Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532380 | XP_003604599.2 | 97.421 | 349 | 7 | 2 | 1 | 347 | 1 | 349 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532380 | sp|O60942|MCE1_HUMAN | 38.068 | 176 | 106 | 2 | 89 | 263 | 4 | 177 | 1.11e-35 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532380 | G7JLW4 | 97.421 | 349 | 7 | 2 | 1 | 347 | 1 | 349 | 0.0 | 708 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379800 | Msa0532380 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
| Msa0467310 | Msa0532380 | 0.837496 | 5.023915e-57 | -8.615850e-47 |
| Msa0474550 | Msa0532380 | 0.835004 | 2.159932e-56 | -8.615850e-47 |
| Msa0532380 | Msa0667260 | 0.818275 | 2.133521e-52 | -8.615850e-47 |
| Msa0532380 | Msa0705500 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532380 | MtrunA17_Chr4g0005821 | 97.421 | 349 | 7 | 2 | 1 | 347 | 1 | 349 | 0.0 | 708 |
| Msa0532380 | MtrunA17_Chr7g0241611 | 77.994 | 359 | 66 | 4 | 1 | 347 | 1 | 358 | 0.0 | 523 |
| Msa0532380 | MtrunA17_Chr7g0259681 | 55.229 | 306 | 124 | 4 | 49 | 352 | 8 | 302 | 1.45e-108 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532380 | AT3G09100.1 | 64.672 | 351 | 111 | 5 | 1 | 346 | 1 | 343 | 2.91e-148 | 428 |
| Msa0532380 | AT3G09100.2 | 64.672 | 351 | 111 | 5 | 1 | 346 | 1 | 343 | 6.67e-146 | 429 |
| Msa0532380 | AT5G01290.1 | 63.848 | 343 | 106 | 4 | 5 | 346 | 1 | 326 | 7.50e-138 | 408 |
| Msa0532380 | AT5G28210.1 | 59.302 | 258 | 88 | 6 | 91 | 345 | 48 | 291 | 6.87e-98 | 304 |
Find 77 sgRNAs with CRISPR-Local
Find 561 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTGTATCATATGATTT+AGG | 0.203328 | 4_1:-6375312 | None:intergenic |
| TATACTTCTTTGACTGCTTT+TGG | 0.245704 | 4_1:-6380238 | None:intergenic |
| TTGCTGTATGATACCTTCTA+AGG | 0.257285 | 4_1:+6379346 | Msa0532380:CDS |
| TATATCCATACCTGCAAATC+AGG | 0.305254 | 4_1:-6380653 | None:intergenic |
| CAATGTTTATAATTTAATTC+AGG | 0.305673 | 4_1:+6382416 | Msa0532380:CDS |
| GTACAATGCATCAATATAAT+CGG | 0.312682 | 4_1:-6380504 | None:intergenic |
| CTGTTATCAAACACTTAGAT+TGG | 0.314711 | 4_1:+6382290 | Msa0532380:CDS |
| TTCAATGACTGCATCTTTCC+TGG | 0.327539 | 4_1:+6379386 | Msa0532380:CDS |
| AGCCTTCTTACTTTCATGTA+TGG | 0.337411 | 4_1:+6382324 | Msa0532380:CDS |
| AAACACTTAGATTGGGTGTT+GGG | 0.348829 | 4_1:+6382298 | Msa0532380:CDS |
| AGTCCCAGGCCCTGATTTGC+AGG | 0.355862 | 4_1:+6380643 | Msa0532380:CDS |
| CCACTTTCTATACGTTCTTC+AGG | 0.357580 | 4_1:-6374145 | None:intergenic |
| AGAGGGTATCAAGCATCTTA+AGG | 0.368989 | 4_1:+6379823 | Msa0532380:CDS |
| TCTTGATTTGCAGCTTGGTC+TGG | 0.383493 | 4_1:+6379748 | Msa0532380:intron |
| TAATCGGGTTTATAGATTCC+TGG | 0.398054 | 4_1:-6380488 | None:intergenic |
| GCCTTCTTACTTTCATGTAT+GGG | 0.400353 | 4_1:+6382325 | Msa0532380:CDS |
| ACATAGCACGCATTAGATAA+TGG | 0.401286 | 4_1:-6380310 | None:intergenic |
| TCACCAAGAGGAACCTTAGA+AGG | 0.423450 | 4_1:-6379359 | None:intergenic |
| TACAATGCATCAATATAATC+GGG | 0.448524 | 4_1:-6380503 | None:intergenic |
| TGTTATCAAACACTTAGATT+GGG | 0.458416 | 4_1:+6382291 | Msa0532380:CDS |
| TATGTCAATGTCTGTTACTC+AGG | 0.458504 | 4_1:+6380328 | Msa0532380:CDS |
| TGATGCACGGGTCTATCATC+TGG | 0.459875 | 4_1:-6375243 | None:intergenic |
| ATACGCACGGGTTGCGCCGT+TGG | 0.463278 | 4_1:+6382378 | Msa0532380:CDS |
| CAGCAAATCTCCTGGCCTGA+TGG | 0.473077 | 4_1:-6379329 | None:intergenic |
| TGATACAAGTAGGCTTCCTC+CGG | 0.479076 | 4_1:+6375323 | Msa0532380:CDS |
| TGTAAATCAGTTCGTCTATG+AGG | 0.480532 | 4_1:+6379997 | Msa0532380:CDS |
| GAGGATGATGATGGAGTCCC+AGG | 0.483153 | 4_1:+6380629 | Msa0532380:CDS |
| TGGTTAGATTGCCCTCCATC+AGG | 0.483908 | 4_1:+6379314 | Msa0532380:CDS |
| CATACCTGCAAATCAGGGCC+TGG | 0.484563 | 4_1:-6380647 | None:intergenic |
| GCGCAACCCGTGCGTATGCA+CGG | 0.490198 | 4_1:-6382372 | None:intergenic |
| ATACCTTCTAAGGTTCCTCT+TGG | 0.491347 | 4_1:+6379356 | Msa0532380:CDS |
| GGAGGACAAACTACCATCTC+AGG | 0.503101 | 4_1:-6380548 | None:intergenic |
| CGCAACCCGTGCGTATGCAC+GGG | 0.503697 | 4_1:-6382371 | None:intergenic |
| ACTCCATCATCATCCTCGTC+AGG | 0.505855 | 4_1:-6380623 | None:intergenic |
| TCATCTGTGAGCTTGTCTCA+TGG | 0.508881 | 4_1:-6382206 | None:intergenic |
| GGTAGTTTGTCCTCCTACTC+CGG | 0.511592 | 4_1:+6380556 | Msa0532380:CDS |
| TACACATGGGCATAATCGTA+CGG | 0.511801 | 4_1:+6380274 | Msa0532380:CDS |
| TCTTCATCTTCCTCCGGTAC+CGG | 0.513155 | 4_1:-6374079 | None:intergenic |
| ATACCTGCAAATCAGGGCCT+GGG | 0.513462 | 4_1:-6380646 | None:intergenic |
| TCTTCTGAACTTGATCTCAA+TGG | 0.513742 | 4_1:+6380590 | Msa0532380:CDS |
| TTTGAATGCATCTCCGGTAC+CGG | 0.521510 | 4_1:+6374066 | Msa0532380:CDS |
| CAAACACTTAGATTGGGTGT+TGG | 0.529106 | 4_1:+6382297 | Msa0532380:CDS |
| AATGGATTTGAATGCATCTC+CGG | 0.531795 | 4_1:+6374060 | Msa0532380:CDS |
| AAAATATCTTCATCTTCCTC+CGG | 0.532283 | 4_1:-6374085 | None:intergenic |
| GTTCCTGACGAGGATGATGA+TGG | 0.533773 | 4_1:+6380620 | Msa0532380:CDS |
| CCTGAAGAACGTATAGAAAG+TGG | 0.534848 | 4_1:+6374145 | Msa0532380:CDS |
| CAAATCTCCTGGCCTGATGG+AGG | 0.537610 | 4_1:-6379326 | None:intergenic |
| ACCCATACATGAAAGTAAGA+AGG | 0.544343 | 4_1:-6382326 | None:intergenic |
| ATGCTTGATGATAGTTGCAA+TGG | 0.555423 | 4_1:+6374042 | Msa0532380:intron |
| TGGAGCTGATATAGCACGCC+GGG | 0.560602 | 4_1:+6374165 | Msa0532380:CDS |
| AGATTGCCCTCCATCAGGCC+AGG | 0.564806 | 4_1:+6379319 | Msa0532380:CDS |
| CTAAATCATATGATACAAGT+AGG | 0.572044 | 4_1:+6375313 | Msa0532380:CDS |
| AACACTTAGATTGGGTGTTG+GGG | 0.573445 | 4_1:+6382299 | Msa0532380:CDS |
| GTATCATACAGCAAATCTCC+TGG | 0.583699 | 4_1:-6379337 | None:intergenic |
| TTGTTCAGATTCAATGCAGG+GGG | 0.583802 | 4_1:+6379948 | Msa0532380:intron |
| AAATCTCCTGGCCTGATGGA+GGG | 0.585045 | 4_1:-6379325 | None:intergenic |
| GCTGTACCCGTGCATACGCA+CGG | 0.585398 | 4_1:+6382365 | Msa0532380:CDS |
| GATTCCTGGAGGGCGTGCAT+CGG | 0.585482 | 4_1:-6380474 | None:intergenic |
| ACACATGGGCATAATCGTAC+GGG | 0.596017 | 4_1:+6380275 | Msa0532380:CDS |
| ATACTTGTTCATTGTACACA+TGG | 0.598629 | 4_1:+6380260 | Msa0532380:CDS |
| ACATACTGTTGAGCATGTAT+CGG | 0.601317 | 4_1:-6374118 | None:intergenic |
| CTGTACCCGTGCATACGCAC+GGG | 0.613484 | 4_1:+6382366 | Msa0532380:CDS |
| TACTTGTTCATTGTACACAT+GGG | 0.617647 | 4_1:+6380261 | Msa0532380:CDS |
| GATACAAGTAGGCTTCCTCC+GGG | 0.618003 | 4_1:+6375324 | Msa0532380:CDS |
| ATATCCATACCTGCAAATCA+GGG | 0.619101 | 4_1:-6380652 | None:intergenic |
| CGGGTTTATAGATTCCTGGA+GGG | 0.626209 | 4_1:-6380484 | None:intergenic |
| GGTGACTGTGAATGATGCAC+GGG | 0.626615 | 4_1:-6375255 | None:intergenic |
| GAATGCATCTCCGGTACCGG+AGG | 0.637362 | 4_1:+6374069 | Msa0532380:CDS |
| TGGTGAAGCAGTTCCTGACG+AGG | 0.650559 | 4_1:+6380610 | Msa0532380:CDS |
| TCATTGAATGATTCACCAAG+AGG | 0.656337 | 4_1:-6379371 | None:intergenic |
| AGGTGACTGTGAATGATGCA+CGG | 0.658854 | 4_1:-6375256 | None:intergenic |
| TTTGTCCTCCTACTCCGGAG+TGG | 0.668870 | 4_1:+6380561 | Msa0532380:CDS |
| TTTGTTCAGATTCAATGCAG+GGG | 0.682706 | 4_1:+6379947 | Msa0532380:intron |
| TCGGGTTTATAGATTCCTGG+AGG | 0.683414 | 4_1:-6380485 | None:intergenic |
| TATAGTTGTTGATCATATCG+AGG | 0.691004 | 4_1:-6375276 | None:intergenic |
| GTGGAGCTGATATAGCACGC+CGG | 0.692109 | 4_1:+6374164 | Msa0532380:CDS |
| TGTCACTGGATAGTATCGAG+AGG | 0.717845 | 4_1:-6379789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAAATTATTTTTTTTA+TGG | + | chr4_1:6375907-6375926 | Msa0532380:intron | 0.0% |
| !!! | ATTTTTTTTTCAAAATTAGT+CGG | - | chr4_1:6374312-6374331 | None:intergenic | 10.0% |
