Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379800 | XP_024633749.1 | 92.400 | 250 | 8 | 3 | 1 | 243 | 1 | 246 | 4.23e-149 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379800 | G7J545 | 90.551 | 254 | 9 | 4 | 1 | 243 | 1 | 250 | 1.22e-146 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045560 | Msa0379800 | 0.831584 | 1.536488e-55 | -8.615850e-47 |
| Msa0379800 | Msa0429010 | 0.837985 | 3.762617e-57 | -8.615850e-47 |
| Msa0379800 | Msa0429190 | 0.832433 | 9.479732e-56 | -8.615850e-47 |
| Msa0379800 | Msa0474550 | 0.844960 | 5.470108e-59 | -8.615850e-47 |
| Msa0379800 | Msa0475710 | 0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa0379800 | Msa0524350 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0379800 | Msa0532380 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
| Msa0379800 | Msa0698940 | 0.826122 | 3.225978e-54 | -8.615850e-47 |
| Msa0379800 | Msa0827500 | 0.811705 | 6.125526e-51 | -8.615850e-47 |
| Msa0379800 | Msa1145520 | 0.804657 | 1.944299e-49 | -8.615850e-47 |
| Msa0379800 | Msa1212590 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
| Msa0379800 | Msa1212630 | 0.801812 | 7.546703e-49 | -8.615850e-47 |
| Msa0379800 | Msa1353240 | 0.804895 | 1.734213e-49 | -8.615850e-47 |
| Msa0379800 | Msa1376260 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa0379800 | Msa1382450 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0379800 | Msa1404220 | 0.813488 | 2.495248e-51 | -8.615850e-47 |
| Msa0267530 | Msa0379800 | 0.842859 | 1.999155e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379800 | MtrunA17_Chr3g0132991 | 89.494 | 257 | 9 | 4 | 1 | 243 | 1 | 253 | 5.16e-150 | 443 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCCTCACCGATAAAT+AGG | 0.173877 | 3_1:+81192884 | None:intergenic |
| ACGCTGTAAGAGACGCTATT+TGG | 0.193083 | 3_1:+81192964 | None:intergenic |
| CTTTCGAAAGCTGGCTGATT+TGG | 0.211316 | 3_1:-81186796 | Msa0379800:three_prime_UTR |
| CATTTCAACGTGTTCGTAAA+TGG | 0.213736 | 3_1:-81186737 | Msa0379800:three_prime_UTR |
| ATGTGAAATACTTGGCTATT+TGG | 0.217172 | 3_1:-81188319 | Msa0379800:three_prime_UTR |
| TTGCATATGGATTCTATAAA+AGG | 0.237496 | 3_1:-81186410 | Msa0379800:three_prime_UTR |
| ATGTGATCTGTTTATGTATC+AGG | 0.249500 | 3_1:+81188348 | None:intergenic |
| ATATCAGAAGCAGCACTTAT+TGG | 0.263492 | 3_1:+81190028 | None:intergenic |
| TTTGGCAACTCACCAGCTTC+AGG | 0.297977 | 3_1:-81191777 | Msa0379800:CDS |
| AATTTCAAAACCCTATTTAT+CGG | 0.337364 | 3_1:-81192895 | Msa0379800:five_prime_UTR |
| TGACACCAACCGAGTTGATC+TGG | 0.352010 | 3_1:+81190484 | None:intergenic |
| CGCTGTAAGAGACGCTATTT+GGG | 0.355916 | 3_1:+81192965 | None:intergenic |
| TCTTGGTAAATTATATAATC+AGG | 0.358542 | 3_1:+81188886 | None:intergenic |
| GAAATTATGGCAGTCTTCAT+TGG | 0.360814 | 3_1:-81186595 | Msa0379800:intron |
| ACAGTGATTCTCCTGACTAA+TGG | 0.364707 | 3_1:+81190311 | None:intergenic |
| TTTGCATCCGAAATACTAGA+TGG | 0.373644 | 3_1:+81186765 | None:intergenic |
| AAAAGTAAATTTATTTGAAA+AGG | 0.380449 | 3_1:-81186709 | Msa0379800:three_prime_UTR |
| ACAGCATCAGCATCCCCTTT+AGG | 0.381092 | 3_1:+81187305 | None:intergenic |
| ACGAGCCAGATTGATCCTTC+AGG | 0.381822 | 3_1:-81190213 | Msa0379800:CDS |
| TCTCGAAGTCTTCGATTTCA+AGG | 0.386144 | 3_1:-81192841 | Msa0379800:CDS |
| GGCCCGTGTAATAATTATCT+TGG | 0.389994 | 3_1:+81188869 | None:intergenic |
| CAATGTTTCAACTGCATGTA+TGG | 0.396699 | 3_1:-81188813 | Msa0379800:three_prime_UTR |
| ATGAAGTCATCTATCCTAAA+GGG | 0.401879 | 3_1:-81187319 | Msa0379800:three_prime_UTR |
| GATATCAAGGAATGCAAATC+AGG | 0.403856 | 3_1:-81188610 | Msa0379800:three_prime_UTR |
| GGTGCCCTGCATATTGCATA+TGG | 0.405120 | 3_1:-81186423 | Msa0379800:three_prime_UTR |
| GGAAGATGACGAAACTAAAT+CGG | 0.407018 | 3_1:-81187922 | Msa0379800:three_prime_UTR |
| GATCATGCAGGCGAAACTTC+AGG | 0.408863 | 3_1:-81188585 | Msa0379800:intron |
| ATCTTCCTCACCGATAAATA+GGG | 0.413468 | 3_1:+81192885 | None:intergenic |
| ACGAGGCCTTTGATCTTGAA+TGG | 0.413685 | 3_1:-81188787 | Msa0379800:three_prime_UTR |
| ATAATTTCAGTTTCACTGAA+TGG | 0.414641 | 3_1:-81189894 | Msa0379800:intron |
| CTATGACCGACCAGAGAATA+GGG | 0.419780 | 3_1:-81190265 | Msa0379800:CDS |
| CGAGGCCTTTGATCTTGAAT+GGG | 0.420587 | 3_1:-81188786 | Msa0379800:three_prime_UTR |
| TTTGAAATTCCGTACTCGTT+CGG | 0.421804 | 3_1:+81192909 | None:intergenic |
| GGATCAATCTGGCTCGTCTC+AGG | 0.430351 | 3_1:+81190219 | None:intergenic |
| AAAGTGAAGAATTCTGAGTT+AGG | 0.430539 | 3_1:-81190354 | Msa0379800:CDS |
| TTTATGTATCAGGGACCAAT+TGG | 0.435267 | 3_1:+81188358 | None:intergenic |
| CACATCAACACAGGGAATAG+TGG | 0.436889 | 3_1:+81190452 | None:intergenic |
| TCAATCAAATTCCATTAGTC+AGG | 0.442248 | 3_1:-81190322 | Msa0379800:CDS |
| TTCTAATATACCATTGGAGC+AGG | 0.443482 | 3_1:+81186366 | None:intergenic |
| ACTATGACCGACCAGAGAAT+AGG | 0.445383 | 3_1:-81190266 | Msa0379800:CDS |
| TTGCAGTTGTTGATTCCAAT+TGG | 0.445416 | 3_1:-81188373 | Msa0379800:three_prime_UTR |
| GATGAAGTCATCTATCCTAA+AGG | 0.462397 | 3_1:-81187320 | Msa0379800:three_prime_UTR |
| GTTTGACTTCCACCTGAAGC+TGG | 0.465356 | 3_1:+81191765 | None:intergenic |
| ATTCCGTACTCGTTCGGACT+CGG | 0.468008 | 3_1:+81192915 | None:intergenic |
| AGAATCCATATGCAATATGC+AGG | 0.477774 | 3_1:+81186418 | None:intergenic |
| TTCACTGAATGGTTGTGGAT+TGG | 0.482378 | 3_1:-81189883 | Msa0379800:CDS |
| AGAGTTGGACAACGCGCTTA+AGG | 0.489701 | 3_1:-81186444 | Msa0379800:three_prime_UTR |
| GAATCGTACTTGAAGTTCAC+AGG | 0.492016 | 3_1:+81186672 | None:intergenic |
| TAAAGATTAATGTGATATCA+AGG | 0.492506 | 3_1:-81188623 | Msa0379800:three_prime_UTR |
| TCACCGAGTCCGAACGAGTA+CGG | 0.497308 | 3_1:-81192918 | Msa0379800:five_prime_UTR |
| TTTCTCTTGTAGTATGGATG+TGG | 0.501527 | 3_1:-81187943 | Msa0379800:intron |
| CGAGCCAGATTGATCCTTCA+GGG | 0.508542 | 3_1:-81190212 | Msa0379800:CDS |
| GTGTCATTAACGAATGTGTC+TGG | 0.511432 | 3_1:+81187248 | None:intergenic |
| ATCTCTGAATGTGAAATACT+TGG | 0.513333 | 3_1:-81188327 | Msa0379800:three_prime_UTR |
| CTGAATGGTTGTGGATTGGA+TGG | 0.516758 | 3_1:-81189879 | Msa0379800:CDS |
| TCAGTTTCACTGAATGGTTG+TGG | 0.519776 | 3_1:-81189888 | Msa0379800:intron |
| GGATAGATGACTTCATCAAA+AGG | 0.520124 | 3_1:+81187326 | None:intergenic |
| CACTATTCCCTGTGTTGATG+TGG | 0.524260 | 3_1:-81190451 | Msa0379800:CDS |
| GAGACCCTGAAGGATCAATC+TGG | 0.528731 | 3_1:+81190208 | None:intergenic |
| CTAGTTGTATCCCTATTCTC+TGG | 0.532283 | 3_1:+81190255 | None:intergenic |
| AATGATCTTACCGTGGGTGA+AGG | 0.541838 | 3_1:+81192752 | None:intergenic |
| TACCAAGATAATTATTACAC+GGG | 0.542362 | 3_1:-81188871 | Msa0379800:CDS |
| ACATCAACACAGGGAATAGT+GGG | 0.544813 | 3_1:+81190453 | None:intergenic |
| ATTCCCTGTGTTGATGTGGT+TGG | 0.547692 | 3_1:-81190447 | Msa0379800:CDS |
| AAAAGTTACACTACACTGGA+TGG | 0.548219 | 3_1:+81190186 | None:intergenic |
| GAGAGGTTCTAATATACCAT+TGG | 0.548509 | 3_1:+81186360 | None:intergenic |
| GACACCAACCGAGTTGATCT+GGG | 0.551967 | 3_1:+81190485 | None:intergenic |
| AAACCCCTCGTTCGAAACAA+TGG | 0.554774 | 3_1:-81190394 | Msa0379800:CDS |
| AAACAAGAAAATGTATTACA+AGG | 0.554857 | 3_1:-81191746 | Msa0379800:intron |
| ATGATCTTACCGTGGGTGAA+GGG | 0.560701 | 3_1:+81192753 | None:intergenic |
| TCTTCCATTGTTTCGAACGA+GGG | 0.563561 | 3_1:+81190390 | None:intergenic |
| GCATATTTCAGATAAAGAGT+TGG | 0.567659 | 3_1:-81186459 | Msa0379800:intron |
| ATCTTCCATTGTTTCGAACG+AGG | 0.576520 | 3_1:+81190389 | None:intergenic |
| TGTGATCTGTTTATGTATCA+GGG | 0.577802 | 3_1:+81188349 | None:intergenic |
| TTAATAGTCATATGTCATCC+TGG | 0.582928 | 3_1:-81186569 | Msa0379800:three_prime_UTR |
| AATTCCCCATTCAAGATCAA+AGG | 0.584989 | 3_1:+81188781 | None:intergenic |
| GAAGATGACGAAACTAAATC+GGG | 0.585369 | 3_1:-81187921 | Msa0379800:three_prime_UTR |
| CATATGTCATCCTGGTGAAG+TGG | 0.590235 | 3_1:-81186561 | Msa0379800:three_prime_UTR |
| TTGTATCCCTATTCTCTGGT+CGG | 0.592897 | 3_1:+81190259 | None:intergenic |
| CGCCTCTGACACCTCTGATG+CGG | 0.594770 | 3_1:-81189841 | Msa0379800:intron |
| AAAGAAAAGTTACACTACAC+TGG | 0.596485 | 3_1:+81190182 | None:intergenic |
| GCAAATCAGGTAGATCATGC+AGG | 0.596709 | 3_1:-81188597 | Msa0379800:three_prime_UTR |
| ACTGCCAACCACATCAACAC+AGG | 0.601967 | 3_1:+81190443 | None:intergenic |
| CAAAACCCTATTTATCGGTG+AGG | 0.611347 | 3_1:-81192890 | Msa0379800:five_prime_UTR |
| TACCGCATCAGAGGTGTCAG+AGG | 0.613927 | 3_1:+81189839 | None:intergenic |
| GAATCCATATGCAATATGCA+GGG | 0.617188 | 3_1:+81186419 | None:intergenic |
| TTAAAATTAACCACTTCACC+AGG | 0.618089 | 3_1:+81186551 | None:intergenic |
| CTTCCATTGTTTCGAACGAG+GGG | 0.618257 | 3_1:+81190391 | None:intergenic |
| TTACCAAGATAATTATTACA+CGG | 0.618606 | 3_1:-81188872 | Msa0379800:CDS |
| TCCAGATGCCCAGATCAACT+CGG | 0.618613 | 3_1:-81190493 | Msa0379800:intron |
| GGCAACTCACCAGCTTCAGG+TGG | 0.622778 | 3_1:-81191774 | Msa0379800:CDS |
| GATGCCCAGATCAACTCGGT+TGG | 0.630827 | 3_1:-81190489 | Msa0379800:CDS |
| GAGGCCTTTGATCTTGAATG+GGG | 0.639721 | 3_1:-81188785 | Msa0379800:three_prime_UTR |
| AATCTCGATCCCTTCACCCA+CGG | 0.641124 | 3_1:-81192762 | Msa0379800:intron |
| GATGACGAAACTAAATCGGG+TGG | 0.649914 | 3_1:-81187918 | Msa0379800:three_prime_UTR |
| CTATGTGAGAAGGTTAACAT+TGG | 0.651579 | 3_1:+81188848 | None:intergenic |
| TGAAGTCATCTATCCTAAAG+GGG | 0.652761 | 3_1:-81187318 | Msa0379800:three_prime_UTR |
| AACTGCATGTATGGAGCACG+AGG | 0.653847 | 3_1:-81188804 | Msa0379800:three_prime_UTR |
| GTACTTTCTTCAGAGTGGAA+CGG | 0.654333 | 3_1:-81188652 | Msa0379800:intron |
| CTGCCAACCACATCAACACA+GGG | 0.657590 | 3_1:+81190444 | None:intergenic |
| TCTGAAGAATCAGATACAAG+AGG | 0.658211 | 3_1:-81186856 | Msa0379800:three_prime_UTR |
| GAAGAATCAGATACAAGAGG+AGG | 0.661004 | 3_1:-81186853 | Msa0379800:three_prime_UTR |
| GCTTCTGATATTGCAGAGAA+CGG | 0.665326 | 3_1:-81190016 | Msa0379800:intron |
| ACACTGGATGGAGACCCTGA+AGG | 0.668886 | 3_1:+81190198 | None:intergenic |
| CTTGATGCAACTATGTGAGA+AGG | 0.670181 | 3_1:+81188838 | None:intergenic |
| AATCGTACTTGAAGTTCACA+GGG | 0.674039 | 3_1:+81186673 | None:intergenic |
| AAATTATATAATCAGGACGA+AGG | 0.689515 | 3_1:+81188893 | None:intergenic |
| GAGAATAGGGATACAACTAG+TGG | 0.706816 | 3_1:-81190252 | Msa0379800:CDS |
| CATCAACACAGGGAATAGTG+GGG | 0.755362 | 3_1:+81190454 | None:intergenic |
| TCTATAAAAGGAAATCACAG+CGG | 0.767722 | 3_1:-81186398 | Msa0379800:three_prime_UTR |
| AAGACTTCGAGATCTCTACG+TGG | 0.784795 | 3_1:+81192852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAT+TGG | + | chr3_1:81189241-81189260 | None:intergenic | 0.0% |
| !! | GAATATTAATAATATTAATG+AGG | - | chr3_1:81186971-81186990 | Msa0379800:intron | 10.0% |
| !! | TAATATTTCCAAATAAAAAA+TGG | + | chr3_1:81189407-81189426 | None:intergenic | 10.0% |
| !! | AAAAGTAAATTTATTTGAAA+AGG | - | chr3_1:81192641-81192660 | Msa0379800:intron | 10.0% |
| !!! | TTTAGTAATTTCATTTTTCA+AGG | - | chr3_1:81186768-81186787 | Msa0379800:three_prime_UTR | 15.0% |
| !!! | GTTTACTTTTTTTTTAAGAA+CGG | - | chr3_1:81186845-81186864 | Msa0379800:three_prime_UTR | 15.0% |
| !! | TTAATGCTTATTTATTTAAG+AGG | + | chr3_1:81187765-81187784 | None:intergenic | 15.0% |
| !! | TAAAGAAATATTTGATGTAA+TGG | + | chr3_1:81189765-81189784 | None:intergenic | 15.0% |
| !! | ATCAAATATTTCTTTATAAG+AGG | - | chr3_1:81189769-81189788 | Msa0379800:intron | 15.0% |
| !!! | TCTAAATGAATTTTATACTA+AGG | - | chr3_1:81190204-81190223 | Msa0379800:CDS | 15.0% |
| !! | TATAATATTGTTAGATAAAG+TGG | + | chr3_1:81190263-81190282 | None:intergenic | 15.0% |
| !!! | ATTGTTATTTAAATACACTT+TGG | - | chr3_1:81190847-81190866 | Msa0379800:intron | 15.0% |
| !! | AAATAGATAATCATGTATAT+AGG | - | chr3_1:81192286-81192305 | Msa0379800:intron | 15.0% |
| !! | TATTAAGAAAAGAAAATTGT+AGG | - | chr3_1:81192404-81192423 | Msa0379800:intron | 15.0% |
| !! | ATTAAGAAAAGAAAATTGTA+GGG | - | chr3_1:81192405-81192424 | Msa0379800:intron | 15.0% |
| !! | CTATTAAAAAAATGAAATCT+AGG | + | chr3_1:81192528-81192547 | None:intergenic | 15.0% |
| !! | AATTTCAAAACCCTATTTAT+CGG | - | chr3_1:81186455-81186474 | Msa0379800:intron | 20.0% |
| !!! | AATCTATTGAGATTTTTATC+GGG | + | chr3_1:81186555-81186574 | None:intergenic | 20.0% |
| !!! | GAATCTATTGAGATTTTTAT+CGG | + | chr3_1:81186556-81186575 | None:intergenic | 20.0% |
| !! | TAGGTCATATGAATTATAAA+AGG | - | chr3_1:81187013-81187032 | Msa0379800:intron | 20.0% |
| !! | CATATGAATTATAAAAGGAA+AGG | - | chr3_1:81187018-81187037 | Msa0379800:intron | 20.0% |
| !!! | TATAAAATTTGTTTACCCTA+AGG | - | chr3_1:81187044-81187063 | Msa0379800:intron | 20.0% |
| !!! | ATAAAATTTGTTTACCCTAA+GGG | - | chr3_1:81187045-81187064 | Msa0379800:intron | 20.0% |
| !! | ATGATATAGTAATAACAGAA+CGG | + | chr3_1:81187420-81187439 | None:intergenic | 20.0% |
| !! | AATACGGTAATAAGTAATAA+CGG | + | chr3_1:81187484-81187503 | None:intergenic | 20.0% |
| !!! | ATTACTTATTACCGTATTTT+AGG | - | chr3_1:81187486-81187505 | Msa0379800:intron | 20.0% |
| !! | ACAAAATTATGCCTAAAATA+CGG | + | chr3_1:81187500-81187519 | None:intergenic | 20.0% |
| !!! | ATTTTAGGCATAATTTTGTT+TGG | - | chr3_1:81187501-81187520 | Msa0379800:intron | 20.0% |
| !!! | TTTTAGGCATAATTTTGTTT+GGG | - | chr3_1:81187502-81187521 | Msa0379800:intron | 20.0% |
| !! | AAACAAGAAAATGTATTACA+AGG | - | chr3_1:81187604-81187623 | Msa0379800:intron | 20.0% |
| !! | TATACAAAAAAACAGCATAT+AGG | - | chr3_1:81187904-81187923 | Msa0379800:three_prime_UTR | 20.0% |
| !! | TTTAATTAATTCGGATCTAA+CGG | + | chr3_1:81188077-81188096 | None:intergenic | 20.0% |
| !! | TCCGAATTAATTAAAATTAG+CGG | - | chr3_1:81188082-81188101 | Msa0379800:intron | 20.0% |
| !!! | TCCGCTAATTTTAATTAATT+CGG | + | chr3_1:81188086-81188105 | None:intergenic | 20.0% |
| !!! | TATTTCATTATTTTGTCACA+GGG | + | chr3_1:81188221-81188240 | None:intergenic | 20.0% |
| !!! | ATATTTCATTATTTTGTCAC+AGG | + | chr3_1:81188222-81188241 | None:intergenic | 20.0% |
| !! | GTGACAAAATAATGAAATAT+CGG | - | chr3_1:81188222-81188241 | Msa0379800:intron | 20.0% |
| !! | ATGTCTAATTATTAAAACAG+TGG | - | chr3_1:81188377-81188396 | Msa0379800:three_prime_UTR | 20.0% |
| !!! | TTATTTTGAATGGCTTTAAA+TGG | + | chr3_1:81188435-81188454 | None:intergenic | 20.0% |
| !!! | ATGGAGTTATTTATTTTGAA+TGG | + | chr3_1:81188445-81188464 | None:intergenic | 20.0% |
| !! | ATTTCCTTTCTTCTTATAAA+GGG | + | chr3_1:81188606-81188625 | None:intergenic | 20.0% |
| !! | AATTTCCTTTCTTCTTATAA+AGG | + | chr3_1:81188607-81188626 | None:intergenic | 20.0% |
| !!! | TATAAGAAGAAAGGAAATTT+TGG | - | chr3_1:81188608-81188627 | Msa0379800:three_prime_UTR | 20.0% |
| !!! | ATAAGAAGAAAGGAAATTTT+GGG | - | chr3_1:81188609-81188628 | Msa0379800:three_prime_UTR | 20.0% |
| !!! | AAAAAAAACTAGCTTAAAGA+TGG | + | chr3_1:81188801-81188820 | None:intergenic | 20.0% |
| !!! | CAAATCTACCATTTTTTATT+TGG | - | chr3_1:81189396-81189415 | Msa0379800:intron | 20.0% |
| !! | TCAAAGGAAACTTATAAAAA+AGG | + | chr3_1:81189736-81189755 | None:intergenic | 20.0% |
| !! | TCTAATACTCACTTATTTAA+TGG | - | chr3_1:81189824-81189843 | Msa0379800:intron | 20.0% |
| !! | TTCTCATGTGTAAAATAAAT+GGG | + | chr3_1:81189994-81190013 | None:intergenic | 20.0% |
| !! | TTTCTCATGTGTAAAATAAA+TGG | + | chr3_1:81189995-81190014 | None:intergenic | 20.0% |
| !! | TAATACAAAAAGTAAGATAG+TGG | - | chr3_1:81190063-81190082 | Msa0379800:CDS | 20.0% |
| !! | AAAAATTCCCTTATAAGTAT+TGG | + | chr3_1:81190099-81190118 | None:intergenic | 20.0% |
| !! | TTCCTTAATATATGTGAATT+GGG | - | chr3_1:81190175-81190194 | Msa0379800:intron | 20.0% |
| !!! | ATAAAATGCTTTTATCATGT+TGG | - | chr3_1:81190331-81190350 | Msa0379800:CDS | 20.0% |
| !! | TCTTGGTAAATTATATAATC+AGG | + | chr3_1:81190467-81190486 | None:intergenic | 20.0% |
| !! | TTACCAAGATAATTATTACA+CGG | - | chr3_1:81190478-81190497 | Msa0379800:CDS | 20.0% |
| !! | TAAAGATTAATGTGATATCA+AGG | - | chr3_1:81190727-81190746 | Msa0379800:intron | 20.0% |
| !!! | TGTATGCATATACTTATTTT+AGG | - | chr3_1:81190937-81190956 | Msa0379800:intron | 20.0% |
| !!! | ATGTTTATTACTTTTTTCCT+TGG | - | chr3_1:81191087-81191106 | Msa0379800:intron | 20.0% |
| !!! | TTTTTATCAACTATAGTTGT+TGG | - | chr3_1:81191180-81191199 | Msa0379800:intron | 20.0% |
| !!! | TTTTATCAACTATAGTTGTT+GGG | - | chr3_1:81191181-81191200 | Msa0379800:intron | 20.0% |
| !!! | TCACAGTTAAAGTTTATTTT+TGG | - | chr3_1:81191292-81191311 | Msa0379800:intron | 20.0% |
| !!! | CACAGTTAAAGTTTATTTTT+GGG | - | chr3_1:81191293-81191312 | Msa0379800:intron | 20.0% |
| !! | TGCAAATATATTAATTACGT+TGG | + | chr3_1:81191379-81191398 | None:intergenic | 20.0% |
| !!! | TAAGTAAACTTGTTTAAATG+GGG | + | chr3_1:81191500-81191519 | None:intergenic | 20.0% |
| !!! | CTAAGTAAACTTGTTTAAAT+GGG | + | chr3_1:81191501-81191520 | None:intergenic | 20.0% |
| !!! | TCTAAGTAAACTTGTTTAAA+TGG | + | chr3_1:81191502-81191521 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGGTAAAGATAA+AGG | + | chr3_1:81192218-81192237 | None:intergenic | 20.0% |
| !!! | ACACATTCAAGTTTTTAAAA+GGG | + | chr3_1:81192230-81192249 | None:intergenic | 20.0% |
| !!! | AACACATTCAAGTTTTTAAA+AGG | + | chr3_1:81192231-81192250 | None:intergenic | 20.0% |
| !! | ATCTATTGAGATTTTTATCG+GGG | + | chr3_1:81186554-81186573 | None:intergenic | 25.0% |
| ! | TTGCTTAAATGGTAGAATTA+GGG | + | chr3_1:81186635-81186654 | None:intergenic | 25.0% |
| !! | ATTTTCAGTGTTCGAAATTT+AGG | - | chr3_1:81186719-81186738 | Msa0379800:three_prime_UTR | 25.0% |
| ! | AATCTAACCTAATTACGAAA+TGG | + | chr3_1:81186750-81186769 | None:intergenic | 25.0% |
| ! | AGTTTAAATTGTCAAGTAGA+TGG | - | chr3_1:81187180-81187199 | Msa0379800:intron | 25.0% |
| !! | TCTTTCATTTTGTAGAATAG+TGG | + | chr3_1:81187332-81187351 | None:intergenic | 25.0% |
| !! | AAACAAAAACAACACTGTTT+TGG | - | chr3_1:81187555-81187574 | Msa0379800:intron | 25.0% |
| ! | AGAAAATGTATTACAAGGTT+TGG | - | chr3_1:81187609-81187628 | Msa0379800:intron | 25.0% |
| ! | ACTTTCAACAATAAAAGAAG+GGG | + | chr3_1:81187636-81187655 | None:intergenic | 25.0% |
| ! | CACTTTCAACAATAAAAGAA+GGG | + | chr3_1:81187637-81187656 | None:intergenic | 25.0% |
| ! | ACACTTTCAACAATAAAAGA+AGG | + | chr3_1:81187638-81187657 | None:intergenic | 25.0% |
| ! | AAAGCAAAACTACTAAACTA+AGG | + | chr3_1:81187689-81187708 | None:intergenic | 25.0% |
| !!! | ATTTCATTATTTTGTCACAG+GGG | + | chr3_1:81188220-81188239 | None:intergenic | 25.0% |
| ! | TGCATTTGATACAAAAATGA+AGG | - | chr3_1:81188340-81188359 | Msa0379800:three_prime_UTR | 25.0% |
| ! | AATTATTAAAACAGTGGAGA+TGG | - | chr3_1:81188383-81188402 | Msa0379800:three_prime_UTR | 25.0% |
| !!! | TCCATTGTTTTTAGTTTGTA+CGG | - | chr3_1:81188460-81188479 | Msa0379800:intron | 25.0% |
| ! | TATAATAATTGTTTGTTCCC+TGG | + | chr3_1:81188496-81188515 | None:intergenic | 25.0% |
| !!! | ACCACTGATTTTCATTAATT+AGG | - | chr3_1:81188516-81188535 | Msa0379800:intron | 25.0% |
| ! | TCCTAATTAATGAAAATCAG+TGG | + | chr3_1:81188520-81188539 | None:intergenic | 25.0% |
| ! | GAAATGAGAACAAATAACTA+CGG | + | chr3_1:81188550-81188569 | None:intergenic | 25.0% |
| !! | TAAGAAGAAAGGAAATTTTG+GGG | - | chr3_1:81188610-81188629 | Msa0379800:three_prime_UTR | 25.0% |
| ! | AGAAAGAAAGAAATGAAAAC+AGG | + | chr3_1:81188708-81188727 | None:intergenic | 25.0% |
| ! | ACAACCATTTCAATTCTATA+TGG | - | chr3_1:81188740-81188759 | Msa0379800:intron | 25.0% |
| ! | GAAACCATATAGAATTGAAA+TGG | + | chr3_1:81188747-81188766 | None:intergenic | 25.0% |
| ! | AAACAAGAACAATTATGTCA+AGG | + | chr3_1:81188769-81188788 | None:intergenic | 25.0% |
| !!! | AGTATTTTAGATTTGGAAGT+AGG | - | chr3_1:81188927-81188946 | Msa0379800:intron | 25.0% |
| ! | ATAATTTCAGTTTCACTGAA+TGG | - | chr3_1:81189456-81189475 | Msa0379800:intron | 25.0% |
| ! | TAAATTACTCTAGCAAAGAT+AGG | + | chr3_1:81189558-81189577 | None:intergenic | 25.0% |
| ! | AATACTCACTTATTTAATGG+TGG | - | chr3_1:81189827-81189846 | Msa0379800:intron | 25.0% |
| !! | ATTTAATGGTGGAATTCATA+TGG | - | chr3_1:81189838-81189857 | Msa0379800:intron | 25.0% |
| !! | TTTAATGGTGGAATTCATAT+GGG | - | chr3_1:81189839-81189858 | Msa0379800:intron | 25.0% |
| !! | TTAACACTCACTCTTTTATT+GGG | + | chr3_1:81189920-81189939 | None:intergenic | 25.0% |
| !! | TTTAACACTCACTCTTTTAT+TGG | + | chr3_1:81189921-81189940 | None:intergenic | 25.0% |
| !!! | TTAAGGAAGGTTTGTTAATA+TGG | + | chr3_1:81190163-81190182 | None:intergenic | 25.0% |
| ! | CAATTCACATATATTAAGGA+AGG | + | chr3_1:81190176-81190195 | None:intergenic | 25.0% |
| ! | CTTCCTTAATATATGTGAAT+TGG | - | chr3_1:81190174-81190193 | Msa0379800:intron | 25.0% |
| ! | TACCCAATTCACATATATTA+AGG | + | chr3_1:81190180-81190199 | None:intergenic | 25.0% |
| !! | TGAATTTTATACTAAGGAAG+AGG | - | chr3_1:81190210-81190229 | Msa0379800:CDS | 25.0% |
| !!! | AGGAGATTAATTTTTTGGAT+TGG | - | chr3_1:81190230-81190249 | Msa0379800:CDS | 25.0% |
| ! | AAATTATATAATCAGGACGA+AGG | + | chr3_1:81190460-81190479 | None:intergenic | 25.0% |
| ! | TACCAAGATAATTATTACAC+GGG | - | chr3_1:81190479-81190498 | Msa0379800:CDS | 25.0% |
| ! | ATACGTATATTAACTTCTGT+CGG | + | chr3_1:81190873-81190892 | None:intergenic | 25.0% |
| !!! | TATACTTATTTTAGGCATTG+AGG | - | chr3_1:81190945-81190964 | Msa0379800:intron | 25.0% |
| ! | TAAAATGTTGCAAAGATTTC+AGG | - | chr3_1:81191133-81191152 | Msa0379800:intron | 25.0% |
| ! | TAAACTTTAACTGTGAGAAA+TGG | + | chr3_1:81191288-81191307 | None:intergenic | 25.0% |
| !! | TAAACTTTTCTCTTGTAGTA+TGG | - | chr3_1:81191401-81191420 | Msa0379800:intron | 25.0% |
| ! | GATGTCAAAGCAAAAAAAAT+AGG | + | chr3_1:81191582-81191601 | None:intergenic | 25.0% |
| ! | TTCATGATTCACATATCTTT+AGG | - | chr3_1:81191756-81191775 | Msa0379800:CDS | 25.0% |
| !! | AGAAACTTTAAAAATGACCA+AGG | + | chr3_1:81191835-81191854 | None:intergenic | 25.0% |
| !!! | GATGATTTAAAACAGTTTTG+AGG | - | chr3_1:81191999-81192018 | Msa0379800:intron | 25.0% |
| !!! | AGTTCTGAAAATCTCTAATT+TGG | - | chr3_1:81192465-81192484 | Msa0379800:intron | 25.0% |
| ! | CAAAAATCCATCTAGTATTT+CGG | - | chr3_1:81192578-81192597 | Msa0379800:intron | 25.0% |
| !! | TCGATTTGTGATATTTCTTA+TGG | - | chr3_1:81192832-81192851 | Msa0379800:CDS | 25.0% |
| ! | TTGCATATGGATTCTATAAA+AGG | - | chr3_1:81192940-81192959 | Msa0379800:five_prime_UTR | 25.0% |
| CTTGCTTAAATGGTAGAATT+AGG | + | chr3_1:81186636-81186655 | None:intergenic | 30.0% | |
| ! | AGCTAAGAAACTTGCTTAAA+TGG | + | chr3_1:81186646-81186665 | None:intergenic | 30.0% |
| !! | TACAAAATGCTGAGTTGATT+AGG | - | chr3_1:81186994-81187013 | Msa0379800:intron | 30.0% |
| CAGTTATTTAGGTCATGATA+AGG | + | chr3_1:81187355-81187374 | None:intergenic | 30.0% | |
| CATGGTAAAGACAGTTATTT+AGG | + | chr3_1:81187366-81187385 | None:intergenic | 30.0% | |
| TGTGCAACATAATATGAACA+TGG | + | chr3_1:81187384-81187403 | None:intergenic | 30.0% | |
| AGATTGACAATTTCTGTTGA+GGG | - | chr3_1:81187738-81187757 | Msa0379800:intron | 30.0% | |
| ACAGGTACATTATGAAAACT+TGG | + | chr3_1:81187802-81187821 | None:intergenic | 30.0% | |
| ! | AGTTTTCATAATGTACCTGT+TGG | - | chr3_1:81187802-81187821 | Msa0379800:intron | 30.0% |
| !!! | GTATATTTTTTGCGCAAAAG+TGG | + | chr3_1:81187889-81187908 | None:intergenic | 30.0% |
| !!! | GTGTATTCTGTTACGTTTTT+TGG | + | chr3_1:81187987-81188006 | None:intergenic | 30.0% |
| !! | TGAGAAAACTTTGCTATTGT+GGG | - | chr3_1:81188030-81188049 | Msa0379800:intron | 30.0% |
| TAAGAAACACCATTGTTATG+AGG | + | chr3_1:81188151-81188170 | None:intergenic | 30.0% | |
| !! | TTTCATTATTTTGTCACAGG+GGG | + | chr3_1:81188219-81188238 | None:intergenic | 30.0% |
| ATCTTATATGGCAATGATGA+AGG | + | chr3_1:81188250-81188269 | None:intergenic | 30.0% | |
| ! | ACACGATGAGATTAAGATTT+TGG | + | chr3_1:81188310-81188329 | None:intergenic | 30.0% |
| GGTTTAGTATGAGATTTATG+AGG | - | chr3_1:81188404-81188423 | Msa0379800:intron | 30.0% | |
| ACCGTACAAACTAAAAACAA+TGG | + | chr3_1:81188464-81188483 | None:intergenic | 30.0% | |
| ! | AAGAAGAAAGGAAATTTTGG+GGG | - | chr3_1:81188611-81188630 | Msa0379800:three_prime_UTR | 30.0% |
| TGAAATGGTTGTAGAATCTT+TGG | + | chr3_1:81188732-81188751 | None:intergenic | 30.0% | |
| AAAGTGAAGAATTCTGAGTT+AGG | - | chr3_1:81188996-81189015 | Msa0379800:intron | 30.0% | |
| TCAATCAAATTCCATTAGTC+AGG | - | chr3_1:81189028-81189047 | Msa0379800:intron | 30.0% | |
| AAAGAAAAGTTACACTACAC+TGG | + | chr3_1:81189171-81189190 | None:intergenic | 30.0% | |
| CATTTCCTTAAGCATTAATC+TGG | + | chr3_1:81189195-81189214 | None:intergenic | 30.0% | |
| CAGATTAATGCTTAAGGAAA+TGG | - | chr3_1:81189193-81189212 | Msa0379800:intron | 30.0% | |
| GGTAGATTTGATAAGTATCA+GGG | + | chr3_1:81189386-81189405 | None:intergenic | 30.0% | |
| TGGTAGATTTGATAAGTATC+AGG | + | chr3_1:81189387-81189406 | None:intergenic | 30.0% | |
| AAAAAAAAATACCGCATCAG+AGG | + | chr3_1:81189523-81189542 | None:intergenic | 30.0% | |
| ! | ACGAAGCAATTTTGCAAATT+TGG | + | chr3_1:81189614-81189633 | None:intergenic | 30.0% |
| !! | GATGTAATGGACTAATTCAA+AGG | + | chr3_1:81189752-81189771 | None:intergenic | 30.0% |
| TTATTGGGTGAAATCATTGT+GGG | + | chr3_1:81189905-81189924 | None:intergenic | 30.0% | |
| TTTATTGGGTGAAATCATTG+TGG | + | chr3_1:81189906-81189925 | None:intergenic | 30.0% | |
| !! | AGTAAGATAGTGGAATTATG+AGG | - | chr3_1:81190073-81190092 | Msa0379800:CDS | 30.0% |
| TTATGAGGCCAATACTTATA+AGG | - | chr3_1:81190088-81190107 | Msa0379800:CDS | 30.0% | |
| TATGAGGCCAATACTTATAA+GGG | - | chr3_1:81190089-81190108 | Msa0379800:intron | 30.0% | |
| !!! | GGAAGAGGAGATTAATTTTT+TGG | - | chr3_1:81190225-81190244 | Msa0379800:CDS | 30.0% |
| ATGTCAATGTAAAACCATTG+AGG | - | chr3_1:81190287-81190306 | Msa0379800:CDS | 30.0% | |
| TGTGATCTGTTTATGTATCA+GGG | + | chr3_1:81191004-81191023 | None:intergenic | 30.0% | |
| ATGTGATCTGTTTATGTATC+AGG | + | chr3_1:81191005-81191024 | None:intergenic | 30.0% | |
| ATCTCTGAATGTGAAATACT+TGG | - | chr3_1:81191023-81191042 | Msa0379800:intron | 30.0% | |
| ATGTGAAATACTTGGCTATT+TGG | - | chr3_1:81191031-81191050 | Msa0379800:intron | 30.0% | |
| ! | TGATTTGAAGTGGATATGTT+TGG | - | chr3_1:81191323-81191342 | Msa0379800:intron | 30.0% |
| TTAACAATTCTCACTCACTT+AGG | + | chr3_1:81191474-81191493 | None:intergenic | 30.0% | |
| TTGTCTTCTTTAGTGCTTAT+TGG | - | chr3_1:81191553-81191572 | Msa0379800:intron | 30.0% | |
