Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0536270 | XP_003604961.1 | 92.840 | 419 | 29 | 1 | 1 | 418 | 1 | 419 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0536270 | sp|Q8S8P3|GT14C_ARATH | 67.143 | 350 | 94 | 4 | 69 | 418 | 56 | 384 | 4.17e-166 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0536270 | G7JUI4 | 92.840 | 419 | 29 | 1 | 1 | 418 | 1 | 419 | 0.0 | 732 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0536270 | Msa0945630 | 0.802094 | 6.604482e-49 | -8.615850e-47 |
| Msa0536270 | Msa1101090 | 0.807036 | 6.150208e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0536270 | MtrunA17_Chr4g0010141 | 92.840 | 419 | 29 | 1 | 1 | 418 | 1 | 419 | 0.0 | 732 |
| Msa0536270 | MtrunA17_Chr6g0452631 | 51.282 | 429 | 194 | 3 | 3 | 417 | 5 | 432 | 5.07e-163 | 465 |
| Msa0536270 | MtrunA17_Chr4g0022501 | 59.143 | 350 | 141 | 2 | 68 | 417 | 85 | 432 | 4.49e-158 | 452 |
| Msa0536270 | MtrunA17_Chr2g0317441 | 53.125 | 352 | 160 | 1 | 67 | 418 | 78 | 424 | 2.58e-135 | 394 |
| Msa0536270 | MtrunA17_Chr6g0460801 | 48.259 | 402 | 201 | 5 | 23 | 418 | 4 | 404 | 4.83e-135 | 393 |
| Msa0536270 | MtrunA17_Chr1g0208381 | 52.000 | 350 | 167 | 1 | 70 | 418 | 48 | 397 | 6.59e-135 | 392 |
| Msa0536270 | MtrunA17_Chr7g0254121 | 48.111 | 397 | 193 | 6 | 29 | 418 | 9 | 399 | 4.24e-128 | 375 |
| Msa0536270 | MtrunA17_Chr4g0063621 | 48.711 | 349 | 147 | 1 | 69 | 417 | 72 | 388 | 1.69e-122 | 360 |
| Msa0536270 | MtrunA17_Chr1g0169461 | 46.089 | 358 | 190 | 2 | 60 | 417 | 84 | 438 | 1.73e-114 | 342 |
| Msa0536270 | MtrunA17_Chr4g0002191 | 45.429 | 350 | 189 | 2 | 70 | 418 | 59 | 407 | 5.67e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0536270 | AT2G37585.1 | 67.143 | 350 | 94 | 4 | 69 | 418 | 56 | 384 | 4.24e-167 | 474 |
| Msa0536270 | AT5G15050.1 | 56.897 | 348 | 150 | 0 | 71 | 418 | 87 | 434 | 1.41e-159 | 457 |
| Msa0536270 | AT5G39990.1 | 55.754 | 391 | 171 | 1 | 28 | 418 | 59 | 447 | 2.27e-159 | 457 |
| Msa0536270 | AT1G03520.2 | 57.423 | 357 | 150 | 2 | 61 | 417 | 3 | 357 | 5.66e-154 | 440 |
| Msa0536270 | AT1G03520.1 | 51.515 | 429 | 187 | 6 | 8 | 417 | 20 | 446 | 1.80e-152 | 439 |
| Msa0536270 | AT4G03340.1 | 55.742 | 357 | 156 | 2 | 61 | 417 | 93 | 447 | 1.53e-148 | 429 |
| Msa0536270 | AT4G27480.2 | 52.825 | 354 | 162 | 1 | 65 | 418 | 73 | 421 | 2.33e-146 | 423 |
| Msa0536270 | AT4G27480.3 | 52.825 | 354 | 162 | 1 | 65 | 418 | 73 | 421 | 2.33e-146 | 423 |
| Msa0536270 | AT4G27480.1 | 52.825 | 354 | 162 | 1 | 65 | 418 | 73 | 421 | 2.33e-146 | 423 |
| Msa0536270 | AT3G15350.2 | 55.524 | 353 | 150 | 2 | 68 | 418 | 77 | 424 | 1.90e-145 | 421 |
| Msa0536270 | AT3G15350.1 | 55.524 | 353 | 150 | 2 | 68 | 418 | 77 | 424 | 1.90e-145 | 421 |
| Msa0536270 | AT4G03340.2 | 51.541 | 357 | 148 | 3 | 61 | 417 | 93 | 424 | 8.16e-132 | 386 |
| Msa0536270 | AT1G53100.1 | 52.707 | 351 | 158 | 3 | 68 | 417 | 79 | 422 | 8.61e-132 | 386 |
| Msa0536270 | AT1G53100.2 | 54.006 | 337 | 147 | 3 | 68 | 403 | 79 | 408 | 1.58e-130 | 382 |
| Msa0536270 | AT3G03690.1 | 55.692 | 325 | 134 | 3 | 42 | 363 | 30 | 347 | 3.23e-130 | 380 |
| Msa0536270 | AT1G71070.1 | 49.570 | 349 | 176 | 0 | 70 | 418 | 47 | 395 | 3.70e-130 | 380 |
| Msa0536270 | AT3G24040.1 | 43.514 | 370 | 199 | 1 | 48 | 417 | 55 | 414 | 4.10e-109 | 328 |
| Msa0536270 | AT3G03690.2 | 54.971 | 171 | 70 | 2 | 46 | 216 | 34 | 197 | 5.71e-59 | 191 |
Find 98 sgRNAs with CRISPR-Local
Find 481 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGCTTTGTTTCTTAAA+AGG | 0.181047 | 4_1:+13143572 | Msa0536270:CDS |
| AATGATCCTTGTGATGTTTA+TGG | 0.197178 | 4_1:+13148889 | Msa0536270:CDS |
| GTTAACAAGTATGCAAATTT+TGG | 0.201441 | 4_1:-13143316 | None:intergenic |
| GGTGGTTGTTGTGGTGGTTT+TGG | 0.206500 | 4_1:-13143138 | None:intergenic |
| TTTGGTGGTGGTGGGAACTA+TGG | 0.221893 | 4_1:-13143120 | None:intergenic |
| GAAATTGATGTTGATACTAT+TGG | 0.234170 | 4_1:+13148957 | Msa0536270:CDS |
| AAAGATAAAGGCTGTTGTTT+TGG | 0.246904 | 4_1:-13148703 | None:intergenic |
| CATTGAGCATACAAGCAATA+TGG | 0.260515 | 4_1:+13147637 | Msa0536270:CDS |
| AAAGACTATTTACACTGTTT+TGG | 0.267010 | 4_1:-13148997 | None:intergenic |
| AAATTTGCATACTTGTTAAC+AGG | 0.278053 | 4_1:+13143319 | Msa0536270:CDS |
| GGTGATTTGGTTACTTATAA+AGG | 0.283789 | 4_1:+13143520 | Msa0536270:CDS |
| CAAGGAACTGTTGGGAAGAT+TGG | 0.299661 | 4_1:+13148816 | Msa0536270:CDS |
| ACCATAACCCACCAAGAAAA+TGG | 0.307666 | 4_1:+13143158 | Msa0536270:CDS |
| TTTCTCGAGTTCTGTGTATA+TGG | 0.316897 | 4_1:+13148529 | Msa0536270:CDS |
| TGTTCTAGTTTCAAAGATAA+AGG | 0.320876 | 4_1:-13148715 | None:intergenic |
| TTGTCGGTGTTACAAGGTTT+TGG | 0.329052 | 4_1:-13143023 | None:intergenic |
| GTGTGTTGGTAGTCATCTTA+AGG | 0.348157 | 4_1:+13148864 | Msa0536270:CDS |
| TGTTGCTTTGTTTCTTAAAA+GGG | 0.351464 | 4_1:+13143573 | Msa0536270:CDS |
| TGAAGCAGGTAATAGTTTCT+TGG | 0.359043 | 4_1:-13143394 | None:intergenic |
| ATTAACTCATTAAAATTAAG+AGG | 0.360936 | 4_1:-13149104 | None:intergenic |
| TCTTAAAAGGGTTGGTGATT+GGG | 0.363156 | 4_1:+13143585 | Msa0536270:CDS |
| TTCTTAAAAGGGTTGGTGAT+TGG | 0.364518 | 4_1:+13143584 | Msa0536270:CDS |
| GAGAAGAAGTGAGATTGTTA+AGG | 0.378395 | 4_1:-13143194 | None:intergenic |
| AGAAGTGAGATTGTTAAGGT+TGG | 0.381718 | 4_1:-13143190 | None:intergenic |
| TTTGGGAATGTTATGGTTGT+TGG | 0.382183 | 4_1:+13143493 | Msa0536270:CDS |
| ACACTAGGATTAACAACATC+TGG | 0.388852 | 4_1:-13148916 | None:intergenic |
| ATCAAATCAGTTGTGAAACT+TGG | 0.391593 | 4_1:-13143280 | None:intergenic |
| GGTTATGGTGGTTGTTGTGG+TGG | 0.395443 | 4_1:-13143144 | None:intergenic |
| GAACTATGGTTTCGTTTCAT+TGG | 0.397078 | 4_1:-13143106 | None:intergenic |
| GGTTGTTGGTAAAGGTGATT+TGG | 0.399415 | 4_1:+13143507 | Msa0536270:CDS |
| TCGAGTTCTGTGTATATGGT+TGG | 0.399859 | 4_1:+13148533 | Msa0536270:CDS |
| GTGGGTTATGGTGGTTGTTG+TGG | 0.402775 | 4_1:-13143147 | None:intergenic |
| ACCACGACTTGCGTTACTTA+AGG | 0.409028 | 4_1:+13148668 | Msa0536270:CDS |
| AAAGGGTTGGTGATTGGGAT+TGG | 0.416032 | 4_1:+13143590 | Msa0536270:CDS |
| TGTGATTGCAGAGGACAGTA+TGG | 0.418993 | 4_1:-13148621 | None:intergenic |
| GAAGTGAGATTGTTAAGGTT+GGG | 0.421453 | 4_1:-13143189 | None:intergenic |
| GTGAAGTTTCACAGCTCAAA+AGG | 0.425112 | 4_1:+13143350 | Msa0536270:CDS |
| CGAGTTCTGTGTATATGGTT+GGG | 0.436277 | 4_1:+13148534 | Msa0536270:CDS |
| ATTGAGCATACAAGCAATAT+GGG | 0.436525 | 4_1:+13147638 | Msa0536270:CDS |
| AAGGAACTGTTGGGAAGATT+GGG | 0.437030 | 4_1:+13148817 | Msa0536270:CDS |
| GTTTGTTCTTGAGATTGGTT+TGG | 0.440816 | 4_1:-13143001 | None:intergenic |
| TGAGTTTCCTATGTTGTTGT+CGG | 0.448389 | 4_1:-13143039 | None:intergenic |
| TGTGTTGGTAGTCATCTTAA+GGG | 0.452829 | 4_1:+13148865 | Msa0536270:CDS |
| ACTCCTGGTGGTTGGTGTGT+TGG | 0.461874 | 4_1:+13148850 | Msa0536270:CDS |
| AATGTTATGGTTGTTGGTAA+AGG | 0.462855 | 4_1:+13143499 | Msa0536270:CDS |
| ATCCAGGCTTGTATCATTCA+AGG | 0.469831 | 4_1:+13147807 | Msa0536270:CDS |
| TAAAATTGACAAGGAACTGT+TGG | 0.472233 | 4_1:+13148807 | Msa0536270:CDS |
| TACTTGTTAACAGGGACAAA+AGG | 0.473850 | 4_1:+13143328 | Msa0536270:CDS |
| ATGTTGTTGTCGGTGTTACA+AGG | 0.479058 | 4_1:-13143029 | None:intergenic |
| AAGCCTGGATCTATAATGAT+AGG | 0.482330 | 4_1:-13147794 | None:intergenic |
| AGCATACAAGCAATATGGGT+TGG | 0.487548 | 4_1:+13147642 | Msa0536270:CDS |
| TTGGGTAGTCGCTTTACTCC+TGG | 0.490301 | 4_1:+13148835 | Msa0536270:CDS |
| GTGAATAACTTGAACGAAGA+TGG | 0.490766 | 4_1:-13147869 | None:intergenic |
| AATAGCCTTCGTTCGAAGAA+AGG | 0.497318 | 4_1:-13148597 | None:intergenic |
| GAAGAAAGAGATGAAGAAGA+TGG | 0.503085 | 4_1:-13143250 | None:intergenic |
| TTGCATATTGAAGGTGAAGA+GGG | 0.503197 | 4_1:-13142952 | None:intergenic |
| TATCCTCTCTTCTCACAAGA+TGG | 0.505162 | 4_1:+13143637 | Msa0536270:CDS |
| GCTTTGTTTCTTAAAAGGGT+TGG | 0.505759 | 4_1:+13143577 | Msa0536270:CDS |
| AAAATTGACAAGGAACTGTT+GGG | 0.505867 | 4_1:+13148808 | Msa0536270:CDS |
| GTGAAATCTGAGAAGGTGTT+TGG | 0.506341 | 4_1:+13143466 | Msa0536270:CDS |
| AGACCTATCATTATAGATCC+AGG | 0.509965 | 4_1:+13147791 | Msa0536270:CDS |
| GTCGCTTTACTCCTGGTGGT+TGG | 0.510661 | 4_1:+13148842 | Msa0536270:CDS |
| TTGTCGAATCTACGAGCAAA+AGG | 0.513664 | 4_1:-13148766 | None:intergenic |