| !!! | TTGATAATATTATGAATTAA+CGG | - | chr4_1:6376059-6376078 | None:intergenic | 10.0% |
| !!! | TTTATTAAAATTAAAGTGTT+TGG | + | chr4_1:6376407-6376426 | Msa0532380:intron | 10.0% |
| !! | TAAATATAAAATGACATAAA+AGG | + | chr4_1:6376455-6376474 | Msa0532380:intron | 10.0% |
| !! | AATAAGAAAATATATTGTAT+AGG | + | chr4_1:6380159-6380178 | Msa0532380:intron | 10.0% |
| !! | TTATTAAAAATATAGATGTT+TGG | + | chr4_1:6381534-6381553 | Msa0532380:intron | 10.0% |
| !!! | TTTAATTTTTTTAAACTAGA+GGG | + | chr4_1:6382025-6382044 | Msa0532380:intron | 10.0% |
| !!! | TCAAGAAATTATTATTGTTT+TGG | + | chr4_1:6373777-6373796 | Msa0532380:intron | 15.0% |
| !!! | ATTATTGTTTTGGTATTTAA+CGG | + | chr4_1:6373787-6373806 | Msa0532380:intron | 15.0% |
| !! | AAATTAGGATTTATGATTAA+AGG | + | chr4_1:6374756-6374775 | Msa0532380:intron | 15.0% |
| !! | TGAAAAATTTAAACTTTACA+TGG | + | chr4_1:6375575-6375594 | Msa0532380:intron | 15.0% |
| !! | GAAAAATTTAAACTTTACAT+GGG | + | chr4_1:6375576-6375595 | Msa0532380:intron | 15.0% |
| !!! | TTTGGTTCAATTAAAAAATT+TGG | - | chr4_1:6376168-6376187 | None:intergenic | 15.0% |
| !! | TAAATTAACAAGGTTAAAAT+TGG | + | chr4_1:6376868-6376887 | Msa0532380:intron | 15.0% |
| !!! | ATATAATTTGTAGATGTTTA+AGG | - | chr4_1:6377069-6377088 | None:intergenic | 15.0% |
| !!! | TTTTAGACAAGAATATTTAA+TGG | - | chr4_1:6377126-6377145 | None:intergenic | 15.0% |
| !! | CACAAAAATAATATATTTGA+TGG | - | chr4_1:6377156-6377175 | None:intergenic | 15.0% |
| !!! | AAAAAAAATCTAAAACAAAC+AGG | + | chr4_1:6377698-6377717 | Msa0532380:intron | 15.0% |
| !!! | TTATTTTATTCTTTTCAAAC+AGG | + | chr4_1:6379290-6379309 | Msa0532380:intron | 15.0% |
| !!! | TATTTTATTCTTTTCAAACA+GGG | + | chr4_1:6379291-6379310 | Msa0532380:intron | 15.0% |
| !!! | AAATGAAGTATTACATTTTT+AGG | - | chr4_1:6379482-6379501 | None:intergenic | 15.0% |
| !! | AAAAATGTAATACTTCATTT+AGG | + | chr4_1:6379482-6379501 | Msa0532380:intron | 15.0% |
| !!! | CCTTTTTATATTTTCTTTTT+TGG | - | chr4_1:6379598-6379617 | None:intergenic | 15.0% |
| !! | CCAAAAAAGAAAATATAAAA+AGG | + | chr4_1:6379595-6379614 | Msa0532380:intron | 15.0% |
| !!! | ATATATTTTCTTATTTACCA+AGG | - | chr4_1:6380154-6380173 | None:intergenic | 15.0% |
| !! | AAACAATAACATTGTTAAAA+AGG | - | chr4_1:6380189-6380208 | None:intergenic | 15.0% |
| !! | AATGTTATTGTTTATATTTC+AGG | + | chr4_1:6380196-6380215 | Msa0532380:intron | 15.0% |
| !! | TTAAAGTAGGTATTATAATT+TGG | + | chr4_1:6380925-6380944 | Msa0532380:intron | 15.0% |
| !! | TAAAGTAGGTATTATAATTT+GGG | + | chr4_1:6380926-6380945 | Msa0532380:intron | 15.0% |
| !! | TTAATAAAATAACCTTTGAT+TGG | - | chr4_1:6381521-6381540 | None:intergenic | 15.0% |
| !!! | GTTTAATTTTTTTAAACTAG+AGG | + | chr4_1:6382024-6382043 | Msa0532380:intron | 15.0% |
| !!! | TTAATTTTTTTAAACTAGAG+GGG | + | chr4_1:6382026-6382045 | Msa0532380:intron | 15.0% |
| !! | ATAATTTAATCATCTATCAA+TGG | + | chr4_1:6382061-6382080 | Msa0532380:intron | 15.0% |
| !! | CAATGTTTATAATTTAATTC+AGG | + | chr4_1:6382416-6382435 | Msa0532380:CDS | 15.0% |
| !! | AAATTCAAAATCAAGAAAAG+CGG | - | chr4_1:6373652-6373671 | None:intergenic | 20.0% |
| !!! | TCTTTTAAAAGTACAAAAAC+AGG | + | chr4_1:6375022-6375041 | Msa0532380:intron | 20.0% |
| !! | AAAAGAATCATTGTTTCAAA+TGG | - | chr4_1:6375077-6375096 | None:intergenic | 20.0% |
| !!! | TTTGAAACAATGATTCTTTT+TGG | + | chr4_1:6375077-6375096 | Msa0532380:intron | 20.0% |
| !! | AATAAATCCACTTCAAATAT+AGG | - | chr4_1:6375452-6375471 | None:intergenic | 20.0% |
| !!! | TTTTTATGGAAATTTTTGAC+CGG | + | chr4_1:6375921-6375940 | Msa0532380:intron | 20.0% |
| !! | CAATAAAACACAAAAAGATT+TGG | - | chr4_1:6376186-6376205 | None:intergenic | 20.0% |
| !!! | TTATTATTCTATGTGCTTTT+AGG | + | chr4_1:6376209-6376228 | Msa0532380:intron | 20.0% |
| !!! | TATTATTCTATGTGCTTTTA+GGG | + | chr4_1:6376210-6376229 | Msa0532380:intron | 20.0% |
| !! | TTAGAAAAATAATATGCTAG+TGG | + | chr4_1:6377301-6377320 | Msa0532380:intron | 20.0% |
| !! | TAGAAAAATAATATGCTAGT+GGG | + | chr4_1:6377302-6377321 | Msa0532380:intron | 20.0% |
| !! | TTAATGAGATTGTTTACATT+AGG | + | chr4_1:6378005-6378024 | Msa0532380:intron | 20.0% |
| !! | TAATGAGATTGTTTACATTA+GGG | + | chr4_1:6378006-6378025 | Msa0532380:intron | 20.0% |
| !! | TATAAAATTGTGTCAAAAGA+CGG | - | chr4_1:6378854-6378873 | None:intergenic | 20.0% |
| !!! | ACAATTTTATAGACATGTTA+GGG | + | chr4_1:6378863-6378882 | Msa0532380:intron | 20.0% |
| !! | AATAGCAAGTTAACTTATTT+AGG | + | chr4_1:6378891-6378910 | Msa0532380:intron | 20.0% |
| !!! | TTAACTTATTTAGGTTTGAT+CGG | + | chr4_1:6378900-6378919 | Msa0532380:intron | 20.0% |
| !!! | TACAACTTTCTTTAAAACTT+TGG | + | chr4_1:6379885-6379904 | Msa0532380:intron | 20.0% |
| !!! | ACATAGTGAATTTTGATTAT+TGG | + | chr4_1:6380675-6380694 | Msa0532380:intron | 20.0% |
| !!! | CTACTTTAAAAGATTTTCAT+AGG | - | chr4_1:6380914-6380933 | None:intergenic | 20.0% |
| !!! | CTATGAAAATCTTTTAAAGT+AGG | + | chr4_1:6380912-6380931 | Msa0532380:intron | 20.0% |
| !! | TTAAAATAGTAGGAAACAAA+AGG | + | chr4_1:6381048-6381067 | Msa0532380:intron | 20.0% |
| !! | GTTTAATAATAGTCTAATCA+TGG | + | chr4_1:6381129-6381148 | Msa0532380:intron | 20.0% |
| !!! | TTTCATATAATCTAAGACTT+TGG | - | chr4_1:6381237-6381256 | None:intergenic | 20.0% |
| !!! | AATTATAAAAATGAGCCTTT+TGG | + | chr4_1:6381759-6381778 | Msa0532380:intron | 20.0% |
| !! | ACTAATACTCATAAAAATTG+TGG | + | chr4_1:6382128-6382147 | Msa0532380:intron | 20.0% |
| ! | TTGATGAATTAGTAGTTGTT+GGG | + | chr4_1:6373985-6374004 | Msa0532380:intron | 25.0% |
| ! | GAAAATTAAGAAATAGTACC+CGG | - | chr4_1:6374186-6374205 | None:intergenic | 25.0% |
| !!! | CAAATTAGACCTTTTTTTAG+AGG | + | chr4_1:6374531-6374550 | Msa0532380:intron | 25.0% |
| !!! | TAACTTGTTGTATTAATGAG+TGG | + | chr4_1:6374680-6374699 | Msa0532380:intron | 25.0% |
| ! | GTGGCATTAAAAGAAAAATT+AGG | + | chr4_1:6374741-6374760 | Msa0532380:intron | 25.0% |
| !!! | AGAACGCTGATTATTTTTTT+TGG | + | chr4_1:6374942-6374961 | Msa0532380:intron | 25.0% |
| !!! | GAACGCTGATTATTTTTTTT+GGG | + | chr4_1:6374943-6374962 | Msa0532380:intron | 25.0% |
| !!! | AACGCTGATTATTTTTTTTG+GGG | + | chr4_1:6374944-6374963 | Msa0532380:intron | 25.0% |
| !! | GTTTCAAATGGTTAATTTTG+AGG | - | chr4_1:6375065-6375084 | None:intergenic | 25.0% |
| !!! | TTTTTGGCTATCAAATAACA+TGG | + | chr4_1:6375093-6375112 | Msa0532380:intron | 25.0% |
| !!! | TTTTGGCTATCAAATAACAT+GGG | + | chr4_1:6375094-6375113 | Msa0532380:intron | 25.0% |
| ! | GTGAACAAAAAGAAAAGTAA+GGG | - | chr4_1:6375154-6375173 | None:intergenic | 25.0% |
| ! | TGTGAACAAAAAGAAAAGTA+AGG | - | chr4_1:6375155-6375174 | None:intergenic | 25.0% |
| ! | TAAAAAAGATACAACAACTC+AGG | - | chr4_1:6375183-6375202 | None:intergenic | 25.0% |
| !!! | TGAGTTGTTGTATCTTTTTT+AGG | + | chr4_1:6375182-6375201 | Msa0532380:intron | 25.0% |
| ! | CTACTTGTATCATATGATTT+AGG | - | chr4_1:6375315-6375334 | None:intergenic | 25.0% |
| ! | CTAAATCATATGATACAAGT+AGG | + | chr4_1:6375313-6375332 | Msa0532380:CDS | 25.0% |
| !! | ATATAGGTTGAAATAGAGAT+AGG | - | chr4_1:6375436-6375455 | None:intergenic | 25.0% |
| ! | ATTTCAACCTATATTTGAAG+TGG | + | chr4_1:6375442-6375461 | Msa0532380:intron | 25.0% |
| ! | ATATTGATGAAAACCAATGA+TGG | + | chr4_1:6375474-6375493 | Msa0532380:intron | 25.0% |
| ! | TATTGATGAAAACCAATGAT+GGG | + | chr4_1:6375475-6375494 | Msa0532380:intron | 25.0% |
| !!! | ATCCAAAAATCTTGATTTGT+GGG | + | chr4_1:6375836-6375855 | Msa0532380:intron | 25.0% |