| TCAAAACATTGAATAGACCA+AGG | + | chr3_1:81191640-81191659 | None:intergenic | 30.0% | |
| TGCATAATTTCTCTAATCCT+TGG | - | chr3_1:81191815-81191834 | Msa0379800:intron | 30.0% | |
| ! | TGTCTTATTGTTATTCTGTG+TGG | - | chr3_1:81191931-81191950 | Msa0379800:intron | 30.0% |
| ! | TATTGTTATTCTGTGTGGTT+TGG | - | chr3_1:81191936-81191955 | Msa0379800:intron | 30.0% |
| ! | ATTGTTATTCTGTGTGGTTT+GGG | - | chr3_1:81191937-81191956 | Msa0379800:intron | 30.0% |
| ATTAGCCAGCATAATGTAAT+TGG | + | chr3_1:81191969-81191988 | None:intergenic | 30.0% | |
| ATGAAGTCATCTATCCTAAA+GGG | - | chr3_1:81192031-81192050 | Msa0379800:intron | 30.0% | |
| !!! | AATTTTAACTTTGTCCACCA+TGG | - | chr3_1:81192187-81192206 | Msa0379800:intron | 30.0% |
| CATGTTGAGAGAACAATAAA+AGG | - | chr3_1:81192345-81192364 | Msa0379800:intron | 30.0% | |
| ATAAAAGGATTGACAATTGC+AGG | - | chr3_1:81192360-81192379 | Msa0379800:intron | 30.0% | |
| !!! | TAGTTTTTTCTTTCGAAAGC+TGG | - | chr3_1:81192545-81192564 | Msa0379800:intron | 30.0% |
| TTAATAGTCATATGTCATCC+TGG | - | chr3_1:81192781-81192800 | Msa0379800:CDS | 30.0% | |
| TTAAAATTAACCACTTCACC+AGG | + | chr3_1:81192802-81192821 | None:intergenic | 30.0% | |
| ! | GGTGAAGTGGTTAATTTTAA+TGG | - | chr3_1:81192802-81192821 | Msa0379800:CDS | 30.0% |
| !! | AGTGGTTAATTTTAATGGTG+AGG | - | chr3_1:81192807-81192826 | Msa0379800:CDS | 30.0% |
| GCATATTTCAGATAAAGAGT+TGG | - | chr3_1:81192891-81192910 | Msa0379800:five_prime_UTR | 30.0% | |
| TCTATAAAAGGAAATCACAG+CGG | - | chr3_1:81192952-81192971 | Msa0379800:five_prime_UTR | 30.0% | |
| ! | TTTGAAATTCCGTACTCGTT+CGG | + | chr3_1:81186444-81186463 | None:intergenic | 35.0% |
| ATCTTCCTCACCGATAAATA+GGG | + | chr3_1:81186468-81186487 | None:intergenic | 35.0% | |
| GGTTTAGCCATTTCGTAATT+AGG | - | chr3_1:81186740-81186759 | Msa0379800:three_prime_UTR | 35.0% | |
| TCACATACACATGTCACATA+TGG | + | chr3_1:81187458-81187477 | None:intergenic | 35.0% | |
| !! | AGGCATAATTTTGTTTGGGA+TGG | - | chr3_1:81187506-81187525 | Msa0379800:intron | 35.0% |
| GTTGAAATAGTTGTCGTTAG+TGG | - | chr3_1:81187712-81187731 | Msa0379800:intron | 35.0% | |
| GAGATTGACAATTTCTGTTG+AGG | - | chr3_1:81187737-81187756 | Msa0379800:intron | 35.0% | |
| GATTGACAATTTCTGTTGAG+GGG | - | chr3_1:81187739-81187758 | Msa0379800:intron | 35.0% | |
| ! | TCATAATGTACCTGTTGGTT+TGG | - | chr3_1:81187807-81187826 | Msa0379800:intron | 35.0% |
| TTGGGCTTTGCAAAAAATGT+CGG | + | chr3_1:81187841-81187860 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCAAAGCCCAATAC+TGG | - | chr3_1:81187844-81187863 | Msa0379800:intron | 35.0% |
| ! | TTTTTGCAAAGCCCAATACT+GGG | - | chr3_1:81187845-81187864 | Msa0379800:intron | 35.0% |
| TAAAATGTTCAGCCTCCAAA+AGG | + | chr3_1:81187939-81187958 | None:intergenic | 35.0% | |
| !! | GTGAGAAAACTTTGCTATTG+TGG | - | chr3_1:81188029-81188048 | Msa0379800:intron | 35.0% |
| GGAAATGAGACAAACAACTA+TGG | - | chr3_1:81188051-81188070 | Msa0379800:intron | 35.0% | |
| ATCACGGTCACAATCTTATA+TGG | + | chr3_1:81188262-81188281 | None:intergenic | 35.0% | |
| ATATGTTGTGATTGGGATCA+CGG | + | chr3_1:81188278-81188297 | None:intergenic | 35.0% | |
| CTGGTCTATATGTTGTGATT+GGG | + | chr3_1:81188285-81188304 | None:intergenic | 35.0% | |
| !! | TGAGATTAAGATTTTGGTGC+TGG | + | chr3_1:81188304-81188323 | None:intergenic | 35.0% |
| CACTCCCTTTATAAGAAGAA+AGG | - | chr3_1:81188599-81188618 | Msa0379800:three_prime_UTR | 35.0% | |
| !! | GGTTGGCAGTATTTTAGATT+TGG | - | chr3_1:81188920-81188939 | Msa0379800:intron | 35.0% |
| AAAAGTTACACTACACTGGA+TGG | + | chr3_1:81189167-81189186 | None:intergenic | 35.0% | |
| CTTTGCCAGATTAATGCTTA+AGG | - | chr3_1:81189187-81189206 | Msa0379800:intron | 35.0% | |
| ATATCAGAAGCAGCACTTAT+TGG | + | chr3_1:81189325-81189344 | None:intergenic | 35.0% | |
| ATAAGTATCAGGGATCTACT+AGG | + | chr3_1:81189376-81189395 | None:intergenic | 35.0% | |
| AAGGCATAAAATACTGCATG+TGG | + | chr3_1:81189583-81189602 | None:intergenic | 35.0% | |
| ! | ATGCAGTATTTTATGCCTTG+AGG | - | chr3_1:81189584-81189603 | Msa0379800:intron | 35.0% |
| GTCTTAAATTTAAGAGAGCG+TGG | + | chr3_1:81189692-81189711 | None:intergenic | 35.0% | |
| GTATTAGAGAGAACGTTGAA+AGG | + | chr3_1:81189812-81189831 | None:intergenic | 35.0% | |
| TATTGGGTGAAATCATTGTG+GGG | + | chr3_1:81189904-81189923 | None:intergenic | 35.0% | |
| !!! | TAATTTTTTGGATTGGTCCC+TGG | - | chr3_1:81190237-81190256 | Msa0379800:CDS | 35.0% |
| ATTGTTAGATAAAGTGGCCA+GGG | + | chr3_1:81190257-81190276 | None:intergenic | 35.0% | |
| TATTGTTAGATAAAGTGGCC+AGG | + | chr3_1:81190258-81190277 | None:intergenic | 35.0% | |
| !! | TATGAACTTTGAAGCCTCAA+TGG | + | chr3_1:81190304-81190323 | None:intergenic | 35.0% |
| CTATGTGAGAAGGTTAACAT+TGG | + | chr3_1:81190505-81190524 | None:intergenic | 35.0% | |
| CAATGTTTCAACTGCATGTA+TGG | - | chr3_1:81190537-81190556 | Msa0379800:intron | 35.0% | |
| AATTCCCCATTCAAGATCAA+AGG | + | chr3_1:81190572-81190591 | None:intergenic | 35.0% | |
| GATATCAAGGAATGCAAATC+AGG | - | chr3_1:81190740-81190759 | Msa0379800:intron | 35.0% | |
| ACATGGAGTGGTTTACAATT+TGG | - | chr3_1:81190813-81190832 | Msa0379800:intron | 35.0% | |
| ATAGTAAACCTCTCTGTTAC+TGG | - | chr3_1:81190902-81190921 | Msa0379800:intron | 35.0% | |
| AATTACAACCAGTAACAGAG+AGG | + | chr3_1:81190913-81190932 | None:intergenic | 35.0% | |
| !! | TTGCAGTTGTTGATTCCAAT+TGG | - | chr3_1:81190977-81190996 | Msa0379800:intron | 35.0% |
| TTTATGTATCAGGGACCAAT+TGG | + | chr3_1:81190995-81191014 | None:intergenic | 35.0% | |
| !! | AGTTGATAATTCACTCACCA+AGG | + | chr3_1:81191107-81191126 | None:intergenic | 35.0% |
| ! | GATTTCAGGTATACAACTGT+AGG | - | chr3_1:81191147-81191166 | Msa0379800:intron | 35.0% |
| !! | GGGTTAAAGTTGATTTGAAG+TGG | - | chr3_1:81191313-81191332 | Msa0379800:intron | 35.0% |
| TTTCTCTTGTAGTATGGATG+TGG | - | chr3_1:81191407-81191426 | Msa0379800:intron | 35.0% | |
| GGAAGATGACGAAACTAAAT+CGG | - | chr3_1:81191428-81191447 | Msa0379800:intron | 35.0% | |
| GAAGATGACGAAACTAAATC+GGG | - | chr3_1:81191429-81191448 | Msa0379800:intron | 35.0% | |
| TTCTTCCATTTCATGTTCCT+TGG | - | chr3_1:81191620-81191639 | Msa0379800:intron | 35.0% | |
| ATAGACCAAGGAACATGAAA+TGG | + | chr3_1:81191628-81191647 | None:intergenic | 35.0% | |
| !! | ATCTGTGCTTCTGAGATATT+TGG | - | chr3_1:81191659-81191678 | Msa0379800:intron | 35.0% |
| !! | TCCTTGATTGCTTTGTTTGT+TGG | - | chr3_1:81191700-81191719 | Msa0379800:intron | 35.0% |
| TCCAACAAACAAAGCAATCA+AGG | + | chr3_1:81191704-81191723 | None:intergenic | 35.0% | |
| ! | GTTTGTTGGAAATGTGAAGT+TGG | - | chr3_1:81191714-81191733 | Msa0379800:intron | 35.0% |
| CAATAAGACAAGTACATGTG+AGG | + | chr3_1:81191921-81191940 | None:intergenic | 35.0% | |
| ! | TTGTTATTCTGTGTGGTTTG+GGG | - | chr3_1:81191938-81191957 | Msa0379800:intron | 35.0% |
| GTTCTCCAATTACATTATGC+TGG | - | chr3_1:81191961-81191980 | Msa0379800:intron | 35.0% | |
| GGATAGATGACTTCATCAAA+AGG | + | chr3_1:81192027-81192046 | None:intergenic | 35.0% | |
| GATGAAGTCATCTATCCTAA+AGG | - | chr3_1:81192030-81192049 | Msa0379800:intron | 35.0% | |
| TGAAGTCATCTATCCTAAAG+GGG | - | chr3_1:81192032-81192051 | Msa0379800:intron | 35.0% | |
| TAAAGATAAAGGAAGCTCCA+TGG | + | chr3_1:81192207-81192226 | None:intergenic | 35.0% | |
| CTGAAAATCTCTAATTTGGC+AGG | - | chr3_1:81192469-81192488 | Msa0379800:intron | 35.0% | |
| TCTGAAGAATCAGATACAAG+AGG | - | chr3_1:81192494-81192513 | Msa0379800:intron | 35.0% | |
| TTTGCATCCGAAATACTAGA+TGG | + | chr3_1:81192588-81192607 | None:intergenic | 35.0% | |
| CATTTCAACGTGTTCGTAAA+TGG | - | chr3_1:81192613-81192632 | Msa0379800:intron | 35.0% | |
| AATCGTACTTGAAGTTCACA+GGG | + | chr3_1:81192680-81192699 | None:intergenic | 35.0% | |
| TTCTGATCAGCGTGAAATTA+TGG | - | chr3_1:81192742-81192761 | Msa0379800:intron | 35.0% | |
| GAAATTATGGCAGTCTTCAT+TGG | - | chr3_1:81192755-81192774 | Msa0379800:intron | 35.0% | |
| GAATCCATATGCAATATGCA+GGG | + | chr3_1:81192934-81192953 | None:intergenic | 35.0% | |
| AGAATCCATATGCAATATGC+AGG | + | chr3_1:81192935-81192954 | None:intergenic | 35.0% | |
| CAAAACCCTATTTATCGGTG+AGG | - | chr3_1:81186460-81186479 | Msa0379800:intron | 40.0% | |
| CATCTTCCTCACCGATAAAT+AGG | + | chr3_1:81186469-81186488 | None:intergenic | 40.0% | |
| TCTCGAAGTCTTCGATTTCA+AGG | - | chr3_1:81186509-81186528 | Msa0379800:intron | 40.0% | |
| CTACGAAATGATCTTACCGT+GGG | + | chr3_1:81186607-81186626 | None:intergenic | 40.0% | |
| TCTACGAAATGATCTTACCG+TGG | + | chr3_1:81186608-81186627 | None:intergenic | 40.0% | |
| TGAAACCTGCAGAATGCATT+AGG | - | chr3_1:81186797-81186816 | Msa0379800:three_prime_UTR | 40.0% | |
| ! | AAGAACGGTGTTAGACTCAA+TGG | - | chr3_1:81186860-81186879 | Msa0379800:three_prime_UTR | 40.0% |
| ATTTGTTTACCCTAAGGGCT+TGG | - | chr3_1:81187050-81187069 | Msa0379800:intron | 40.0% | |
| GTCAAGTAGATGGATGATGA+AGG | - | chr3_1:81187190-81187209 | Msa0379800:intron | 40.0% | |
| CCATAATGCAATTACATGCC+TGG | + | chr3_1:81187296-81187315 | None:intergenic | 40.0% | |
| CCAGGCATGTAATTGCATTA+TGG | - | chr3_1:81187293-81187312 | Msa0379800:three_prime_UTR | 40.0% | |
| GAAATAGTTGTCGTTAGTGG+CGG | - | chr3_1:81187715-81187734 | Msa0379800:intron | 40.0% | |
| !! | TAATGTACCTGTTGGTTTGG+TGG | - | chr3_1:81187810-81187829 | Msa0379800:intron | 40.0% |
| ! | TTTTGCAAAGCCCAATACTG+GGG | - | chr3_1:81187846-81187865 | Msa0379800:intron | 40.0% |
| AAGATTCGAACCCCAGTATT+GGG | + | chr3_1:81187859-81187878 | None:intergenic | 40.0% | |
| AAAGATTCGAACCCCAGTAT+TGG | + | chr3_1:81187860-81187879 | None:intergenic | 40.0% | |
| ! | AGGCTGAACATTTTACCAGT+GGG | - | chr3_1:81187944-81187963 | Msa0379800:intron | 40.0% |
| !!! | TTTTTTGGCATCCTGTTTCC+CGG | + | chr3_1:81187972-81187991 | None:intergenic | 40.0% |
| AACAGAATACACACACACTC+AGG | - | chr3_1:81187995-81188014 | Msa0379800:intron | 40.0% | |
| ACAGAATACACACACACTCA+GGG | - | chr3_1:81187996-81188015 | Msa0379800:intron | 40.0% | |
| ACCATTGTTATGAGGTTGTC+CGG | + | chr3_1:81188143-81188162 | None:intergenic | 40.0% | |
| AATTGACCTAATTTCTCCCG+TGG | - | chr3_1:81188185-81188204 | Msa0379800:intron | 40.0% | |
| GATAATCCACGGGAGAAATT+AGG | + | chr3_1:81188194-81188213 | None:intergenic | 40.0% | |
| ! | GCTGGTCTATATGTTGTGAT+TGG | + | chr3_1:81188286-81188305 | None:intergenic | 40.0% |
| ACATCAACACAGGGAATAGT+GGG | + | chr3_1:81188900-81188919 | None:intergenic | 40.0% | |
| TCTTCCATTGTTTCGAACGA+GGG | + | chr3_1:81188963-81188982 | None:intergenic | 40.0% | |
| ATCTTCCATTGTTTCGAACG+AGG | + | chr3_1:81188964-81188983 | None:intergenic | 40.0% | |
| ACAGTGATTCTCCTGACTAA+TGG | + | chr3_1:81189042-81189061 | None:intergenic | 40.0% | |
| TTGTATCCCTATTCTCTGGT+CGG | + | chr3_1:81189094-81189113 | None:intergenic | 40.0% | |
| CTAGTTGTATCCCTATTCTC+TGG | + | chr3_1:81189098-81189117 | None:intergenic | 40.0% | |
| GAGAATAGGGATACAACTAG+TGG | - | chr3_1:81189098-81189117 | Msa0379800:intron | 40.0% | |
| GCTTCTGATATTGCAGAGAA+CGG | - | chr3_1:81189334-81189353 | Msa0379800:intron | 40.0% | |
| TCAGTTTCACTGAATGGTTG+TGG | - | chr3_1:81189462-81189481 | Msa0379800:intron | 40.0% | |
| TTCACTGAATGGTTGTGGAT+TGG | - | chr3_1:81189467-81189486 | Msa0379800:intron | 40.0% | |
| TGCAAATTTGGATAGCCTCA+AGG | + | chr3_1:81189602-81189621 | None:intergenic | 40.0% | |
| TAGAGAGAACGTTGAAAGGA+GGG | + | chr3_1:81189808-81189827 | None:intergenic | 40.0% | |
| TTAGAGAGAACGTTGAAAGG+AGG | + | chr3_1:81189809-81189828 | None:intergenic | 40.0% | |
| TCTCCTTTCATGCAATCTTC+AGG | - | chr3_1:81190412-81190431 | Msa0379800:intron | 40.0% | |
| CATCCTGAAGATTGCATGAA+AGG | + | chr3_1:81190418-81190437 | None:intergenic | 40.0% | |
| GGCCCGTGTAATAATTATCT+TGG | + | chr3_1:81190484-81190503 | None:intergenic | 40.0% | |
| CTTGATGCAACTATGTGAGA+AGG | + | chr3_1:81190515-81190534 | None:intergenic | 40.0% | |
| GTACTTTCTTCAGAGTGGAA+CGG | - | chr3_1:81190698-81190717 | Msa0379800:intron | 40.0% | |
| ! | GGTATACAACTGTAGGCTTT+TGG | - | chr3_1:81191154-81191173 | Msa0379800:intron | 40.0% |
| !! | GCTTCTGAGATATTTGGCTT+AGG | - | chr3_1:81191665-81191684 | Msa0379800:intron | 40.0% |
| CATGTGAGGTAGAAAGGAAT+AGG | + | chr3_1:81191907-81191926 | None:intergenic | 40.0% | |
| CAAGTACATGTGAGGTAGAA+AGG | + | chr3_1:81191913-81191932 | None:intergenic | 40.0% | |
| ! | TGTTATTCTGTGTGGTTTGG+GGG | - | chr3_1:81191939-81191958 | Msa0379800:intron | 40.0% |
| ! | GTGTCATTAACGAATGTGTC+TGG | + | chr3_1:81192105-81192124 | None:intergenic | 40.0% |
| ACAAGCACAAGCTAACTTAC+TGG | + | chr3_1:81192146-81192165 | None:intergenic | 40.0% | |
| TTGTTCTCTCAACATGCACA+TGG | + | chr3_1:81192341-81192360 | None:intergenic | 40.0% | |
| GAAGAATCAGATACAAGAGG+AGG | - | chr3_1:81192497-81192516 | Msa0379800:intron | 40.0% | |
| GAATCGTACTTGAAGTTCAC+AGG | + | chr3_1:81192681-81192700 | None:intergenic | 40.0% | |
| CGCTGTAAGAGACGCTATTT+GGG | + | chr3_1:81186388-81186407 | None:intergenic | 45.0% | |
| ACGCTGTAAGAGACGCTATT+TGG | + | chr3_1:81186389-81186408 | None:intergenic | 45.0% | |
| AAGACTTCGAGATCTCTACG+TGG | + | chr3_1:81186501-81186520 | None:intergenic | 45.0% | |