| TCTTCGTTCAAGTTATTCAC+AGG | 0.516767 | 4_1:+13147872 | Msa0536270:CDS |
| ACCCTTGAATGATACAAGCC+TGG | 0.526078 | 4_1:-13147809 | None:intergenic |
| TGGATCTATAATGATAGGTC+TGG | 0.534046 | 4_1:-13147789 | None:intergenic |
| ACGACTTGCGTTACTTAAGG+TGG | 0.535340 | 4_1:+13148671 | Msa0536270:CDS |
| TAGATTCGACAAGGACGATC+CGG | 0.535430 | 4_1:+13148777 | Msa0536270:CDS |
| ATGTTGTTAATCCTAGTGTA+AGG | 0.539605 | 4_1:+13148920 | Msa0536270:CDS |
| TAGTACATGAGGAGAGTTCG+AGG | 0.548821 | 4_1:-13148565 | None:intergenic |
| TGAAGTTTCACAGCTCAAAA+GGG | 0.550707 | 4_1:+13143351 | Msa0536270:CDS |
| ATAACTTGAACGAAGATGGT+AGG | 0.555969 | 4_1:-13147865 | None:intergenic |
| CTTCAAGATCAAGATGAAGC+AGG | 0.560119 | 4_1:-13143408 | None:intergenic |
| TAACTTGAACGAAGATGGTA+GGG | 0.563605 | 4_1:-13147864 | None:intergenic |
| TGTAACACCGACAACAACAT+AGG | 0.565519 | 4_1:+13143032 | Msa0536270:five_prime_UTR |
| TATACACAGAACTCGAGAAA+CGG | 0.567534 | 4_1:-13148526 | None:intergenic |
| AACTTCCTTTCTTCGAACGA+AGG | 0.571025 | 4_1:+13148592 | Msa0536270:CDS |
| TAGTGAAGAGAGGATTGAGT+TGG | 0.572370 | 4_1:+13143435 | Msa0536270:CDS |
| TCCAGGCTTGTATCATTCAA+GGG | 0.572991 | 4_1:+13147808 | Msa0536270:CDS |
| TTTGCATATTGAAGGTGAAG+AGG | 0.578499 | 4_1:-13142953 | None:intergenic |
| ACCTTAAGTAACGCAAGTCG+TGG | 0.584221 | 4_1:-13148669 | None:intergenic |
| CTACCAACACACCAACCACC+AGG | 0.588118 | 4_1:-13148853 | None:intergenic |
| AGTGTTGAAGCAATCATAGT+AGG | 0.589191 | 4_1:-13143544 | None:intergenic |
| TTGAAGCTTCTAGTGAAGAG+AGG | 0.595844 | 4_1:+13143425 | Msa0536270:CDS |
| GGTAGTCGCTTTACTCCTGG+TGG | 0.602230 | 4_1:+13148838 | Msa0536270:CDS |
| GATAGTCTTTGTGATTGCAG+AGG | 0.604046 | 4_1:-13148630 | None:intergenic |
| ACATGAGGAGAGTTCGAGGA+AGG | 0.604503 | 4_1:-13148561 | None:intergenic |
| CGACTTGCGTTACTTAAGGT+GGG | 0.606629 | 4_1:+13148672 | Msa0536270:CDS |
| TCAATGAAGTTTATATCCCT+AGG | 0.608817 | 4_1:-13147620 | None:intergenic |
| AATTTGCATACTTGTTAACA+GGG | 0.611009 | 4_1:+13143320 | Msa0536270:CDS |
| ACTAGAACATTTCGAAGACA+TGG | 0.620545 | 4_1:+13148729 | Msa0536270:CDS |
| GGAAGTTCGTGTAGTACATG+AGG | 0.620734 | 4_1:-13148576 | None:intergenic |
| AGTATCTTAGACCTTACACT+AGG | 0.631310 | 4_1:-13148931 | None:intergenic |
| GGTTCTTGATAAAATTGACA+AGG | 0.647463 | 4_1:+13148798 | Msa0536270:CDS |
| GGATTTCCATAAACATCACA+AGG | 0.647977 | 4_1:-13148895 | None:intergenic |
| AAAGTATGTGAAATCTGAGA+AGG | 0.668727 | 4_1:+13143459 | Msa0536270:CDS |
| TAACCATCTTGTGAGAAGAG+AGG | 0.676470 | 4_1:-13143640 | None:intergenic |
| TTCGAAGACATGGCGCATAG+CGG | 0.678985 | 4_1:+13148739 | Msa0536270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAACATAAATTAAAAA+AGG | - | chr4_1:13143680-13143699 | None:intergenic | 10.0% |