| !!! | CTTTAAGATTATGTGACATT+CGG | + | chr4_1:6375944-6375963 | Msa0532380:intron | 25.0% |
| !! | TTTAAGATTATGTGACATTC+GGG | + | chr4_1:6375945-6375964 | Msa0532380:intron | 25.0% |
| ! | ATATCTTATGTTCTTTGTAG+TGG | - | chr4_1:6376117-6376136 | None:intergenic | 25.0% |
| ! | GGTTCAATTAAAAAATTTGG+TGG | - | chr4_1:6376165-6376184 | None:intergenic | 25.0% |
| ! | ATAACTGATAAAGCACATTT+AGG | + | chr4_1:6376286-6376305 | Msa0532380:intron | 25.0% |
| ! | AATTATTAGCTATCAGCTAT+CGG | - | chr4_1:6376376-6376395 | None:intergenic | 25.0% |
| ! | ATGAGAGATACATTATTGAA+TGG | - | chr4_1:6377194-6377213 | None:intergenic | 25.0% |
| !! | CTTCACAAAATAACTTTTTG+CGG | + | chr4_1:6377227-6377246 | Msa0532380:intron | 25.0% |
| !! | TTCACAAAATAACTTTTTGC+GGG | + | chr4_1:6377228-6377247 | Msa0532380:intron | 25.0% |
| ! | AGAAAAATAATATGCTAGTG+GGG | + | chr4_1:6377303-6377322 | Msa0532380:intron | 25.0% |
| ! | GAGAGATTAATCATAGTTTA+TGG | + | chr4_1:6377540-6377559 | Msa0532380:intron | 25.0% |
| !!! | GATTTTCTTTAGAGACTTTT+GGG | - | chr4_1:6377658-6377677 | None:intergenic | 25.0% |
| !!! | AGATTTTCTTTAGAGACTTT+TGG | - | chr4_1:6377659-6377678 | None:intergenic | 25.0% |
| ! | ATTCTTCATGAAAATCATAG+AGG | - | chr4_1:6378045-6378064 | None:intergenic | 25.0% |
| !! | TTTTTCTCTATTCAAGTATG+TGG | + | chr4_1:6378171-6378190 | Msa0532380:intron | 25.0% |
| ! | AAATAGCAAGTTAACTGATT+TGG | + | chr4_1:6378805-6378824 | Msa0532380:intron | 25.0% |
| !! | CACAATTTTATAGACATGTT+AGG | + | chr4_1:6378862-6378881 | Msa0532380:intron | 25.0% |
| ! | AATTACTATTGTTGTACATG+TGG | + | chr4_1:6379251-6379270 | Msa0532380:intron | 25.0% |
| ! | ATTACTATTGTTGTACATGT+GGG | + | chr4_1:6379252-6379271 | Msa0532380:intron | 25.0% |
| ! | CAAGTATCAAAATTGCAATT+GGG | - | chr4_1:6379639-6379658 | None:intergenic | 25.0% |
| ! | ACAAGTATCAAAATTGCAAT+TGG | - | chr4_1:6379640-6379659 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTAAATCTGTCAC+TGG | - | chr4_1:6379806-6379825 | None:intergenic | 25.0% |
| ! | AGTGACAGATTTAAAAAAAG+AGG | + | chr4_1:6379805-6379824 | Msa0532380:CDS | 25.0% |
| ! | GTGACAGATTTAAAAAAAGA+GGG | + | chr4_1:6379806-6379825 | Msa0532380:CDS | 25.0% |
| !!! | ATGAGTTGGTGAATAAAATA+TGG | - | chr4_1:6379859-6379878 | None:intergenic | 25.0% |
| ! | AAGTTGTAAAAATCATGAGT+TGG | - | chr4_1:6379873-6379892 | None:intergenic | 25.0% |
| ! | ATTTCTTGTTCTTACATTTG+AGG | + | chr4_1:6379913-6379932 | Msa0532380:intron | 25.0% |
| !! | TGATTTACAGATGAATTTTC+AGG | - | chr4_1:6379986-6380005 | None:intergenic | 25.0% |
| !!! | TTTCATTAGGCTTTTTAAGA+AGG | - | chr4_1:6380127-6380146 | None:intergenic | 25.0% |
| !!! | TTACCAAGGTTTTTTTCATT+AGG | - | chr4_1:6380140-6380159 | None:intergenic | 25.0% |
| ! | TACAATGCATCAATATAATC+GGG | - | chr4_1:6380506-6380525 | None:intergenic | 25.0% |
| ! | GTACAATGCATCAATATAAT+CGG | - | chr4_1:6380507-6380526 | None:intergenic | 25.0% |
| ! | GTTTATATGATTCTCTTGAT+TGG | + | chr4_1:6380765-6380784 | Msa0532380:intron | 25.0% |
| ! | AAAGCCATTTAGTAATCTAA+GGG | + | chr4_1:6380807-6380826 | Msa0532380:intron | 25.0% |
| ! | AAAAATATTCTCAGTTTGAG+TGG | - | chr4_1:6380838-6380857 | None:intergenic | 25.0% |
| !! | TAGGTATTATAATTTGGGTT+GGG | + | chr4_1:6380931-6380950 | Msa0532380:intron | 25.0% |
| !! | AAATGCTTTTAATACTACAC+TGG | + | chr4_1:6381100-6381119 | Msa0532380:intron | 25.0% |
| !!! | TTTAATACTACACTGGTTTA+AGG | + | chr4_1:6381107-6381126 | Msa0532380:intron | 25.0% |
| ! | AAATAGAGCTTATAAAGCTT+AGG | + | chr4_1:6381167-6381186 | Msa0532380:intron | 25.0% |
| ! | TTAGTTAACACAAAACAAAC+TGG | - | chr4_1:6381342-6381361 | None:intergenic | 25.0% |
| ! | ATAAAATAACCTTTGATTGG+AGG | - | chr4_1:6381518-6381537 | None:intergenic | 25.0% |
| !! | ATATAGATGTTTGGTTTCTT+TGG | + | chr4_1:6381543-6381562 | Msa0532380:intron | 25.0% |
| !! | TTTTGATGCAAAATTACTCT+TGG | + | chr4_1:6381670-6381689 | Msa0532380:intron | 25.0% |
| ! | TACATATCAAAGTGATAGTA+AGG | - | chr4_1:6381867-6381886 | None:intergenic | 25.0% |
| !! | AATTTTCTTGCCTTGATTTT+TGG | - | chr4_1:6381946-6381965 | None:intergenic | 25.0% |
| !! | TTTTAATATGAAACTCGCTT+TGG | - | chr4_1:6381972-6381991 | None:intergenic | 25.0% |
| ! | ATTTAATCATCTATCAATGG+AGG | + | chr4_1:6382064-6382083 | Msa0532380:intron | 25.0% |
| ! | TGTTATCAAACACTTAGATT+GGG | + | chr4_1:6382291-6382310 | Msa0532380:CDS | 25.0% |
| AATGATGAAATGAAGGAAAG+AGG | - | chr4_1:6373443-6373462 | None:intergenic | 30.0% | |
| ATTTGCGAATGATGAAATGA+AGG | - | chr4_1:6373450-6373469 | None:intergenic | 30.0% | |
| ! | TTCTTTTCTTTCTCTCTCTA+GGG | + | chr4_1:6373500-6373519 | Msa0532380:intron | 30.0% |
| !!! | TTGTTTTGGTATTTAACGGT+TGG | + | chr4_1:6373791-6373810 | Msa0532380:intron | 30.0% |
| ! | TGTTGATGAAAAGTCTTATC+TGG | + | chr4_1:6373883-6373902 | Msa0532380:intron | 30.0% |
| ! | GAACTTGTTTGAACTTTGAA+TGG | + | chr4_1:6373944-6373963 | Msa0532380:intron | 30.0% |
| ! | GTTGATGAATTAGTAGTTGT+TGG | + | chr4_1:6373984-6374003 | Msa0532380:intron | 30.0% |
| AAAATATCTTCATCTTCCTC+CGG | - | chr4_1:6374088-6374107 | None:intergenic | 30.0% | |
| !!! | TTTCTCTTTTTTACCCCTTT+TGG | + | chr4_1:6374202-6374221 | Msa0532380:intron | 30.0% |
| TTTAGTGTAATCACATGTGT+TGG | + | chr4_1:6374338-6374357 | Msa0532380:intron | 30.0% | |
| ATTTCTTCTATCACAAGTGT+AGG | + | chr4_1:6374388-6374407 | Msa0532380:intron | 30.0% | |
| !! | TTAGTTTGTACTAGTAAGTG+TGG | + | chr4_1:6374478-6374497 | Msa0532380:intron | 30.0% |
| ! | TAGTTTGTACTAGTAAGTGT+GGG | + | chr4_1:6374479-6374498 | Msa0532380:intron | 30.0% |
| !!! | CTTTTTTTAGAGGTGTGATA+GGG | + | chr4_1:6374541-6374560 | Msa0532380:intron | 30.0% |
| GTTCACATATCATGATATAC+AGG | + | chr4_1:6374575-6374594 | Msa0532380:intron | 30.0% | |
| TTGTTGTATTAATGAGTGGA+CGG | + | chr4_1:6374684-6374703 | Msa0532380:intron | 30.0% | |
| ACATGGGTTTCTAAGTAATT+AGG | + | chr4_1:6375110-6375129 | Msa0532380:intron | 30.0% | |
| CATGGGTTTCTAAGTAATTA+GGG | + | chr4_1:6375111-6375130 | Msa0532380:intron | 30.0% | |
| TATAGTTGTTGATCATATCG+AGG | - | chr4_1:6375279-6375298 | None:intergenic | 30.0% | |
| CATAATTTATTGCCCATCAT+TGG | - | chr4_1:6375490-6375509 | None:intergenic | 30.0% | |
| !! | AAAGTAAAGAGCATTGTTGA+AGG | + | chr4_1:6375512-6375531 | Msa0532380:intron | 30.0% |
| !! | AAGTAAAGAGCATTGTTGAA+GGG | + | chr4_1:6375513-6375532 | Msa0532380:intron | 30.0% |
| CATGTAATACATCTTTAGTC+AGG | + | chr4_1:6375603-6375622 | Msa0532380:intron | 30.0% | |
| AAAATAACAGGGTAGTTAGA+AGG | - | chr4_1:6375652-6375671 | None:intergenic | 30.0% | |
| AGGTTTAAGGGAAAATAACA+GGG | - | chr4_1:6375663-6375682 | None:intergenic | 30.0% | |
| TAGGTTTAAGGGAAAATAAC+AGG | - | chr4_1:6375664-6375683 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTCCCTTAAACCT+AGG | + | chr4_1:6375663-6375682 | Msa0532380:intron | 30.0% |
| ! | CTGATTGGATCATAGATTTT+GGG | - | chr4_1:6375730-6375749 | None:intergenic | 30.0% |
| ! | ACTGATTGGATCATAGATTT+TGG | - | chr4_1:6375731-6375750 | None:intergenic | 30.0% |
| !!! | ATCGCTCATTTTTTACTGAT+TGG | - | chr4_1:6375745-6375764 | None:intergenic | 30.0% |
| ! | GATCCAAAAATCTTGATTTG+TGG | + | chr4_1:6375835-6375854 | Msa0532380:intron | 30.0% |
| !! | TCCAAAAATCTTGATTTGTG+GGG | + | chr4_1:6375837-6375856 | Msa0532380:intron | 30.0% |
| ATGTCACATAATCTTAAAGC+CGG | - | chr4_1:6375943-6375962 | None:intergenic | 30.0% | |
| GATATAGATGCCAATGTTAA+AGG | + | chr4_1:6376132-6376151 | Msa0532380:intron | 30.0% | |
| TGAATAGCTTATAAGCTTGT+TGG | - | chr4_1:6377007-6377026 | None:intergenic | 30.0% | |
| ! | TCACAAAATAACTTTTTGCG+GGG | + | chr4_1:6377229-6377248 | Msa0532380:intron | 30.0% |
| !! | GGTCAACACTTCATTTTTAA+TGG | + | chr4_1:6377250-6377269 | Msa0532380:intron | 30.0% |
| GAAAAATAATATGCTAGTGG+GGG | + | chr4_1:6377304-6377323 | Msa0532380:intron | 30.0% | |
| TAGTTGAATCGTGCAAAAAA+TGG | + | chr4_1:6377805-6377824 | Msa0532380:intron | 30.0% | |
| GAAATGGTAATCATCTTCAA+TGG | - | chr4_1:6377869-6377888 | None:intergenic | 30.0% | |
| ! | ATTTCCATGGTTAGTCAAAT+TGG | + | chr4_1:6377917-6377936 | Msa0532380:intron | 30.0% |
| ACAACATTCATTTCAGAAGA+GGG | + | chr4_1:6377967-6377986 | Msa0532380:intron | 30.0% | |
| !!! | GTATCAGTTTTAAACTCTGA+AGG | + | chr4_1:6378122-6378141 | Msa0532380:intron | 30.0% |
| !!! | AGTTTTAAACTCTGAAGGAT+GGG | + | chr4_1:6378127-6378146 | Msa0532380:intron | 30.0% |
| TTTGAAGAACGACAAGATTA+TGG | + | chr4_1:6378212-6378231 | Msa0532380:intron | 30.0% | |
| ACATGCTGTTATATTGAAGA+AGG | - | chr4_1:6378286-6378305 | None:intergenic | 30.0% | |
| ACCAATGACAATTCCAAAAA+GGG | - | chr4_1:6378433-6378452 | None:intergenic | 30.0% | |
| AACCAATGACAATTCCAAAA+AGG | - | chr4_1:6378434-6378453 | None:intergenic | 30.0% | |
| TTTGAATGGTATAGCAGAAT+TGG | + | chr4_1:6378452-6378471 | Msa0532380:intron | 30.0% | |
| ATTTAGTGCCTTAATATGTC+AGG | - | chr4_1:6378789-6378808 | None:intergenic | 30.0% | |
| TTACTATTGTTGTACATGTG+GGG | + | chr4_1:6379253-6379272 | Msa0532380:intron | 30.0% | |
| ! | TTTATTCTTTTCAAACAGGG+TGG | + | chr4_1:6379294-6379313 | Msa0532380:intron | 30.0% |
| ! | TTAAATGAGTATCTTTTGCC+AGG | - | chr4_1:6379407-6379426 | None:intergenic | 30.0% |
| ! | ATACATCAACAGAGAGTTTT+AGG | + | chr4_1:6379434-6379453 | Msa0532380:CDS | 30.0% |
| !!! | CTTTGTCGTTGATTTTTTCT+TGG | + | chr4_1:6379528-6379547 | Msa0532380:intron | 30.0% |
| ! | TTTTTGTTCAGATTCAATGC+AGG | + | chr4_1:6379945-6379964 | Msa0532380:intron | 30.0% |
| ! | TTTTGTTCAGATTCAATGCA+GGG | + | chr4_1:6379946-6379965 | Msa0532380:intron | 30.0% |
| TGCATAGGAAGATTTAATTG+AGG | + | chr4_1:6380092-6380111 | Msa0532380:intron | 30.0% | |
| AGGAAGATTTAATTGAGGAT+AGG | + | chr4_1:6380097-6380116 | Msa0532380:intron | 30.0% | |
| AAGCCTAATGAAAAAAACCT+TGG | + | chr4_1:6380134-6380153 | Msa0532380:intron | 30.0% | |
| ! | TATACTTCTTTGACTGCTTT+TGG | - | chr4_1:6380241-6380260 | None:intergenic | 30.0% |
| ATACTTGTTCATTGTACACA+TGG | + | chr4_1:6380260-6380279 | Msa0532380:CDS | 30.0% | |
| TACTTGTTCATTGTACACAT+GGG | + | chr4_1:6380261-6380280 | Msa0532380:CDS | 30.0% | |
| !!! | AATACTTTTTCCCAACTTGT+AGG | + | chr4_1:6380436-6380455 | Msa0532380:intron | 30.0% |
| TGCATCGGAAAAAATCTTAA+TGG | - | chr4_1:6380462-6380481 | None:intergenic | 30.0% | |
| GAAAGCCATTTAGTAATCTA+AGG | + | chr4_1:6380806-6380825 | Msa0532380:intron | 30.0% | |
| GTAGGTATTATAATTTGGGT+TGG | + | chr4_1:6380930-6380949 | Msa0532380:intron | 30.0% | |
| ! | AAACATTTTCTCATCCAATG+TGG | + | chr4_1:6381020-6381039 | Msa0532380:intron | 30.0% |
| ! | AACATTTTCTCATCCAATGT+GGG | + | chr4_1:6381021-6381040 | Msa0532380:intron | 30.0% |
| AAATTCTCACTTCACAAGTT+GGG | + | chr4_1:6381190-6381209 | Msa0532380:intron | 30.0% | |
| ! | TTCACAAGTTGGGTTATATT+GGG | + | chr4_1:6381200-6381219 | Msa0532380:intron | 30.0% |
| ATAATACAATGGTCCATCAA+CGG | - | chr4_1:6381273-6381292 | None:intergenic | 30.0% | |
| TTCATTCGAGGATAATACAA+TGG | - | chr4_1:6381284-6381303 | None:intergenic | 30.0% | |
| ATTGTATTATCCTCGAATGA+AGG | + | chr4_1:6381283-6381302 | Msa0532380:intron | 30.0% | |
| TTGTATTATCCTCGAATGAA+GGG | + | chr4_1:6381284-6381303 | Msa0532380:intron | 30.0% | |
| TGTAACACTTTCATTTCGAA+GGG | - | chr4_1:6381439-6381458 | None:intergenic | 30.0% | |
| TACATTAAAACTGACTAAGC+AGG | - | chr4_1:6381714-6381733 | None:intergenic | 30.0% | |
| GAGTAAAATGTAGCACATAT+TGG | + | chr4_1:6381994-6382013 | Msa0532380:intron | 30.0% | |
| CTGTTATCAAACACTTAGAT+TGG | + | chr4_1:6382290-6382309 | Msa0532380:CDS | 30.0% | |
| ! | CTTCTTTTCTTTCTCTCTCT+AGG | + | chr4_1:6373499-6373518 | Msa0532380:intron | 35.0% |
| TACTTCAGATACTCGTTCTA+CGG | - | chr4_1:6373692-6373711 | None:intergenic | 35.0% | |
| TTTGAACTTTGAATGGTGCA+GGG | + | chr4_1:6373951-6373970 | Msa0532380:intron | 35.0% | |
| ! | ATGCTTGATGATAGTTGCAA+TGG | + | chr4_1:6374042-6374061 | Msa0532380:intron | 35.0% |
| ! | AATGGATTTGAATGCATCTC+CGG | + | chr4_1:6374060-6374079 | Msa0532380:CDS | 35.0% |
| ! | GGAAGATGAAGATATTTTCG+AGG | + | chr4_1:6374090-6374109 | Msa0532380:CDS | 35.0% |
| !! | AGATGAAGATATTTTCGAGG+AGG | + | chr4_1:6374093-6374112 | Msa0532380:CDS | 35.0% |
| ACATACTGTTGAGCATGTAT+CGG | - | chr4_1:6374121-6374140 | None:intergenic | 35.0% | |
| !!! | TTTTACCCCTTTTGGTTTCA+TGG | + | chr4_1:6374210-6374229 | Msa0532380:intron | 35.0% |
| TTGTGATAGAAGAAATGTCC+AGG | - | chr4_1:6374384-6374403 | None:intergenic | 35.0% | |
| TTGGAATAGGAGTAATGTGA+TGG | + | chr4_1:6374423-6374442 | Msa0532380:intron | 35.0% | |
| AATAGGAGTAATGTGATGGT+AGG | + | chr4_1:6374427-6374446 | Msa0532380:intron | 35.0% | |
| GGACTTAAGTTAATCTCACA+TGG | + | chr4_1:6374500-6374519 | Msa0532380:intron | 35.0% | |
| ! | CCTATCACACCTCTAAAAAA+AGG | - | chr4_1:6374543-6374562 | None:intergenic | 35.0% |
| !!! | CCTTTTTTTAGAGGTGTGAT+AGG | + | chr4_1:6374540-6374559 | Msa0532380:intron | 35.0% |
| ATGATATACAGGAACCTATG+CGG | + | chr4_1:6374586-6374605 | Msa0532380:intron | 35.0% | |
| !!! | AAGCTGTTTTGATACTTGCT+TGG | + | chr4_1:6374609-6374628 | Msa0532380:intron | 35.0% |
| ATATCTCATTTCTCTGCAAG+TGG | + | chr4_1:6374722-6374741 | Msa0532380:intron | 35.0% | |
| GATCAAAACCAGTAACTTGA+GGG | - | chr4_1:6374878-6374897 | None:intergenic | 35.0% | |
| TGATCAAAACCAGTAACTTG+AGG | - | chr4_1:6374879-6374898 | None:intergenic | 35.0% | |
| TCAATCAACACACTAAGCAA+TGG | - | chr4_1:6374996-6375015 | None:intergenic | 35.0% | |
| ! | ATCACAATGCTGATTATCAC+TGG | - | chr4_1:6375387-6375406 | None:intergenic | 35.0% |
| TACATGGTTCCTAGGTTTAA+GGG | - | chr4_1:6375675-6375694 | None:intergenic | 35.0% | |
| AGCGATGCAATTTGTAAGAT+TGG | + | chr4_1:6375759-6375778 | Msa0532380:intron | 35.0% | |
| !! | CCAAAAATCTTGATTTGTGG+GGG | + | chr4_1:6375838-6375857 | Msa0532380:intron | 35.0% |
| TAATGTCGCAAAAAACACGT+TGG | + | chr4_1:6376720-6376739 | Msa0532380:intron | 35.0% | |
| AATGTCGCAAAAAACACGTT+GGG | + | chr4_1:6376721-6376740 | Msa0532380:intron | 35.0% | |
| GGATCAAAATGTGATGTGTT+TGG | - | chr4_1:6376986-6377005 | None:intergenic | 35.0% | |
| ! | TAGATGTTTAAGGCTGTGTT+TGG | - | chr4_1:6377059-6377078 | None:intergenic | 35.0% |
| AGATCCACATATCTGGTATT+GGG | - | chr4_1:6377338-6377357 | None:intergenic | 35.0% | |
| TACACCTCATTATCAGACAA+AGG | + | chr4_1:6377381-6377400 | Msa0532380:intron | 35.0% | |
| ACACCTCATTATCAGACAAA+GGG | + | chr4_1:6377382-6377401 | Msa0532380:intron | 35.0% | |
| ! | TTTGGGAAAAGCATAAACCA+TGG | - | chr4_1:6377641-6377660 | None:intergenic | 35.0% |
| GCAATCAATCACAATATCCT+GGG | - | chr4_1:6377724-6377743 | None:intergenic | 35.0% | |
| AGCAATCAATCACAATATCC+TGG | - | chr4_1:6377725-6377744 | None:intergenic | 35.0% | |
| CTCTTAATGCAAGTCAATCA+GGG | - | chr4_1:6377779-6377798 | None:intergenic | 35.0% | |
| TCTCTTAATGCAAGTCAATC+AGG | - | chr4_1:6377780-6377799 | None:intergenic | 35.0% | |
| TGGTTTCATTACAACTGTTC+TGG | - | chr4_1:6377849-6377868 | None:intergenic | 35.0% | |
| TTGACTAACCATGGAAATTG+CGG | - | chr4_1:6377915-6377934 | None:intergenic | 35.0% | |
