNA-1
chr3_4 three_prime_UTR 78391510 78391796 78391510 ID=Msa0524850-mRNA-1:three_prime_utr;Parent=Msa0524850-mRNA-1
chr3_4 three_prime_UTR 78391457 78391486 78391457 ID=Msa0524850-mRNA-1:three_prime_utr;Parent=Msa0524850-mRNA-1
Gene Sequence

>Msa0524850

ATGGGTAGGAACAAAATCCAACTCTTTGATGACAAAAGAGATGGGTTTTTCTCTGTTTCAAATTTAGGGTCTCATGAGGATTACTATTATCCTGGTGGTTTGTTTGCTAGTGTTGGTCAAGTGGGAATAGGGTTTGGTGTTCCACAACCAAACCCTTCTGATTCTAATTCCCCTGAAAATGGTGATGACCCTAAATTTCCTTTTAGTGAATTATACGTTAAGTATATTCAATCACTCTGGAAATTTGAGCCTAATGGTGTTACGGGCAAGGGGGAAGGTGAACAAGTTGTTAAGGTGAAGAATAAAAATGGTGGGTTTAAGCTCAAGATTAAGATAAGGAATCCTTCTATTAGAAGGTTGTGTAGTGGAGCAATTGCTGGTGCAATTTCTAGAACCACTGTGGCACCTTTGGAGACTATTAGGACTCATTTGATGGTGGGAAGTAGTGGTCATTCTACCGCTGATGTTTTCCAGGATATTATGAAAACTGATGGATGGAAGGGTTTGTTTAGGGGAAATCTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCTATTGAGCTATTTGCTTATGATACGGTAAACAAGAACCTATCCGCAAAGCCTGGAGAGCAGTCCAAACTCCCAGTTCCTGCATCATTGATTGCAGGTGCCTGTGCTGGAAGAGGTGTTTACAATGGTCTCCTTGACGCGTTCATGAAAATAATTAAAGAAGAGGGTCCTGCAGAACTTTACAGAGGCCTGACACCTAGTCTTATTGGAGTTATTCCATATTCGGCTACCAATTACTTTGCCTACGACACTCTGCGGAAAGCATACCGAAAAATTTTCAAACAAGAGAAGATCGGCAACTTTGAAACCCTTTTGATTGGTTCAGCGGCTGGTGCTATTTCAAGTACTGCAACTTTTCCACTTGAGGTGGCTCGCAAGCAAATGCAAGTTGGAGCTCTCAGTGGAAGACAGGTCTACAAAAATGTGGTTCATGCCCTTCTGAGCATACTAGAACAAGAAGGGATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAGTTAGTGCCAGCCGCTGGAATCTCTTTCATGTGTTATGAAGCATGCAAGAAGATATTGATAGATAACGACGAGGAGGAATAG
Protein sequence

>Msa0524850

MGRNKIQLFDDKRDGFFSVSNLGSHEDYYYPGGLFASVGQVGIGFGVPQPNPSDSNSPENGDDPKFPFSELYVKYIQSLWKFEPNGVTGKGEGEQVVKVKNKNGGFKLKIKIRNPSIRRLCSGAIAGAISRTTVAPLETIRTHLMVGSSGHSTADVFQDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLPVPASLIAGACAGRGVYNGLLDAFMKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNFETLLIGSAAGAISSTATFPLEVARKQMQVGALSGRQVYKNVVHALLSILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDNDEEE*