AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0705500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705500 MtrunA17_Chr8g0384191 99.205 755 6 0 1 755 1 755 0.0 1535
Msa0705500 MtrunA17_Chr3g0130091 75.926 216 48 2 1 214 1 214 3.45e-111 343
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705500 AT5G64070.2 62.642 795 247 14 1 755 3 787 0.0 936
Msa0705500 AT5G64070.1 62.642 795 247 14 1 755 3 787 0.0 934
Msa0705500 AT5G09350.1 60.908 793 259 12 1 755 3 782 0.0 923

Find 186 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCAAGAGGTGAAAGAATT+TGG 0.159637 4_4:+78233097 None:intergenic
GTGAAAATGGTTGGCTTATT+AGG 0.167216 4_4:-78232719 Msa0705500:CDS
AGATTCAGGCTAACAAATTT+TGG 0.194951 4_4:+78227873 None:intergenic
GGACATTTCTCTTCAGAATT+AGG 0.201559 4_4:+78231655 None:intergenic
AGAAAGAGAATTTCTTTAAA+AGG 0.204269 4_4:-78231966 Msa0705500:CDS
CCCCTTGGGCTTATCCATTA+TGG 0.212232 4_4:-78227986 Msa0705500:CDS
ATTTATCCCTGAAGAATTTC+CGG 0.223562 4_4:+78231596 None:intergenic
ACAATTGACGGTTCGAATTT+CGG 0.252579 4_4:+78233059 None:intergenic
TCACTATGTGACACATCTTA+TGG 0.256714 4_4:-78229151 Msa0705500:CDS
TCATCCTCTTCATCAGGTTT+TGG 0.261617 4_4:+78231634 None:intergenic
TAAAGCACCACCTCGGAAAA+AGG 0.285319 4_4:-78227724 Msa0705500:CDS
CACGGTCTTTGAACAATTTA+CGG 0.292700 4_4:+78231380 None:intergenic
AGCAAGAGGTGAAAGAATTT+GGG 0.299935 4_4:+78233098 None:intergenic
ATTCTCTTTCTCAGAGTCTA+AGG 0.318759 4_4:+78231978 None:intergenic
GTGTTTCCACTGACAGATTC+AGG 0.323756 4_4:+78227859 None:intergenic
ACTAGTGATTCTAGTGAAAA+TGG 0.334740 4_4:-78232732 Msa0705500:CDS
TCCTCTTGCATATTATTTCC+CGG 0.336403 4_4:+78232225 None:intergenic
TTTGATTTGTCAGAGGATTA+GGG 0.349846 4_4:-78232945 Msa0705500:five_prime_UTR
TGATGGGATTAGTAGGATTC+AGG 0.351589 4_4:-78232424 Msa0705500:CDS
AAAGGTTCTTAAGAGATAGT+AGG 0.351646 4_4:-78231948 Msa0705500:CDS
TCTTCTATTGCCACTGTACT+TGG 0.357360 4_4:+78227687 None:intergenic
TTAAATATCCTATTCTCATC+AGG 0.359261 4_4:+78232186 None:intergenic
TTCTCAAGGTGGAATTCCTT+TGG 0.363024 4_4:-78228039 Msa0705500:CDS
CTGAACTTTCCTTGTTCAAA+AGG 0.367792 4_4:-78231504 Msa0705500:CDS
TGACAGCTGATCCTGGGGTT+AGG 0.371582 4_4:-78227764 Msa0705500:CDS
TGACTTTGACTCAATTTCCC+TGG 0.372782 4_4:+78232761 None:intergenic
ACCTCTTGTGCTGTCCATAA+TGG 0.386469 4_4:+78227972 None:intergenic
TTGAGAAAGCTTCTGAGAAC+TGG 0.397468 4_4:+78228055 None:intergenic
AAGCTGTTCTCTTGAATTCT+CGG 0.398115 4_4:-78228251 Msa0705500:CDS
ATCCATCTCAGTTCCGTAAA+GGG 0.398557 4_4:-78229204 Msa0705500:CDS
GAGATGGATTGATCGGTAAT+GGG 0.400367 4_4:+78229218 None:intergenic
GACTTTGACTCAATTTCCCT+GGG 0.403873 4_4:+78232762 None:intergenic
CAATGCAATCTTAAGCGACT+TGG 0.405719 4_4:+78232494 None:intergenic
GTAACAGAGGTTCAGAATAC+TGG 0.408394 4_4:-78228937 Msa0705500:CDS
TGAAAGAATTTGGGGATTGT+TGG 0.411215 4_4:+78233107 None:intergenic
ATGATAATGATGGGATTAGT+AGG 0.414622 4_4:-78232431 Msa0705500:CDS
GAGGGAGGTGGTAACGGTGG+TGG 0.415183 4_4:+78233277 None:intergenic
TGTACAAGCTACAAAGAATC+TGG 0.419408 4_4:+78233001 None:intergenic
AGTCATGGTAAGCCCCTTTA+CGG 0.426797 4_4:+78229191 None:intergenic
AATTGAAGATTCAGAGCTGC+TGG 0.427316 4_4:-78231350 Msa0705500:CDS
GGTGGAATTCCTTTGGCAAA+TGG 0.429030 4_4:-78228032 Msa0705500:CDS
CGCTGTCTCCTGATGAGAAT+AGG 0.429211 4_4:-78232194 Msa0705500:CDS
AATCAATTAGCGCGTTGGAT+TGG 0.430233 4_4:+78233220 None:intergenic
TGAGATGGATTGATCGGTAA+TGG 0.433249 4_4:+78229217 None:intergenic
GCATGATCATGCCGGGGTGC+GGG 0.436616 4_4:-78232643 Msa0705500:CDS
CACTATGTGACACATCTTAT+GGG 0.437834 4_4:-78229150 Msa0705500:CDS
AAAAGGATGGTTTCTTTCAA+AGG 0.440298 4_4:-78231894 Msa0705500:CDS
AAGAATTTGGGGATTGTTGG+CGG 0.444189 4_4:+78233110 None:intergenic
ACACAAGCCTAGTCCGTCAT+TGG 0.444938 4_4:-78232541 Msa0705500:CDS
ATTCTTCAGGGATAAATTTG+AGG 0.453710 4_4:-78231590 Msa0705500:CDS
AGAGTCTAAGGCATCTTTCT+CGG 0.453762 4_4:+78231990 None:intergenic
GTCAATGAAAATAGCAATAA+CGG 0.454848 4_4:-78231442 Msa0705500:CDS
TCAGATTGCAGCTACTTTGA+TGG 0.455400 4_4:-78232394 Msa0705500:CDS
AGGCTCTTCTTCCTCGCCAT+TGG 0.456515 4_4:+78231528 None:intergenic
ATGTATACTCTTCCCTTGAC+AGG 0.460922 4_4:-78232603 Msa0705500:CDS
AATTGCCTGAGCAGTCGATC+TGG 0.462214 4_4:+78227923 None:intergenic
GGTTAGGTTGGAAGATATTG+AGG 0.462981 4_4:-78227748 Msa0705500:CDS
GTAGTATTGACAGCTGATCC+TGG 0.464657 4_4:-78227771 Msa0705500:CDS
TTTCACTAGAATCACTAGTC+AGG 0.465454 4_4:+78232736 None:intergenic
AGCATGATCATGCCGGGGTG+CGG 0.465575 4_4:-78232644 Msa0705500:CDS
ACATCCTATCATTGCTATTA+CGG 0.468051 4_4:+78227946 None:intergenic
GTCTGTTTCCCACTGGGAAA+GGG 0.478023 4_4:-78228306 Msa0705500:CDS
AGCAGAACATGACAGTGATC+TGG 0.478274 4_4:-78227805 Msa0705500:CDS
ACTTCGATGCATATCATGTA+AGG 0.479141 4_4:+78228219 None:intergenic
TCTTATCTTCGAATTTCTCC+CGG 0.481263 4_4:+78231713 None:intergenic
AGCTGATCCTGGGGTTAGGT+TGG 0.483412 4_4:-78227760 Msa0705500:CDS
TGTTGGCGGAATTTGAATTG+AGG 0.485652 4_4:+78233124 None:intergenic
AAAGTTTATGCCAAGTCCTA+AGG 0.486629 4_4:-78232163 Msa0705500:CDS
CGTCAATTGTTGCTCTGCGA+GGG 0.487467 4_4:-78233046 Msa0705500:five_prime_UTR
AGCTGTTCTCTTGAATTCTC+GGG 0.490478 4_4:-78228250 Msa0705500:CDS
CCTCGCAGAGCAACAATTGA+CGG 0.491757 4_4:+78233047 None:intergenic
AGATGACGGTGATTCTGAAA+AGG 0.499989 4_4:-78232103 Msa0705500:CDS
TCTCTTGAATTCTCGGGAGA+AGG 0.500659 4_4:-78228244 Msa0705500:CDS
AAGGTTCTTAAGAGATAGTA+GGG 0.501654 4_4:-78231947 Msa0705500:CDS
GAGGGTGTATATGAAGCATC+AGG 0.504181 4_4:-78227828 Msa0705500:CDS
CTTTGCGGCATTGGGGACCC+AGG 0.505091 4_4:+78229262 None:intergenic
AGTCTGTTTCCCACTGGGAA+AGG 0.505160 4_4:-78228307 Msa0705500:CDS
AAGAGAACAGCTTCATCTAC+TGG 0.505823 4_4:+78228261 None:intergenic
TGTACCGTAATAGCAATGAT+AGG 0.506838 4_4:-78227950 Msa0705500:CDS
GGAAATAATATGCAAGAGGA+TGG 0.510987 4_4:-78232222 Msa0705500:CDS
TGTACAAGCATGATCATGCC+GGG 0.511394 4_4:-78232650 Msa0705500:CDS
TAGTATTGACAGCTGATCCT+GGG 0.511525 4_4:-78227770 Msa0705500:CDS
AGCAAAGCATCTCTAACCTT+AGG 0.513775 4_4:+78232147 None:intergenic
TCCAGGAGTCTGTTTCCCAC+TGG 0.515754 4_4:-78228313 Msa0705500:intron
TGATGAGGAAGAATCTGAAA+AGG 0.516791 4_4:-78231911 Msa0705500:CDS
GGTTTATTTCAAAGTAGTCC+AGG 0.519923 4_4:-78231418 Msa0705500:CDS
CATACTGAACCTCCGAGTGC+TGG 0.520644 4_4:-78232345 Msa0705500:CDS
GAGGATTCTGATGATAATGA+TGG 0.521082 4_4:-78232441 Msa0705500:CDS
GCACTCTTGCGATCTTCAGT+TGG 0.521171 4_4:+78229112 None:intergenic
TGACACATCTTATGGGTTAG+TGG 0.523326 4_4:-78229143 Msa0705500:CDS
GAATGATTCTGAGGACAAAA+CGG 0.523740 4_4:-78231788 Msa0705500:CDS
AATCCATCTCAGTTCCGTAA+AGG 0.523781 4_4:-78229205 Msa0705500:CDS
GCCCCTTTACGGAACTGAGA+TGG 0.525443 4_4:+78229202 None:intergenic
CCAGGAGTCTGTTTCCCACT+GGG 0.526784 4_4:-78228312 Msa0705500:intron
TTGTACAAGCATGATCATGC+CGG 0.527442 4_4:-78232651 Msa0705500:CDS
GATGTCCAGATCGACTGCTC+AGG 0.529304 4_4:-78227928 Msa0705500:CDS
ATGTCCAAAACCTGATGAAG+AGG 0.529626 4_4:-78231638 Msa0705500:CDS
AATCGAATCAATTAGCGCGT+TGG 0.531149 4_4:+78233215 None:intergenic
AACATGACAGTGATCTGGAA+TGG 0.532257 4_4:-78227800 Msa0705500:CDS
GCATCTCTAACCTTAGGACT+TGG 0.534395 4_4:+78232153 None:intergenic
AGAAAGTAGAAGCGAAGATG+AGG 0.535822 4_4:-78231863 Msa0705500:CDS
ATAACTCTCAAGCCCTGTCA+AGG 0.535864 4_4:+78232590 None:intergenic
CGGAACTGAGATGGATTGAT+CGG 0.539725 4_4:+78229211 None:intergenic
AGATTGCATTGAAAGTGCAT+TGG 0.540262 4_4:-78232482 Msa0705500:CDS
GTGATTCTAGTGAAAATGGT+TGG 0.541443 4_4:-78232728 Msa0705500:CDS
CAGATTGCAGCTACTTTGAT+GGG 0.541632 4_4:-78232393 Msa0705500:CDS
GACGGTGATTCTGAAAAGGA+TGG 0.542643 4_4:-78232099 Msa0705500:CDS
CAGATACATGAGTCATTGCC+TGG 0.543756 4_4:+78227898 None:intergenic
GCACTCGGAGGTTCAGTATG+AGG 0.545618 4_4:+78232348 None:intergenic
ACATGACAGTGATCTGGAAT+GGG 0.546782 4_4:-78227799 Msa0705500:CDS
ATTGAAGATTCAGAGCTGCT+GGG 0.547015 4_4:-78231349 Msa0705500:CDS
AGTGGAAACACGGTATAATG+AGG 0.548562 4_4:-78227847 Msa0705500:CDS
CCGTCAATTGTTGCTCTGCG+AGG 0.549841 4_4:-78233047 Msa0705500:five_prime_UTR
TTGAACAAGGAAAGTTCAGA+AGG 0.551223 4_4:+78231508 None:intergenic
GTGGAAGATGAAGAGAAAGA+TGG 0.554836 4_4:-78231754 Msa0705500:CDS
TGTCGTCTTCAGGGTGCACA+CGG 0.556807 4_4:+78231476 None:intergenic
GAGGAAGAATCTGAAAAGGA+TGG 0.559190 4_4:-78231907 Msa0705500:CDS
GACTGCTCAGGCAATTGACC+AGG 0.559330 4_4:-78227916 Msa0705500:CDS
TCAGTATGAGGTCGTATCAA+AGG 0.562686 4_4:+78232360 None:intergenic
ATCACAAACTTATCCAATGA+CGG 0.573446 4_4:+78232528 None:intergenic
GAACAAACTCCAACGAGTCA+TGG 0.576648 4_4:+78229176 None:intergenic
GATGAAAATGACAAAGACTT+CGG 0.578623 4_4:+78232252 None:intergenic
GCGGTTACGCAGATGAACCC+AGG 0.583483 4_4:-78232779 Msa0705500:CDS
TCTCAGAAGCTTTCTCAAGG+TGG 0.584891 4_4:-78228050 Msa0705500:CDS
ATATCTTCCAACCTAACCCC+AGG 0.587620 4_4:+78227753 None:intergenic
AGATGGATTGATCGGTAATG+GGG 0.587699 4_4:+78229219 None:intergenic
ACGGTGATTCTGAAAAGGAT+GGG 0.588120 4_4:-78232098 Msa0705500:CDS
AACTTATCCAATGACGGACT+AGG 0.592275 4_4:+78232534 None:intergenic
GGACAGTACTAGAGGTGATG+AGG 0.592828 4_4:-78231926 Msa0705500:CDS
AATCTTCAATTGAACGGTCA+CGG 0.593996 4_4:+78231362 None:intergenic
GTCCATAATGGATAAGCCCA+AGG 0.594733 4_4:+78227984 None:intergenic
GTAGTTGAAATTGAAGCAAG+AGG 0.597125 4_4:+78233084 None:intergenic
TCCATTATGGACAGCACAAG+AGG 0.599316 4_4:-78227973 Msa0705500:CDS
GGGGTCAAAGAGGCAGAAAG+AGG 0.603341 4_4:-78231329 Msa0705500:intron
AGTTCTCAGAAGCTTTCTCA+AGG 0.604995 4_4:-78228053 Msa0705500:CDS
GATGTGTCCTCAAGTTCAGA+AGG 0.606355 4_4:-78231841 Msa0705500:CDS
TCCATCTCAGTTCCGTAAAG+GGG 0.606691 4_4:-78229203 Msa0705500:CDS
TCGCAAGAGTGCTCTTCAAG+AGG 0.608480 4_4:-78229101 Msa0705500:intron
ACTGAACCTCCGAGTGCTGG+AGG 0.608815 4_4:-78232342 Msa0705500:CDS
CAGAGCTGCTGGGGTCAAAG+AGG 0.609247 4_4:-78231339 Msa0705500:CDS
GGCAAAGGTGATGATGAGCT+CGG 0.610851 4_4:-78232051 Msa0705500:CDS
GATAGTAGGGACAGTACTAG+AGG 0.616025 4_4:-78231934 Msa0705500:CDS
TGTATACTCTTCCCTTGACA+GGG 0.616083 4_4:-78232602 Msa0705500:CDS
ACCGGGAAATAATATGCAAG+AGG 0.621704 4_4:-78232226 Msa0705500:CDS
TGAATCTGTCAGTGGAAACA+CGG 0.621890 4_4:-78227857 Msa0705500:CDS
TAACTCTCAAGCCCTGTCAA+GGG 0.621996 4_4:+78232591 None:intergenic
GCTCTGAATCTTCAATTGAA+CGG 0.622562 4_4:+78231356 None:intergenic
ATTGAAGAAGATACTGCCAA+TGG 0.623152 4_4:-78231544 Msa0705500:CDS
TGAGGAAGACGACAGAGATG+AGG 0.625957 4_4:+78233333 None:intergenic
TCCATAATGGATAAGCCCAA+GGG 0.626062 4_4:+78227985 None:intergenic
TTGCCACTGTACTTGGAACA+CGG 0.630176 4_4:+78227694 None:intergenic
TTTGAGGGAGGTGGTAACGG+TGG 0.631443 4_4:+78233274 None:intergenic
AGAAGATACTGCCAATGGCG+AGG 0.634359 4_4:-78231539 Msa0705500:CDS
GATACATGCCCTTTCCCAGT+GGG 0.635735 4_4:+78228298 None:intergenic
TTGAAGATTCAGAGCTGCTG+GGG 0.639576 4_4:-78231348 Msa0705500:CDS
TGTTAGCCTGAATCTGTCAG+TGG 0.639661 4_4:-78227865 Msa0705500:CDS
AGGGGCTTACCATGACTCGT+TGG 0.641373 4_4:-78229185 Msa0705500:CDS
AGGATTCTGATGATAATGAT+GGG 0.643851 4_4:-78232440 Msa0705500:CDS
CAGCTACTTTGATGGGTGAG+TGG 0.644007 4_4:-78232386 Msa0705500:CDS
TTGAAAAGCGTAGAAGCGCG+TGG 0.645712 4_4:+78233187 None:intergenic
TGACAAAGACTTCGGCGGTG+AGG 0.645891 4_4:+78232260 None:intergenic
GGATAGTAAGAATGATTCTG+AGG 0.647050 4_4:-78231797 Msa0705500:CDS
GCAAGAGGTGAAAGAATTTG+GGG 0.647800 4_4:+78233099 None:intergenic
AAAGCGTCTCCATTTGCCAA+AGG 0.648853 4_4:+78228023 None:intergenic
AAGTCAGCGGATAAAGATGA+CGG 0.652675 4_4:-78232117 Msa0705500:CDS
GTGGAAACACGGTATAATGA+GGG 0.653694 4_4:-78227846 Msa0705500:CDS
CGGTTACGCAGATGAACCCA+GGG 0.658304 4_4:-78232778 Msa0705500:CDS
AGTATTGACAGCTGATCCTG+GGG 0.661051 4_4:-78227769 Msa0705500:CDS
GATCAATGTACATGTAACAG+AGG 0.665912 4_4:-78228950 Msa0705500:CDS
GAGAGATTGTGTTAAAACGA+CGG 0.667494 4_4:+78233248 None:intergenic
ACAGAGGTTCAGAATACTGG+AGG 0.670222 4_4:-78228934 Msa0705500:intron
CGGTTATTAGGGTTCGCTCG+CGG 0.673119 4_4:-78232798 Msa0705500:CDS
CTATTCTCATCAGGAGACAG+CGG 0.673432 4_4:+78232195 None:intergenic
GCAAAGATAATCCCGCACCC+CGG 0.673856 4_4:+78232632 None:intergenic
CGATACATGCCCTTTCCCAG+TGG 0.674794 4_4:+78228297 None:intergenic
GAAAATGACAAAGACTTCGG+CGG 0.687367 4_4:+78232255 None:intergenic
TTGAGGATAAAGCACCACCT+CGG 0.687394 4_4:-78227731 Msa0705500:CDS
ATTGACGGTTCGAATTTCGG+AGG 0.691283 4_4:+78233062 None:intergenic
CCATAATGGATAAGCCCAAG+GGG 0.695536 4_4:+78227986 None:intergenic
GTATGAGGTCGTATCAAAGG+CGG 0.697048 4_4:+78232363 None:intergenic
AATTTGAATTGAGGAAACGA+AGG 0.698255 4_4:+78233133 None:intergenic
AATGAAAATAGCAATAACGG+TGG 0.702382 4_4:-78231439 Msa0705500:CDS
GTACAAGCATGATCATGCCG+GGG 0.711579 4_4:-78232649 Msa0705500:CDS
GATGGATTGATCGGTAATGG+GGG 0.711741 4_4:+78229220 None:intergenic
TCGCCGTGTTCCAAGTACAG+TGG 0.712754 4_4:-78227697 None:intergenic
CATAATGGATAAGCCCAAGG+GGG 0.768010 4_4:+78227987 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAATAAACAAGTTTT+AGG + chr4_4:78230153-78230172 None:intergenic 10.0%
!! AAAACAATTTAAATAAATGA+TGG - chr4_4:78231501-78231520 Msa0705500:CDS 10.0%
!!! TGGAATTTTTTTTTTTTTTT+TGG - chr4_4:78231966-78231985 Msa0705500:CDS 10.0%
!!! GATTTTTTAAGAAGTTATTT+CGG - chr4_4:78229217-78229236 Msa0705500:CDS 15.0%
!!! ATTTTTTAAGAAGTTATTTC+GGG - chr4_4:78229218-78229237 Msa0705500:CDS 15.0%
!! CTGAATATATATTAATCATT+TGG - chr4_4:78229734-78229753 Msa0705500:intron 15.0%
!!! TATACTAATTGTATTTTACA+GGG + chr4_4:78230026-78230045 None:intergenic 15.0%
!!! AAATTACATAGTATTTTCAA+CGG + chr4_4:78230320-78230339 None:intergenic 15.0%
!!! CATTAAATTAAAAAGTATCA+AGG - chr4_4:78230449-78230468 Msa0705500:intron 15.0%
!! TAGAAATATAAGAATAAGAA+AGG + chr4_4:78232054-78232073 None:intergenic 15.0%
!! TATCATAATAAAAGAAAAAG+TGG + chr4_4:78232660-78232679 None:intergenic 15.0%
!!! TTTTTGTTATAGTAATTTCA+AGG - chr4_4:78232952-78232971 Msa0705500:five_prime_UTR 15.0%
!! AGAAAGAGAATTTCTTTAAA+AGG - chr4_4:78229070-78229089 Msa0705500:intron 20.0%
!!! GTATACTAATTGTATTTTAC+AGG + chr4_4:78230027-78230046 None:intergenic 20.0%
!! AAATACAATTAGTATACGTT+TGG - chr4_4:78230030-78230049 Msa0705500:intron 20.0%
!! TAAAATATCTCCTTAACTTA+TGG + chr4_4:78230405-78230424 None:intergenic 20.0%
!!! ATAAGTTAAGGAGATATTTT+AGG - chr4_4:78230404-78230423 Msa0705500:intron 20.0%
!!! TTTATACCATCTTAAGTTTT+AGG + chr4_4:78230504-78230523 None:intergenic 20.0%
!! TATGAATATTGAATAGAAAG+GGG + chr4_4:78230964-78230983 None:intergenic 20.0%
!! CTATGAATATTGAATAGAAA+GGG + chr4_4:78230965-78230984 None:intergenic 20.0%
!!! TGCAATTTTATCTAGAATAA+CGG + chr4_4:78231313-78231332 None:intergenic 20.0%
!! AAGCTTAGCTTAAATTATTA+AGG + chr4_4:78231427-78231446 None:intergenic 20.0%
!!! AATATTTTTTTTTGAAAGCG+TGG - chr4_4:78232216-78232235 Msa0705500:CDS 20.0%
!! ATTTCTTATCATATATATCC+AGG - chr4_4:78232706-78232725 Msa0705500:CDS 20.0%
! AAGGTTTATATGGAAAAAGT+AGG - chr4_4:78228134-78228153 Msa0705500:intron 25.0%
! GATGATAGTAGATTGAAAAA+TGG - chr4_4:78228213-78228232 Msa0705500:CDS 25.0%
!!! GTAAAAGTCAAGTTTTGAAT+AGG - chr4_4:78228716-78228735 Msa0705500:intron 25.0%
! TTAAATATCCTATTCTCATC+AGG + chr4_4:78228853-78228872 None:intergenic 25.0%
!!! TTATTGCTATTTTCATTGAC+TGG + chr4_4:78229594-78229613 None:intergenic 25.0%
! GTCAATGAAAATAGCAATAA+CGG - chr4_4:78229594-78229613 Msa0705500:intron 25.0%
!! AATCATTTGGTTTACTTCTA+TGG - chr4_4:78229747-78229766 Msa0705500:intron 25.0%
! TTTACTTCTATGGTAGAATT+CGG - chr4_4:78229757-78229776 Msa0705500:intron 25.0%
!!! AACATACTTGTTATCTGAAA+AGG + chr4_4:78229874-78229893 None:intergenic 25.0%
!!! TTTGTTCTTTTAATTTCCAC+TGG - chr4_4:78229917-78229936 Msa0705500:intron 25.0%
!! TTTTACAGGGACTAAAAAAT+GGG + chr4_4:78230013-78230032 None:intergenic 25.0%
!! ATTTTACAGGGACTAAAAAA+TGG + chr4_4:78230014-78230033 None:intergenic 25.0%
!!! ATGTTTTTAGTCCTTTAAAG+AGG + chr4_4:78230058-78230077 None:intergenic 25.0%
!!! ACATGTAGTTTTGTATTTAC+AGG - chr4_4:78230074-78230093 Msa0705500:intron 25.0%
!!! CATGTAGTTTTGTATTTACA+GGG - chr4_4:78230075-78230094 Msa0705500:intron 25.0%
! TATTTACAGGGATTAAAATG+CGG - chr4_4:78230087-78230106 Msa0705500:intron 25.0%
!!! CAGTTTTTTAGAGTTAAGTT+AGG - chr4_4:78230761-78230780 Msa0705500:intron 25.0%
! GCTATGAATATTGAATAGAA+AGG + chr4_4:78230966-78230985 None:intergenic 25.0%
! TCAATTCAATAAGACTAAAC+AGG + chr4_4:78231082-78231101 None:intergenic 25.0%
! AATTGACAAATATGTTCTCT+AGG - chr4_4:78231096-78231115 Msa0705500:intron 25.0%
!!! AAATATGTTCTCTAGGATTA+GGG - chr4_4:78231103-78231122 Msa0705500:intron 25.0%
! AATCTAATGTGATGAGTAAA+AGG + chr4_4:78231132-78231151 None:intergenic 25.0%
!!! TTCCTAAAAACGTGTTATTT+AGG + chr4_4:78231227-78231246 None:intergenic 25.0%
!! ACAATTAAGTACTTTTGTGT+TGG - chr4_4:78231361-78231380 Msa0705500:CDS 25.0%
!! CAATTAAGTACTTTTGTGTT+GGG - chr4_4:78231362-78231381 Msa0705500:CDS 25.0%
!! AATTAAGTACTTTTGTGTTG+GGG - chr4_4:78231363-78231382 Msa0705500:CDS 25.0%
!! TTAAGCTAAGCTTTTATTGA+AGG - chr4_4:78231434-78231453 Msa0705500:CDS 25.0%
!! ATCTGAGTCATGTTAAATTT+TGG - chr4_4:78232149-78232168 Msa0705500:CDS 25.0%
! TGTTATACATTGAAATGAAC+AGG + chr4_4:78232312-78232331 None:intergenic 25.0%
!!! ATTTCACTATTTTTTCAGGA+GGG + chr4_4:78232367-78232386 None:intergenic 25.0%
!!! AATTTCACTATTTTTTCAGG+AGG + chr4_4:78232368-78232387 None:intergenic 25.0%
!!! GGAAATTTCACTATTTTTTC+AGG + chr4_4:78232371-78232390 None:intergenic 25.0%
! AATACACATGTATCGAAATT+GGG + chr4_4:78232392-78232411 None:intergenic 25.0%
! AAATACACATGTATCGAAAT+TGG + chr4_4:78232393-78232412 None:intergenic 25.0%
!!! TCATTGATGTAGTTTTTCAA+TGG - chr4_4:78232504-78232523 Msa0705500:CDS 25.0%
! TACAGTAAAGAACAAAAAAC+TGG + chr4_4:78232599-78232618 None:intergenic 25.0%
! GTATTATTCAAGTAATACCT+TGG + chr4_4:78232859-78232878 None:intergenic 25.0%
! ATTACTTGAATAATACTCCT+CGG - chr4_4:78232863-78232882 Msa0705500:five_prime_UTR 25.0%
!!! TTGTTACTTTTTGAAGAGTG+AGG + chr4_4:78227724-78227743 None:intergenic 30.0%
AATTTGAATTGAGGAAACGA+AGG + chr4_4:78227906-78227925 None:intergenic 30.0%
!!! CTGTAATTTTGATTTGTCAG+AGG - chr4_4:78228084-78228103 Msa0705500:intron 30.0%
!!! TTTTGATTTGTCAGAGGATT+AGG - chr4_4:78228090-78228109 Msa0705500:intron 30.0%
!! TTTGATTTGTCAGAGGATTA+GGG - chr4_4:78228091-78228110 Msa0705500:intron 30.0%
! GGGTTTTTACAAGGTTTATA+TGG - chr4_4:78228124-78228143 Msa0705500:intron 30.0%
TAGTAGATTGAAAAATGGTG+CGG - chr4_4:78228218-78228237 Msa0705500:CDS 30.0%
ACTAGTGATTCTAGTGAAAA+TGG - chr4_4:78228304-78228323 Msa0705500:CDS 30.0%
!!! ATTCGTCGTTTTTTTGTGAA+TGG - chr4_4:78228347-78228366 Msa0705500:intron 30.0%
ATCACAAACTTATCCAATGA+CGG + chr4_4:78228511-78228530 None:intergenic 30.0%
! AGGATTCTGATGATAATGAT+GGG - chr4_4:78228596-78228615 Msa0705500:intron 30.0%
! ATGATAATGATGGGATTAGT+AGG - chr4_4:78228605-78228624 Msa0705500:intron 30.0%
GATGAAAATGACAAAGACTT+CGG + chr4_4:78228787-78228806 None:intergenic 30.0%
!!! TTTGTCATTTTCATCTTCAC+CGG - chr4_4:78228792-78228811 Msa0705500:intron 30.0%
!!! TTTGCTTTTTAGAAAGTCAG+CGG - chr4_4:78228906-78228925 Msa0705500:intron 30.0%
!! TTCAAGAGACTTTTAAGAGA+TGG - chr4_4:78228964-78228983 Msa0705500:CDS 30.0%
!!! GAAATGCATCACGAATTTTT+TGG + chr4_4:78229011-78229030 None:intergenic 30.0%
! TTCGTGATGCATTTCATTTT+CGG - chr4_4:78229016-78229035 Msa0705500:intron 30.0%
AAAGGTTCTTAAGAGATAGT+AGG - chr4_4:78229088-78229107 Msa0705500:intron 30.0%
AAGGTTCTTAAGAGATAGTA+GGG - chr4_4:78229089-78229108 Msa0705500:intron 30.0%
AAAAGGATGGTTTCTTTCAA+AGG - chr4_4:78229142-78229161 Msa0705500:CDS 30.0%
AAAAAATCCTTCTGAACTTG+AGG + chr4_4:78229205-78229224 None:intergenic 30.0%
ATGAAGAGGATGAAAAAGAT+GGG - chr4_4:78229412-78229431 Msa0705500:intron 30.0%
!! ATGAAAAAGATGGGTTTTTC+CGG - chr4_4:78229421-78229440 Msa0705500:intron 30.0%
ATTTATCCCTGAAGAATTTC+CGG + chr4_4:78229443-78229462 None:intergenic 30.0%
ATTCTTCAGGGATAAATTTG+AGG - chr4_4:78229446-78229465 Msa0705500:intron 30.0%
AATGAAAATAGCAATAACGG+TGG - chr4_4:78229597-78229616 Msa0705500:intron 30.0%
TGTAAACTGCAAAGTATGAA+TGG - chr4_4:78229782-78229801 Msa0705500:intron 30.0%
GTAAACTGCAAAGTATGAAT+GGG - chr4_4:78229783-78229802 Msa0705500:intron 30.0%
! CAGACATTAAGCAACTTTTA+AGG + chr4_4:78229849-78229868 None:intergenic 30.0%
AAGAACAAAAGCAATGTCAA+TGG + chr4_4:78229906-78229925 None:intergenic 30.0%
!!! TCTTTTAATTTCCACTGGAT+TGG - chr4_4:78229922-78229941 Msa0705500:intron 30.0%
AAATTCGCTATATTTGTAGG+TGG + chr4_4:78229974-78229993 None:intergenic 30.0%
ACGAAATTCGCTATATTTGT+AGG + chr4_4:78229977-78229996 None:intergenic 30.0%
ATTTACAGGGATTAAAATGC+GGG - chr4_4:78230088-78230107 Msa0705500:intron 30.0%
AAATAAAGAGTTATGGCTCT+TGG + chr4_4:78230177-78230196 None:intergenic 30.0%
!! AGAGCCATAACTCTTTATTT+TGG - chr4_4:78230177-78230196 Msa0705500:intron 30.0%
CCATATATCTATTCGACATA+TGG + chr4_4:78230224-78230243 None:intergenic 30.0%
CCATATGTCGAATAGATATA+TGG - chr4_4:78230221-78230240 Msa0705500:intron 30.0%
TAAAAGGAAACCAGTATCAT+TGG + chr4_4:78230358-78230377 None:intergenic 30.0%
TAATGACACTCCATAAGTTA+AGG - chr4_4:78230392-78230411 Msa0705500:intron 30.0%
CATAGACCTAAAACTTAAGA+TGG - chr4_4:78230495-78230514 Msa0705500:intron 30.0%
AAGAACAGATCAAGTATACT+AGG + chr4_4:78230534-78230553 None:intergenic 30.0%
TAGTATACTTGATCTGTTCT+TGG - chr4_4:78230533-78230552 Msa0705500:intron 30.0%
AGTATACTTGATCTGTTCTT+GGG - chr4_4:78230534-78230553 Msa0705500:intron 30.0%
! AAGACCAAACATCTAAAACA+TGG + chr4_4:78230590-78230609 None:intergenic 30.0%
!! AAAAACTGACTTGTAAAGTG+AGG + chr4_4:78230749-78230768 None:intergenic 30.0%
!! TAATTTGGTCTTATTGCAAC+AGG - chr4_4:78230887-78230906 Msa0705500:intron 30.0%
!! AATTTGGTCTTATTGCAACA+GGG - chr4_4:78230888-78230907 Msa0705500:intron 30.0%
TATTATTGGGAAAAGTCAGT+TGG - chr4_4:78230914-78230933 Msa0705500:intron 30.0%
ATTATTGGGAAAAGTCAGTT+GGG - chr4_4:78230915-78230934 Msa0705500:intron 30.0%
!!! CAAAACCAAATTTTTTCACG+TGG - chr4_4:78230992-78231011 Msa0705500:intron 30.0%
GTTAACCACGTGAAAAAATT+TGG + chr4_4:78231000-78231019 None:intergenic 30.0%
TTTGATAAGAATGACAACCA+GGG + chr4_4:78231042-78231061 None:intergenic 30.0%
ATTTGATAAGAATGACAACC+AGG + chr4_4:78231043-78231062 None:intergenic 30.0%
!! CAAATATGTTCTCTAGGATT+AGG - chr4_4:78231102-78231121 Msa0705500:intron 30.0%
!! CTAAAAACGTGTTATTTAGG+TGG + chr4_4:78231224-78231243 None:intergenic 30.0%
! CACCTAAATAACACGTTTTT+AGG - chr4_4:78231222-78231241 Msa0705500:intron 30.0%
ATTGCAGCACATTGTTAAAA+CGG - chr4_4:78231332-78231351 Msa0705500:CDS 30.0%
!!! CTTTTATTGAAGGTGTCTTT+GGG - chr4_4:78231444-78231463 Msa0705500:CDS 30.0%
GGAGTTAATTCACAAATATG+TGG - chr4_4:78231465-78231484 Msa0705500:CDS 30.0%
TTATTTCACGCTTGATTACA+TGG - chr4_4:78231540-78231559 Msa0705500:CDS 30.0%
! ATGTATCTGATTCTAGTTGT+AGG - chr4_4:78231587-78231606 Msa0705500:CDS 30.0%
ATTAAAAATAACCCCACATG+AGG + chr4_4:78231737-78231756 None:intergenic 30.0%
AACACAGTTATGGAATACAT+TGG + chr4_4:78232024-78232043 None:intergenic 30.0%
TGAATCTAAACCAAGAAATG+TGG + chr4_4:78232268-78232287 None:intergenic 30.0%
ATTTCTTGGTTTAGATTCAG+AGG - chr4_4:78232269-78232288 Msa0705500:CDS 30.0%
! GCTTGAAAGAGCAATTATTT+TGG + chr4_4:78232436-78232455 None:intergenic 30.0%
TCTACAGATCCTTATAGAAA+TGG + chr4_4:78232544-78232563 None:intergenic 30.0%
! ACATCCTATCATTGCTATTA+CGG + chr4_4:78233093-78233112 None:intergenic 30.0%
! AGATTCAGGCTAACAAATTT+TGG + chr4_4:78233166-78233185 None:intergenic 30.0%
GAGAGATTGTGTTAAAACGA+CGG + chr4_4:78227791-78227810 None:intergenic 35.0%
TGAAAGAATTTGGGGATTGT+TGG + chr4_4:78227932-78227951 None:intergenic 35.0%
AGCAAGAGGTGAAAGAATTT+GGG + chr4_4:78227941-78227960 None:intergenic 35.0%
AAGCAAGAGGTGAAAGAATT+TGG + chr4_4:78227942-78227961 None:intergenic 35.0%
GTAGTTGAAATTGAAGCAAG+AGG + chr4_4:78227955-78227974 None:intergenic 35.0%
ACAATTGACGGTTCGAATTT+CGG + chr4_4:78227980-78227999 None:intergenic 35.0%
TGTACAAGCTACAAAGAATC+TGG + chr4_4:78228038-78228057 None:intergenic 35.0%
TGAAAAATGGTGCGGTTATT+AGG - chr4_4:78228226-78228245 Msa0705500:CDS 35.0%
GAAAAATGGTGCGGTTATTA+GGG - chr4_4:78228227-78228246 Msa0705500:CDS 35.0%
TTTCACTAGAATCACTAGTC+AGG + chr4_4:78228303-78228322 None:intergenic 35.0%
GTGATTCTAGTGAAAATGGT+TGG - chr4_4:78228308-78228327 Msa0705500:CDS 35.0%
!! GTGAAAATGGTTGGCTTATT+AGG - chr4_4:78228317-78228336 Msa0705500:intron 35.0%
! AGATTGCATTGAAAGTGCAT+TGG - chr4_4:78228554-78228573 Msa0705500:intron 35.0%
!!! GAAAGTGCATTGGTTTTTGA+TGG - chr4_4:78228564-78228583 Msa0705500:intron 35.0%
! GAGGATTCTGATGATAATGA+TGG - chr4_4:78228595-78228614 Msa0705500:intron 35.0%
!!! TTGTCATTTTCATCTTCACC+GGG - chr4_4:78228793-78228812 Msa0705500:intron 35.0%
TCCTCTTGCATATTATTTCC+CGG + chr4_4:78228814-78228833 None:intergenic 35.0%
GGAAATAATATGCAAGAGGA+TGG - chr4_4:78228814-78228833 Msa0705500:intron 35.0%
AAAGTTTATGCCAAGTCCTA+AGG - chr4_4:78228873-78228892 Msa0705500:intron 35.0%
!! AGACTTTTAAGAGATGGCAA+AGG - chr4_4:78228970-78228989 Msa0705500:intron 35.0%
ATTCTCTTTCTCAGAGTCTA+AGG + chr4_4:78229061-78229080 None:intergenic 35.0%
TGATGAGGAAGAATCTGAAA+AGG - chr4_4:78229125-78229144 Msa0705500:CDS 35.0%
GGATAGTAAGAATGATTCTG+AGG - chr4_4:78229239-78229258 Msa0705500:CDS 35.0%
! GAATGATTCTGAGGACAAAA+CGG - chr4_4:78229248-78229267 Msa0705500:CDS 35.0%
! CAAAACGGATTCAAAAACAG+TGG - chr4_4:78229263-78229282 Msa0705500:CDS 35.0%
! GACTTTTCCGAAAGTTTTTC+CGG - chr4_4:78229304-78229323 Msa0705500:intron 35.0%
! ACTTTTCCGAAAGTTTTTCC+GGG - chr4_4:78229305-78229324 Msa0705500:intron 35.0%
ATTTCTCCCGGAAAAACTTT+CGG + chr4_4:78229314-78229333 None:intergenic 35.0%
TCTTATCTTCGAATTTCTCC+CGG + chr4_4:78229326-78229345 None:intergenic 35.0%
GGACATTTCTCTTCAGAATT+AGG + chr4_4:78229384-78229403 None:intergenic 35.0%
!! TCTTTTTCATCCTCTTCATC+AGG + chr4_4:78229411-78229430 None:intergenic 35.0%
GATGAAGAGGATGAAAAAGA+TGG - chr4_4:78229411-78229430 Msa0705500:intron 35.0%
! GTTTTTCCGGAAATTCTTCA+GGG - chr4_4:78229434-78229453 Msa0705500:intron 35.0%
ATTGAAGAAGATACTGCCAA+TGG - chr4_4:78229492-78229511 Msa0705500:intron 35.0%
TTGAACAAGGAAAGTTCAGA+AGG + chr4_4:78229531-78229550 None:intergenic 35.0%
CTGAACTTTCCTTGTTCAAA+AGG - chr4_4:78229532-78229551 Msa0705500:intron 35.0%
GGTTTATTTCAAAGTAGTCC+AGG - chr4_4:78229618-78229637 Msa0705500:intron 35.0%
CACGGTCTTTGAACAATTTA+CGG + chr4_4:78229659-78229678 None:intergenic 35.0%
AATCTTCAATTGAACGGTCA+CGG + chr4_4:78229677-78229696 None:intergenic 35.0%
! GCTCTGAATCTTCAATTGAA+CGG + chr4_4:78229683-78229702 None:intergenic 35.0%
! CGAAGTGTCTGTGTATATAT+TGG + chr4_4:78229810-78229829 None:intergenic 35.0%
GGGACTAAAAAATGGGTATA+AGG + chr4_4:78230006-78230025 None:intergenic 35.0%
! TACGTTTGGTTCCTCTTTAA+AGG - chr4_4:78230044-78230063 Msa0705500:intron 35.0%
AGGGCCAAAATAAAGAGTTA+TGG + chr4_4:78230184-78230203 None:intergenic 35.0%
GTCAACTTAACTCCACAAAA+TGG + chr4_4:78230298-78230317 None:intergenic 35.0%
!!! TGATACTGGTTTCCTTTTAC+AGG - chr4_4:78230359-78230378 Msa0705500:intron 35.0%
TATGTACTCTGTCCTGTAAA+AGG + chr4_4:78230374-78230393 None:intergenic 35.0%
!! TCGTCCATGTTTTAGATGTT+TGG - chr4_4:78230583-78230602 Msa0705500:intron 35.0%
ATGGCATATGTAATGCTTGT+AGG - chr4_4:78230712-78230731 Msa0705500:intron 35.0%
TGACGTAAACTCTTAGGTTT+CGG + chr4_4:78230788-78230807 None:intergenic 35.0%
AGACTATGACGTAAACTCTT+AGG + chr4_4:78230794-78230813 None:intergenic 35.0%
AAGCATTCTAATGTTCAGTG+TGG + chr4_4:78230828-78230847 None:intergenic 35.0%
!! TTGCAACAGGGTGTTATTAT+TGG - chr4_4:78230900-78230919 Msa0705500:intron 35.0%
!! TGCAACAGGGTGTTATTATT+GGG - chr4_4:78230901-78230920 Msa0705500:intron 35.0%
TAAGACTAAACAGGCAATCT+GGG + chr4_4:78231073-78231092 None:intergenic 35.0%
ATAAGACTAAACAGGCAATC+TGG + chr4_4:78231074-78231093 None:intergenic 35.0%
TTAGGAAGTTTCCCATATCA+TGG - chr4_4:78231240-78231259 Msa0705500:intron 35.0%
! AGGCTCTAATACCATGATAT+GGG + chr4_4:78231254-78231273 None:intergenic 35.0%
! TAGGCTCTAATACCATGATA+TGG + chr4_4:78231255-78231274 None:intergenic 35.0%
AGCCTAATGATCAAGTATAC+AGG - chr4_4:78231269-78231288 Msa0705500:intron 35.0%
GTCCTGTATACTTGATCATT+AGG + chr4_4:78231274-78231293 None:intergenic 35.0%
TTGCAGCACATTGTTAAAAC+GGG - chr4_4:78231333-78231352 Msa0705500:CDS 35.0%
!!! GCTTTTATTGAAGGTGTCTT+TGG - chr4_4:78231443-78231462 Msa0705500:CDS 35.0%
! TGATTACATGGCATTGGAAA+TGG - chr4_4:78231552-78231571 Msa0705500:CDS 35.0%
GCACAAAAAACGGGATATAT+TGG + chr4_4:78231715-78231734 None:intergenic 35.0%
! ATTTTTCACTTTGCGGCATT+GGG + chr4_4:78231785-78231804 None:intergenic 35.0%
TCACTATGTGACACATCTTA+TGG - chr4_4:78231885-78231904 Msa0705500:CDS 35.0%
CACTATGTGACACATCTTAT+GGG - chr4_4:78231886-78231905 Msa0705500:CDS 35.0%
!! CTCTTCAAGAGGTTATTTTC+TGG - chr4_4:78231946-78231965 Msa0705500:CDS 35.0%
GATCAATGTACATGTAACAG+AGG - chr4_4:78232086-78232105 Msa0705500:CDS 35.0%
!!! GCAATTATTTTGGCATACCT+CGG + chr4_4:78232426-78232445 None:intergenic 35.0%
TACATCAATGACAGATGTCT+GGG + chr4_4:78232495-78232514 None:intergenic 35.0%
ACTAGCAGTCCATTTCTATA+AGG - chr4_4:78232532-78232551 Msa0705500:CDS 35.0%
AAGCTGTTCTCTTGAATTCT+CGG - chr4_4:78232785-78232804 Msa0705500:CDS 35.0%
ACTTCGATGCATATCATGTA+AGG + chr4_4:78232820-78232839 None:intergenic 35.0%
!!! TTTTGAGATGTGAAATGCCA+AGG - chr4_4:78232839-78232858 Msa0705500:five_prime_UTR 35.0%
TGTACCGTAATAGCAATGAT+AGG - chr4_4:78233086-78233105 Msa0705500:five_prime_UTR 35.0%
! TTAAAACGACGGCGTTTTGA+GGG + chr4_4:78227780-78227799 None:intergenic 40.0%
AATCAATTAGCGCGTTGGAT+TGG + chr4_4:78227819-78227838 None:intergenic 40.0%
AATCGAATCAATTAGCGCGT+TGG + chr4_4:78227824-78227843 None:intergenic 40.0%
TGTTGGCGGAATTTGAATTG+AGG + chr4_4:78227915-78227934 None:intergenic 40.0%
AAGAATTTGGGGATTGTTGG+CGG + chr4_4:78227929-78227948 None:intergenic 40.0%
GCAAGAGGTGAAAGAATTTG+GGG + chr4_4:78227940-78227959 None:intergenic 40.0%
! TGTCAGAGGATTAGGGTTTT+CGG - chr4_4:78228098-78228117 Msa0705500:intron 40.0%
! TTTCGGTGAGGGTTTTTACA+AGG - chr4_4:78228115-78228134 Msa0705500:intron 40.0%
GACTTTGACTCAATTTCCCT+GGG + chr4_4:78228277-78228296 None:intergenic 40.0%
TGACTTTGACTCAATTTCCC+TGG + chr4_4:78228278-78228297 None:intergenic 40.0%
TTGTACAAGCATGATCATGC+CGG - chr4_4:78228385-78228404 Msa0705500:intron 40.0%
ATGTATACTCTTCCCTTGAC+AGG - chr4_4:78228433-78228452 Msa0705500:intron 40.0%
TGTATACTCTTCCCTTGACA+GGG - chr4_4:78228434-78228453 Msa0705500:intron 40.0%
!! AACTTATCCAATGACGGACT+AGG + chr4_4:78228505-78228524 None:intergenic 40.0%
CAATGCAATCTTAAGCGACT+TGG + chr4_4:78228545-78228564 None:intergenic 40.0%
!!! AGTGCATTGGTTTTTGATGG+CGG - chr4_4:78228567-78228586 Msa0705500:intron 40.0%
! TGATGGGATTAGTAGGATTC+AGG - chr4_4:78228612-78228631 Msa0705500:intron 40.0%
! TCAGATTGCAGCTACTTTGA+TGG - chr4_4:78228642-78228661 Msa0705500:intron 40.0%
! CAGATTGCAGCTACTTTGAT+GGG - chr4_4:78228643-78228662 Msa0705500:intron 40.0%
TCAGTATGAGGTCGTATCAA+AGG + chr4_4:78228679-78228698 None:intergenic 40.0%
GAAAATGACAAAGACTTCGG+CGG + chr4_4:78228784-78228803 None:intergenic 40.0%
ACCGGGAAATAATATGCAAG+AGG - chr4_4:78228810-78228829 Msa0705500:intron 40.0%
! AGCAAAGCATCTCTAACCTT+AGG + chr4_4:78228892-78228911 None:intergenic 40.0%
AAGTCAGCGGATAAAGATGA+CGG - chr4_4:78228919-78228938 Msa0705500:intron 40.0%
! AGATGACGGTGATTCTGAAA+AGG - chr4_4:78228933-78228952 Msa0705500:intron 40.0%
! ACGGTGATTCTGAAAAGGAT+GGG - chr4_4:78228938-78228957 Msa0705500:CDS 40.0%
! AGAGTCTAAGGCATCTTTCT+CGG + chr4_4:78229049-78229068 None:intergenic 40.0%
GAGGAAGAATCTGAAAAGGA+TGG - chr4_4:78229129-78229148 Msa0705500:CDS 40.0%
AGAAAGTAGAAGCGAAGATG+AGG - chr4_4:78229173-78229192 Msa0705500:CDS 40.0%
GTGGAAGATGAAGAGAAAGA+TGG - chr4_4:78229282-78229301 Msa0705500:intron 40.0%
ATGTCCAAAACCTGATGAAG+AGG - chr4_4:78229398-78229417 Msa0705500:intron 40.0%
! TCATCCTCTTCATCAGGTTT+TGG + chr4_4:78229405-78229424 None:intergenic 40.0%
! GGTTTTTCCGGAAATTCTTC+AGG - chr4_4:78229433-78229452 Msa0705500:intron 40.0%
! ACGGAATAGCCTTTTGAACA+AGG + chr4_4:78229544-78229563 None:intergenic 40.0%
!! GACTACTTTTGTCGTCTTCA+GGG + chr4_4:78229572-78229591 None:intergenic 40.0%
CGGAAAAAATTCTCTGTACC+TGG + chr4_4:78229639-78229658 None:intergenic 40.0%
AATTGAAGATTCAGAGCTGC+TGG - chr4_4:78229686-78229705 Msa0705500:intron 40.0%
ATTGAAGATTCAGAGCTGCT+GGG - chr4_4:78229687-78229706 Msa0705500:intron 40.0%
TATATTTGTAGGTGGAGGGA+GGG + chr4_4:78229966-78229985 None:intergenic 40.0%
TCGCTATATTTGTAGGTGGA+GGG + chr4_4:78229970-78229989 None:intergenic 40.0%
TTCGCTATATTTGTAGGTGG+AGG + chr4_4:78229971-78229990 None:intergenic 40.0%
GGCTCAACATTAACAACGAA+GGG + chr4_4:78230203-78230222 None:intergenic 40.0%
TGGCTCAACATTAACAACGA+AGG + chr4_4:78230204-78230223 None:intergenic 40.0%
GTCGAATAGATATATGGCCT+AGG - chr4_4:78230227-78230246 Msa0705500:intron 40.0%
AGATATATGGCCTAGGTACT+AGG - chr4_4:78230234-78230253 Msa0705500:intron 40.0%
ACAAACACTACCTAGTACCT+AGG + chr4_4:78230247-78230266 None:intergenic 40.0%
CTAGGTAGTGTTTGTAAGCT+AGG - chr4_4:78230252-78230271 Msa0705500:intron 40.0%
CAAAATGGTCATGAAAGGTG+AGG + chr4_4:78230283-78230302 None:intergenic 40.0%
! CACCTTTCATGACCATTTTG+TGG - chr4_4:78230283-78230302 Msa0705500:intron 40.0%
CTCCACAAAATGGTCATGAA+AGG + chr4_4:78230288-78230307 None:intergenic 40.0%
CCAGTATCATTGGAATGAAC+AGG + chr4_4:78230348-78230367 None:intergenic 40.0%
CCTGTTCATTCCAATGATAC+TGG - chr4_4:78230345-78230364 Msa0705500:intron 40.0%
! TCTAAAACATGGACGAATGC+AGG + chr4_4:78230579-78230598 None:intergenic 40.0%
CATTGAGTGTGTGGAAAACA+GGG + chr4_4:78230640-78230659 None:intergenic 40.0%
ACATTGAGTGTGTGGAAAAC+AGG + chr4_4:78230641-78230660 None:intergenic 40.0%
! TCTCACGTCGATTAGAGATA+TGG - chr4_4:78230693-78230712 Msa0705500:intron 40.0%
TATGTAATGCTTGTAGGACG+TGG - chr4_4:78230718-78230737 Msa0705500:intron 40.0%
ATGTAATGCTTGTAGGACGT+GGG - chr4_4:78230719-78230738 Msa0705500:intron 40.0%
AATTCCTAGACATGCAGTGA+AGG - chr4_4:78230851-78230870 Msa0705500:intron 40.0%
GGTGGTCGTATAGCTTAATT+TGG - chr4_4:78230872-78230891 Msa0705500:intron 40.0%
AAGTCAGTTGGGTTCAAGAA+TGG - chr4_4:78230926-78230945 Msa0705500:intron 40.0%
CATAAAATGACAGTCATCCC+TGG - chr4_4:78231022-78231041 Msa0705500:intron 40.0%
!!! TTACTTTTGCAGAAGCATCC+TGG - chr4_4:78231756-78231775 Msa0705500:CDS 40.0%
!!! TACTTTTGCAGAAGCATCCT+GGG - chr4_4:78231757-78231776 Msa0705500:CDS 40.0%
! TTTTTCACTTTGCGGCATTG+GGG + chr4_4:78231784-78231803 None:intergenic 40.0%
! GATTTTTCACTTTGCGGCAT+TGG + chr4_4:78231786-78231805 None:intergenic 40.0%
! GTGCTCGATTTTTCACTTTG+CGG + chr4_4:78231792-78231811 None:intergenic 40.0%
!! AGATGGATTGATCGGTAATG+GGG + chr4_4:78231820-78231839 None:intergenic 40.0%
!! GAGATGGATTGATCGGTAAT+GGG + chr4_4:78231821-78231840 None:intergenic 40.0%
!! TGAGATGGATTGATCGGTAA+TGG + chr4_4:78231822-78231841 None:intergenic 40.0%
AATCCATCTCAGTTCCGTAA+AGG - chr4_4:78231831-78231850 Msa0705500:CDS 40.0%
ATCCATCTCAGTTCCGTAAA+GGG - chr4_4:78231832-78231851 Msa0705500:CDS 40.0%
!! TGACACATCTTATGGGTTAG+TGG - chr4_4:78231893-78231912 Msa0705500:CDS 40.0%
AGGTGTCAGAAACACAGTTA+TGG + chr4_4:78232034-78232053 None:intergenic 40.0%
GTAACAGAGGTTCAGAATAC+TGG - chr4_4:78232099-78232118 Msa0705500:CDS 40.0%
TTTGTACATTTCAAACGCGC+AGG - chr4_4:78232191-78232210 Msa0705500:CDS 40.0%
AGCAGTAATGCCACATTTCT+TGG - chr4_4:78232255-78232274 Msa0705500:CDS 40.0%
GAAGAACTGCTTCTAACAAC+AGG + chr4_4:78232345-78232364 None:intergenic 40.0%
!! TGTATTTTTGTTGCCTTCCG+AGG - chr4_4:78232406-78232425 Msa0705500:CDS 40.0%
!!! TTATTTTGGCATACCTCGGA+AGG + chr4_4:78232422-78232441 None:intergenic 40.0%
CTACATCAATGACAGATGTC+TGG + chr4_4:78232496-78232515 None:intergenic 40.0%
AAAGTGGTAACTTGATCTGC+AGG + chr4_4:78232644-78232663 None:intergenic 40.0%
AAGAGAACAGCTTCATCTAC+TGG + chr4_4:78232778-78232797 None:intergenic 40.0%
AGCTGTTCTCTTGAATTCTC+GGG - chr4_4:78232786-78232805 Msa0705500:CDS 40.0%
TACTACTCTTCACAATACCG+AGG + chr4_4:78232883-78232902 None:intergenic 40.0%
! TTGAGAAAGCTTCTGAGAAC+TGG + chr4_4:78232984-78233003 None:intergenic 40.0%
AGTTCTCAGAAGCTTTCTCA+AGG - chr4_4:78232983-78233002 Msa0705500:five_prime_UTR 40.0%
TTCTCAAGGTGGAATTCCTT+TGG - chr4_4:78232997-78233016 Msa0705500:five_prime_UTR 40.0%
!! TCCATAATGGATAAGCCCAA+GGG + chr4_4:78233054-78233073 None:intergenic 40.0%
TGAATCTGTCAGTGGAAACA+CGG - chr4_4:78233179-78233198 Msa0705500:five_prime_UTR 40.0%
AGTGGAAACACGGTATAATG+AGG - chr4_4:78233189-78233208 Msa0705500:five_prime_UTR 40.0%
GTGGAAACACGGTATAATGA+GGG - chr4_4:78233190-78233209 Msa0705500:five_prime_UTR 40.0%
AACATGACAGTGATCTGGAA+TGG - chr4_4:78233236-78233255 Msa0705500:five_prime_UTR 40.0%
! ACATGACAGTGATCTGGAAT+GGG - chr4_4:78233237-78233256 Msa0705500:five_prime_UTR 40.0%
!! TAGTATTGACAGCTGATCCT+GGG - chr4_4:78233266-78233285 Msa0705500:five_prime_UTR 40.0%
!! GGTTAGGTTGGAAGATATTG+AGG - chr4_4:78233288-78233307 Msa0705500:five_prime_UTR 40.0%
! GTTAAAACGACGGCGTTTTG+AGG + chr4_4:78227781-78227800 None:intergenic 45.0%
ATTGACGGTTCGAATTTCGG+AGG + chr4_4:78227977-78227996 None:intergenic 45.0%
! AGGATTAGGGTTTTCGGTGA+GGG - chr4_4:78228104-78228123 Msa0705500:intron 45.0%
TGTACAAGCATGATCATGCC+GGG - chr4_4:78228386-78228405 Msa0705500:intron 45.0%
TAACTCTCAAGCCCTGTCAA+GGG + chr4_4:78228448-78228467 None:intergenic 45.0%
ATAACTCTCAAGCCCTGTCA+AGG + chr4_4:78228449-78228468 None:intergenic 45.0%
!!! TTGGTTTTTGATGGCGGAGT+TGG - chr4_4:78228573-78228592 Msa0705500:intron 45.0%
GTATGAGGTCGTATCAAAGG+CGG + chr4_4:78228676-78228695 None:intergenic 45.0%
! TGACTTTTACCTCCAGCACT+CGG + chr4_4:78228706-78228725 None:intergenic 45.0%
CTATTCTCATCAGGAGACAG+CGG + chr4_4:78228844-78228863 None:intergenic 45.0%
GCATCTCTAACCTTAGGACT+TGG + chr4_4:78228886-78228905 None:intergenic 45.0%
! GACGGTGATTCTGAAAAGGA+TGG - chr4_4:78228937-78228956 Msa0705500:CDS 45.0%
GATAGTAGGGACAGTACTAG+AGG - chr4_4:78229102-78229121 Msa0705500:CDS 45.0%
GATGTGTCCTCAAGTTCAGA+AGG - chr4_4:78229195-78229214 Msa0705500:CDS 45.0%
!! GGACTACTTTTGTCGTCTTC+AGG + chr4_4:78229573-78229592 None:intergenic 45.0%
TTGAAGATTCAGAGCTGCTG+GGG - chr4_4:78229688-78229707 Msa0705500:intron 45.0%
CTATATTTGTAGGTGGAGGG+AGG + chr4_4:78229967-78229986 None:intergenic 45.0%
GGGATTAAAATGCGGGTACA+AGG - chr4_4:78230095-78230114 Msa0705500:intron 45.0%
AAAACATGGACGAATGCAGG+TGG + chr4_4:78230576-78230595 None:intergenic 45.0%
TGTCTGTGAGTGTGTGTTTG+AGG - chr4_4:78230614-78230633 Msa0705500:intron 45.0%
! TCTAGAATAACGGAGCAGCA+AGG + chr4_4:78231303-78231322 None:intergenic 45.0%
CACGCTTGATTACATGGCAT+TGG - chr4_4:78231546-78231565 Msa0705500:CDS 45.0%
CCACATGAGGCACAAAAAAC+GGG + chr4_4:78231724-78231743 None:intergenic 45.0%
