Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0527410 | XP_003592452.2 | 98.276 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0527410 | sp|Q9FNY0|E2FA_ARATH | 56.930 | 469 | 158 | 12 | 16 | 458 | 30 | 480 | 6.79e-171 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0527410 | G7IE33 | 98.276 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 0.0 | 936 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0527410 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0119870 | Msa0527410 | 0.870090 | 1.897933e-66 | -8.615850e-47 |
| Msa0163180 | Msa0527410 | 0.844188 | 8.827029e-59 | -8.615850e-47 |
| Msa0182790 | Msa0527410 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0527410 | MtrunA17_Chr1g0177351 | 98.276 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 0.0 | 936 |
| Msa0527410 | MtrunA17_Chr4g0025881 | 59.459 | 444 | 168 | 8 | 25 | 461 | 19 | 457 | 1.18e-175 | 500 |
| Msa0527410 | MtrunA17_Chr3g0142581 | 48.986 | 296 | 137 | 4 | 127 | 422 | 89 | 370 | 2.86e-84 | 264 |
| Msa0527410 | MtrunA17_Chr4g0059551 | 44.776 | 67 | 37 | 0 | 143 | 209 | 17 | 83 | 4.29e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0527410 | AT2G36010.1 | 57.173 | 467 | 158 | 11 | 16 | 458 | 30 | 478 | 4.98e-174 | 497 |
| Msa0527410 | AT2G36010.3 | 56.930 | 469 | 158 | 12 | 16 | 458 | 30 | 480 | 6.90e-172 | 492 |
| Msa0527410 | AT5G22220.2 | 53.247 | 462 | 177 | 13 | 27 | 461 | 17 | 466 | 1.93e-143 | 419 |
| Msa0527410 | AT5G22220.3 | 52.790 | 466 | 182 | 13 | 22 | 461 | 10 | 463 | 1.01e-140 | 412 |
| Msa0527410 | AT2G36010.2 | 46.525 | 518 | 164 | 14 | 16 | 458 | 30 | 509 | 1.44e-134 | 398 |
| Msa0527410 | AT1G47870.1 | 47.319 | 317 | 117 | 7 | 105 | 420 | 124 | 391 | 2.05e-80 | 255 |
| Msa0527410 | AT1G47870.2 | 47.319 | 317 | 117 | 7 | 105 | 420 | 123 | 390 | 2.12e-80 | 254 |
| Msa0527410 | AT5G14960.1 | 41.304 | 92 | 49 | 1 | 136 | 227 | 6 | 92 | 1.75e-12 | 68.9 |
| Msa0527410 | AT3G48160.2 | 45.205 | 73 | 39 | 1 | 143 | 215 | 34 | 105 | 3.92e-11 | 65.1 |
| Msa0527410 | AT3G48160.1 | 45.205 | 73 | 39 | 1 | 143 | 215 | 34 | 105 | 4.10e-11 | 65.1 |
Find 182 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATGATCGGAGAGAAAT+TGG | 0.216241 | 3_4:+81793409 | None:intergenic |
| TGTAGAATGATGCTGATTAT+TGG | 0.219679 | 3_4:-81788650 | Msa0527410:intron |
| GTTTCGCTGCTGTTGATTCT+AGG | 0.229735 | 3_4:-81793215 | Msa0527410:CDS |
| AGGACATGATTTGCCTTCTT+TGG | 0.234385 | 3_4:+81791937 | None:intergenic |
| TTACCTCTTGCTTCAAGTTC+AGG | 0.236533 | 3_4:-81789005 | Msa0527410:CDS |
| GAGAAATTTGAAGAGATTAA+TGG | 0.237066 | 3_4:-81789047 | Msa0527410:CDS |
| TATCACTAAGTTAGAAAGTA+TGG | 0.250190 | 3_4:-81788330 | Msa0527410:three_prime_UTR |
| AATCAAAATCATCTCTGATT+AGG | 0.254900 | 3_4:+81788360 | None:intergenic |
| TGTGACCGAGGAAGATATTA+AGG | 0.256644 | 3_4:-81789620 | Msa0527410:CDS |
| GTGCACCCTTGAAGTTGTTT+GGG | 0.275713 | 3_4:+81787929 | None:intergenic |
| AGTGCACCCTTGAAGTTGTT+TGG | 0.292043 | 3_4:+81787928 | None:intergenic |
| CAATTGATGTCTACCTTATC+AGG | 0.299411 | 3_4:-81789235 | Msa0527410:intron |
| ATATGACATAACTAATGTTT+TGG | 0.312982 | 3_4:-81791425 | Msa0527410:CDS |
| ATCAAAATCATCTCTGATTA+GGG | 0.322568 | 3_4:+81788361 | None:intergenic |
| AATGAGGAAGGGAGGGAAGA+AGG | 0.344191 | 3_4:+81793491 | None:intergenic |
| TATCTTCCTCGGTCACAAAA+AGG | 0.345600 | 3_4:+81789626 | None:intergenic |
| CACTGCTGTGTTGCGTAGTC+AGG | 0.352372 | 3_4:-81787634 | Msa0527410:three_prime_UTR |
| ATGAGGAAGGGAGGGAAGAA+GGG | 0.354112 | 3_4:+81793492 | None:intergenic |
| ACTATGCCACACTTCAAATA+TGG | 0.358238 | 3_4:+81788004 | None:intergenic |
| TAAGGGCCTACCTTGCTTCC+AGG | 0.358343 | 3_4:-81789602 | Msa0527410:intron |
| AGGAAGGGAGGGAAGAAGGG+AGG | 0.362461 | 3_4:+81793495 | None:intergenic |
| AAAACTCCTTTGTCTGCAAA+AGG | 0.367786 | 3_4:-81791986 | Msa0527410:CDS |
| TGGTGATATCTCTTTGCTTA+AGG | 0.368188 | 3_4:-81791203 | Msa0527410:intron |
| TGAATGATAATTGAATAATA+AGG | 0.369374 | 3_4:+81787883 | None:intergenic |
| CGACGATCAGTATTTGTATC+TGG | 0.377681 | 3_4:-81788039 | Msa0527410:three_prime_UTR |
| GAAGCAAGAGGTAAGCTTGC+GGG | 0.386616 | 3_4:+81789014 | None:intergenic |
| CTGATAAGGTAGACATCAAT+TGG | 0.387115 | 3_4:+81789236 | None:intergenic |
| TTCATTACATTAGTGTATCC+AGG | 0.390006 | 3_4:+81792019 | None:intergenic |
| ATATCAAGAACAGAATATAT+TGG | 0.392044 | 3_4:-81791378 | Msa0527410:CDS |
| CCAGCAGGAGTGAGCGGAGA+AGG | 0.392492 | 3_4:+81791782 | None:intergenic |
| CCTCAGCACGCTTGAGCAAA+TGG | 0.395797 | 3_4:+81791596 | None:intergenic |
| TCCAGCGTTACCGGACATTA+CGG | 0.398218 | 3_4:+81793353 | None:intergenic |
| TTCCCTAAACTTACTTCCTC+AGG | 0.398706 | 3_4:+81789395 | None:intergenic |
| TGTGTAAGCCTTCGTGCAAT+AGG | 0.398763 | 3_4:+81787759 | None:intergenic |
| AGGGTGCACTGGATATTGTT+AGG | 0.399664 | 3_4:-81787915 | Msa0527410:three_prime_UTR |
| TACCTCTTGCTTCAAGTTCA+GGG | 0.401939 | 3_4:-81789004 | Msa0527410:CDS |
| GTCGGAAGGTCCAGCGTTAC+CGG | 0.403176 | 3_4:+81793344 | None:intergenic |
| AATGTTTCACAAGAGTTTGC+TGG | 0.409766 | 3_4:-81788882 | Msa0527410:CDS |
| AAAATGATCGGAGAGAAATT+GGG | 0.415372 | 3_4:+81793410 | None:intergenic |
| AGTAAATCACCGACTCTCTT+AGG | 0.417798 | 3_4:-81788185 | Msa0527410:three_prime_UTR |
| GTCAGGGACATTCGATCAAC+AGG | 0.420494 | 3_4:-81787617 | Msa0527410:three_prime_UTR |
| TTCTGACCAGCATTTGAGAT+AGG | 0.420653 | 3_4:+81791908 | None:intergenic |
| GGAAGTTGACAACCTTTCTC+TGG | 0.430841 | 3_4:-81789924 | Msa0527410:CDS |
| TAAAGCAGCAGAAACTTTGC+AGG | 0.430868 | 3_4:-81791554 | Msa0527410:intron |
| AAACTCCTTTGTCTGCAAAA+GGG | 0.431635 | 3_4:-81791985 | Msa0527410:CDS |
| GCCGCCGTTGAAGCGTCATC+TGG | 0.433324 | 3_4:-81793286 | Msa0527410:CDS |
| ATCTGTGCTCCGGTCGGCAT+CGG | 0.435761 | 3_4:+81793312 | None:intergenic |
| AATCGAAGTGGAAACGGAAA+TGG | 0.439453 | 3_4:+81793387 | None:intergenic |
| GGAGATATAGAATCATTCTA+AGG | 0.456891 | 3_4:-81789271 | Msa0527410:CDS |
| CTCGAGAGCATTTCAAAGTC+AGG | 0.458107 | 3_4:+81788435 | None:intergenic |
| TGTCGTTATGACAGTTCCTT+AGG | 0.460009 | 3_4:-81791755 | Msa0527410:intron |
| TCCTTTCCACTGCATTCAGC+AGG | 0.460324 | 3_4:+81788951 | None:intergenic |
| GTGACCGAGGAAGATATTAA+GGG | 0.460410 | 3_4:-81789619 | Msa0527410:CDS |
| GCATAACAGCTAATGTTGAT+TGG | 0.461803 | 3_4:-81788479 | Msa0527410:intron |
| GTTATCATCCTCTGTATTGA+GGG | 0.462368 | 3_4:-81788308 | Msa0527410:three_prime_UTR |
| CCTTCTCCGCTCACTCCTGC+TGG | 0.469787 | 3_4:-81791782 | Msa0527410:CDS |
| GCAAGTAGTTATACCTGATA+AGG | 0.470864 | 3_4:+81789222 | None:intergenic |
| ATGTTTCACAAGAGTTTGCT+GGG | 0.474909 | 3_4:-81788881 | Msa0527410:CDS |
| GGAAGGGAGGGAAGAAGGGA+GGG | 0.475986 | 3_4:+81793496 | None:intergenic |
| TGCCGACCGGAGCACAGATT+CGG | 0.476300 | 3_4:-81793308 | Msa0527410:CDS |
| AAGAGAGAAGAAAATGAGGA+AGG | 0.476565 | 3_4:+81793479 | None:intergenic |
| GCTTGAAATCATATAGCAAA+TGG | 0.476786 | 3_4:+81787694 | None:intergenic |
| ATCATTCTAAGGAGCACAAT+GGG | 0.480097 | 3_4:-81789260 | Msa0527410:CDS |
| AGTCCTGGCGATGGAGTTTG+TGG | 0.482085 | 3_4:+81788411 | None:intergenic |
| GGGGAAGGGCAAACAAGTCA+AGG | 0.482335 | 3_4:-81791964 | Msa0527410:CDS |
| AAACTTACTTCCTCAGGATC+AGG | 0.482688 | 3_4:+81789401 | None:intergenic |
| TACTCATCAGTCGGTGCAAA+CGG | 0.485816 | 3_4:+81793243 | None:intergenic |
| AGAAGAAAATGAGGAAGGGA+GGG | 0.485887 | 3_4:+81793484 | None:intergenic |
| GCTGACCCCAAACAACTTCA+AGG | 0.487739 | 3_4:-81787935 | Msa0527410:three_prime_UTR |
| TGAGCAACAAGTGACAGAAA+TGG | 0.489280 | 3_4:-81788976 | Msa0527410:CDS |
| GTCTCTGCTCTTCCAGAGAA+AGG | 0.490737 | 3_4:+81789912 | None:intergenic |
| AGAGAAGAGAGAAGAAAATG+AGG | 0.496530 | 3_4:+81793475 | None:intergenic |
| GAGAAGAAAATGAGGAAGGG+AGG | 0.496878 | 3_4:+81793483 | None:intergenic |
| GATGGTGCTTCCGCAAGTCC+TGG | 0.500096 | 3_4:+81788396 | None:intergenic |
| GGTTATCATCCTCTGTATTG+AGG | 0.501922 | 3_4:-81788309 | Msa0527410:three_prime_UTR |
| AGCCGTTATTGTTAGATCTC+CGG | 0.504106 | 3_4:-81793169 | Msa0527410:intron |
| GTTTCGAAAGCATCTGAGGA+TGG | 0.506163 | 3_4:-81787719 | Msa0527410:three_prime_UTR |
| CCAGCATTTGAGATAGGTGT+TGG | 0.506282 | 3_4:+81791914 | None:intergenic |
| AACTCCTTTGTCTGCAAAAG+GGG | 0.506592 | 3_4:-81791984 | Msa0527410:CDS |
| GCGGAGAATCGAAGTGGAAA+CGG | 0.508363 | 3_4:+81793381 | None:intergenic |
| GGAATTGAATCTTCTACGCC+TGG | 0.513959 | 3_4:-81791235 | Msa0527410:CDS |
| AAGGTCATAAAGCGGAAGAA+TGG | 0.515250 | 3_4:-81792085 | Msa0527410:CDS |
| AAACAACTTCAAGGGTGCAC+TGG | 0.515506 | 3_4:-81787926 | Msa0527410:three_prime_UTR |
| AGAGAGAAGAAAATGAGGAA+GGG | 0.520744 | 3_4:+81793480 | None:intergenic |
| CAGCAGGAGTGAGCGGAGAA+GGG | 0.521252 | 3_4:+81791783 | None:intergenic |
| TGAGAAGAGAGCAGAGCTTG+AGG | 0.521585 | 3_4:+81788921 | None:intergenic |
| CGTGGCTCGCCGATGCCGAC+CGG | 0.525876 | 3_4:-81793321 | Msa0527410:CDS |
| GGCCGAATCTGTGCTCCGGT+CGG | 0.529279 | 3_4:+81793306 | None:intergenic |
| CGGCATCGGCGAGCCACGGT+CGG | 0.533060 | 3_4:+81793326 | None:intergenic |
| AAATGATCGGAGAGAAATTG+GGG | 0.534132 | 3_4:+81793411 | None:intergenic |
| AAGTCAAGGGCATCCAAAGA+AGG | 0.536537 | 3_4:-81791950 | Msa0527410:CDS |
| CGGTCGGCATCGGCGAGCCA+CGG | 0.539391 | 3_4:+81793322 | None:intergenic |
| AACTCCATCGCCAGGACTTG+CGG | 0.541849 | 3_4:-81788406 | Msa0527410:CDS |
| ACCGTAATGTCCGGTAACGC+TGG | 0.543022 | 3_4:-81793354 | Msa0527410:exon |
| AGGCCACAAACTCCATCGCC+AGG | 0.544206 | 3_4:-81788414 | Msa0527410:CDS |
| CACCGGAGATCTAACAATAA+CGG | 0.545488 | 3_4:+81793167 | None:intergenic |
| ATCGGCGAGCCACGGTCGGA+AGG | 0.546657 | 3_4:+81793330 | None:intergenic |
| CTATACTATAGGTGCAAAAG+AGG | 0.547054 | 3_4:-81791453 | Msa0527410:intron |
| AAGCAAGAGGTAAGCTTGCG+GGG | 0.551818 | 3_4:+81789015 | None:intergenic |
| AGCAGGAGTGAGCGGAGAAG+GGG | 0.552395 | 3_4:+81791784 | None:intergenic |
| TTGCTCAAGCGTGCTGAGGA+TGG | 0.554722 | 3_4:-81791592 | Msa0527410:CDS |
| CAAAAGTCAAGTAACAGCCC+TGG | 0.555813 | 3_4:-81792037 | Msa0527410:CDS |
| TATTTGAAGTGTGGCATAGT+GGG | 0.556790 | 3_4:-81788001 | Msa0527410:three_prime_UTR |
| TGCACCCTTGAAGTTGTTTG+GGG | 0.558626 | 3_4:+81787930 | None:intergenic |
| GCTTCCGCAAGTCCTGGCGA+TGG | 0.558700 | 3_4:+81788402 | None:intergenic |
| ATCTTCTACGCCTGGTAATG+TGG | 0.558876 | 3_4:-81791227 | Msa0527410:CDS |
| AGAGACTAGATGATCAGATA+AGG | 0.559999 | 3_4:-81789895 | Msa0527410:intron |
| CGGCGGCCGAATCTGTGCTC+CGG | 0.564361 | 3_4:+81793302 | None:intergenic |
| GTTACCGGACATTACGGTTA+CGG | 0.567648 | 3_4:+81793359 | None:intergenic |
| TCATAACGACAGCTACCAGC+AGG | 0.570121 | 3_4:+81791767 | None:intergenic |
| TTTGTTTCGGATAGATGTGG+AGG | 0.571007 | 3_4:+81793522 | None:intergenic |
| TAGGCCCTTAATATCTTCCT+CGG | 0.571156 | 3_4:+81789615 | None:intergenic |
| CCAACACCTATCTCAAATGC+TGG | 0.572738 | 3_4:-81791914 | Msa0527410:intron |
| TATTAGCCATATTTGAAGTG+TGG | 0.573232 | 3_4:-81788010 | Msa0527410:three_prime_UTR |
| GACCCTGAACTTGAAGCAAG+AGG | 0.573741 | 3_4:+81789002 | None:intergenic |
| GCATTTGAGATAGGTGTTGG+AGG | 0.574157 | 3_4:+81791917 | None:intergenic |
| TAGTAGACATACTAAGCTTG+TGG | 0.576638 | 3_4:-81788149 | Msa0527410:three_prime_UTR |
| TCATTACATTAGTGTATCCA+GGG | 0.578943 | 3_4:+81792020 | None:intergenic |
| ACAGCTAATGTTGATTGGAG+TGG | 0.580563 | 3_4:-81788474 | Msa0527410:intron |
| AACGCCAGATGACGCTTCAA+CGG | 0.580618 | 3_4:+81793282 | None:intergenic |
| AGCATATCTAAGTGGGAACA+AGG | 0.581044 | 3_4:-81787674 | Msa0527410:three_prime_UTR |
| GCACTGGATATTGTTAGGAC+AGG | 0.583065 | 3_4:-81787910 | Msa0527410:three_prime_UTR |
| TTTCGAAAGCATCTGAGGAT+GGG | 0.583104 | 3_4:-81787718 | Msa0527410:three_prime_UTR |
| AAGTTAGCATAACAGATATG+TGG | 0.583522 | 3_4:-81788611 | Msa0527410:CDS |
| AAAGAACTCACCTGGAAGCA+AGG | 0.584852 | 3_4:+81789592 | None:intergenic |
| ATATTTGAAGTGTGGCATAG+TGG | 0.584932 | 3_4:-81788002 | Msa0527410:three_prime_UTR |
| ATATCACCATCCACATTACC+AGG | 0.586810 | 3_4:+81791217 | None:intergenic |
| AAACTATGATACTCATCAGT+CGG | 0.589869 | 3_4:+81793234 | None:intergenic |
| GATTTCAAGCATATCTAAGT+GGG | 0.590275 | 3_4:-81787681 | Msa0527410:three_prime_UTR |
| GCCAGATGACGCTTCAACGG+CGG | 0.590423 | 3_4:+81793285 | None:intergenic |
| TGATTTCAAGCATATCTAAG+TGG | 0.590546 | 3_4:-81787682 | Msa0527410:three_prime_UTR |
| ATACTTACATCAGCATCTGA+AGG | 0.592246 | 3_4:+81788840 | None:intergenic |
| TACTATAGGTGCAAAAGAGG+AGG | 0.592536 | 3_4:-81791450 | Msa0527410:intron |
| AACGCTGGACCTTCCGACCG+TGG | 0.596010 | 3_4:-81793339 | Msa0527410:CDS |
| TTGTTTCGGATAGATGTGGA+GGG | 0.596906 | 3_4:+81793523 | None:intergenic |
| AACGGCTTCATTGACATGAT+CGG | 0.597493 | 3_4:+81793185 | None:intergenic |
| CAGCTACCAGCAGGAGTGAG+CGG | 0.598273 | 3_4:+81791776 | None:intergenic |
| CTCAGGATCAGGAACTTCCA+AGG | 0.601233 | 3_4:+81789412 | None:intergenic |
| TCTACGCCTGGTAATGTGGA+TGG | 0.603037 | 3_4:-81791223 | Msa0527410:CDS |
| TCCGCCGTAACCGTAATGTC+CGG | 0.603732 | 3_4:-81793363 | Msa0527410:exon |
| CTTGGAAGTTCCTGATCCTG+AGG | 0.604439 | 3_4:-81789411 | Msa0527410:CDS |
| AAACGGAAATGGAAAATGAT+CGG | 0.604850 | 3_4:+81793398 | None:intergenic |
| AGCTCCGCATGGAACCACCT+TGG | 0.605657 | 3_4:-81789429 | Msa0527410:CDS |
| AATGGAATGAATGAAAGTGA+AGG | 0.612614 | 3_4:-81792067 | Msa0527410:CDS |
| GATAGTTTCGAAAGCATCTG+AGG | 0.614109 | 3_4:-81787723 | Msa0527410:three_prime_UTR |
| CTGACTTTGAAATGCTCTCG+AGG | 0.615106 | 3_4:-81788434 | Msa0527410:CDS |
| AACTCACCTGGAAGCAAGGT+AGG | 0.616174 | 3_4:+81789596 | None:intergenic |
| TACTTACATCAGCATCTGAA+GGG | 0.619198 | 3_4:+81788841 | None:intergenic |
| ACTGCATGAAATGCAAAGGT+AGG | 0.621047 | 3_4:-81788068 | Msa0527410:three_prime_UTR |
| AGCTAGCCTTGTGAATGTTG+AGG | 0.621713 | 3_4:-81788259 | Msa0527410:three_prime_UTR |
| CTGACCCCAAACAACTTCAA+GGG | 0.624056 | 3_4:-81787934 | Msa0527410:three_prime_UTR |
| TCTCCGCTGTAGTTCGTCAA+CGG | 0.627564 | 3_4:+81789289 | None:intergenic |
| CCATTTGCTCAAGCGTGCTG+AGG | 0.631281 | 3_4:-81791596 | Msa0527410:CDS |
| ATAGCAATCAAAGCTCCGCA+TGG | 0.631816 | 3_4:-81789440 | Msa0527410:CDS |
| CAGCATCCTCAACATTCACA+AGG | 0.636720 | 3_4:+81788253 | None:intergenic |
| AATCATTCTAAGGAGCACAA+TGG | 0.638536 | 3_4:-81789261 | Msa0527410:CDS |
| AGCAAGAGGTAAGCTTGCGG+GGG | 0.640114 | 3_4:+81789016 | None:intergenic |
| GTTTCACAAGAGTTTGCTGG+GGG | 0.641606 | 3_4:-81788879 | Msa0527410:CDS |
| TCGTTTATGCCTAAGAGAGT+CGG | 0.643067 | 3_4:+81788176 | None:intergenic |
| ACTCCTTTGTCTGCAAAAGG+GGG | 0.643497 | 3_4:-81791983 | Msa0527410:CDS |
| TTGGGATGCCTATTGCACGA+AGG | 0.652524 | 3_4:-81787767 | Msa0527410:three_prime_UTR |
| ACCTGCTGAATGCAGTGGAA+AGG | 0.654494 | 3_4:-81788952 | Msa0527410:CDS |
| GCAAGAGGTAAGCTTGCGGG+GGG | 0.656380 | 3_4:+81789017 | None:intergenic |
| GGGAAGGGCAAACAAGTCAA+GGG | 0.657296 | 3_4:-81791963 | Msa0527410:CDS |
| TGAAGCAAGAGGTAAGCTTG+CGG | 0.662777 | 3_4:+81789013 | None:intergenic |
| ACTGCTGTGTTGCGTAGTCA+GGG | 0.668372 | 3_4:-81787633 | Msa0527410:three_prime_UTR |
| ATGGTACCTGCTGAATGCAG+TGG | 0.669987 | 3_4:-81788957 | Msa0527410:CDS |
| TGCTACTGCATGAAATGCAA+AGG | 0.672548 | 3_4:-81788072 | Msa0527410:three_prime_UTR |
| TTAGGGTTAGCTACAGTCGA+TGG | 0.674010 | 3_4:+81788378 | None:intergenic |
| GTTACGGCGGAGAATCGAAG+TGG | 0.676593 | 3_4:+81793375 | None:intergenic |
| TCATCAGTCGGTGCAAACGG+TGG | 0.676716 | 3_4:+81793246 | None:intergenic |
| AGGCCGTTGACGAACTACAG+CGG | 0.677542 | 3_4:-81789292 | Msa0527410:CDS |
| TTATCATCCTCTGTATTGAG+GGG | 0.677777 | 3_4:-81788307 | Msa0527410:three_prime_UTR |
| GTAGCTTCCCCTCAATACAG+AGG | 0.684688 | 3_4:+81788300 | None:intergenic |
| TGTTTCACAAGAGTTTGCTG+GGG | 0.692916 | 3_4:-81788880 | Msa0527410:CDS |
| TAATGTTGATTGGAGTGGAG+TGG | 0.694763 | 3_4:-81788469 | Msa0527410:CDS |
| AATGATCGGAGAGAAATTGG+GGG | 0.706493 | 3_4:+81793412 | None:intergenic |
| ACTTCCAAGGTGGTTCCATG+CGG | 0.714996 | 3_4:+81789425 | None:intergenic |
| GGTGGTGTAAGGTCATAAAG+CGG | 0.723032 | 3_4:-81792093 | Msa0527410:intron |
| AGGATCAGGAACTTCCAAGG+TGG | 0.735853 | 3_4:+81789415 | None:intergenic |
| ACCGGACATTACGGTTACGG+CGG | 0.740946 | 3_4:+81793362 | None:intergenic |
| TGAATGTTGAGGATGCTGTG+AGG | 0.792058 | 3_4:-81788248 | Msa0527410:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTTTTTAAATTATTAC+CGG | - | chr3_4:81788629-81788648 | Msa0527410:CDS | 10.0% |
| !!! | TAGAAAAAATGTATATATTT+TGG | + | chr3_4:81789833-81789852 | None:intergenic | 10.0% |
| !!! | TTTTTTTAGTATTTAATGAT+TGG | - | chr3_4:81792447-81792466 | Msa0527410:intron | 10.0% |
| !!! | AAAATCTTTTGTATAGAATA+CGG | + | chr3_4:81789630-81789649 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCCTTTTTGAAA+AGG | - | chr3_4:81793181-81793200 | Msa0527410:CDS | 15.0% |
| !! | TGAATGATAATTGAATAATA+AGG | + | chr3_4:81793277-81793296 | None:intergenic | 15.0% |
| !!! | TTTATTTTTGTGGAAATAGT+TGG | - | chr3_4:81788144-81788163 | Msa0527410:three_prime_UTR | 20.0% |
| !! | CAACTTGGTTTAATTAAAAT+TGG | - | chr3_4:81788309-81788328 | Msa0527410:three_prime_UTR | 20.0% |
| !! | TTGGTTTAATTAAAATTGGA+GGG | - | chr3_4:81788313-81788332 | Msa0527410:three_prime_UTR | 20.0% |
| !! | TAGATAAATGGAAAGTTAAT+CGG | + | chr3_4:81789281-81789300 | None:intergenic | 20.0% |
| !! | TTGAACATAACATAGATAAA+TGG | + | chr3_4:81789293-81789312 | None:intergenic | 20.0% |
| !! | TTTAAATTCTCCTATACTAT+AGG | - | chr3_4:81789693-81789712 | Msa0527410:intron | 20.0% |
| !!! | ATATGACATAACTAATGTTT+TGG | - | chr3_4:81789732-81789751 | Msa0527410:intron | 20.0% |
| !! | ATATCAAGAACAGAATATAT+TGG | - | chr3_4:81789779-81789798 | Msa0527410:CDS | 20.0% |
| !! | AAGTCATTCTAATTAATTTC+TGG | + | chr3_4:81791095-81791114 | None:intergenic | 20.0% |
| !! | AATTAATTAGAATGACTTAG+TGG | - | chr3_4:81791097-81791116 | Msa0527410:intron | 20.0% |
| !! | AATGAATCTAAGAACTAAAT+GGG | + | chr3_4:81791428-81791447 | None:intergenic | 20.0% |
| !! | AAATGAATCTAAGAACTAAA+TGG | + | chr3_4:81791429-81791448 | None:intergenic | 20.0% |
| !!! | AATAACAATATTTTTCCTTC+TGG | + | chr3_4:81791468-81791487 | None:intergenic | 20.0% |
| !!! | AACAATGTTGATAATAACAA+TGG | + | chr3_4:81791617-81791636 | None:intergenic | 20.0% |
| !! | TCAAAAATTCCAAAATTAAC+TGG | + | chr3_4:81792069-81792088 | None:intergenic | 20.0% |
| !!! | AGAAAAGCATTAAAACAAAA+AGG | + | chr3_4:81792586-81792605 | None:intergenic | 20.0% |
| !!! | GTTTTACATGCTTTTGATTT+TGG | - | chr3_4:81788173-81788192 | Msa0527410:three_prime_UTR | 25.0% |
| !!! | TGCTTTTGATTTTGGTTTAT+CGG | - | chr3_4:81788181-81788200 | Msa0527410:three_prime_UTR | 25.0% |
| ! | TTAAAATTATTTCCGAACAC+TGG | - | chr3_4:81788277-81788296 | Msa0527410:three_prime_UTR | 25.0% |
| ! | CTTGGTTTAATTAAAATTGG+AGG | - | chr3_4:81788312-81788331 | Msa0527410:three_prime_UTR | 25.0% |
| !! | TTTTTAAATTATTACCGGTG+TGG | - | chr3_4:81788634-81788653 | Msa0527410:CDS | 25.0% |
| !! | TTATGAACTCTTTTCATTTG+TGG | - | chr3_4:81788838-81788857 | Msa0527410:intron | 25.0% |
| !! | TGTATGATTAATTGCTACTT+TGG | - | chr3_4:81788934-81788953 | Msa0527410:CDS | 25.0% |
| ! | CTTATTGTTTATGAACATGT+TGG | - | chr3_4:81789043-81789062 | Msa0527410:CDS | 25.0% |
| ! | AGATAAATGGAAAGTTAATC+GGG | + | chr3_4:81789280-81789299 | None:intergenic | 25.0% |
| ! | TATAGTTTCTTATGACATGT+AGG | - | chr3_4:81789348-81789367 | Msa0527410:intron | 25.0% |
| ! | TACACTAATACATATCTAGA+AGG | + | chr3_4:81789470-81789489 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAGCAGATATAT+TGG | + | chr3_4:81789655-81789674 | None:intergenic | 25.0% |
| ! | AGGAGAATTTAAATTCATGT+AGG | + | chr3_4:81789686-81789705 | None:intergenic | 25.0% |
| ! | ATTGTATAACAATTAGTTCC+AGG | + | chr3_4:81790019-81790038 | None:intergenic | 25.0% |
| ! | TGATAGCATCAATATAAACA+TGG | + | chr3_4:81790142-81790161 | None:intergenic | 25.0% |
| ! | TGATGCTATCAATATTGAAA+AGG | - | chr3_4:81790151-81790170 | Msa0527410:intron | 25.0% |
| !! | TGAAAAGGATTAGTAATGAA+AGG | - | chr3_4:81790166-81790185 | Msa0527410:intron | 25.0% |
| ! | TTACAATATTCAACTAGTTG+TGG | + | chr3_4:81790763-81790782 | None:intergenic | 25.0% |
| ! | TGAATATTGTAACTCAAACT+AGG | - | chr3_4:81790771-81790790 | Msa0527410:intron | 25.0% |
| ! | AATATGTTGTGATAAGGATA+AGG | - | chr3_4:81790902-81790921 | Msa0527410:intron | 25.0% |
| !!! | TTTGTTTTTGCATGTTGATA+AGG | - | chr3_4:81790942-81790961 | Msa0527410:intron | 25.0% |
| !!! | TTGTTTTTGCATGTTGATAA+GGG | - | chr3_4:81790943-81790962 | Msa0527410:intron | 25.0% |
| !! | TAGATATTTGAAACTGAGTT+TGG | - | chr3_4:81790966-81790985 | Msa0527410:intron | 25.0% |
| !! | TATGTATATCAAGTTGTTAG+AGG | - | chr3_4:81791018-81791037 | Msa0527410:intron | 25.0% |
| !! | CTTTTGAACCATTATTAACA+GGG | - | chr3_4:81791346-81791365 | Msa0527410:intron | 25.0% |
| !! | ACCAATTTTCAATTCCTTTT+AGG | - | chr3_4:81791506-81791525 | Msa0527410:intron | 25.0% |
| ! | ACCTAAAAGGAATTGAAAAT+TGG | + | chr3_4:81791510-81791529 | None:intergenic | 25.0% |
| !!! | GTTGATAATAACAATGGAAA+AGG | + | chr3_4:81791611-81791630 | None:intergenic | 25.0% |
| ! | GAGAAATTTGAAGAGATTAA+TGG | - | chr3_4:81792110-81792129 | Msa0527410:intron | 25.0% |
| !!! | TTTGTATTGATTAAACGCTT+CGG | - | chr3_4:81792407-81792426 | Msa0527410:intron | 25.0% |
| ! | AATACTAAAAAAACAACTGC+AGG | + | chr3_4:81792440-81792459 | None:intergenic | 25.0% |
| ! | ATCAAAATCATCTCTGATTA+GGG | + | chr3_4:81792799-81792818 | None:intergenic | 25.0% |
| ! | AATCAAAATCATCTCTGATT+AGG | + | chr3_4:81792800-81792819 | None:intergenic | 25.0% |