| !!! | TCAAAAATTTCATTTTTAAT+AGG | - | chr4_1:13146737-13146756 | None:intergenic | 10.0% |
| !! | ATTGGTATATTATAAAAAAA+AGG | + | chr4_1:13147396-13147415 | Msa0536270:intron | 10.0% |
| !! | TTAAATGATTCTAATATTGT+GGG | + | chr4_1:13143996-13144015 | Msa0536270:intron | 15.0% |
| !! | AAAAAAAATAGAATACACAT+AGG | + | chr4_1:13144125-13144144 | Msa0536270:intron | 15.0% |
| !! | AAAAAAATAGAATACACATA+GGG | + | chr4_1:13144126-13144145 | Msa0536270:intron | 15.0% |
| !!! | TCTGAAATCAATTTTTTTTA+AGG | - | chr4_1:13144357-13144376 | None:intergenic | 15.0% |
| !!! | ATAGAAATAAATTTTCAACA+TGG | - | chr4_1:13144803-13144822 | None:intergenic | 15.0% |
| !! | TTAAAACTTAACTATCAATA+AGG | - | chr4_1:13145181-13145200 | None:intergenic | 15.0% |
| !!! | TTATTGATAGTTAAGTTTTA+AGG | + | chr4_1:13145180-13145199 | Msa0536270:intron | 15.0% |
| !!! | TATTGATAGTTAAGTTTTAA+GGG | + | chr4_1:13145181-13145200 | Msa0536270:intron | 15.0% |
| !!! | ACATTAAATTTGTTATATTG+AGG | + | chr4_1:13146134-13146153 | Msa0536270:intron | 15.0% |
| !!! | TTCTTGTTAGAAATTTTTTA+TGG | + | chr4_1:13146394-13146413 | Msa0536270:intron | 15.0% |
| !!! | TCTTGTTAGAAATTTTTTAT+GGG | + | chr4_1:13146395-13146414 | Msa0536270:intron | 15.0% |
| !!! | AACAATCCAAATATTTTATT+TGG | - | chr4_1:13148156-13148175 | None:intergenic | 15.0% |
| !!! | TTACTTTTTTTGCATATTGA+AGG | - | chr4_1:13142964-13142983 | None:intergenic | 20.0% |
| !! | ATAATTTGAGAAAATAGAAG+TGG | + | chr4_1:13143860-13143879 | Msa0536270:intron | 20.0% |
| !! | GTTAAATGATTCTAATATTG+TGG | + | chr4_1:13143995-13144014 | Msa0536270:intron | 20.0% |
| !! | TAAATGATTCTAATATTGTG+GGG | + | chr4_1:13143997-13144016 | Msa0536270:intron | 20.0% |
| !! | ATAAAAAAACTTTGATGTTG+TGG | + | chr4_1:13144024-13144043 | Msa0536270:intron | 20.0% |
| !!! | AAAATTGATTTCAGAACATA+CGG | + | chr4_1:13144362-13144381 | Msa0536270:intron | 20.0% |
| !! | ATGAATAAATAATGAAGTGA+CGG | + | chr4_1:13144415-13144434 | Msa0536270:intron | 20.0% |
| !! | ATCTATAAATATCTCCTTTA+TGG | - | chr4_1:13144870-13144889 | None:intergenic | 20.0% |
| !! | CAATAAACTTAGTTAGTTAT+TGG | - | chr4_1:13145057-13145076 | None:intergenic | 20.0% |
| !! | TTAAAAGATAGCTATCAATA+GGG | - | chr4_1:13145448-13145467 | None:intergenic | 20.0% |
| !!! | TATTGATAGCTATCTTTTAA+GGG | + | chr4_1:13145448-13145467 | Msa0536270:intron | 20.0% |
| !! | ATAACTTATTCGTAGAATTT+GGG | + | chr4_1:13145492-13145511 | Msa0536270:intron | 20.0% |
| !!! | AATTTTACAGATTGGTTAAA+TGG | - | chr4_1:13145634-13145653 | None:intergenic | 20.0% |
| !!! | AGAAACAAAATTTTACAGAT+TGG | - | chr4_1:13145642-13145661 | None:intergenic | 20.0% |