| GACAACATTCATTTCAGAAG+AGG | + | chr4_1:6377966-6377985 | Msa0532380:intron | 35.0% | |
| TGTTTACATTAGGGACATCA+TGG | + | chr4_1:6378015-6378034 | Msa0532380:intron | 35.0% | |
| ACAGATTGTCGAGTTTATCA+AGG | + | chr4_1:6378088-6378107 | Msa0532380:intron | 35.0% | |
| !!! | CAGTTTTAAACTCTGAAGGA+TGG | + | chr4_1:6378126-6378145 | Msa0532380:intron | 35.0% |
| AAGAACGACAAGATTATGGA+TGG | + | chr4_1:6378216-6378235 | Msa0532380:intron | 35.0% | |
| TATATTGAAGAAGGATCCAC+AGG | - | chr4_1:6378277-6378296 | None:intergenic | 35.0% | |
| ATCAATAGATTGCCAAAGCA+AGG | + | chr4_1:6378332-6378351 | Msa0532380:intron | 35.0% | |
| GACAAAGTAATGATAGAGTG+AGG | - | chr4_1:6378373-6378392 | None:intergenic | 35.0% | |
| ATCATTACTTTGTCCTCAGA+TGG | + | chr4_1:6378379-6378398 | Msa0532380:intron | 35.0% | |
| ! | TTTTTCTTGTACTCCATCTG+AGG | - | chr4_1:6378395-6378414 | None:intergenic | 35.0% |
| TCAGATGGAGTACAAGAAAA+AGG | + | chr4_1:6378394-6378413 | Msa0532380:intron | 35.0% | |
| ! | CAATTTAATCACCCCCTTTT+TGG | + | chr4_1:6378417-6378436 | Msa0532380:intron | 35.0% |
| CAATGACAATTCCAAAAAGG+GGG | - | chr4_1:6378431-6378450 | None:intergenic | 35.0% | |
| CCAATGACAATTCCAAAAAG+GGG | - | chr4_1:6378432-6378451 | None:intergenic | 35.0% | |
| !! | GGAATTGTCATTGGTTTGAA+TGG | + | chr4_1:6378438-6378457 | Msa0532380:intron | 35.0% |
| TATAGCAGAATTGGAAGACA+TGG | + | chr4_1:6378461-6378480 | Msa0532380:intron | 35.0% | |
| ATAGCAGAATTGGAAGACAT+GGG | + | chr4_1:6378462-6378481 | Msa0532380:intron | 35.0% | |
| ATGTAGCAAAAGAATGCAAC+AGG | + | chr4_1:6378490-6378509 | Msa0532380:intron | 35.0% | |
| TTGGTGAAATTGTACCAGAA+AGG | + | chr4_1:6378544-6378563 | Msa0532380:intron | 35.0% | |
| AGTCACAACCTGACATATTA+AGG | + | chr4_1:6378778-6378797 | Msa0532380:intron | 35.0% | |
| ATACATTTCATAGAACCCCT+GGG | - | chr4_1:6378968-6378987 | None:intergenic | 35.0% | |
| TGAAATGTATGACAAAGTCG+TGG | + | chr4_1:6378978-6378997 | Msa0532380:intron | 35.0% | |
| ATTCATCATCAAACTCGAGA+TGG | - | chr4_1:6379030-6379049 | None:intergenic | 35.0% | |
| TGGTAGTCACTGTTAACAAA+TGG | + | chr4_1:6379145-6379164 | Msa0532380:intron | 35.0% | |
| GGTAGTCACTGTTAACAAAT+GGG | + | chr4_1:6379146-6379165 | Msa0532380:intron | 35.0% | |
| TTGCTGTATGATACCTTCTA+AGG | + | chr4_1:6379346-6379365 | Msa0532380:CDS | 35.0% | |
| TCATTGAATGATTCACCAAG+AGG | - | chr4_1:6379374-6379393 | None:intergenic | 35.0% | |
| AGCAGAGTAATCAGAATGAA+AGG | + | chr4_1:6379564-6379583 | Msa0532380:intron | 35.0% | |
| GCAGAGTAATCAGAATGAAA+GGG | + | chr4_1:6379565-6379584 | Msa0532380:intron | 35.0% | |
| CAGAGTAATCAGAATGAAAG+GGG | + | chr4_1:6379566-6379585 | Msa0532380:intron | 35.0% | |
| !! | TATTCTCTTGATTTGCAGCT+TGG | + | chr4_1:6379743-6379762 | Msa0532380:intron | 35.0% |
| AAGCATCTTAAGGTTTGTAG+TGG | + | chr4_1:6379833-6379852 | Msa0532380:intron | 35.0% | |
| TTTGTTCAGATTCAATGCAG+GGG | + | chr4_1:6379947-6379966 | Msa0532380:intron | 35.0% | |
| TGTAAATCAGTTCGTCTATG+AGG | + | chr4_1:6379997-6380016 | Msa0532380:CDS | 35.0% | |
| ACATAGCACGCATTAGATAA+TGG | - | chr4_1:6380313-6380332 | None:intergenic | 35.0% | |
| TATGTCAATGTCTGTTACTC+AGG | + | chr4_1:6380328-6380347 | Msa0532380:CDS | 35.0% | |
| !!! | GTTTTGGAGTCACCTTATTA+CGG | + | chr4_1:6380354-6380373 | Msa0532380:intron | 35.0% |
| ATCTTAATGGCCTACAAGTT+GGG | - | chr4_1:6380449-6380468 | None:intergenic | 35.0% | |
| AATCTTAATGGCCTACAAGT+TGG | - | chr4_1:6380450-6380469 | None:intergenic | 35.0% | |
| TAATCGGGTTTATAGATTCC+TGG | - | chr4_1:6380491-6380510 | None:intergenic | 35.0% | |
| TCATGAAAAAAAGCCTGAGA+TGG | + | chr4_1:6380535-6380554 | Msa0532380:CDS | 35.0% | |
| TCTTCTGAACTTGATCTCAA+TGG | + | chr4_1:6380590-6380609 | Msa0532380:CDS | 35.0% | |
| ATATCCATACCTGCAAATCA+GGG | - | chr4_1:6380655-6380674 | None:intergenic | 35.0% | |
| TATATCCATACCTGCAAATC+AGG | - | chr4_1:6380656-6380675 | None:intergenic | 35.0% | |
| CATTCATTCAGCGAGAAAAT+AGG | - | chr4_1:6380706-6380725 | None:intergenic | 35.0% | |
| ! | CTATTTTCTCGCTGAATGAA+TGG | + | chr4_1:6380704-6380723 | Msa0532380:intron | 35.0% |
| TGATTCTCTTGATTGGTACT+AGG | + | chr4_1:6380772-6380791 | Msa0532380:intron | 35.0% | |
| !! | CTATTTTAAGAGTCCCACAT+TGG | - | chr4_1:6381037-6381056 | None:intergenic | 35.0% |
| TGTGGGACTCTTAAAATAGT+AGG | + | chr4_1:6381038-6381057 | Msa0532380:intron | 35.0% | |
| TCTAATCATGGCTAGAGATA+TGG | + | chr4_1:6381141-6381160 | Msa0532380:intron | 35.0% | |
| GAAATTCTCACTTCACAAGT+TGG | + | chr4_1:6381189-6381208 | Msa0532380:intron | 35.0% | |
| ! | CTTCACAAGTTGGGTTATAT+TGG | + | chr4_1:6381199-6381218 | Msa0532380:intron | 35.0% |
| AGTGTGAAGCTCATATGTTT+GGG | + | chr4_1:6381311-6381330 | Msa0532380:intron | 35.0% | |
| TAACACAAAACAAACTGGAC+AGG | - | chr4_1:6381337-6381356 | None:intergenic | 35.0% | |
| TTTGTGTTAACTAACTACGC+TGG | + | chr4_1:6381348-6381367 | Msa0532380:intron | 35.0% | |
| !! | TGGTGACTTGTTAGGTAATT+AGG | + | chr4_1:6381368-6381387 | Msa0532380:intron | 35.0% |
| GTGTAACACTTTCATTTCGA+AGG | - | chr4_1:6381440-6381459 | None:intergenic | 35.0% | |
| ATGCATGTTAGTATACACAG+TGG | + | chr4_1:6381472-6381491 | Msa0532380:intron | 35.0% | |
| TGCATGTTAGTATACACAGT+GGG | + | chr4_1:6381473-6381492 | Msa0532380:intron | 35.0% | |
| TGATTGGAGGCAAAATCAAT+TGG | - | chr4_1:6381505-6381524 | None:intergenic | 35.0% | |
| ! | TTGATTTTGCCTCCAATCAA+AGG | + | chr4_1:6381506-6381525 | Msa0532380:intron | 35.0% |
| ! | TATCACTACTAGTCAAGTTG+AGG | - | chr4_1:6381592-6381611 | None:intergenic | 35.0% |
| GTAATCAAATCTCTTTGCAG+TGG | + | chr4_1:6381731-6381750 | Msa0532380:intron | 35.0% | |
| TGTAACATCGAAAGTCCAAA+AGG | - | chr4_1:6381777-6381796 | None:intergenic | 35.0% | |
| AAAATGTAGCACATATTGGC+AGG | + | chr4_1:6381998-6382017 | Msa0532380:intron | 35.0% | |
| CATTTGTCTCAAACTACACA+AGG | - | chr4_1:6382101-6382120 | None:intergenic | 35.0% | |
| ! | CTTGTGTAGTTTGAGACAAA+TGG | + | chr4_1:6382099-6382118 | Msa0532380:intron | 35.0% |
| ! | CAAGTTTAAAACATGTCAGG+TGG | - | chr4_1:6382160-6382179 | None:intergenic | 35.0% |
| !! | CACCTGACATGTTTTAAACT+TGG | + | chr4_1:6382158-6382177 | Msa0532380:intron | 35.0% |
| ! | TGCCAAGTTTAAAACATGTC+AGG | - | chr4_1:6382163-6382182 | None:intergenic | 35.0% |
| ! | ATGACGAACGATGATGTTTT+AGG | + | chr4_1:6382225-6382244 | Msa0532380:CDS | 35.0% |
| ! | TCGAAATGCATTTTGCTGAT+CGG | - | chr4_1:6382265-6382284 | None:intergenic | 35.0% |
| AAACACTTAGATTGGGTGTT+GGG | + | chr4_1:6382298-6382317 | Msa0532380:CDS | 35.0% | |
| AGCCTTCTTACTTTCATGTA+TGG | + | chr4_1:6382324-6382343 | Msa0532380:CDS | 35.0% | |
| GCCTTCTTACTTTCATGTAT+GGG | + | chr4_1:6382325-6382344 | Msa0532380:CDS | 35.0% | |
| ACCCATACATGAAAGTAAGA+AGG | - | chr4_1:6382329-6382348 | None:intergenic | 35.0% | |
| GACAAAAAAATATGCGCCAA+CGG | - | chr4_1:6382397-6382416 | None:intergenic | 35.0% | |
| GAAAGAGGAGAGAGAAATAG+CGG | - | chr4_1:6373428-6373447 | None:intergenic | 40.0% | |
| AGAATCTGTGGATCACGAAA+GGG | - | chr4_1:6373566-6373585 | None:intergenic | 40.0% | |
| ATGGAATTGACGAAGAAACG+AGG | - | chr4_1:6373596-6373615 | None:intergenic | 40.0% | |
| TTTCTTCGTCAATTCCATCG+AGG | + | chr4_1:6373598-6373617 | Msa0532380:intron | 40.0% | |
| ! | GTAGAACGAGTATCTGAAGT+AGG | + | chr4_1:6373691-6373710 | Msa0532380:intron | 40.0% |
| GTTTGAACTTTGAATGGTGC+AGG | + | chr4_1:6373950-6373969 | Msa0532380:intron | 40.0% | |
| TTTGAATGGTGCAGGGAAAA+AGG | + | chr4_1:6373958-6373977 | Msa0532380:intron | 40.0% | |