| ! | TATCACTAAGTTAGAAAGTA+TGG | - | chr3_4:81792827-81792846 | Msa0527410:intron | 25.0% |
| !! | AATTTTGTTTCGGATAGATG+TGG | + | chr3_4:81787641-81787660 | None:intergenic | 30.0% |
| AAAATGATCGGAGAGAAATT+GGG | + | chr3_4:81787750-81787769 | None:intergenic | 30.0% | |
| AAACGGAAATGGAAAATGAT+CGG | + | chr3_4:81787762-81787781 | None:intergenic | 30.0% | |
| AAACTATGATACTCATCAGT+CGG | + | chr3_4:81787926-81787945 | None:intergenic | 30.0% | |
| ! | TTTCGTTCATTTTGCATCTT+CGG | - | chr3_4:81788062-81788081 | Msa0527410:three_prime_UTR | 30.0% |
| !! | GCTTTGAAATTTCACTTGTA+TGG | - | chr3_4:81788346-81788365 | Msa0527410:three_prime_UTR | 30.0% |
| ! | AACTGTGTCGAAAACATTTT+CGG | - | chr3_4:81788382-81788401 | Msa0527410:CDS | 30.0% |
| ATATGCTTATTCTTGTTAGC+TGG | - | chr3_4:81788457-81788476 | Msa0527410:CDS | 30.0% | |
| AGTTCATTAAGTCTAATGCT+TGG | - | chr3_4:81788512-81788531 | Msa0527410:intron | 30.0% | |
| TGATTATGTGCAAAAATGTG+TGG | - | chr3_4:81788690-81788709 | Msa0527410:intron | 30.0% | |
| ! | TGCAAAAATGTGTGGATTTT+CGG | - | chr3_4:81788698-81788717 | Msa0527410:intron | 30.0% |
| ACATCAATATATCGGTGAAA+TGG | + | chr3_4:81788985-81789004 | None:intergenic | 30.0% | |
| ACACACACACATCAATATAT+CGG | + | chr3_4:81788993-81789012 | None:intergenic | 30.0% | |
| ATTGTTTATGAACATGTTGG+TGG | - | chr3_4:81789046-81789065 | Msa0527410:CDS | 30.0% | |
| AATGGAATGAATGAAAGTGA+AGG | - | chr3_4:81789090-81789109 | Msa0527410:intron | 30.0% | |
| TCATTACATTAGTGTATCCA+GGG | + | chr3_4:81789140-81789159 | None:intergenic | 30.0% | |
| TTCATTACATTAGTGTATCC+AGG | + | chr3_4:81789141-81789160 | None:intergenic | 30.0% | |
| TCATAAGAAACTATAAGCTG+GGG | + | chr3_4:81789343-81789362 | None:intergenic | 30.0% | |
| GTCATAAGAAACTATAAGCT+GGG | + | chr3_4:81789344-81789363 | None:intergenic | 30.0% | |
| TGTCATAAGAAACTATAAGC+TGG | + | chr3_4:81789345-81789364 | None:intergenic | 30.0% | |
| ATTGCTTCCAAAATTACCTA+AGG | + | chr3_4:81789421-81789440 | None:intergenic | 30.0% | |
| TACATATCTAGAAGGTGAAT+GGG | + | chr3_4:81789462-81789481 | None:intergenic | 30.0% | |
| ATACATATCTAGAAGGTGAA+TGG | + | chr3_4:81789463-81789482 | None:intergenic | 30.0% | |
| AACTTATACAAGAACTTCAC+AGG | - | chr3_4:81789517-81789536 | Msa0527410:intron | 30.0% | |
| !! | GACATAACTAATGTTTTGGA+AGG | - | chr3_4:81789736-81789755 | Msa0527410:intron | 30.0% |
| AATTCTTACATCAAACCTTG+TGG | - | chr3_4:81789891-81789910 | Msa0527410:intron | 30.0% | |
| CAGCAAATAGACATTATAGT+TGG | + | chr3_4:81790079-81790098 | None:intergenic | 30.0% | |
| AAAGGATAGTATCAATCTCT+TGG | - | chr3_4:81790184-81790203 | Msa0527410:intron | 30.0% | |
| AAGGATAGTATCAATCTCTT+GGG | - | chr3_4:81790185-81790204 | Msa0527410:intron | 30.0% | |
| TTTACTTAGAAACAATCCCA+GGG | + | chr3_4:81790517-81790536 | None:intergenic | 30.0% | |
| AACATTCTCCTCTAACATAT+GGG | + | chr3_4:81790740-81790759 | None:intergenic | 30.0% | |
| CCAATTAACAACATGTTACA+AGG | + | chr3_4:81791183-81791202 | None:intergenic | 30.0% | |
| CCTTGTAACATGTTGTTAAT+TGG | - | chr3_4:81791180-81791199 | Msa0527410:intron | 30.0% | |
| GATGATCAGATAAGGTTATA+TGG | - | chr3_4:81791270-81791289 | Msa0527410:intron | 30.0% | |
| ! | GGTTGCTTTATATCACAAAA+AGG | - | chr3_4:81791291-81791310 | Msa0527410:intron | 30.0% |
| ! | GCTTTTGAACCATTATTAAC+AGG | - | chr3_4:81791345-81791364 | Msa0527410:intron | 30.0% |
| TTGCATTTCCCTGTTAATAA+TGG | + | chr3_4:81791357-81791376 | None:intergenic | 30.0% | |
| ! | ACAATATTTTTCCTTCTGGA+AGG | + | chr3_4:81791464-81791483 | None:intergenic | 30.0% |
| AATCTCAATAACAGCATGAA+AGG | + | chr3_4:81791647-81791666 | None:intergenic | 30.0% | |
| TTAATGCTTCCATATGCATT+AGG | - | chr3_4:81791845-81791864 | Msa0527410:intron | 30.0% | |
| GGAGATATAGAATCATTCTA+AGG | - | chr3_4:81791886-81791905 | Msa0527410:intron | 30.0% | |
| ! | TGTGTGTGTTACTAATATGT+AGG | + | chr3_4:81791969-81791988 | None:intergenic | 30.0% |
| ! | ATGCATTCTCCAGTTAATTT+TGG | - | chr3_4:81792057-81792076 | Msa0527410:CDS | 30.0% |
| CTCTTCAAATTGACTGAAAA+CGG | + | chr3_4:81792093-81792112 | None:intergenic | 30.0% | |
| ! | TGTAGAATGATGCTGATTAT+TGG | - | chr3_4:81792507-81792526 | Msa0527410:intron | 30.0% |
| AAGTTAGCATAACAGATATG+TGG | - | chr3_4:81792546-81792565 | Msa0527410:intron | 30.0% | |
| ! | TATTAGCCATATTTGAAGTG+TGG | - | chr3_4:81793147-81793166 | Msa0527410:intron | 30.0% |
| AGCAAAATGACAGAAAAAAC+GGG | + | chr3_4:81793364-81793383 | None:intergenic | 30.0% | |
| GAGCAAAATGACAGAAAAAA+CGG | + | chr3_4:81793365-81793384 | None:intergenic | 30.0% | |
| !!! | TGTCATTTTGCTCTATCTTT+GGG | - | chr3_4:81793372-81793391 | Msa0527410:five_prime_UTR | 30.0% |
| GCTTGAAATCATATAGCAAA+TGG | + | chr3_4:81793466-81793485 | None:intergenic | 30.0% | |
| TGATTTCAAGCATATCTAAG+TGG | - | chr3_4:81793475-81793494 | Msa0527410:five_prime_UTR | 30.0% | |
| GATTTCAAGCATATCTAAGT+GGG | - | chr3_4:81793476-81793495 | Msa0527410:five_prime_UTR | 30.0% | |
| AGAGAGAAGAAAATGAGGAA+GGG | + | chr3_4:81787680-81787699 | None:intergenic | 35.0% | |
| AAGAGAGAAGAAAATGAGGA+AGG | + | chr3_4:81787681-81787700 | None:intergenic | 35.0% | |
| AGAGAAGAGAGAAGAAAATG+AGG | + | chr3_4:81787685-81787704 | None:intergenic | 35.0% | |
| AAATGATCGGAGAGAAATTG+GGG | + | chr3_4:81787749-81787768 | None:intergenic | 35.0% | |
| GAAAATGATCGGAGAGAAAT+TGG | + | chr3_4:81787751-81787770 | None:intergenic | 35.0% | |
| TTGAATTCAGATCCAGTGTT+CGG | + | chr3_4:81788292-81788311 | None:intergenic | 35.0% | |
| ! | AAAATTGGAGGGATTTTCTG+AGG | - | chr3_4:81788324-81788343 | Msa0527410:three_prime_UTR | 35.0% |
| CGGATACTATTGTTGTACAT+TGG | - | chr3_4:81788405-81788424 | Msa0527410:CDS | 35.0% | |
| ATTAAGTCTAATGCTTGGCT+CGG | - | chr3_4:81788517-81788536 | Msa0527410:intron | 35.0% | |
| ! | AAAAATGTGTGGATTTTCGG+CGG | - | chr3_4:81788701-81788720 | Msa0527410:intron | 35.0% |
| CGGATAAGATTACTGTACAT+TGG | - | chr3_4:81788721-81788740 | Msa0527410:intron | 35.0% | |
| TTCATAAACTTTGAGTGCCT+TGG | - | chr3_4:81788805-81788824 | Msa0527410:intron | 35.0% | |
| TTCATAAGTGAGCATTACCA+AGG | + | chr3_4:81788825-81788844 | None:intergenic | 35.0% | |
| TTGATGTGTGTGTGTATCTT+TGG | - | chr3_4:81788998-81789017 | Msa0527410:CDS | 35.0% | |
| AAAACTCCTTTGTCTGCAAA+AGG | - | chr3_4:81789171-81789190 | Msa0527410:intron | 35.0% | |
| AAACTCCTTTGTCTGCAAAA+GGG | - | chr3_4:81789172-81789191 | Msa0527410:intron | 35.0% | |
| ! | GACAGTTCCTTAGGTAATTT+TGG | - | chr3_4:81789411-81789430 | Msa0527410:CDS | 35.0% |
| ! | CTCTTTTGCACCTATAGTAT+AGG | + | chr3_4:81789706-81789725 | None:intergenic | 35.0% |
| CTATACTATAGGTGCAAAAG+AGG | - | chr3_4:81789704-81789723 | Msa0527410:intron | 35.0% | |
| !!! | ACTAATGTTTTGGAAGGCAT+TGG | - | chr3_4:81789742-81789761 | Msa0527410:intron | 35.0% |
| TGGTGATATCTCTTTGCTTA+AGG | - | chr3_4:81789954-81789973 | Msa0527410:intron | 35.0% | |
| AATTAGTTCCAGGTGTCAAT+AGG | + | chr3_4:81790009-81790028 | None:intergenic | 35.0% | |
| TGGAAATGAATATACACGAG+CGG | + | chr3_4:81790059-81790078 | None:intergenic | 35.0% | |