| ATGATCTTACCGTGGGTGAA+GGG | + | chr3_1:81186600-81186619 | None:intergenic | 45.0% | |
| AATGATCTTACCGTGGGTGA+AGG | + | chr3_1:81186601-81186620 | None:intergenic | 45.0% | |
| AACCTGCAGAATGCATTAGG+AGG | - | chr3_1:81186800-81186819 | Msa0379800:three_prime_UTR | 45.0% | |
| ACTGGGGTTCGAATCTTTGT+AGG | - | chr3_1:81187862-81187881 | Msa0379800:intron | 45.0% | |
| ! | TATAGGAGTCGCAAGCCTTT+TGG | - | chr3_1:81187921-81187940 | Msa0379800:three_prime_UTR | 45.0% |
| ! | GAGGCTGAACATTTTACCAG+TGG | - | chr3_1:81187943-81187962 | Msa0379800:intron | 45.0% |
| ! | GGCTGAACATTTTACCAGTG+GGG | - | chr3_1:81187945-81187964 | Msa0379800:intron | 45.0% |
| !! | TTTTTGGCATCCTGTTTCCC+GGG | + | chr3_1:81187971-81187990 | None:intergenic | 45.0% |
| ACCGGACAACCTCATAACAA+TGG | - | chr3_1:81188139-81188158 | Msa0379800:intron | 45.0% | |
| CATCAGCAAACTGTTCTCAC+TGG | - | chr3_1:81188573-81188592 | Msa0379800:intron | 45.0% | |
| ATACATGTGACGACAACCAG+TGG | + | chr3_1:81188678-81188697 | None:intergenic | 45.0% | |
| CATCAACACAGGGAATAGTG+GGG | + | chr3_1:81188899-81188918 | None:intergenic | 45.0% | |
| CACATCAACACAGGGAATAG+TGG | + | chr3_1:81188901-81188920 | None:intergenic | 45.0% | |
| ! | CACTATTCCCTGTGTTGATG+TGG | - | chr3_1:81188899-81188918 | Msa0379800:CDS | 45.0% |
| ! | ATTCCCTGTGTTGATGTGGT+TGG | - | chr3_1:81188903-81188922 | Msa0379800:CDS | 45.0% |
| AAACCCCTCGTTCGAAACAA+TGG | - | chr3_1:81188956-81188975 | Msa0379800:intron | 45.0% | |
| CTTCCATTGTTTCGAACGAG+GGG | + | chr3_1:81188962-81188981 | None:intergenic | 45.0% | |
| ACTATGACCGACCAGAGAAT+AGG | - | chr3_1:81189084-81189103 | Msa0379800:intron | 45.0% | |
| CTATGACCGACCAGAGAATA+GGG | - | chr3_1:81189085-81189104 | Msa0379800:intron | 45.0% | |
| !! | CTGAATGGTTGTGGATTGGA+TGG | - | chr3_1:81189471-81189490 | Msa0379800:intron | 45.0% |
| ATGGGTCTCACCACTTTATG+TGG | - | chr3_1:81189857-81189876 | Msa0379800:CDS | 45.0% | |
| TGGGTCTCACCACTTTATGT+GGG | - | chr3_1:81189858-81189877 | Msa0379800:CDS | 45.0% | |
| GAAATGGGTCCCACATAAAG+TGG | + | chr3_1:81189870-81189889 | None:intergenic | 45.0% | |
| ACGAGGCCTTTGATCTTGAA+TGG | - | chr3_1:81190563-81190582 | Msa0379800:intron | 45.0% | |
| CGAGGCCTTTGATCTTGAAT+GGG | - | chr3_1:81190564-81190583 | Msa0379800:intron | 45.0% | |
| GAGGCCTTTGATCTTGAATG+GGG | - | chr3_1:81190565-81190584 | Msa0379800:intron | 45.0% | |
| GACGTGTACTTTCTTCAGAG+TGG | - | chr3_1:81190693-81190712 | Msa0379800:intron | 45.0% | |
| GCAAATCAGGTAGATCATGC+AGG | - | chr3_1:81190753-81190772 | Msa0379800:intron | 45.0% | |
| GTTGATGTCGTTGATCGACA+TGG | - | chr3_1:81190796-81190815 | Msa0379800:intron | 45.0% | |
| !! | CCAAGTCTTGTTAAGACTCG+TGG | + | chr3_1:81191220-81191239 | None:intergenic | 45.0% |
| CCACGAGTCTTAACAAGACT+TGG | - | chr3_1:81191217-81191236 | Msa0379800:intron | 45.0% | |
| GATGACGAAACTAAATCGGG+TGG | - | chr3_1:81191432-81191451 | Msa0379800:intron | 45.0% | |
| AGATAAAGGAAGCTCCATGG+TGG | + | chr3_1:81192204-81192223 | None:intergenic | 45.0% | |
| GGCTCTTATCTACAGAGAAC+AGG | - | chr3_1:81192307-81192326 | Msa0379800:intron | 45.0% | |
| CTTTCGAAAGCTGGCTGATT+TGG | - | chr3_1:81192554-81192573 | Msa0379800:intron | 45.0% | |
| CATATGTCATCCTGGTGAAG+TGG | - | chr3_1:81192789-81192808 | Msa0379800:CDS | 45.0% | |
| GTCTGAAAAACCTGCTCCAA+TGG | - | chr3_1:81192974-81192993 | Msa0379800:five_prime_UTR | 45.0% | |
| !! | AATAAAATAGTTATATATAA+TGG | + | chr3_1:81189644-81189663 | None:intergenic | 5.0% |
| ATTCCGTACTCGTTCGGACT+CGG | + | chr3_1:81186438-81186457 | None:intergenic | 50.0% | |
| AATCTCGATCCCTTCACCCA+CGG | - | chr3_1:81186588-81186607 | Msa0379800:intron | 50.0% | |
| TGCCTCCTAATGCATTCTGC+AGG | + | chr3_1:81186805-81186824 | None:intergenic | 50.0% | |
| TGCAGAATGCATTAGGAGGC+AGG | - | chr3_1:81186804-81186823 | Msa0379800:three_prime_UTR | 50.0% | |
| TTACCCTAAGGGCTTGGAAC+CGG | - | chr3_1:81187056-81187075 | Msa0379800:intron | 50.0% | |
| GTTATCACAAGTTCCCGTCC+CGG | + | chr3_1:81187078-81187097 | None:intergenic | 50.0% | |
| GTACGAAACAGCTGAAGACC+AGG | - | chr3_1:81187275-81187294 | Msa0379800:three_prime_UTR | 50.0% | |
| TTTGGCAACTCACCAGCTTC+AGG | - | chr3_1:81187573-81187592 | Msa0379800:intron | 50.0% | |
| ! | GTTTGACTTCCACCTGAAGC+TGG | + | chr3_1:81187588-81187607 | None:intergenic | 50.0% |
| ! | TGAAAGTGTGCAGCGTGCTT+TGG | - | chr3_1:81187649-81187668 | Msa0379800:intron | 50.0% |
| !!! | GCAGCGTGCTTTGGTTTTGT+CGG | - | chr3_1:81187658-81187677 | Msa0379800:intron | 50.0% |
| ! | AACATTTTACCAGTGGGGCC+CGG | - | chr3_1:81187950-81187969 | Msa0379800:intron | 50.0% |
| ACACACTCAGGGTGTGACTT+CGG | - | chr3_1:81188007-81188026 | Msa0379800:intron | 50.0% | |
| ! | GTTCCCTAGTCTTCTCTCAC+CGG | - | chr3_1:81188121-81188140 | Msa0379800:intron | 50.0% |
| TGTCCGGTGAGAGAAGACTA+GGG | + | chr3_1:81188127-81188146 | None:intergenic | 50.0% | |
| TTGTCCGGTGAGAGAAGACT+AGG | + | chr3_1:81188128-81188147 | None:intergenic | 50.0% | |
| ACAGGGGGATGATAATCCAC+GGG | + | chr3_1:81188204-81188223 | None:intergenic | 50.0% | |
| CACAGGGGGATGATAATCCA+CGG | + | chr3_1:81188205-81188224 | None:intergenic | 50.0% | |
| TTGTACGGTGAGAGAAGACC+AGG | - | chr3_1:81188475-81188494 | Msa0379800:intron | 50.0% | |
| TGTACGGTGAGAGAAGACCA+GGG | - | chr3_1:81188476-81188495 | Msa0379800:intron | 50.0% | |
| ! | TGGCGGATCTTTGTTGTGAC+GGG | + | chr3_1:81188658-81188677 | None:intergenic | 50.0% |
| !! | GTGGCGGATCTTTGTTGTGA+CGG | + | chr3_1:81188659-81188678 | None:intergenic | 50.0% |
| TCACAACAAAGATCCGCCAC+TGG | - | chr3_1:81188659-81188678 | Msa0379800:intron | 50.0% | |
| TCCAGATGCCCAGATCAACT+CGG | - | chr3_1:81188857-81188876 | Msa0379800:exon | 50.0% | |
| !! | GACACCAACCGAGTTGATCT+GGG | + | chr3_1:81188868-81188887 | None:intergenic | 50.0% |
| !! | TGACACCAACCGAGTTGATC+TGG | + | chr3_1:81188869-81188888 | None:intergenic | 50.0% |
| CTGCCAACCACATCAACACA+GGG | + | chr3_1:81188909-81188928 | None:intergenic | 50.0% | |
| ACTGCCAACCACATCAACAC+AGG | + | chr3_1:81188910-81188929 | None:intergenic | 50.0% | |
| ACGAGCCAGATTGATCCTTC+AGG | - | chr3_1:81189137-81189156 | Msa0379800:intron | 50.0% | |
| CGAGCCAGATTGATCCTTCA+GGG | - | chr3_1:81189138-81189157 | Msa0379800:intron | 50.0% | |
| GAGACCCTGAAGGATCAATC+TGG | + | chr3_1:81189145-81189164 | None:intergenic | 50.0% | |
| GGGGACTGCACATAGGAAAT+GGG | + | chr3_1:81189885-81189904 | None:intergenic | 50.0% | |
| TGGGGACTGCACATAGGAAA+TGG | + | chr3_1:81189886-81189905 | None:intergenic | 50.0% | |
| TCATTGTGGGGACTGCACAT+AGG | + | chr3_1:81189892-81189911 | None:intergenic | 50.0% | |