| !! | TCCACAAAAAAATTCAAATT+TGG | + | chr4_1:13145824-13145843 | Msa0536270:intron | 20.0% |
| !!! | ACCAAATTTGAATTTTTTTG+TGG | - | chr4_1:13145828-13145847 | None:intergenic | 20.0% |
| !! | ACAAAAAAATTCAAATTTGG+TGG | + | chr4_1:13145827-13145846 | Msa0536270:intron | 20.0% |
| !!! | TGCAATTCTAGTAATTATTT+TGG | + | chr4_1:13146240-13146259 | Msa0536270:intron | 20.0% |
| !!! | TTTTTCTTTTTCTCTATTGT+TGG | + | chr4_1:13146339-13146358 | Msa0536270:intron | 20.0% |
| !!! | TTTTCTTTTTCTCTATTGTT+GGG | + | chr4_1:13146340-13146359 | Msa0536270:intron | 20.0% |
| !!! | CTTGTTAGAAATTTTTTATG+GGG | + | chr4_1:13146396-13146415 | Msa0536270:intron | 20.0% |
| !! | ATATCTATATCCTGAAAATA+TGG | - | chr4_1:13146425-13146444 | None:intergenic | 20.0% |
| !! | TAGCTAAATGTTATGTTATA+TGG | - | chr4_1:13146698-13146717 | None:intergenic | 20.0% |
| !!! | AAATGAAATTTTTGAGACTT+TGG | + | chr4_1:13146742-13146761 | Msa0536270:intron | 20.0% |
| !! | TTTCAAAAATGATGTCAAAT+TGG | + | chr4_1:13147378-13147397 | Msa0536270:intron | 20.0% |
| !! | ATGAAATTACAGTGTTTATT+AGG | - | chr4_1:13147518-13147537 | None:intergenic | 20.0% |
| !!! | TATTTTATTTGGTTCTGTTT+TGG | - | chr4_1:13148145-13148164 | None:intergenic | 20.0% |
| !! | ACAGAACCAAATAAAATATT+TGG | + | chr4_1:13148147-13148166 | Msa0536270:intron | 20.0% |
| !! | ATAACTTATACAATAATGGT+AGG | - | chr4_1:13148372-13148391 | None:intergenic | 20.0% |
| !! | GGTTATAACTTATACAATAA+TGG | - | chr4_1:13148376-13148395 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAGCATTTGAAAA+TGG | - | chr4_1:13148449-13148468 | None:intergenic | 20.0% |
| !!! | AAGAAGATGGTTTTGAATAA+GGG | - | chr4_1:13143240-13143259 | None:intergenic | 25.0% |
| !!! | TATGCAAATTTTGGTAGTTT+TGG | - | chr4_1:13143310-13143329 | None:intergenic | 25.0% |
| !! | GTTAACAAGTATGCAAATTT+TGG | - | chr4_1:13143319-13143338 | None:intergenic | 25.0% |
| !! | AAATTTGCATACTTGTTAAC+AGG | + | chr4_1:13143319-13143338 | Msa0536270:CDS | 25.0% |
| !! | AATTTGCATACTTGTTAACA+GGG | + | chr4_1:13143320-13143339 | Msa0536270:CDS | 25.0% |
| !!! | TGTTGCTTTGTTTCTTAAAA+GGG | + | chr4_1:13143573-13143592 | Msa0536270:CDS | 25.0% |
| ! | GAGTTTAATTAACCTCATTT+AGG | + | chr4_1:13143698-13143717 | Msa0536270:intron | 25.0% |
| ! | TTGAATGTAATTACATGTGT+TGG | + | chr4_1:13143883-13143902 | Msa0536270:intron | 25.0% |
| ! | ACACTTTCAAATTGAAGTAT+CGG | + | chr4_1:13143932-13143951 | Msa0536270:intron | 25.0% |
| !!! | GACTATGGATTTTAGAAAAA+TGG | - | chr4_1:13144270-13144289 | None:intergenic | 25.0% |
| !! | ATGATAATGTTCCAAAGAAT+GGG | - | chr4_1:13144310-13144329 | None:intergenic | 25.0% |
| ! | AAAATAATGGCATGTTTCTT+GGG | - | chr4_1:13144619-13144638 | None:intergenic | 25.0% |