| TTGCTGCACTCAACATTTAA+CGG | - | chr3_4:81790093-81790112 | Msa0527410:intron | 35.0% | |
| AGTATCAATCTCTTGGGATA+AGG | - | chr3_4:81790191-81790210 | Msa0527410:intron | 35.0% | |
| GTATCAATCTCTTGGGATAA+GGG | - | chr3_4:81790192-81790211 | Msa0527410:intron | 35.0% | |
| GTTTACTTAGAAACAATCCC+AGG | + | chr3_4:81790518-81790537 | None:intergenic | 35.0% | |
| AACTTGATTACTTTGTGGTC+TGG | + | chr3_4:81790595-81790614 | None:intergenic | 35.0% | |
| GCTCTAACTTGATTACTTTG+TGG | + | chr3_4:81790600-81790619 | None:intergenic | 35.0% | |
| GAACATTCTCCTCTAACATA+TGG | + | chr3_4:81790741-81790760 | None:intergenic | 35.0% | |
| AGCGTCAATATGTTGTGATA+AGG | - | chr3_4:81790896-81790915 | Msa0527410:intron | 35.0% | |
| AGAGACTAGATGATCAGATA+AGG | - | chr3_4:81791262-81791281 | Msa0527410:intron | 35.0% | |
| ACTAAATGGGAGATTACTTC+TGG | + | chr3_4:81791415-81791434 | None:intergenic | 35.0% | |
| !! | ATATTTTTCCTTCTGGAAGG+AGG | + | chr3_4:81791461-81791480 | None:intergenic | 35.0% |
| GTCACAAAAAGGAACCTAAA+AGG | + | chr3_4:81791523-81791542 | None:intergenic | 35.0% | |
| ATCCTGAGGAAGTAAGTTTA+GGG | - | chr3_4:81791760-81791779 | Msa0527410:CDS | 35.0% | |
| TTAGGGAATCAACTGATGAA+AGG | - | chr3_4:81791777-81791796 | Msa0527410:CDS | 35.0% | |
| ! | CTAGTGTTTCTGATACATGA+TGG | - | chr3_4:81791818-81791837 | Msa0527410:intron | 35.0% |
| ! | AATCATTCTAAGGAGCACAA+TGG | - | chr3_4:81791896-81791915 | Msa0527410:intron | 35.0% |
| ! | ATCATTCTAAGGAGCACAAT+GGG | - | chr3_4:81791897-81791916 | Msa0527410:intron | 35.0% |
| CTGATAAGGTAGACATCAAT+TGG | + | chr3_4:81791924-81791943 | None:intergenic | 35.0% | |
| CAATTGATGTCTACCTTATC+AGG | - | chr3_4:81791922-81791941 | Msa0527410:CDS | 35.0% | |
| GCAAGTAGTTATACCTGATA+AGG | + | chr3_4:81791938-81791957 | None:intergenic | 35.0% | |
| AATGTTTCACAAGAGTTTGC+TGG | - | chr3_4:81792275-81792294 | Msa0527410:intron | 35.0% | |
| ! | ATGTTTCACAAGAGTTTGCT+GGG | - | chr3_4:81792276-81792295 | Msa0527410:intron | 35.0% |
| TACTTACATCAGCATCTGAA+GGG | + | chr3_4:81792319-81792338 | None:intergenic | 35.0% | |
| ATACTTACATCAGCATCTGA+AGG | + | chr3_4:81792320-81792339 | None:intergenic | 35.0% | |
| ! | TAAGTATATCACAGCCTTGT+AGG | - | chr3_4:81792333-81792352 | Msa0527410:intron | 35.0% |
| ! | AAGTATATCACAGCCTTGTA+GGG | - | chr3_4:81792334-81792353 | Msa0527410:intron | 35.0% |
| ATCAACATTAGCTGTTATGC+TGG | + | chr3_4:81792678-81792697 | None:intergenic | 35.0% | |
| GCATAACAGCTAATGTTGAT+TGG | - | chr3_4:81792678-81792697 | Msa0527410:intron | 35.0% | |
| GTTATCATCCTCTGTATTGA+GGG | - | chr3_4:81792849-81792868 | Msa0527410:intron | 35.0% | |
| TTATCATCCTCTGTATTGAG+GGG | - | chr3_4:81792850-81792869 | Msa0527410:intron | 35.0% | |
| TAGTAGACATACTAAGCTTG+TGG | - | chr3_4:81793008-81793027 | Msa0527410:intron | 35.0% | |
| ACTATGCCACACTTCAAATA+TGG | + | chr3_4:81793156-81793175 | None:intergenic | 35.0% | |
| ! | ATATTTGAAGTGTGGCATAG+TGG | - | chr3_4:81793155-81793174 | Msa0527410:intron | 35.0% |
| ! | TATTTGAAGTGTGGCATAGT+GGG | - | chr3_4:81793156-81793175 | Msa0527410:intron | 35.0% |
| AGAAAAAACGGGAGTAGTTT+GGG | + | chr3_4:81793353-81793372 | None:intergenic | 35.0% | |
| !!! | CTGTCATTTTGCTCTATCTT+TGG | - | chr3_4:81793371-81793390 | Msa0527410:five_prime_UTR | 35.0% |
| TTGTTTCGGATAGATGTGGA+GGG | + | chr3_4:81787637-81787656 | None:intergenic | 40.0% | |
| TTTGTTTCGGATAGATGTGG+AGG | + | chr3_4:81787638-81787657 | None:intergenic | 40.0% | |
| !! | GAAGGGAGGGAATTTTGTTT+CGG | + | chr3_4:81787651-81787670 | None:intergenic | 40.0% |
| AGAAGAAAATGAGGAAGGGA+GGG | + | chr3_4:81787676-81787695 | None:intergenic | 40.0% | |
| !!! | GGTTTTAGAGAGAGAAAGTG+GGG | + | chr3_4:81787717-81787736 | None:intergenic | 40.0% |
| !!! | GGGTTTTAGAGAGAGAAAGT+GGG | + | chr3_4:81787718-81787737 | None:intergenic | 40.0% |
| !!! | AGGGTTTTAGAGAGAGAAAG+TGG | + | chr3_4:81787719-81787738 | None:intergenic | 40.0% |
| AATGATCGGAGAGAAATTGG+GGG | + | chr3_4:81787748-81787767 | None:intergenic | 40.0% | |
| AATCGAAGTGGAAACGGAAA+TGG | + | chr3_4:81787773-81787792 | None:intergenic | 40.0% | |
| AACGGCTTCATTGACATGAT+CGG | + | chr3_4:81787975-81787994 | None:intergenic | 40.0% | |
| AGCCGTTATTGTTAGATCTC+CGG | - | chr3_4:81787988-81788007 | Msa0527410:three_prime_UTR | 40.0% | |
| CACCGGAGATCTAACAATAA+CGG | + | chr3_4:81787993-81788012 | None:intergenic | 40.0% | |
| GACTAAAACGAAGAACACAC+CGG | + | chr3_4:81788010-81788029 | None:intergenic | 40.0% | |
| CACTGGATCTGAATTCAACT+TGG | - | chr3_4:81788294-81788313 | Msa0527410:three_prime_UTR | 40.0% | |
| ! | TGTGTCGAAAACATTTTCGG+CGG | - | chr3_4:81788385-81788404 | Msa0527410:CDS | 40.0% |
| CGAGTGTGTGTTTGTTTGAT+AGG | - | chr3_4:81788486-81788505 | Msa0527410:intron | 40.0% | |
| !!! | AGCACTGACACTTTTACCAA+AGG | - | chr3_4:81788541-81788560 | Msa0527410:intron | 40.0% |
| !! | GTATCTATGAAGCACTGACA+CGG | + | chr3_4:81788666-81788685 | None:intergenic | 40.0% |
| GTCAGTGCTTCATAGATACT+TGG | - | chr3_4:81788667-81788686 | Msa0527410:intron | 40.0% | |
| !! | ATGAACATGTTGGTGGTGTA+AGG | - | chr3_4:81789053-81789072 | Msa0527410:CDS | 40.0% |
| AAGGTCATAAAGCGGAAGAA+TGG | - | chr3_4:81789072-81789091 | Msa0527410:intron | 40.0% | |
| !!! | CAGACAAAGGAGTTTTGAAG+GGG | + | chr3_4:81789167-81789186 | None:intergenic | 40.0% |
| !!! | GCAGACAAAGGAGTTTTGAA+GGG | + | chr3_4:81789168-81789187 | None:intergenic | 40.0% |
| !! | TGCAGACAAAGGAGTTTTGA+AGG | + | chr3_4:81789169-81789188 | None:intergenic | 40.0% |
| AACTCCTTTGTCTGCAAAAG+GGG | - | chr3_4:81789173-81789192 | Msa0527410:intron | 40.0% | |
| ! | AGGACATGATTTGCCTTCTT+TGG | + | chr3_4:81789223-81789242 | None:intergenic | 40.0% |
| ! | TTCTGACCAGCATTTGAGAT+AGG | + | chr3_4:81789252-81789271 | None:intergenic | 40.0% |
| TGTCGTTATGACAGTTCCTT+AGG | - | chr3_4:81789402-81789421 | Msa0527410:intron | 40.0% | |
| TAAAGCAGCAGAAACTTTGC+AGG | - | chr3_4:81789603-81789622 | Msa0527410:CDS | 40.0% | |
| TACTATAGGTGCAAAAGAGG+AGG | - | chr3_4:81789707-81789726 | Msa0527410:intron | 40.0% | |
| ATATCACCATCCACATTACC+AGG | + | chr3_4:81789943-81789962 | None:intergenic | 40.0% | |
| !! | AGAAGCACTAGAAACTCCAT+AGG | - | chr3_4:81790275-81790294 | Msa0527410:intron | 40.0% |
| CTCAAACTTTCTCTCTCCTA+TGG | + | chr3_4:81790294-81790313 | None:intergenic | 40.0% | |
| TGAGCTAGTGATGGTTATTC+AGG | + | chr3_4:81790351-81790370 | None:intergenic | 40.0% | |
| ! | TCAAGGCTTTTCTGTCTCAA+TGG | - | chr3_4:81790378-81790397 | Msa0527410:intron | 40.0% |
| ! | CAAGGCTTTTCTGTCTCAAT+GGG | - | chr3_4:81790379-81790398 | Msa0527410:intron | 40.0% |
| ! | AAGGCTTTTCTGTCTCAATG+GGG | - | chr3_4:81790380-81790399 | Msa0527410:intron | 40.0% |
| TACATTACCTCCTCAAGCTT+AGG | - | chr3_4:81790470-81790489 | Msa0527410:intron | 40.0% | |
| ACATTACCTCCTCAAGCTTA+GGG | - | chr3_4:81790471-81790490 | Msa0527410:intron | 40.0% | |
| CAGAAACATTGAGTAGACAG+AGG | - | chr3_4:81790537-81790556 | Msa0527410:intron | 40.0% | |
| ATTACTTTGTGGTCTGGCAT+TGG | + | chr3_4:81790589-81790608 | None:intergenic | 40.0% | |
| !! | CCAAGTTTTATCAAGTACCC+TGG | + | chr3_4:81790827-81790846 | None:intergenic | 40.0% |