| ATCCTCACAAGAGAGAGCGA+GGG | + | chr3_1:81190034-81190053 | None:intergenic | 50.0% | |
| AATCCTCACAAGAGAGAGCG+AGG | + | chr3_1:81190035-81190054 | None:intergenic | 50.0% | |
| TCGCTCTCTCTTGTGAGGAT+TGG | - | chr3_1:81190034-81190053 | Msa0379800:CDS | 50.0% | |
| AACTGCATGTATGGAGCACG+AGG | - | chr3_1:81190546-81190565 | Msa0379800:intron | 50.0% | |
| GATCATGCAGGCGAAACTTC+AGG | - | chr3_1:81190765-81190784 | Msa0379800:intron | 50.0% | |
| TGTCGTTGATCGACATGGAG+TGG | - | chr3_1:81190801-81190820 | Msa0379800:intron | 50.0% | |
| ACAGCATCAGCATCCCCTTT+AGG | + | chr3_1:81192048-81192067 | None:intergenic | 50.0% | |
| AGAGTTGGACAACGCGCTTA+AGG | - | chr3_1:81192906-81192925 | Msa0379800:five_prime_UTR | 50.0% | |
| GGTGCCCTGCATATTGCATA+TGG | - | chr3_1:81192927-81192946 | Msa0379800:five_prime_UTR | 50.0% | |
| TCACCGAGTCCGAACGAGTA+CGG | - | chr3_1:81186432-81186451 | Msa0379800:three_prime_UTR | 55.0% | |
| TACCCTAAGGGCTTGGAACC+GGG | - | chr3_1:81187057-81187076 | Msa0379800:intron | 55.0% | |
| ! | AGGAGTCGCAAGCCTTTTGG+AGG | - | chr3_1:81187924-81187943 | Msa0379800:three_prime_UTR | 55.0% |
| ! | ACATTTTACCAGTGGGGCCC+GGG | - | chr3_1:81187951-81187970 | Msa0379800:intron | 55.0% |
| ! | GGCGGATCTTTGTTGTGACG+GGG | + | chr3_1:81188657-81188676 | None:intergenic | 55.0% |
| CATGTGACGACAACCAGTGG+CGG | + | chr3_1:81188675-81188694 | None:intergenic | 55.0% | |
| !! | ACCGAGTTGATCTGGGCATC+TGG | + | chr3_1:81188861-81188880 | None:intergenic | 55.0% |
| GATGCCCAGATCAACTCGGT+TGG | - | chr3_1:81188861-81188880 | Msa0379800:CDS | 55.0% | |
| ! | GGATCAATCTGGCTCGTCTC+AGG | + | chr3_1:81189134-81189153 | None:intergenic | 55.0% |
| ACACTGGATGGAGACCCTGA+AGG | + | chr3_1:81189155-81189174 | None:intergenic | 55.0% | |
| !! | TACCGCATCAGAGGTGTCAG+AGG | + | chr3_1:81189514-81189533 | None:intergenic | 55.0% |
| TCACAAGAGAGAGCGAGGGA+GGG | + | chr3_1:81190030-81190049 | None:intergenic | 55.0% | |
| GTCCCGGTTCCAAGCCCTTA+GGG | + | chr3_1:81187062-81187081 | None:intergenic | 60.0% | |
| CTAAGGGCTTGGAACCGGGA+CGG | - | chr3_1:81187061-81187080 | Msa0379800:intron | 60.0% | |
| TAAGGGCTTGGAACCGGGAC+GGG | - | chr3_1:81187062-81187081 | Msa0379800:intron | 60.0% | |
| GGCAACTCACCAGCTTCAGG+TGG | - | chr3_1:81187576-81187595 | Msa0379800:intron | 60.0% | |
| CGCCTCTGACACCTCTGATG+CGG | - | chr3_1:81189509-81189528 | Msa0379800:intron | 60.0% | |
| CTCACAAGAGAGAGCGAGGG+AGG | + | chr3_1:81190031-81190050 | None:intergenic | 60.0% | |
| CTCCCTCGCTCTCTCTTGTG+AGG | - | chr3_1:81190029-81190048 | Msa0379800:CDS | 60.0% | |
| CGTCCCGGTTCCAAGCCCTT+AGG | + | chr3_1:81187063-81187082 | None:intergenic | 65.0% | |
| GGCGCAGCCACCAAACCAAC+AGG | + | chr3_1:81187820-81187839 | None:intergenic | 65.0% | |
| ACCAGTGGGGCCCGGGAAAC+AGG | - | chr3_1:81187958-81187977 | Msa0379800:intron | 70.0% | |
| TCCTGTTTCCCGGGCCCCAC+TGG | + | chr3_1:81187962-81187981 | None:intergenic | 70.0% | |
| CGGGGTTCAGCGAGCTGTCG+TGG | + | chr3_1:81188639-81188658 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 81186374 | 81192998 | 81186374 | ID=Msa0379800;Name=Msa0379800 |
| chr3_1 | mRNA | 81186374 | 81192998 | 81186374 | ID=Msa0379800-mRNA-1;Parent=Msa0379800;Name=Msa0379800-mRNA-1;_AED=0.06;_eAED=0.06;_QI=112|0.76|0.78|1|0.46|0.42|14|847|245 |
| chr3_1 | exon | 81186374 | 81186470 | 81186374 | ID=Msa0379800-mRNA-1:exon:20542;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81186549 | 81186604 | 81186549 | ID=Msa0379800-mRNA-1:exon:20541;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81186681 | 81186881 | 81186681 | ID=Msa0379800-mRNA-1:exon:20540;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81187227 | 81187358 | 81187227 | ID=Msa0379800-mRNA-1:exon:20539;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81187897 | 81187953 | 81187897 | ID=Msa0379800-mRNA-1:exon:20538;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81188305 | 81188413 | 81188305 | ID=Msa0379800-mRNA-1:exon:20537;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81188586 | 81188661 | 81188586 | ID=Msa0379800-mRNA-1:exon:20536;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81188742 | 81188938 | 81188742 | ID=Msa0379800-mRNA-1:exon:20535;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81189842 | 81189906 | 81189842 | ID=Msa0379800-mRNA-1:exon:20534;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81190017 | 81190107 | 81190017 | ID=Msa0379800-mRNA-1:exon:20533;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81190197 | 81190423 | 81190197 | ID=Msa0379800-mRNA-1:exon:20532;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81190445 | 81190510 | 81190445 | ID=Msa0379800-mRNA-1:exon:20531;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81191747 | 81191833 | 81191747 | ID=Msa0379800-mRNA-1:exon:20530;Parent=Msa0379800-mRNA-1 |
| chr3_1 | exon | 81192763 | 81192998 | 81192763 | ID=Msa0379800-mRNA-1:exon:20529;Parent=Msa0379800-mRNA-1 |
| chr3_1 | five_prime_UTR | 81192887 | 81192998 | 81192887 | ID=Msa0379800-mRNA-1:five_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81192763 | 81192886 | 81192763 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81191747 | 81191833 | 81191747 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81190445 | 81190510 | 81190445 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81190197 | 81190423 | 81190197 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81190017 | 81190107 | 81190017 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81189842 | 81189906 | 81189842 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | CDS | 81188861 | 81188938 | 81188861 | ID=Msa0379800-mRNA-1:cds;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81188742 | 81188860 | 81188742 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81188586 | 81188661 | 81188586 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81188305 | 81188413 | 81188305 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81187897 | 81187953 | 81187897 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81187227 | 81187358 | 81187227 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81186681 | 81186881 | 81186681 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81186549 | 81186604 | 81186549 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| chr3_1 | three_prime_UTR | 81186374 | 81186470 | 81186374 | ID=Msa0379800-mRNA-1:three_prime_utr;Parent=Msa0379800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