| ! | AAAAATAATGGCATGTTTCT+TGG | - | chr4_1:13144620-13144639 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCAAAGTAGAAC+AGG | + | chr4_1:13144697-13144716 | Msa0536270:intron | 25.0% |
| ! | AAAAGAAAAGATGATAGTTG+TGG | + | chr4_1:13144733-13144752 | Msa0536270:intron | 25.0% |
| ! | ATGTTGATATCAGATATGAA+GGG | - | chr4_1:13144772-13144791 | None:intergenic | 25.0% |
| ! | AATGTTGATATCAGATATGA+AGG | - | chr4_1:13144773-13144792 | None:intergenic | 25.0% |
| !!! | AGATCTTTGTTTTCAGTATA+TGG | + | chr4_1:13144886-13144905 | Msa0536270:intron | 25.0% |
| ! | TTATCAATTGGTATAAGAGT+TGG | + | chr4_1:13145227-13145246 | Msa0536270:intron | 25.0% |
| ! | CTTAAAAGATAGCTATCAAT+AGG | - | chr4_1:13145449-13145468 | None:intergenic | 25.0% |
| !!! | CTATTGATAGCTATCTTTTA+AGG | + | chr4_1:13145447-13145466 | Msa0536270:intron | 25.0% |
| ! | GATAACTTATTCGTAGAATT+TGG | + | chr4_1:13145491-13145510 | Msa0536270:intron | 25.0% |
| ! | CCTGTAAAAATGTTTATAAG+TGG | - | chr4_1:13145570-13145589 | None:intergenic | 25.0% |
| !! | CCACTTATAAACATTTTTAC+AGG | + | chr4_1:13145567-13145586 | Msa0536270:intron | 25.0% |
| ! | TAAATTGTTTAAGTGCAACA+AGG | - | chr4_1:13145593-13145612 | None:intergenic | 25.0% |
| ! | ATTTCAAAATGATCAACCTA+TGG | + | chr4_1:13145945-13145964 | Msa0536270:intron | 25.0% |
| ! | AATTAACATTTCGCAATTTC+AGG | - | chr4_1:13146075-13146094 | None:intergenic | 25.0% |
| ! | TGATAATAGATTGAGACAAA+TGG | + | chr4_1:13146198-13146217 | Msa0536270:intron | 25.0% |
| !!! | TATTGATAATGTAGAAGACT+AGG | + | chr4_1:13146265-13146284 | Msa0536270:intron | 25.0% |
| ! | TGCTATAGATTAAGTTTAAG+TGG | + | chr4_1:13146471-13146490 | Msa0536270:intron | 25.0% |
| !!! | TGGTTCATTTGCTTTTATTT+TGG | + | chr4_1:13146491-13146510 | Msa0536270:intron | 25.0% |
| !!! | TGCGTTTTGCAATATTTTTT+TGG | + | chr4_1:13146537-13146556 | Msa0536270:intron | 25.0% |
| ! | AAGCAAAGAAGTTTCAAAAA+TGG | - | chr4_1:13146817-13146836 | None:intergenic | 25.0% |
| ! | GAAAATTCTGAATGATATGA+TGG | - | chr4_1:13147165-13147184 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAACTTTCATCA+TGG | - | chr4_1:13147369-13147388 | None:intergenic | 25.0% |
| !! | ATATATTTTCATTCATGCCT+AGG | + | chr4_1:13147603-13147622 | Msa0536270:CDS | 25.0% |
| !! | TATATTTTCATTCATGCCTA+GGG | + | chr4_1:13147604-13147623 | Msa0536270:CDS | 25.0% |
| ! | AACTTAGACAATGATATCAA+TGG | - | chr4_1:13147690-13147709 | None:intergenic | 25.0% |
| ! | TGAATTTGTCATTCATAGTT+CGG | + | chr4_1:13148269-13148288 | Msa0536270:intron | 25.0% |
| !!! | ATTCATAGTTCGGTTTTTTT+GGG | + | chr4_1:13148279-13148298 | Msa0536270:intron | 25.0% |
| ! | AAATGGTACATGTAAAGTAA+AGG | - | chr4_1:13148432-13148451 | None:intergenic | 25.0% |
| !! | CATTTAGCTAACAACATTTT+TGG | + | chr4_1:13148470-13148489 | Msa0536270:intron | 25.0% |