| ! | CCAGGGTACTTGATAAAACT+TGG | - | chr3_4:81790824-81790843 | Msa0527410:intron | 40.0% |
| ! | TTAGAGGCACATGTATGCAA+AGG | - | chr3_4:81791034-81791053 | Msa0527410:intron | 40.0% |
| GAATTATGTTGTCAGCCTTG+TGG | - | chr3_4:81791141-81791160 | Msa0527410:intron | 40.0% | |
| !! | AGTTCTAAGTCAAAGCCACA+AGG | + | chr3_4:81791159-81791178 | None:intergenic | 40.0% |
| ACATGTTGTTAATTGGCTGC+TGG | - | chr3_4:81791187-81791206 | Msa0527410:intron | 40.0% | |
| TATCTTCCTCGGTCACAAAA+AGG | + | chr3_4:81791534-81791553 | None:intergenic | 40.0% | |
| TGTGACCGAGGAAGATATTA+AGG | - | chr3_4:81791537-81791556 | Msa0527410:intron | 40.0% | |
| GTGACCGAGGAAGATATTAA+GGG | - | chr3_4:81791538-81791557 | Msa0527410:intron | 40.0% | |
| TAGGCCCTTAATATCTTCCT+CGG | + | chr3_4:81791545-81791564 | None:intergenic | 40.0% | |
| GCAAAAACAAAGAACTCACC+TGG | + | chr3_4:81791576-81791595 | None:intergenic | 40.0% | |
| AAACTTACTTCCTCAGGATC+AGG | + | chr3_4:81791759-81791778 | None:intergenic | 40.0% | |
| GATCCTGAGGAAGTAAGTTT+AGG | - | chr3_4:81791759-81791778 | Msa0527410:CDS | 40.0% | |
| TTCCCTAAACTTACTTCCTC+AGG | + | chr3_4:81791765-81791784 | None:intergenic | 40.0% | |
| ! | TTACCTCTTGCTTCAAGTTC+AGG | - | chr3_4:81792152-81792171 | Msa0527410:intron | 40.0% |
| ! | TACCTCTTGCTTCAAGTTCA+GGG | - | chr3_4:81792153-81792172 | Msa0527410:intron | 40.0% |
| TGAGCAACAAGTGACAGAAA+TGG | - | chr3_4:81792181-81792200 | Msa0527410:intron | 40.0% | |
| !! | TGTTTCACAAGAGTTTGCTG+GGG | - | chr3_4:81792277-81792296 | Msa0527410:intron | 40.0% |
| ! | CACTTCATACTGGGGATTTT+GGG | - | chr3_4:81792366-81792385 | Msa0527410:intron | 40.0% |
| TTGATTAAACGCTTCGGATG+TGG | - | chr3_4:81792413-81792432 | Msa0527410:intron | 40.0% | |
| TAGCTGTTATGCTGGAGTTA+AGG | + | chr3_4:81792670-81792689 | None:intergenic | 40.0% | |
| ! | ACAGCTAATGTTGATTGGAG+TGG | - | chr3_4:81792683-81792702 | Msa0527410:intron | 40.0% |
| ! | TAATGTTGATTGGAGTGGAG+TGG | - | chr3_4:81792688-81792707 | Msa0527410:intron | 40.0% |
| GGTTATCATCCTCTGTATTG+AGG | - | chr3_4:81792848-81792867 | Msa0527410:intron | 40.0% | |
| !! | AGTAAATCACCGACTCTCTT+AGG | - | chr3_4:81792972-81792991 | Msa0527410:intron | 40.0% |
| TCGTTTATGCCTAAGAGAGT+CGG | + | chr3_4:81792984-81793003 | None:intergenic | 40.0% | |
| TGCTACTGCATGAAATGCAA+AGG | - | chr3_4:81793085-81793104 | Msa0527410:intron | 40.0% | |
| ACTGCATGAAATGCAAAGGT+AGG | - | chr3_4:81793089-81793108 | Msa0527410:intron | 40.0% | |
| CGACGATCAGTATTTGTATC+TGG | - | chr3_4:81793118-81793137 | Msa0527410:intron | 40.0% | |
| ! | GCAGCTTCTCCTTTTCAAAA+AGG | + | chr3_4:81793193-81793212 | None:intergenic | 40.0% |
| CAGAAAAAACGGGAGTAGTT+TGG | + | chr3_4:81793354-81793373 | None:intergenic | 40.0% | |
| !! | GATAGTTTCGAAAGCATCTG+AGG | - | chr3_4:81793434-81793453 | Msa0527410:five_prime_UTR | 40.0% |
| !! | TTTCGAAAGCATCTGAGGAT+GGG | - | chr3_4:81793439-81793458 | Msa0527410:five_prime_UTR | 40.0% |
| AGCATATCTAAGTGGGAACA+AGG | - | chr3_4:81793483-81793502 | Msa0527410:five_prime_UTR | 40.0% | |
| GAGAAGAAAATGAGGAAGGG+AGG | + | chr3_4:81787677-81787696 | None:intergenic | 45.0% | |
| GAGAAATTGGGGGAGAAGTA+GGG | + | chr3_4:81787738-81787757 | None:intergenic | 45.0% | |
| AGAGAAATTGGGGGAGAAGT+AGG | + | chr3_4:81787739-81787758 | None:intergenic | 45.0% | |
| GTTACCGGACATTACGGTTA+CGG | + | chr3_4:81787801-81787820 | None:intergenic | 45.0% | |
| TACTCATCAGTCGGTGCAAA+CGG | + | chr3_4:81787917-81787936 | None:intergenic | 45.0% | |
| !! | GTTTCGCTGCTGTTGATTCT+AGG | - | chr3_4:81787942-81787961 | Msa0527410:three_prime_UTR | 45.0% |
| !! | ACTTTTACCAAAGGCGTGTC+TGG | - | chr3_4:81788550-81788569 | Msa0527410:intron | 45.0% |
| GGTGGTGTAAGGTCATAAAG+CGG | - | chr3_4:81789064-81789083 | Msa0527410:intron | 45.0% | |
| CAAAAGTCAAGTAACAGCCC+TGG | - | chr3_4:81789120-81789139 | Msa0527410:intron | 45.0% | |
| ACTCCTTTGTCTGCAAAAGG+GGG | - | chr3_4:81789174-81789193 | Msa0527410:intron | 45.0% | |
| TTTGTCTGCAAAAGGGGGAA+GGG | - | chr3_4:81789179-81789198 | Msa0527410:intron | 45.0% | |
| !! | AAGTCAAGGGCATCCAAAGA+AGG | - | chr3_4:81789207-81789226 | Msa0527410:intron | 45.0% |
| !! | GCATTTGAGATAGGTGTTGG+AGG | + | chr3_4:81789243-81789262 | None:intergenic | 45.0% |
| ! | CCAGCATTTGAGATAGGTGT+TGG | + | chr3_4:81789246-81789265 | None:intergenic | 45.0% |
| CCAACACCTATCTCAAATGC+TGG | - | chr3_4:81789243-81789262 | Msa0527410:CDS | 45.0% | |
| CTATAAGCTGGGGTACAACA+AGG | + | chr3_4:81789333-81789352 | None:intergenic | 45.0% | |
| GGAATTGAATCTTCTACGCC+TGG | - | chr3_4:81789922-81789941 | Msa0527410:CDS | 45.0% | |
| ! | ATCTTCTACGCCTGGTAATG+TGG | - | chr3_4:81789930-81789949 | Msa0527410:intron | 45.0% |
| TCTTGAGACCTATTGACACC+TGG | - | chr3_4:81789998-81790017 | Msa0527410:intron | 45.0% | |
| GCACTCAACATTTAACGGCT+CGG | - | chr3_4:81790098-81790117 | Msa0527410:intron | 45.0% | |
| TAACCATCACTAGCTCACTG+AGG | - | chr3_4:81790354-81790373 | Msa0527410:intron | 45.0% | |
| ACGGCTGTCATCAATGTTTG+AGG | - | chr3_4:81790648-81790667 | Msa0527410:intron | 45.0% | |
| AGGTCTTCTGTGATGCTGAT+TGG | + | chr3_4:81790675-81790694 | None:intergenic | 45.0% | |
| CAGAAGACCTGCAAAGTGAA+CGG | - | chr3_4:81790685-81790704 | Msa0527410:intron | 45.0% | |
| AGAAGACCTGCAAAGTGAAC+GGG | - | chr3_4:81790686-81790705 | Msa0527410:intron | 45.0% | |
| AGCAGAAGCCCATATGTTAG+AGG | - | chr3_4:81790729-81790748 | Msa0527410:intron | 45.0% | |
| TAACCCGAAGATCAGTACCA+GGG | - | chr3_4:81790807-81790826 | Msa0527410:intron | 45.0% | |
| !! | AGTACCCTGGTACTGATCTT+CGG | + | chr3_4:81790814-81790833 | None:intergenic | 45.0% |
| GCATGGGGATTATGTGAGAT+GGG | + | chr3_4:81790850-81790869 | None:intergenic | 45.0% | |
| AGCATGGGGATTATGTGAGA+TGG | + | chr3_4:81790851-81790870 | None:intergenic | 45.0% | |
| TTTCCCTCATGTTGGAGCAT+GGG | + | chr3_4:81790866-81790885 | None:intergenic | 45.0% | |
| CCTCTTTCTTTCCCTCATGT+TGG | + | chr3_4:81790874-81790893 | None:intergenic | 45.0% | |
| CCAACATGAGGGAAAGAAAG+AGG | - | chr3_4:81790871-81790890 | Msa0527410:intron | 45.0% | |
| !! | TTGTGGCTTTGTCTTGCAGT+CGG | - | chr3_4:81791212-81791231 | Msa0527410:CDS | 45.0% |
| GGAAGTTGACAACCTTTCTC+TGG | - | chr3_4:81791233-81791252 | Msa0527410:CDS | 45.0% | |
| ! | TAGGTTCCTTTTTGTGACCG+AGG | - | chr3_4:81791525-81791544 | Msa0527410:intron | 45.0% |
| AAAGAACTCACCTGGAAGCA+AGG | + | chr3_4:81791568-81791587 | None:intergenic | 45.0% | |
| ATAGCAATCAAAGCTCCGCA+TGG | - | chr3_4:81791717-81791736 | Msa0527410:intron | 45.0% | |
| TGAAGCAAGAGGTAAGCTTG+CGG | + | chr3_4:81792147-81792166 | None:intergenic | 45.0% | |
| !! | GTTTCACAAGAGTTTGCTGG+GGG | - | chr3_4:81792278-81792297 | Msa0527410:intron | 45.0% |
| AATCCCCAGTATGAAGTGGA+GGG | + | chr3_4:81792364-81792383 | None:intergenic | 45.0% | |
| AAATCCCCAGTATGAAGTGG+AGG | + | chr3_4:81792365-81792384 | None:intergenic | 45.0% | |
| CCAAAATCCCCAGTATGAAG+TGG | + | chr3_4:81792368-81792387 | None:intergenic | 45.0% | |
| ! | CCACTTCATACTGGGGATTT+TGG | - | chr3_4:81792365-81792384 | Msa0527410:intron | 45.0% |
| !! | CTCGAGAGCATTTCAAAGTC+AGG | + | chr3_4:81792725-81792744 | None:intergenic | 45.0% |