| !! | GTTGTTGGGTGTTTTTACTG+CGG | + | chr4_1:6373999-6374018 | Msa0532380:intron | 40.0% |
| CCACTTTCTATACGTTCTTC+AGG | - | chr4_1:6374148-6374167 | None:intergenic | 40.0% | |
| CCTGAAGAACGTATAGAAAG+TGG | + | chr4_1:6374145-6374164 | Msa0532380:CDS | 40.0% | |
| ACACTGCCATGAAACCAAAA+GGG | - | chr4_1:6374219-6374238 | None:intergenic | 40.0% | |
| TCCAGTATCAATGTCATGTC+CGG | - | chr4_1:6374280-6374299 | None:intergenic | 40.0% | |
| TGATGGTAGGAGTAATGTGA+TGG | + | chr4_1:6374440-6374459 | Msa0532380:intron | 40.0% | |
| ! | TTTAGAGGTGTGATAGGGAA+AGG | + | chr4_1:6374546-6374565 | Msa0532380:intron | 40.0% |
| TATCAAAACAGCTTCCGCAT+AGG | - | chr4_1:6374603-6374622 | None:intergenic | 40.0% | |
| AAACCAGTAACTTGAGGGAT+GGG | - | chr4_1:6374873-6374892 | None:intergenic | 40.0% | |
| AAAACCAGTAACTTGAGGGA+TGG | - | chr4_1:6374874-6374893 | None:intergenic | 40.0% | |
| ATTGGAAAGAAACCCTTACC+CGG | - | chr4_1:6375345-6375364 | None:intergenic | 40.0% | |
| GGGTTTCTTTCCAATTTCCA+TGG | + | chr4_1:6375350-6375369 | Msa0532380:intron | 40.0% | |
| CTACATGGTTCCTAGGTTTA+AGG | - | chr4_1:6375676-6375695 | None:intergenic | 40.0% | |
| CAGTTAACTACATGGTTCCT+AGG | - | chr4_1:6375683-6375702 | None:intergenic | 40.0% | |
| CTAGGAACCATGTAGTTAAC+TGG | + | chr4_1:6375681-6375700 | Msa0532380:intron | 40.0% | |
| CACATGACCAGTTAACTACA+TGG | - | chr4_1:6375691-6375710 | None:intergenic | 40.0% | |
| ! | CCCCCACAAATCAAGATTTT+TGG | - | chr4_1:6375841-6375860 | None:intergenic | 40.0% |
| TGGTGCTTGTCCTTTAACAT+TGG | - | chr4_1:6376145-6376164 | None:intergenic | 40.0% | |
| AAGCACATTTAGGCTCTGTT+TGG | + | chr4_1:6376296-6376315 | Msa0532380:intron | 40.0% | |
| !! | ACAACTTGCTAGTCACTACA+TGG | - | chr4_1:6376777-6376796 | None:intergenic | 40.0% |
| GCCATATAAACGTAGGAAGT+GGG | + | chr4_1:6376814-6376833 | Msa0532380:intron | 40.0% | |
| ACCCACTTCCTACGTTTATA+TGG | - | chr4_1:6376818-6376837 | None:intergenic | 40.0% | |
| ATATAAACGTAGGAAGTGGG+TGG | + | chr4_1:6376817-6376836 | Msa0532380:intron | 40.0% | |
| ! | CTGTGTTTGGTAACAACAAG+AGG | - | chr4_1:6377046-6377065 | None:intergenic | 40.0% |
| ! | ATCCACATATCTGGTATTGG+GGG | - | chr4_1:6377336-6377355 | None:intergenic | 40.0% |
| GATCCACATATCTGGTATTG+GGG | - | chr4_1:6377337-6377356 | None:intergenic | 40.0% | |
| CAGATCCACATATCTGGTAT+TGG | - | chr4_1:6377339-6377358 | None:intergenic | 40.0% | |
| CTTGAATGCTTTGTCAACCA+TGG | + | chr4_1:6377621-6377640 | Msa0532380:intron | 40.0% | |
| ! | AATCTAAAACAAACAGGCCC+AGG | + | chr4_1:6377704-6377723 | Msa0532380:intron | 40.0% |
| AGCAGCAGAGGATATTGAAA+TGG | - | chr4_1:6377885-6377904 | None:intergenic | 40.0% | |
| GTCTCCAATTTGACTAACCA+TGG | - | chr4_1:6377924-6377943 | None:intergenic | 40.0% | |
| CAAATTGGAGACAAATGTCG+AGG | + | chr4_1:6377932-6377951 | Msa0532380:intron | 40.0% | |
| AAATGTCGAGGAATCTGGTA+AGG | + | chr4_1:6377944-6377963 | Msa0532380:intron | 40.0% | |
| GTGTAGAACAATGATGTGCA+CGG | - | chr4_1:6378255-6378274 | None:intergenic | 40.0% | |
| ACATCATTGTTCTACACCTG+TGG | + | chr4_1:6378258-6378277 | Msa0532380:intron | 40.0% | |
| ! | AACAGCATGTTTTACACCTG+TGG | + | chr4_1:6378296-6378315 | Msa0532380:intron | 40.0% |
| !!! | CCCCTTTTTGGAATTGTCAT+TGG | + | chr4_1:6378429-6378448 | Msa0532380:intron | 40.0% |
| AAGAATGCAACAGGTCTATC+TGG | + | chr4_1:6378499-6378518 | Msa0532380:intron | 40.0% | |
| AGAATGCAACAGGTCTATCT+GGG | + | chr4_1:6378500-6378519 | Msa0532380:intron | 40.0% | |
| ! | ATTTTCTGTGGCTACCTTTC+TGG | - | chr4_1:6378561-6378580 | None:intergenic | 40.0% |
| GAAAGGTAGCCACAGAAAAT+TGG | + | chr4_1:6378561-6378580 | Msa0532380:intron | 40.0% | |
| AGCCACAGAAAATTGGTTGT+AGG | + | chr4_1:6378568-6378587 | Msa0532380:intron | 40.0% | |
| GCCACAGAAAATTGGTTGTA+GGG | + | chr4_1:6378569-6378588 | Msa0532380:intron | 40.0% | |
| ! | ACCCTACAACCAATTTTCTG+TGG | - | chr4_1:6378573-6378592 | None:intergenic | 40.0% |
| ACAGAAAATTGGTTGTAGGG+TGG | + | chr4_1:6378572-6378591 | Msa0532380:intron | 40.0% | |
| ATTTGGACGACAAGATCTCT+TGG | + | chr4_1:6378644-6378663 | Msa0532380:intron | 40.0% | |
| TTCAAGGTTTCACACAAGAG+TGG | + | chr4_1:6378696-6378715 | Msa0532380:intron | 40.0% | |
| TCAAGGTTTCACACAAGAGT+GGG | + | chr4_1:6378697-6378716 | Msa0532380:intron | 40.0% | |
| !! | ATGTCAGGTTGTGACTTTTC+TGG | - | chr4_1:6378774-6378793 | None:intergenic | 40.0% |
| ! | GGTTAACTTGAGACTTTGAG+AGG | + | chr4_1:6378826-6378845 | Msa0532380:intron | 40.0% |
| ! | TATTTAGGTTTGATCGGCTG+AGG | + | chr4_1:6378906-6378925 | Msa0532380:intron | 40.0% |
| ! | GCTAGCTGATTCTCTGATTA+AGG | + | chr4_1:6378933-6378952 | Msa0532380:intron | 40.0% |
| !!! | ATTAAGGCTTTTTCAGCCCA+GGG | + | chr4_1:6378949-6378968 | Msa0532380:intron | 40.0% |
| CATACATTTCATAGAACCCC+TGG | - | chr4_1:6378969-6378988 | None:intergenic | 40.0% | |
| GTATCATACAGCAAATCTCC+TGG | - | chr4_1:6379340-6379359 | None:intergenic | 40.0% | |
| !! | ATACCTTCTAAGGTTCCTCT+TGG | + | chr4_1:6379356-6379375 | Msa0532380:CDS | 40.0% |
| TTCAATGACTGCATCTTTCC+TGG | + | chr4_1:6379386-6379405 | Msa0532380:CDS | 40.0% | |
| !! | AGAGGGTATCAAGCATCTTA+AGG | + | chr4_1:6379823-6379842 | Msa0532380:CDS | 40.0% |
| TTGTTCAGATTCAATGCAGG+GGG | + | chr4_1:6379948-6379967 | Msa0532380:intron | 40.0% | |
| TTTCGTTTCGTAGCATGCAT+AGG | + | chr4_1:6380077-6380096 | Msa0532380:intron | 40.0% | |
| TACACATGGGCATAATCGTA+CGG | + | chr4_1:6380274-6380293 | Msa0532380:CDS | 40.0% | |
| ! | TCTGTTACTCAGGTCAGTTT+TGG | + | chr4_1:6380338-6380357 | Msa0532380:intron | 40.0% |
| CGTCTTAATCCAGGTAAACA+GGG | - | chr4_1:6380401-6380420 | None:intergenic | 40.0% | |
| CCTGTTTACCTGGATTAAGA+CGG | + | chr4_1:6380399-6380418 | Msa0532380:intron | 40.0% | |
| ! | TCAGAAGATCTTTTCCACTC+CGG | - | chr4_1:6380578-6380597 | None:intergenic | 40.0% |
| CAGGCCCTTAGATTACTAAA+TGG | - | chr4_1:6380814-6380833 | None:intergenic | 40.0% | |
| TATTCTCAGTTTGAGTGGAC+AGG | - | chr4_1:6380833-6380852 | None:intergenic | 40.0% | |
| GGTTAGGTAAGGAATGAGTT+AGG | - | chr4_1:6380957-6380976 | None:intergenic | 40.0% | |
| CCTTACATTTCGGTTAGGTA+AGG | - | chr4_1:6380968-6380987 | None:intergenic | 40.0% | |
| CCTTACCTAACCGAAATGTA+AGG | + | chr4_1:6380965-6380984 | Msa0532380:intron | 40.0% | |
| !! | ACTAGCCTTACATTTCGGTT+AGG | - | chr4_1:6380973-6380992 | None:intergenic | 40.0% |
| !! | GCAGTACTAGCCTTACATTT+CGG | - | chr4_1:6380978-6380997 | None:intergenic | 40.0% |
| !! | GGGTTATATTGGGTTGAGTT+AGG | + | chr4_1:6381210-6381229 | Msa0532380:intron | 40.0% |
| GACTATACTGAATCCGTTGA+TGG | + | chr4_1:6381257-6381276 | Msa0532380:intron | 40.0% | |
| GAGTGTGAAGCTCATATGTT+TGG | + | chr4_1:6381310-6381329 | Msa0532380:intron | 40.0% | |
| TTGAAGATCAGATGTGAGAG+CGG | - | chr4_1:6381401-6381420 | None:intergenic | 40.0% | |
| ! | ACTTTCATTTCGAAGGGTAC+AGG | - | chr4_1:6381433-6381452 | None:intergenic | 40.0% |
| !! | CTACTAGTCAAGTTGAGGTT+TGG | - | chr4_1:6381587-6381606 | None:intergenic | 40.0% |
| GCAGATGATGCCAAAAATCA+AGG | + | chr4_1:6381933-6381952 | Msa0532380:intron | 40.0% | |
| ! | TTTTAAACTAGAGGGGAGTG+CGG | + | chr4_1:6382033-6382052 | Msa0532380:intron | 40.0% |
| ! | GGCATTTTTCCCATTCTCTT+AGG | + | chr4_1:6382179-6382198 | Msa0532380:intron | 40.0% |
| CATGGTTCTCCTAAGAGAAT+GGG | - | chr4_1:6382191-6382210 | None:intergenic | 40.0% | |
| TCATGGTTCTCCTAAGAGAA+TGG | - | chr4_1:6382192-6382211 | None:intergenic | 40.0% | |
| CAAACACTTAGATTGGGTGT+TGG | + | chr4_1:6382297-6382316 | Msa0532380:CDS | 40.0% | |