CCCACATGAGGCACAAAAAA+CGG + chr4_4:78231725-78231744 None:intergenic 45.0%
!!! CCGTTTTTTGTGCCTCATGT+GGG - chr4_4:78231722-78231741 Msa0705500:CDS 45.0%
!!! CGTTTTTTGTGCCTCATGTG+GGG - chr4_4:78231723-78231742 Msa0705500:CDS 45.0%
!! GATGGATTGATCGGTAATGG+GGG + chr4_4:78231819-78231838 None:intergenic 45.0%
!! CGGAACTGAGATGGATTGAT+CGG + chr4_4:78231828-78231847 None:intergenic 45.0%
TCCATCTCAGTTCCGTAAAG+GGG - chr4_4:78231833-78231852 Msa0705500:CDS 45.0%
AGTCATGGTAAGCCCCTTTA+CGG + chr4_4:78231848-78231867 None:intergenic 45.0%
GAACAAACTCCAACGAGTCA+TGG + chr4_4:78231863-78231882 None:intergenic 45.0%
ACAGAGGTTCAGAATACTGG+AGG - chr4_4:78232102-78232121 Msa0705500:CDS 45.0%
TCTCTTGAATTCTCGGGAGA+AGG - chr4_4:78232792-78232811 Msa0705500:CDS 45.0%
TCTCAGAAGCTTTCTCAAGG+TGG - chr4_4:78232986-78233005 Msa0705500:five_prime_UTR 45.0%
GGTGGAATTCCTTTGGCAAA+TGG - chr4_4:78233004-78233023 Msa0705500:five_prime_UTR 45.0%
! AAAGCGTCTCCATTTGCCAA+AGG + chr4_4:78233016-78233035 None:intergenic 45.0%
!! CATAATGGATAAGCCCAAGG+GGG + chr4_4:78233052-78233071 None:intergenic 45.0%
!! CCATAATGGATAAGCCCAAG+GGG + chr4_4:78233053-78233072 None:intergenic 45.0%
!! GTCCATAATGGATAAGCCCA+AGG + chr4_4:78233055-78233074 None:intergenic 45.0%
TCCATTATGGACAGCACAAG+AGG - chr4_4:78233063-78233082 Msa0705500:five_prime_UTR 45.0%
ACCTCTTGTGCTGTCCATAA+TGG + chr4_4:78233067-78233086 None:intergenic 45.0%
CAGATACATGAGTCATTGCC+TGG + chr4_4:78233141-78233160 None:intergenic 45.0%
! TGTTAGCCTGAATCTGTCAG+TGG - chr4_4:78233171-78233190 Msa0705500:five_prime_UTR 45.0%
GTGTTTCCACTGACAGATTC+AGG + chr4_4:78233180-78233199 None:intergenic 45.0%
! GAGGGTGTATATGAAGCATC+AGG - chr4_4:78233208-78233227 Msa0705500:five_prime_UTR 45.0%
AGCAGAACATGACAGTGATC+TGG - chr4_4:78233231-78233250 Msa0705500:five_prime_UTR 45.0%
!! GTAGTATTGACAGCTGATCC+TGG - chr4_4:78233265-78233284 Msa0705500:five_prime_UTR 45.0%
!! AGTATTGACAGCTGATCCTG+GGG - chr4_4:78233267-78233286 Msa0705500:five_prime_UTR 45.0%
ATATCTTCCAACCTAACCCC+AGG + chr4_4:78233286-78233305 None:intergenic 45.0%
! TTGAGGATAAAGCACCACCT+CGG - chr4_4:78233305-78233324 Msa0705500:five_prime_UTR 45.0%
! TAAAGCACCACCTCGGAAAA+AGG - chr4_4:78233312-78233331 Msa0705500:five_prime_UTR 45.0%
!!! TTTAATTTATTTAAAACATA+AGG + chr4_4:78231680-78231699 None:intergenic 5.0%
TGAGGAAGACGACAGAGATG+AGG + chr4_4:78227706-78227725 None:intergenic 50.0%
!!! CGTTTTGAGGGAGGTGGTAA+CGG + chr4_4:78227768-78227787 None:intergenic 50.0%
! TTGAAAAGCGTAGAAGCGCG+TGG + chr4_4:78227852-78227871 None:intergenic 50.0%
CCTCGCAGAGCAACAATTGA+CGG + chr4_4:78227992-78228011 None:intergenic 50.0%
CGTCAATTGTTGCTCTGCGA+GGG - chr4_4:78227990-78228009 Msa0705500:CDS 50.0%
! GAGGATTAGGGTTTTCGGTG+AGG - chr4_4:78228103-78228122 Msa0705500:intron 50.0%
GTACAAGCATGATCATGCCG+GGG - chr4_4:78228387-78228406 Msa0705500:intron 50.0%
ACACAAGCCTAGTCCGTCAT+TGG - chr4_4:78228495-78228514 Msa0705500:intron 50.0%
!!! GTTTTTGATGGCGGAGTTGG+AGG - chr4_4:78228576-78228595 Msa0705500:intron 50.0%
! CAGCTACTTTGATGGGTGAG+TGG - chr4_4:78228650-78228669 Msa0705500:intron 50.0%
CGCTGTCTCCTGATGAGAAT+AGG - chr4_4:78228842-78228861 Msa0705500:intron 50.0%
! GGCAAAGGTGATGATGAGCT+CGG - chr4_4:78228985-78229004 Msa0705500:intron 50.0%
GGACAGTACTAGAGGTGATG+AGG - chr4_4:78229110-78229129 Msa0705500:CDS 50.0%
AGAAGATACTGCCAATGGCG+AGG - chr4_4:78229497-78229516 Msa0705500:intron 50.0%
AGGACTGGACATTGAGTGTG+TGG + chr4_4:78230649-78230668 None:intergenic 50.0%
CACACTCAATGTCCAGTCCT+TGG - chr4_4:78230649-78230668 Msa0705500:intron 50.0%
TCCTAGACATGCAGTGAAGG+TGG - chr4_4:78230854-78230873 Msa0705500:intron 50.0%
ACCACCTTCACTGCATGTCT+AGG + chr4_4:78230858-78230877 None:intergenic 50.0%
! CTTTTGTGTTGGGGTCGATG+TGG - chr4_4:78231372-78231391 Msa0705500:CDS 50.0%
!!! CCCGTTTTTTGTGCCTCATG+TGG - chr4_4:78231721-78231740 Msa0705500:CDS 50.0%
GCACTCTTGCGATCTTCAGT+TGG + chr4_4:78231927-78231946 None:intergenic 50.0%
!! TCGCAAGAGTGCTCTTCAAG+AGG - chr4_4:78231935-78231954 Msa0705500:CDS 50.0%
AGTCTGTTTCCCACTGGGAA+AGG - chr4_4:78232729-78232748 Msa0705500:CDS 50.0%
GTCTGTTTCCCACTGGGAAA+GGG - chr4_4:78232730-78232749 Msa0705500:CDS 50.0%
GATACATGCCCTTTCCCAGT+GGG + chr4_4:78232741-78232760 None:intergenic 50.0%
TCTTGCAAAAACCACCCCCT+TGG - chr4_4:78233035-78233054 Msa0705500:five_prime_UTR 50.0%
CTTGCAAAAACCACCCCCTT+GGG - chr4_4:78233036-78233055 Msa0705500:five_prime_UTR 50.0%
CCCCTTGGGCTTATCCATTA+TGG - chr4_4:78233050-78233069 Msa0705500:five_prime_UTR 50.0%
AATTGCCTGAGCAGTCGATC+TGG + chr4_4:78233116-78233135 None:intergenic 50.0%
! CGATGTTCCTTTTTCCGAGG+TGG + chr4_4:78233322-78233341 None:intergenic 50.0%
!! TTTGAGGGAGGTGGTAACGG+TGG + chr4_4:78227765-78227784 None:intergenic 55.0%
!!! AAACGACGGCGTTTTGAGGG+AGG + chr4_4:78227777-78227796 None:intergenic 55.0%
CCGTCAATTGTTGCTCTGCG+AGG - chr4_4:78227989-78228008 Msa0705500:CDS 55.0%
CGGTTATTAGGGTTCGCTCG+CGG - chr4_4:78228238-78228257 Msa0705500:CDS 55.0%
CGGTTACGCAGATGAACCCA+GGG - chr4_4:78228258-78228277 Msa0705500:CDS 55.0%
GCAAAGATAATCCCGCACCC+CGG + chr4_4:78228407-78228426 None:intergenic 55.0%
GCACTCGGAGGTTCAGTATG+AGG + chr4_4:78228691-78228710 None:intergenic 55.0%
CATACTGAACCTCCGAGTGC+TGG - chr4_4:78228691-78228710 Msa0705500:intron 55.0%
! CTTTTACCTCCAGCACTCGG+AGG + chr4_4:78228703-78228722 None:intergenic 55.0%
TGACAAAGACTTCGGCGGTG+AGG + chr4_4:78228779-78228798 None:intergenic 55.0%
AGGCTCTTCTTCCTCGCCAT+TGG + chr4_4:78229511-78229530 None:intergenic 55.0%
TGTCGTCTTCAGGGTGCACA+CGG + chr4_4:78229563-78229582 None:intergenic 55.0%
GGGGTCAAAGAGGCAGAAAG+AGG - chr4_4:78229707-78229726 Msa0705500:intron 55.0%
GGTGCATGTAGCCAATCCAG+TGG + chr4_4:78229936-78229955 None:intergenic 55.0%
TTTGTAGGTGGAGGGAGGGA+GGG + chr4_4:78229962-78229981 None:intergenic 55.0%
ATTTGTAGGTGGAGGGAGGG+AGG + chr4_4:78229963-78229982 None:intergenic 55.0%
TCAATGTCCAGTCCTTGGCC+TGG - chr4_4:78230654-78230673 Msa0705500:intron 55.0%
GCCCCTTTACGGAACTGAGA+TGG + chr4_4:78231837-78231856 None:intergenic 55.0%
AGGGGCTTACCATGACTCGT+TGG - chr4_4:78231851-78231870 Msa0705500:CDS 55.0%
TCCAGGAGTCTGTTTCCCAC+TGG - chr4_4:78232723-78232742 Msa0705500:CDS 55.0%
CCAGGAGTCTGTTTCCCACT+GGG - chr4_4:78232724-78232743 Msa0705500:CDS 55.0%
CGATACATGCCCTTTCCCAG+TGG + chr4_4:78232742-78232761 None:intergenic 55.0%