| !! | CTGACTTTGAAATGCTCTCG+AGG | - | chr3_4:81792723-81792742 | Msa0527410:intron | 45.0% |
| !! | TTAGGGTTAGCTACAGTCGA+TGG | + | chr3_4:81792782-81792801 | None:intergenic | 45.0% |
| !! | AGCTAGCCTTGTGAATGTTG+AGG | - | chr3_4:81792898-81792917 | Msa0527410:intron | 45.0% |
| CAGCATCCTCAACATTCACA+AGG | + | chr3_4:81792907-81792926 | None:intergenic | 45.0% | |
| TGAATGTTGAGGATGCTGTG+AGG | - | chr3_4:81792909-81792928 | Msa0527410:intron | 45.0% | |
| CTGACCCCAAACAACTTCAA+GGG | - | chr3_4:81793223-81793242 | Msa0527410:CDS | 45.0% | |
| TGCACCCTTGAAGTTGTTTG+GGG | + | chr3_4:81793230-81793249 | None:intergenic | 45.0% | |
| GTGCACCCTTGAAGTTGTTT+GGG | + | chr3_4:81793231-81793250 | None:intergenic | 45.0% | |
| AGTGCACCCTTGAAGTTGTT+TGG | + | chr3_4:81793232-81793251 | None:intergenic | 45.0% | |
| ! | AAACAACTTCAAGGGTGCAC+TGG | - | chr3_4:81793231-81793250 | Msa0527410:CDS | 45.0% |
| AGGGTGCACTGGATATTGTT+AGG | - | chr3_4:81793242-81793261 | Msa0527410:CDS | 45.0% | |
| GCACTGGATATTGTTAGGAC+AGG | - | chr3_4:81793247-81793266 | Msa0527410:CDS | 45.0% | |
| TGTGTAAGCCTTCGTGCAAT+AGG | + | chr3_4:81793401-81793420 | None:intergenic | 45.0% | |
| !! | GTTTCGAAAGCATCTGAGGA+TGG | - | chr3_4:81793438-81793457 | Msa0527410:five_prime_UTR | 45.0% |
| !!! | ATTTTTTATTTTTATTTTTG+TGG | - | chr3_4:81788134-81788153 | Msa0527410:three_prime_UTR | 5.0% |
| ATGAGGAAGGGAGGGAAGAA+GGG | + | chr3_4:81787668-81787687 | None:intergenic | 50.0% | |
| AATGAGGAAGGGAGGGAAGA+AGG | + | chr3_4:81787669-81787688 | None:intergenic | 50.0% | |
| GCGGAGAATCGAAGTGGAAA+CGG | + | chr3_4:81787779-81787798 | None:intergenic | 50.0% | |
| TCCAGCGTTACCGGACATTA+CGG | + | chr3_4:81787807-81787826 | None:intergenic | 50.0% | |
| AACGCCAGATGACGCTTCAA+CGG | + | chr3_4:81787878-81787897 | None:intergenic | 50.0% | |
| TCAAACACCAGACACGCCTT+TGG | + | chr3_4:81788560-81788579 | None:intergenic | 50.0% | |
| ! | CTTCCCCCTTTTGCAGACAA+AGG | + | chr3_4:81789180-81789199 | None:intergenic | 50.0% |
| CTTTGTCTGCAAAAGGGGGA+AGG | - | chr3_4:81789178-81789197 | Msa0527410:intron | 50.0% | |
| GGGAAGGGCAAACAAGTCAA+GGG | - | chr3_4:81789194-81789213 | Msa0527410:intron | 50.0% | |
| TCATAACGACAGCTACCAGC+AGG | + | chr3_4:81789393-81789412 | None:intergenic | 50.0% | |
| TCAAACCTTGTGGCATGCAG+AGG | - | chr3_4:81789901-81789920 | Msa0527410:CDS | 50.0% | |
| CAATTCCTCTGCATGCCACA+AGG | + | chr3_4:81789909-81789928 | None:intergenic | 50.0% | |
| ! | TCTACGCCTGGTAATGTGGA+TGG | - | chr3_4:81789934-81789953 | Msa0527410:intron | 50.0% |
| ! | TTAACGGCTCGGACTCTTGT+TGG | - | chr3_4:81790109-81790128 | Msa0527410:intron | 50.0% |
| TTACCTCCTCAAGCTTAGGG+TGG | - | chr3_4:81790474-81790493 | Msa0527410:intron | 50.0% | |
| TCTGCGGCATGCGTTTGTAT+TGG | + | chr3_4:81790622-81790641 | None:intergenic | 50.0% | |
| TGACAGCCGTTCTACTTCTG+CGG | + | chr3_4:81790638-81790657 | None:intergenic | 50.0% | |
| CTATGACCCGTTCACTTTGC+AGG | + | chr3_4:81790695-81790714 | None:intergenic | 50.0% | |
| CTGCAAAGTGAACGGGTCAT+AGG | - | chr3_4:81790693-81790712 | Msa0527410:intron | 50.0% | |
| !! | GGTACTGATCTTCGGGTTAG+TGG | + | chr3_4:81790806-81790825 | None:intergenic | 50.0% |
| CTAACCCGAAGATCAGTACC+AGG | - | chr3_4:81790806-81790825 | Msa0527410:intron | 50.0% | |
| !! | GTACCCTGGTACTGATCTTC+GGG | + | chr3_4:81790813-81790832 | None:intergenic | 50.0% |
| AATCCCCATGCTCCAACATG+AGG | - | chr3_4:81790859-81790878 | Msa0527410:intron | 50.0% | |
| ATCCCCATGCTCCAACATGA+GGG | - | chr3_4:81790860-81790879 | Msa0527410:intron | 50.0% | |
| TTCCCTCATGTTGGAGCATG+GGG | + | chr3_4:81790865-81790884 | None:intergenic | 50.0% | |
| CTTTCCCTCATGTTGGAGCA+TGG | + | chr3_4:81790867-81790886 | None:intergenic | 50.0% | |
| !! | TTAATTGGCTGCTGGCCTTG+TGG | - | chr3_4:81791195-81791214 | Msa0527410:intron | 50.0% |
| GACTGCAAGACAAAGCCACA+AGG | + | chr3_4:81791213-81791232 | None:intergenic | 50.0% | |
| GTCTCTGCTCTTCCAGAGAA+AGG | + | chr3_4:81791248-81791267 | None:intergenic | 50.0% | |
| TGCTTTGTCCTCCTTCCAGA+AGG | - | chr3_4:81791450-81791469 | Msa0527410:intron | 50.0% | |
| AACTCACCTGGAAGCAAGGT+AGG | + | chr3_4:81791564-81791583 | None:intergenic | 50.0% | |
| ACTTCCAAGGTGGTTCCATG+CGG | + | chr3_4:81791735-81791754 | None:intergenic | 50.0% | |
| AGGATCAGGAACTTCCAAGG+TGG | + | chr3_4:81791745-81791764 | None:intergenic | 50.0% | |
| CTCAGGATCAGGAACTTCCA+AGG | + | chr3_4:81791748-81791767 | None:intergenic | 50.0% | |
| CTTGGAAGTTCCTGATCCTG+AGG | - | chr3_4:81791746-81791765 | Msa0527410:intron | 50.0% | |
| CGTCAACGGCCTAATGCATA+TGG | + | chr3_4:81791857-81791876 | None:intergenic | 50.0% | |
| TCTCCGCTGTAGTTCGTCAA+CGG | + | chr3_4:81791871-81791890 | None:intergenic | 50.0% | |
| AAGCAAGAGGTAAGCTTGCG+GGG | + | chr3_4:81792145-81792164 | None:intergenic | 50.0% | |
| GAAGCAAGAGGTAAGCTTGC+GGG | + | chr3_4:81792146-81792165 | None:intergenic | 50.0% | |
| GACCCTGAACTTGAAGCAAG+AGG | + | chr3_4:81792158-81792177 | None:intergenic | 50.0% | |
| ATGGTACCTGCTGAATGCAG+TGG | - | chr3_4:81792200-81792219 | Msa0527410:intron | 50.0% | |
| ACCTGCTGAATGCAGTGGAA+AGG | - | chr3_4:81792205-81792224 | Msa0527410:intron | 50.0% | |
| TCCTTTCCACTGCATTCAGC+AGG | + | chr3_4:81792209-81792228 | None:intergenic | 50.0% | |
| TGAGAAGAGAGCAGAGCTTG+AGG | + | chr3_4:81792239-81792258 | None:intergenic | 50.0% | |
| TTCCCCCTCCACTTCATACT+GGG | - | chr3_4:81792357-81792376 | Msa0527410:intron | 50.0% | |
| ATCCCCAGTATGAAGTGGAG+GGG | + | chr3_4:81792363-81792382 | None:intergenic | 50.0% | |
| GTAGCTTCCCCTCAATACAG+AGG | + | chr3_4:81792860-81792879 | None:intergenic | 50.0% | |
| GCTGACCCCAAACAACTTCA+AGG | - | chr3_4:81793222-81793241 | Msa0527410:CDS | 50.0% | |
| TTGGGATGCCTATTGCACGA+AGG | - | chr3_4:81793390-81793409 | Msa0527410:five_prime_UTR | 50.0% | |
| ACTGCTGTGTTGCGTAGTCA+GGG | - | chr3_4:81793524-81793543 | Msa0527410:five_prime_UTR | 50.0% | |
| GTTACGGCGGAGAATCGAAG+TGG | + | chr3_4:81787785-81787804 | None:intergenic | 55.0% | |
| TCCGCCGTAACCGTAATGTC+CGG | - | chr3_4:81787794-81787813 | Msa0527410:three_prime_UTR | 55.0% | |
| ACCGGACATTACGGTTACGG+CGG | + | chr3_4:81787798-81787817 | None:intergenic | 55.0% | |
| ACCGTAATGTCCGGTAACGC+TGG | - | chr3_4:81787803-81787822 | Msa0527410:three_prime_UTR | 55.0% | |
| TCATCAGTCGGTGCAAACGG+TGG | + | chr3_4:81787914-81787933 | None:intergenic | 55.0% | |
| GGGGAAGGGCAAACAAGTCA+AGG | - | chr3_4:81789193-81789212 | Msa0527410:intron | 55.0% | |
| CCTCAGCACGCTTGAGCAAA+TGG | + | chr3_4:81789564-81789583 | None:intergenic | 55.0% | |
| CCATTTGCTCAAGCGTGCTG+AGG | - | chr3_4:81789561-81789580 | Msa0527410:intron | 55.0% | |
| TTGCTCAAGCGTGCTGAGGA+TGG | - | chr3_4:81789565-81789584 | Msa0527410:intron | 55.0% | |
| GAGCCTCAGTGAGCTAGTGA+TGG | + | chr3_4:81790360-81790379 | None:intergenic | 55.0% | |
| CACTAGCTCACTGAGGCTCA+AGG | - | chr3_4:81790361-81790380 | Msa0527410:intron | 55.0% | |
| CAACCACCCTAAGCTTGAGG+AGG | + | chr3_4:81790480-81790499 | None:intergenic | 55.0% | |
| CCTCAACCACCCTAAGCTTG+AGG | + | chr3_4:81790483-81790502 | None:intergenic | 55.0% | |