| ! | AACACTTAGATTGGGTGTTG+GGG | + | chr4_1:6382299-6382318 | Msa0532380:CDS | 40.0% |
| ACGAACTCTACCAAATCCCA+GGG | + | chr4_1:6373530-6373549 | Msa0532380:intron | 45.0% | |
| AAAGGATGAACCCTGGGATT+TGG | - | chr4_1:6373543-6373562 | None:intergenic | 45.0% | |
| AAAGGGAAAGGATGAACCCT+GGG | - | chr4_1:6373549-6373568 | None:intergenic | 45.0% | |
| GAGAATCTGTGGATCACGAA+AGG | - | chr4_1:6373567-6373586 | None:intergenic | 45.0% | |
| TGCGATTTGACAAACCTCGA+TGG | - | chr4_1:6373615-6373634 | None:intergenic | 45.0% | |
| TCAGATACTCGTTCTACGGA+AGG | - | chr4_1:6373688-6373707 | None:intergenic | 45.0% | |
| TTTGAATGCATCTCCGGTAC+CGG | + | chr4_1:6374066-6374085 | Msa0532380:CDS | 45.0% | |
| CACTGCCATGAAACCAAAAG+GGG | - | chr4_1:6374218-6374237 | None:intergenic | 45.0% | |
| GACACTGCCATGAAACCAAA+AGG | - | chr4_1:6374220-6374239 | None:intergenic | 45.0% | |
| ATGGCAGTGTCAACTTACGT+TGG | + | chr4_1:6374229-6374248 | Msa0532380:intron | 45.0% | |
| TGAAGCACAAACACGAACAC+CGG | + | chr4_1:6374258-6374277 | Msa0532380:intron | 45.0% | |
| ACCGGACATGACATTGATAC+TGG | + | chr4_1:6374276-6374295 | Msa0532380:intron | 45.0% | |
| !! | TGTTGGTGTCGTGTCATTGT+CGG | + | chr4_1:6374355-6374374 | Msa0532380:intron | 45.0% |
| TATCACAAGTGTAGGCGCTA+TGG | + | chr4_1:6374396-6374415 | Msa0532380:intron | 45.0% | |
| AACCAGTAACTTGAGGGATG+GGG | - | chr4_1:6374872-6374891 | None:intergenic | 45.0% | |
| !!! | GTATCTTTTTTAGGAGCGCG+AGG | + | chr4_1:6375191-6375210 | Msa0532380:intron | 45.0% |
| AGGTGACTGTGAATGATGCA+CGG | - | chr4_1:6375259-6375278 | None:intergenic | 45.0% | |
| TGATACAAGTAGGCTTCCTC+CGG | + | chr4_1:6375323-6375342 | Msa0532380:CDS | 45.0% | |
| AGCAAGTGGACCATGGAAAT+TGG | - | chr4_1:6375363-6375382 | None:intergenic | 45.0% | |
| TGATTATCACTGGCAGCAAG+TGG | - | chr4_1:6375377-6375396 | None:intergenic | 45.0% | |
| TGACTAGCAAGTTGTGAGCA+TGG | + | chr4_1:6376782-6376801 | Msa0532380:intron | 45.0% | |
| GCTGTAGGCCATATAAACGT+AGG | + | chr4_1:6376807-6376826 | Msa0532380:intron | 45.0% | |
| GGCCATATAAACGTAGGAAG+TGG | + | chr4_1:6376813-6376832 | Msa0532380:intron | 45.0% | |
| TACCCCCAATACCAGATATG+TGG | + | chr4_1:6377331-6377350 | Msa0532380:intron | 45.0% | |
| GTATAGTGTCTACAGTCCAC+AGG | - | chr4_1:6377364-6377383 | None:intergenic | 45.0% | |
| ! | GAGCCCTTTGTCTGATAATG+AGG | - | chr4_1:6377388-6377407 | None:intergenic | 45.0% |
| CAACTGTTCTGGTCATACTC+AGG | - | chr4_1:6377838-6377857 | None:intergenic | 45.0% | |
| GAGACAAATGTCGAGGAATC+TGG | + | chr4_1:6377939-6377958 | Msa0532380:intron | 45.0% | |
| TCTCATTAACAGCCGTCAAG+AGG | - | chr4_1:6377994-6378013 | None:intergenic | 45.0% | |
| AACAATGATGTGCACGGTTG+TGG | - | chr4_1:6378249-6378268 | None:intergenic | 45.0% | |
| ACACCTGTGGTCAACAACTT+CGG | + | chr4_1:6378309-6378328 | Msa0532380:intron | 45.0% | |
| ! | AAGCCTTGTATCAGTGACCA+CGG | - | chr4_1:6378526-6378545 | None:intergenic | 45.0% |
| TAGAAGCTTCACACGTGAGA+TGG | + | chr4_1:6378613-6378632 | Msa0532380:intron | 45.0% | |
| AGAAGCTTCACACGTGAGAT+GGG | + | chr4_1:6378614-6378633 | Msa0532380:intron | 45.0% | |
| ACGACAAGATCTCTTGGAAC+AGG | + | chr4_1:6378650-6378669 | Msa0532380:intron | 45.0% | |
| CAAGATCTCTTGGAACAGGA+TGG | + | chr4_1:6378654-6378673 | Msa0532380:intron | 45.0% | |
| ATCTCTTGGAACAGGATGGT+TGG | + | chr4_1:6378658-6378677 | Msa0532380:intron | 45.0% | |
| GCACTGTCTGATGTGATTCA+AGG | + | chr4_1:6378680-6378699 | Msa0532380:intron | 45.0% | |
| !! | TCACGAGAGTTGATGTTGCA+GGG | + | chr4_1:6378727-6378746 | Msa0532380:intron | 45.0% |
| GTTGCAGGGAAATTTCAGAG+TGG | + | chr4_1:6378741-6378760 | Msa0532380:intron | 45.0% | |
| GGAAATTTCAGAGTGGTGGT+TGG | + | chr4_1:6378748-6378767 | Msa0532380:intron | 45.0% | |
| !!! | GATTAAGGCTTTTTCAGCCC+AGG | + | chr4_1:6378948-6378967 | Msa0532380:intron | 45.0% |
| !!! | TTAAGGCTTTTTCAGCCCAG+GGG | + | chr4_1:6378950-6378969 | Msa0532380:intron | 45.0% |
| TTATCAACGGAGTCAGTGCA+TGG | - | chr4_1:6379101-6379120 | None:intergenic | 45.0% | |
| !! | CACTGACTCCGTTGATAATG+AGG | + | chr4_1:6379103-6379122 | Msa0532380:intron | 45.0% |
| TCACCAAGAGGAACCTTAGA+AGG | - | chr4_1:6379362-6379381 | None:intergenic | 45.0% | |
| !! | TCTTGATTTGCAGCTTGGTC+TGG | + | chr4_1:6379748-6379767 | Msa0532380:intron | 45.0% |
| ! | TGTCACTGGATAGTATCGAG+AGG | - | chr4_1:6379792-6379811 | None:intergenic | 45.0% |
| ACACATGGGCATAATCGTAC+GGG | + | chr4_1:6380275-6380294 | Msa0532380:CDS | 45.0% | |
| GAGAGAGAGCTACCGTAATA+AGG | - | chr4_1:6380369-6380388 | None:intergenic | 45.0% | |
| CCGTCTTAATCCAGGTAAAC+AGG | - | chr4_1:6380402-6380421 | None:intergenic | 45.0% | |
| CGGGTTTATAGATTCCTGGA+GGG | - | chr4_1:6380487-6380506 | None:intergenic | 45.0% | |
| TCGGGTTTATAGATTCCTGG+AGG | - | chr4_1:6380488-6380507 | None:intergenic | 45.0% | |
| ACACTCAAACCCTTCATTCG+AGG | - | chr4_1:6381296-6381315 | None:intergenic | 45.0% | |
| !! | AACTACGCTGGTGACTTGTT+AGG | + | chr4_1:6381360-6381379 | Msa0532380:intron | 45.0% |
| !! | CTAGTCAAGTTGAGGTTTGG+AGG | - | chr4_1:6381584-6381603 | None:intergenic | 45.0% |
| TCATCTGTGAGCTTGTCTCA+TGG | - | chr4_1:6382209-6382228 | None:intergenic | 45.0% | |
| ! | AATGCATTTTGCTGATCGGC+AGG | - | chr4_1:6382261-6382280 | None:intergenic | 45.0% |
| !!! | TTATACTTAATTATTTTAAA+TGG | - | chr4_1:6375890-6375909 | None:intergenic | 5.0% |
| !! | ATAATAAAATTAAATTAACA+AGG | + | chr4_1:6376858-6376877 | Msa0532380:intron | 5.0% |
| !!! | AATAATTATTGAATAATTTT+AGG | - | chr4_1:6377283-6377302 | None:intergenic | 5.0% |
| !! | TAAAACATTAAAAAAAAAAA+AGG | - | chr4_1:6377434-6377453 | None:intergenic | 5.0% |
| !!! | AATTTTTTTGTAAAATTAAA+TGG | - | chr4_1:6381647-6381666 | None:intergenic | 5.0% |
| TAACTGCGCTCTCTTCCTTC+CGG | + | chr4_1:6373400-6373419 | Msa0532380:intron | 50.0% | |
| CACGAACTCTACCAAATCCC+AGG | + | chr4_1:6373529-6373548 | Msa0532380:intron | 50.0% | |
| GAAAGGGAAAGGATGAACCC+TGG | - | chr4_1:6373550-6373569 | None:intergenic | 50.0% | |
| CTGTGGATCACGAAAGGGAA+AGG | - | chr4_1:6373561-6373580 | None:intergenic | 50.0% | |
| CGAGGTGAATCGAGAATCTG+TGG | - | chr4_1:6373578-6373597 | None:intergenic | 50.0% | |
| TCTTCATCTTCCTCCGGTAC+CGG | - | chr4_1:6374082-6374101 | None:intergenic | 50.0% | |
| !! | GCGCTATGGTGCTTTGGAAT+AGG | + | chr4_1:6374410-6374429 | Msa0532380:intron | 50.0% |
| ACCAGTAACTTGAGGGATGG+GGG | - | chr4_1:6374871-6374890 | None:intergenic | 50.0% | |
| TGATGCACGGGTCTATCATC+TGG | - | chr4_1:6375246-6375265 | None:intergenic | 50.0% | |
| GGTGACTGTGAATGATGCAC+GGG | - | chr4_1:6375258-6375277 | None:intergenic | 50.0% | |
| GATACAAGTAGGCTTCCTCC+GGG | + | chr4_1:6375324-6375343 | Msa0532380:CDS | 50.0% | |
| !! | GATTGGCCTGCAGTAGAAAG+TGG | + | chr4_1:6375776-6375795 | Msa0532380:intron | 50.0% |
| GCATCACCACTTTCTACTGC+AGG | - | chr4_1:6375785-6375804 | None:intergenic | 50.0% | |
| TGATGCTGCATGAACTGCCT+TGG | + | chr4_1:6375799-6375818 | Msa0532380:intron | 50.0% | |
| GTTGTGAGCATGGTTGCTGT+AGG | + | chr4_1:6376792-6376811 | Msa0532380:intron | 50.0% | |
| CAGGCACAGATCCACATATC+TGG | - | chr4_1:6377345-6377364 | None:intergenic | 50.0% | |
| GATATGTGGATCTGTGCCTG+TGG | + | chr4_1:6377345-6377364 | Msa0532380:intron | 50.0% | |
| AATATCCTCTGCTGCTCCCA+TGG | + | chr4_1:6377889-6377908 | Msa0532380:intron | 50.0% | |
| ACCATGGAAATTGCGGCCAT+GGG | - | chr4_1:6377908-6377927 | None:intergenic | 50.0% | |
| AACCATGGAAATTGCGGCCA+TGG | - | chr4_1:6377909-6377928 | None:intergenic | 50.0% | |