AATGGATAAGCCCAAGGGGG+TGG + chr4_4:78233049-78233068 None:intergenic 55.0%
GATGTCCAGATCGACTGCTC+AGG - chr4_4:78233108-78233127 Msa0705500:five_prime_UTR 55.0%
GACTGCTCAGGCAATTGACC+AGG - chr4_4:78233120-78233139 Msa0705500:five_prime_UTR 55.0%
TGACAGCTGATCCTGGGGTT+AGG - chr4_4:78233272-78233291 Msa0705500:five_prime_UTR 55.0%
AGCTGATCCTGGGGTTAGGT+TGG - chr4_4:78233276-78233295 Msa0705500:five_prime_UTR 55.0%
! CGGCGATGTTCCTTTTTCCG+AGG + chr4_4:78233325-78233344 None:intergenic 55.0%
GCGGTTACGCAGATGAACCC+AGG - chr4_4:78228257-78228276 Msa0705500:CDS 60.0%
AGCATGATCATGCCGGGGTG+CGG - chr4_4:78228392-78228411 Msa0705500:intron 60.0%
!! ACTGAACCTCCGAGTGCTGG+AGG - chr4_4:78228694-78228713 Msa0705500:intron 60.0%
CAGAGCTGCTGGGGTCAAAG+AGG - chr4_4:78229697-78229716 Msa0705500:intron 60.0%
ATGTCCAGTCCTTGGCCTGG+AGG - chr4_4:78230657-78230676 Msa0705500:intron 60.0%
TGTCCAGTCCTTGGCCTGGA+GGG - chr4_4:78230658-78230677 Msa0705500:intron 60.0%
GACTCTCAACACACCCCTCC+AGG + chr4_4:78230675-78230694 None:intergenic 60.0%
CCCAGTGGGAAACAGACTCC+TGG + chr4_4:78232727-78232746 None:intergenic 60.0%
!! GAGGGAGGTGGTAACGGTGG+TGG + chr4_4:78227762-78227781 None:intergenic 65.0%
!!! CGACGGCGTTTTGAGGGAGG+TGG + chr4_4:78227774-78227793 None:intergenic 65.0%
GCATGATCATGCCGGGGTGC+GGG - chr4_4:78228393-78228412 Msa0705500:intron 65.0%
AGGTGGAGGGAGGGAGGGAT+GGG + chr4_4:78229957-78229976 None:intergenic 65.0%
TAGGTGGAGGGAGGGAGGGA+TGG + chr4_4:78229958-78229977 None:intergenic 65.0%
GTCCAGTCCTTGGCCTGGAG+GGG - chr4_4:78230659-78230678 Msa0705500:intron 65.0%
CAACACACCCCTCCAGGCCA+AGG + chr4_4:78230669-78230688 None:intergenic 65.0%
! CTTTGCGGCATTGGGGACCC+AGG + chr4_4:78231777-78231796 None:intergenic 65.0%
CACCCCTCCAGGCCAAGGAC+TGG + chr4_4:78230664-78230683 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 78227698 78233360 78227698 ID=Msa0705500;Name=Msa0705500
chr4_4 mRNA 78227698 78233360 78227698 ID=Msa0705500-mRNA-1;Parent=Msa0705500;Name=Msa0705500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=534|1|0.8|1|1|1|5|0|755
chr4_4 exon 78227698 78228094 78227698 ID=Msa0705500-mRNA-1:exon:24915;Parent=Msa0705500-mRNA-1
chr4_4 exon 78228198 78228330 78228198 ID=Msa0705500-mRNA-1:exon:24914;Parent=Msa0705500-mRNA-1
chr4_4 exon 78228935 78228983 78228935 ID=Msa0705500-mRNA-1:exon:24913;Parent=Msa0705500-mRNA-1
chr4_4 exon 78229102 78229290 78229102 ID=Msa0705500-mRNA-1:exon:24912;Parent=Msa0705500-mRNA-1
chr4_4 exon 78231330 78233360 78231330 ID=Msa0705500-mRNA-1:exon:24911;Parent=Msa0705500-mRNA-1
chr4_4 five_prime_UTR 78232827 78233360 78232827 ID=Msa0705500-mRNA-1:five_prime_utr;Parent=Msa0705500-mRNA-1
chr4_4 CDS 78231330 78232826 78231330 ID=Msa0705500-mRNA-1:cds;Parent=Msa0705500-mRNA-1
chr4_4 CDS 78229102 78229290 78229102 ID=Msa0705500-mRNA-1:cds;Parent=Msa0705500-mRNA-1
chr4_4 CDS 78228935 78228983 78228935 ID=Msa0705500-mRNA-1:cds;Parent=Msa0705500-mRNA-1
chr4_4 CDS 78228198 78228330 78228198 ID=Msa0705500-mRNA-1:cds;Parent=Msa0705500-mRNA-1
chr4_4 CDS 78227698 78228094 78227698 ID=Msa0705500-mRNA-1:cds;Parent=Msa0705500-mRNA-1
Gene Sequence

>Msa0705500

ATGGTGCGGTTATTAGGGTTCGCTCGCGGTTACGCAGATGAACCCAGGGAAATTGAGTCAAAGTCAAACCTGACTAGTGATTCTAGTGAAAATGGTTGGCTTATTAGGTTCTTTGATTCGTCGTTTTTTTGTGAATGGATTGCTGTTAGTTACTTGTACAAGCATGATCATGCCGGGGTGCGGGATTATCTTTGCAATAGAATGTATACTCTTCCCTTGACAGGGCTTGAGAGTTATTTGTTTCAGATTTGTTATATGATGATACACAAGCCTAGTCCGTCATTGGATAAGTTTGTGATAGATATGTGCTCCAAGTCGCTTAAGATTGCATTGAAAGTGCATTGGTTTTTGATGGCGGAGTTGGAGGATTCTGATGATAATGATGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCAGCTACTTTGATGGGTGAGTGGCCGCCTTTGATACGACCTCATACTGAACCTCCGAGTGCTGGAGGTAAAAGTCAAGTTTTGAATAGGTTACTTTCGAGTAAAAATCGTTTATTATCTTTAACAACCTCACCGCCGAAGTCTTTGTCATTTTCATCTTCACCGGGAAATAATATGCAAGAGGATGGAAATCCGCTGTCTCCTGATGAGAATAGGATATTTAAAAAGTTTATGCCAAGTCCTAAGGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGCGGATAAAGATGACGGTGATTCTGAAAAGGATGGGTTTTTCAAGAGACTTTTAAGAGATGGCAAAGGTGATGATGAGCTCGGCCAAAAAATTCGTGATGCATTTCATTTTCGGAAGTCGTCCGAGAAAGATGCCTTAGACTCTGAGAAAGAGAATTTCTTTAAAAGGTTCTTAAGAGATAGTAGGGACAGTACTAGAGGTGATGAGGAAGAATCTGAAAAGGATGGTTTCTTTCAAAGGATCTTAAGAGAAAGTAGAAGCGAAGATGAGGATGTGTCCTCAAGTTCAGAAGGATTTTTTAAGAAGTTATTTCGGGATAGTAAGAATGATTCTGAGGACAAAACGGATTCAAAAACAGTGGAAGATGAAGAGAAAGATGGACTTTTCCGAAAGTTTTTCCGGGAGAAATTCGAAGATAAGAAAGATGCGCGTGACAGAAACGACAATAGAAATGTTCCTAATTCTGAAGAGAAATGTCCAAAACCTGATGAAGAGGATGAAAAAGATGGGTTTTTCCGGAAATTCTTCAGGGATAAATTTGAGGACAAGAAAGACACAAAAGATAAAATTGAAGAAGATACTGCCAATGGCGAGGAAGAAGAGCCTTCTGAACTTTCCTTGTTCAAAAGGCTATTCCGTGTGCACCCTGAAGACGACAAAAGTAGTCCAGTCAATGAAAATAGCAATAACGGTGGTTTATTTCAAAGTAGTCCAGGTACAGAGAATTTTTTCCGTAAATTGTTCAAAGACCGTGACCGTTCAATTGAAGATTCAGAGCTGCTGGGGTCAAAGAGGCAGAAAGAGAAGCATCCTGGGTCCCCAATGCCGCAAAGTGAAAAATCGAGCACAAAGCCCCCATTACCGATCAATCCATCTCAGTTCCGTAAAGGGGCTTACCATGACTCGTTGGAGTTTGTTCAGTCACTATGTGACACATCTTATGGGTTAGTGGATGTATTTCCAACTGAAGATCGCAAGAGTGCTCTTCAAGAGTCACTTAGAGAGATCAATGTACATGTAACAGAGGTTCAGAATACTGGAGGAGTCTGTTTCCCACTGGGAAAGGGCATGTATCGCGTGCTTCATATGCCAGTAGATGAAGCTGTTCTCTTGAATTCTCGGGAGAAGGCACCTTACATGATATGCATCGAAGTTTTGAGATGTGAAATGCCAAGTAATTTCAAGGAGACATCCAGTTCTCAGAAGCTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGACGCTTTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTATGGACAGCACAAGAGGTGTACCGTAATAGCAATGATAGGATGTCCAGATCGACTGCTCAGGCAATTGACCAGGCAATGACTCATGTATCTGAGCCAAAATTTGTTAGCCTGAATCTGTCAGTGGAAACACGGTATAATGAGGGTGTATATGAAGCATCAGGAGCAGAACATGACAGTGATCTGGAATGGGTACGAGTAGTATTGACAGCTGATCCTGGGGTTAGGTTGGAAGATATTGAGGATAAAGCACCACCTCGGAAAAAGGAACATCGCCGTGTTCCAAGTACAGTG
Protein sequence

>Msa0705500

MVRLLGFARGYADEPREIESKSNLTSDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLTGLESYLFQICYMMIHKPSPSLDKFVIDMCSKSLKIALKVHWFLMAELEDSDDNDGISRIQEKCQIAATLMGEWPPLIRPHTEPPSAGGKSQVLNRLLSSKNRLLSLTTSPPKSLSFSSSPGNNMQEDGNPLSPDENRIFKKFMPSPKVRDALLFRKSADKDDGDSEKDGFFKRLLRDGKGDDELGQKIRDAFHFRKSSEKDALDSEKENFFKRFLRDSRDSTRGDEEESEKDGFFQRILRESRSEDEDVSSSSEGFFKKLFRDSKNDSEDKTDSKTVEDEEKDGLFRKFFREKFEDKKDARDRNDNRNVPNSEEKCPKPDEEDEKDGFFRKFFRDKFEDKKDTKDKIEEDTANGEEEEPSELSLFKRLFRVHPEDDKSSPVNENSNNGGLFQSSPGTENFFRKLFKDRDRSIEDSELLGSKRQKEKHPGSPMPQSEKSSTKPPLPINPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPTEDRKSALQESLREINVHVTEVQNTGGVCFPLGKGMYRVLHMPVDEAVLLNSREKAPYMICIEVLRCEMPSNFKETSSSQKLSQGGIPLANGDAFLQKPPPWAYPLWTAQEVYRNSNDRMSRSTAQAIDQAMTHVSEPKFVSLNLSVETRYNEGVYEASGAEHDSDLEWVRVVLTADPGVRLEDIEDKAPPRKKEHRRVPSTV