| CCTCAAGCTTAGGGTGGTTG+AGG | - | chr3_4:81790480-81790499 | Msa0527410:intron | 55.0% | |
| GCTTAGGGTGGTTGAGGCAT+AGG | - | chr3_4:81790486-81790505 | Msa0527410:intron | 55.0% | |
| TTGAGGCATAGGCAGTACCC+TGG | - | chr3_4:81790497-81790516 | Msa0527410:intron | 55.0% | |
| TGAGGCATAGGCAGTACCCT+GGG | - | chr3_4:81790498-81790517 | Msa0527410:intron | 55.0% | |
| CGCATGCCGCAGAAGTAGAA+CGG | - | chr3_4:81790629-81790648 | Msa0527410:intron | 55.0% | |
| TAAGGGCCTACCTTGCTTCC+AGG | - | chr3_4:81791555-81791574 | Msa0527410:CDS | 55.0% | |
| AGGCCGTTGACGAACTACAG+CGG | - | chr3_4:81791865-81791884 | Msa0527410:intron | 55.0% | |
| AGCAAGAGGTAAGCTTGCGG+GGG | + | chr3_4:81792144-81792163 | None:intergenic | 55.0% | |
| GTTCCCCCTCCACTTCATAC+TGG | - | chr3_4:81792356-81792375 | Msa0527410:intron | 55.0% | |
| TCCCCCTCCACTTCATACTG+GGG | - | chr3_4:81792358-81792377 | Msa0527410:intron | 55.0% | |
| TCCCCAGTATGAAGTGGAGG+GGG | + | chr3_4:81792362-81792381 | None:intergenic | 55.0% | |
| AGTCCTGGCGATGGAGTTTG+TGG | + | chr3_4:81792749-81792768 | None:intergenic | 55.0% | |
| AACTCCATCGCCAGGACTTG+CGG | - | chr3_4:81792751-81792770 | Msa0527410:intron | 55.0% | |
| CACTGCTGTGTTGCGTAGTC+AGG | - | chr3_4:81793523-81793542 | Msa0527410:five_prime_UTR | 55.0% | |
| GGAAGGGAGGGAAGAAGGGA+GGG | + | chr3_4:81787664-81787683 | None:intergenic | 60.0% | |
| AGGAAGGGAGGGAAGAAGGG+AGG | + | chr3_4:81787665-81787684 | None:intergenic | 60.0% | |
| GTCGGAAGGTCCAGCGTTAC+CGG | + | chr3_4:81787816-81787835 | None:intergenic | 60.0% | |
| ATCTGTGCTCCGGTCGGCAT+CGG | + | chr3_4:81787848-81787867 | None:intergenic | 60.0% | |
| TGCCGACCGGAGCACAGATT+CGG | - | chr3_4:81787849-81787868 | Msa0527410:three_prime_UTR | 60.0% | |
| GCCAGATGACGCTTCAACGG+CGG | + | chr3_4:81787875-81787894 | None:intergenic | 60.0% | |
| TGACACGGTCACGTCCACAC+CGG | + | chr3_4:81788651-81788670 | None:intergenic | 60.0% | |
| AGCAGGAGTGAGCGGAGAAG+GGG | + | chr3_4:81789376-81789395 | None:intergenic | 60.0% | |
| CAGCAGGAGTGAGCGGAGAA+GGG | + | chr3_4:81789377-81789396 | None:intergenic | 60.0% | |
| CAGCTACCAGCAGGAGTGAG+CGG | + | chr3_4:81789384-81789403 | None:intergenic | 60.0% | |
| AGCTCCGCATGGAACCACCT+TGG | - | chr3_4:81791728-81791747 | Msa0527410:intron | 60.0% | |
| GCAAGAGGTAAGCTTGCGGG+GGG | + | chr3_4:81792143-81792162 | None:intergenic | 60.0% | |
| AGTGGAGGGGGAACCCTACA+AGG | + | chr3_4:81792350-81792369 | None:intergenic | 60.0% | |
| AGGCCACAAACTCCATCGCC+AGG | - | chr3_4:81792743-81792762 | Msa0527410:intron | 60.0% | |
| GATGGTGCTTCCGCAAGTCC+TGG | + | chr3_4:81792764-81792783 | None:intergenic | 60.0% | |
| AACGCTGGACCTTCCGACCG+TGG | - | chr3_4:81787818-81787837 | Msa0527410:three_prime_UTR | 65.0% | |
| GGCCGAATCTGTGCTCCGGT+CGG | + | chr3_4:81787854-81787873 | None:intergenic | 65.0% | |
| ! | GCCGCCGTTGAAGCGTCATC+TGG | - | chr3_4:81787871-81787890 | Msa0527410:three_prime_UTR | 65.0% |
| CCAGCAGGAGTGAGCGGAGA+AGG | + | chr3_4:81789378-81789397 | None:intergenic | 65.0% | |
| CCTTCTCCGCTCACTCCTGC+TGG | - | chr3_4:81789375-81789394 | Msa0527410:intron | 65.0% | |
| GCTTCCGCAAGTCCTGGCGA+TGG | + | chr3_4:81792758-81792777 | None:intergenic | 65.0% | |
| ATCGGCGAGCCACGGTCGGA+AGG | + | chr3_4:81787830-81787849 | None:intergenic | 70.0% | |
| CGGCGGCCGAATCTGTGCTC+CGG | + | chr3_4:81787858-81787877 | None:intergenic | 70.0% | |
| !! | CGGCATCGGCGAGCCACGGT+CGG | + | chr3_4:81787834-81787853 | None:intergenic | 75.0% |
| !! | CGGTCGGCATCGGCGAGCCA+CGG | + | chr3_4:81787838-81787857 | None:intergenic | 75.0% |
| CGTGGCTCGCCGATGCCGAC+CGG | - | chr3_4:81787836-81787855 | Msa0527410:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 81787617 | 81793562 | 81787617 | ID=Msa0527410;Name=Msa0527410 |
| chr3_4 | mRNA | 81787617 | 81793562 | 81787617 | ID=Msa0527410-mRNA-1;Parent=Msa0527410;Name=Msa0527410-mRNA-1;_AED=0.16;_eAED=0.16;_QI=192|1|1|1|1|1|14|751|464 |
| chr3_4 | exon | 81787617 | 81788492 | 81787617 | ID=Msa0527410-mRNA-1:exon:24735;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81788601 | 81788667 | 81788601 | ID=Msa0527410-mRNA-1:exon:24734;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81788848 | 81789079 | 81788848 | ID=Msa0527410-mRNA-1:exon:24733;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81789236 | 81789312 | 81789236 | ID=Msa0527410-mRNA-1:exon:24732;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81789409 | 81789474 | 81789409 | ID=Msa0527410-mRNA-1:exon:24731;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81789603 | 81789651 | 81789603 | ID=Msa0527410-mRNA-1:exon:24730;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81789762 | 81789812 | 81789762 | ID=Msa0527410-mRNA-1:exon:24729;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81789896 | 81789948 | 81789896 | ID=Msa0527410-mRNA-1:exon:24728;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81791204 | 81791258 | 81791204 | ID=Msa0527410-mRNA-1:exon:24727;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81791376 | 81791464 | 81791376 | ID=Msa0527410-mRNA-1:exon:24726;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81791555 | 81791640 | 81791555 | ID=Msa0527410-mRNA-1:exon:24725;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81791756 | 81791809 | 81791756 | ID=Msa0527410-mRNA-1:exon:24724;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81791915 | 81792104 | 81791915 | ID=Msa0527410-mRNA-1:exon:24723;Parent=Msa0527410-mRNA-1 |
| chr3_4 | exon | 81793170 | 81793562 | 81793170 | ID=Msa0527410-mRNA-1:exon:24722;Parent=Msa0527410-mRNA-1 |
| chr3_4 | five_prime_UTR | 81793371 | 81793562 | 81793371 | ID=Msa0527410-mRNA-1:five_prime_utr;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81793170 | 81793370 | 81793170 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81791915 | 81792104 | 81791915 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81791756 | 81791809 | 81791756 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81791555 | 81791640 | 81791555 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81791376 | 81791464 | 81791376 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81791204 | 81791258 | 81791204 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81789896 | 81789948 | 81789896 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81789762 | 81789812 | 81789762 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81789603 | 81789651 | 81789603 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81789409 | 81789474 | 81789409 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81789236 | 81789312 | 81789236 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81788848 | 81789079 | 81788848 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81788601 | 81788667 | 81788601 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | CDS | 81788368 | 81788492 | 81788368 | ID=Msa0527410-mRNA-1:cds;Parent=Msa0527410-mRNA-1 |
| chr3_4 | three_prime_UTR | 81787617 | 81788367 | 81787617 | ID=Msa0527410-mRNA-1:three_prime_utr;Parent=Msa0527410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