| TCAGAAGAGGGACCTCTTGA+CGG | + | chr4_1:6377979-6377998 | Msa0532380:intron | 50.0% | |
| GGGCTTGATCTCTTCAGTGA+CGG | + | chr4_1:6378147-6378166 | Msa0532380:intron | 50.0% | |
| GATCCGAAGTTGTTGACCAC+AGG | - | chr4_1:6378315-6378334 | None:intergenic | 50.0% | |
| ACCAGTGAGTCTCCTTGCTT+TGG | - | chr4_1:6378347-6378366 | None:intergenic | 50.0% | |
| GTGGTCACTGATACAAGGCT+TGG | + | chr4_1:6378525-6378544 | Msa0532380:intron | 50.0% | |
| GAAGCTTCACACGTGAGATG+GGG | + | chr4_1:6378615-6378634 | Msa0532380:intron | 50.0% | |
| !! | GTGAGATGGGGCATTGGATT+TGG | + | chr4_1:6378627-6378646 | Msa0532380:intron | 50.0% |
| !! | CTCACGAGAGTTGATGTTGC+AGG | + | chr4_1:6378726-6378745 | Msa0532380:intron | 50.0% |
| GCAGGGAAATTTCAGAGTGG+TGG | + | chr4_1:6378744-6378763 | Msa0532380:intron | 50.0% | |
| GCTAGCGGCCTCATTATCAA+CGG | - | chr4_1:6379114-6379133 | None:intergenic | 50.0% | |
| !! | GTTGATAATGAGGCCGCTAG+CGG | + | chr4_1:6379113-6379132 | Msa0532380:intron | 50.0% |
| ACCAACTGATCAACCGCTAG+CGG | - | chr4_1:6379129-6379148 | None:intergenic | 50.0% | |
| TGGTTAGATTGCCCTCCATC+AGG | + | chr4_1:6379314-6379333 | Msa0532380:CDS | 50.0% | |
| AAATCTCCTGGCCTGATGGA+GGG | - | chr4_1:6379328-6379347 | None:intergenic | 50.0% | |
| TCTCTGTCACCCTGTTTACC+TGG | + | chr4_1:6380389-6380408 | Msa0532380:intron | 50.0% | |
| ! | CTTGAGCACCGTCTTAATCC+AGG | - | chr4_1:6380410-6380429 | None:intergenic | 50.0% |
| GGAGGACAAACTACCATCTC+AGG | - | chr4_1:6380551-6380570 | None:intergenic | 50.0% | |
| ! | GGTAGTTTGTCCTCCTACTC+CGG | + | chr4_1:6380556-6380575 | Msa0532380:CDS | 50.0% |
| ! | GATCTTTTCCACTCCGGAGT+AGG | - | chr4_1:6380572-6380591 | None:intergenic | 50.0% |
| GTTCCTGACGAGGATGATGA+TGG | + | chr4_1:6380620-6380639 | Msa0532380:CDS | 50.0% | |
| ACTCCATCATCATCCTCGTC+AGG | - | chr4_1:6380626-6380645 | None:intergenic | 50.0% | |
| ATACCTGCAAATCAGGGCCT+GGG | - | chr4_1:6380649-6380668 | None:intergenic | 50.0% | |
| ! | AGAGAAATAGCGGAGCCGGA+AGG | - | chr4_1:6373418-6373437 | None:intergenic | 55.0% |
| ! | GGAGAGAGAAATAGCGGAGC+CGG | - | chr4_1:6373422-6373441 | None:intergenic | 55.0% |
| GTGGAGCTGATATAGCACGC+CGG | + | chr4_1:6374164-6374183 | Msa0532380:CDS | 55.0% | |
| TGGAGCTGATATAGCACGCC+GGG | + | chr4_1:6374165-6374184 | Msa0532380:CDS | 55.0% | |
| ! | TCGTGTCATTGTCGGACACC+TGG | + | chr4_1:6374363-6374382 | Msa0532380:intron | 55.0% |
| GTGTAGGCGCTATGGTGCTT+TGG | + | chr4_1:6374404-6374423 | Msa0532380:intron | 55.0% | |
| TCCCCCATCCCTCAAGTTAC+TGG | + | chr4_1:6374867-6374886 | Msa0532380:intron | 55.0% | |
| AAGTAGGCTTCCTCCGGGTA+AGG | + | chr4_1:6375329-6375348 | Msa0532380:intron | 55.0% | |
| AGTAGGCTTCCTCCGGGTAA+GGG | + | chr4_1:6375330-6375349 | Msa0532380:intron | 55.0% | |
| GGAAAGAAACCCTTACCCGG+AGG | - | chr4_1:6375342-6375361 | None:intergenic | 55.0% | |
| CTGCCTTGGACTGTCAGTGA+CGG | + | chr4_1:6375813-6375832 | Msa0532380:intron | 55.0% | |
| GATCCGTCACTGACAGTCCA+AGG | - | chr4_1:6375819-6375838 | None:intergenic | 55.0% | |
| TCCCATGGCCGCAATTTCCA+TGG | + | chr4_1:6377904-6377923 | Msa0532380:intron | 55.0% | |
| GCCAAAGCAAGGAGACTCAC+TGG | + | chr4_1:6378343-6378362 | Msa0532380:intron | 55.0% | |
| TCACACGTGAGATGGGGCAT+TGG | + | chr4_1:6378621-6378640 | Msa0532380:intron | 55.0% | |
| CAAATCTCCTGGCCTGATGG+AGG | - | chr4_1:6379329-6379348 | None:intergenic | 55.0% | |
| CAGCAAATCTCCTGGCCTGA+TGG | - | chr4_1:6379332-6379351 | None:intergenic | 55.0% | |
| TTTGTCCTCCTACTCCGGAG+TGG | + | chr4_1:6380561-6380580 | Msa0532380:CDS | 55.0% | |
| ! | CTTTTCCACTCCGGAGTAGG+AGG | - | chr4_1:6380569-6380588 | None:intergenic | 55.0% |
| TGGTGAAGCAGTTCCTGACG+AGG | + | chr4_1:6380610-6380629 | Msa0532380:CDS | 55.0% | |
| !! | GAGGATGATGATGGAGTCCC+AGG | + | chr4_1:6380629-6380648 | Msa0532380:CDS | 55.0% |
| CATACCTGCAAATCAGGGCC+TGG | - | chr4_1:6380650-6380669 | None:intergenic | 55.0% | |
| ! | CAGGCCCTGATTTGCAGGTA+TGG | + | chr4_1:6380648-6380667 | Msa0532380:intron | 55.0% |
| ! | GAATGCATCTCCGGTACCGG+AGG | + | chr4_1:6374069-6374088 | Msa0532380:CDS | 60.0% |
| CACTGGCAGCAAGTGGACCA+TGG | - | chr4_1:6375370-6375389 | None:intergenic | 60.0% | |
| CAACAGGTCTATCTGGGCCG+TGG | + | chr4_1:6378506-6378525 | Msa0532380:intron | 60.0% | |
| GGGCCGTGGTCACTGATACA+AGG | + | chr4_1:6378520-6378539 | Msa0532380:intron | 60.0% | |
| GCCGCTAGCGGTTGATCAGT+TGG | + | chr4_1:6379125-6379144 | Msa0532380:intron | 60.0% | |
| AGATTGCCCTCCATCAGGCC+AGG | + | chr4_1:6379319-6379338 | Msa0532380:CDS | 60.0% | |
| ! | TTTTCCGATGCACGCCCTCC+AGG | + | chr4_1:6380470-6380489 | Msa0532380:CDS | 60.0% |
| ! | GATTCCTGGAGGGCGTGCAT+CGG | - | chr4_1:6380477-6380496 | None:intergenic | 60.0% |
| ! | AGTCCCAGGCCCTGATTTGC+AGG | + | chr4_1:6380643-6380662 | Msa0532380:CDS | 60.0% |
| GCTGTACCCGTGCATACGCA+CGG | + | chr4_1:6382365-6382384 | Msa0532380:CDS | 60.0% | |
| CTGTACCCGTGCATACGCAC+GGG | + | chr4_1:6382366-6382385 | Msa0532380:CDS | 60.0% | |
| CGCAACCCGTGCGTATGCAC+GGG | - | chr4_1:6382374-6382393 | None:intergenic | 65.0% | |
| GCGCAACCCGTGCGTATGCA+CGG | - | chr4_1:6382375-6382394 | None:intergenic | 65.0% | |
| ! | ATACGCACGGGTTGCGCCGT+TGG | + | chr4_1:6382378-6382397 | Msa0532380:CDS | 65.0% |
| TGCGGCCATGGGAGCAGCAG+AGG | - | chr4_1:6377897-6377916 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 6373383 | 6382440 | 6373383 | ID=Msa0532380;Name=Msa0532380 |
| chr4_1 | mRNA | 6373383 | 6382440 | 6373383 | ID=Msa0532380-mRNA-1;Parent=Msa0532380;Name=Msa0532380-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.87|0.77|0.88|0.87|0.77|9|0|386 |
| chr4_1 | exon | 6373383 | 6373389 | 6373383 | ID=Msa0532380-mRNA-1:exon:2250;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6374056 | 6374186 | 6374056 | ID=Msa0532380-mRNA-1:exon:2251;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6375204 | 6375345 | 6375204 | ID=Msa0532380-mRNA-1:exon:2252;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6379312 | 6379463 | 6379312 | ID=Msa0532380-mRNA-1:exon:2253;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6379761 | 6379844 | 6379761 | ID=Msa0532380-mRNA-1:exon:2254;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6379956 | 6380018 | 6379956 | ID=Msa0532380-mRNA-1:exon:2255;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6380218 | 6380349 | 6380218 | ID=Msa0532380-mRNA-1:exon:2256;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6380458 | 6380664 | 6380458 | ID=Msa0532380-mRNA-1:exon:2257;Parent=Msa0532380-mRNA-1 |
| chr4_1 | exon | 6382201 | 6382440 | 6382201 | ID=Msa0532380-mRNA-1:exon:2258;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6373383 | 6373389 | 6373383 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6374056 | 6374186 | 6374056 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6375204 | 6375345 | 6375204 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6379312 | 6379463 | 6379312 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6379761 | 6379844 | 6379761 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6379956 | 6380018 | 6379956 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6380218 | 6380349 | 6380218 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6380458 | 6380664 | 6380458 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| chr4_1 | CDS | 6382201 | 6382440 | 6382201 | ID=Msa0532380-mRNA-1:cds;Parent=Msa0532380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