| !!! | TAACAACATTTTTGGTTTTC+AGG | + | chr4_1:13148478-13148497 | Msa0536270:intron | 25.0% |
| !!! | TGTTCTAGTTTCAAAGATAA+AGG | - | chr4_1:13148718-13148737 | None:intergenic | 25.0% |
| !! | TTGTCAATTTTATCAAGAAC+CGG | - | chr4_1:13148799-13148818 | None:intergenic | 25.0% |
| ! | GAAATTGATGTTGATACTAT+TGG | + | chr4_1:13148957-13148976 | Msa0536270:CDS | 25.0% |
| !! | AAAGACTATTTACACTGTTT+TGG | - | chr4_1:13149000-13149019 | None:intergenic | 25.0% |
| !!! | ACGACAACTTTCCTTATTTT+TGG | - | chr4_1:13142930-13142949 | None:intergenic | 30.0% |
| !!! | GTTTGGTTATGTTGTTTTGT+GGG | - | chr4_1:13142987-13143006 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTGTTCTTGAGAT+TGG | - | chr4_1:13143009-13143028 | None:intergenic | 30.0% |
| !! | TTATAAGCCATTTTCTTGGT+GGG | - | chr4_1:13143168-13143187 | None:intergenic | 30.0% |
| !! | ATTATAAGCCATTTTCTTGG+TGG | - | chr4_1:13143169-13143188 | None:intergenic | 30.0% |
| !!! | GAAGAAGATGGTTTTGAATA+AGG | - | chr4_1:13143241-13143260 | None:intergenic | 30.0% |
| ATCAAATCAGTTGTGAAACT+TGG | - | chr4_1:13143283-13143302 | None:intergenic | 30.0% | |
| AAAGTATGTGAAATCTGAGA+AGG | + | chr4_1:13143459-13143478 | Msa0536270:CDS | 30.0% | |
| ! | AATGTTATGGTTGTTGGTAA+AGG | + | chr4_1:13143499-13143518 | Msa0536270:CDS | 30.0% |
| !! | GGTGATTTGGTTACTTATAA+AGG | + | chr4_1:13143520-13143539 | Msa0536270:CDS | 30.0% |
| !! | CTGTTGCTTTGTTTCTTAAA+AGG | + | chr4_1:13143572-13143591 | Msa0536270:CDS | 30.0% |
| ATGTAGGCTTAATTAGATCA+AGG | + | chr4_1:13143726-13143745 | Msa0536270:intron | 30.0% | |
| !!! | AAGGTTTTAAATTACTGCCA+TGG | + | chr4_1:13143745-13143764 | Msa0536270:intron | 30.0% |
| TGATCTATGAATTATCGACA+TGG | + | chr4_1:13143796-13143815 | Msa0536270:intron | 30.0% | |
| ATCATTTAACTGCAATTCTC+AGG | - | chr4_1:13143985-13144004 | None:intergenic | 30.0% | |
| !! | ATTTTTAGAAACCTTAGCTG+TGG | + | chr4_1:13144067-13144086 | Msa0536270:intron | 30.0% |
| ! | TGACCTTAATTTGAAACACT+TGG | + | chr4_1:13144174-13144193 | Msa0536270:intron | 30.0% |
| ! | GACCTTAATTTGAAACACTT+GGG | + | chr4_1:13144175-13144194 | Msa0536270:intron | 30.0% |
| TTCCCAAGTGTTTCAAATTA+AGG | - | chr4_1:13144180-13144199 | None:intergenic | 30.0% | |
| ! | TGATAATGTTCCAAAGAATG+GGG | - | chr4_1:13144309-13144328 | None:intergenic | 30.0% |
| ! | GATGATAATGTTCCAAAGAA+TGG | - | chr4_1:13144311-13144330 | None:intergenic | 30.0% |
| ! | AATAATGAAGTGACGGAAAT+CGG | + | chr4_1:13144422-13144441 | Msa0536270:intron | 30.0% |
| TGCAGTTCAATACAATAACA+CGG | - | chr4_1:13144652-13144671 | None:intergenic | 30.0% | |
| TTTGCTTTCTATATTTGAGC+AGG | + | chr4_1:13144830-13144849 | Msa0536270:intron | 30.0% | |
| TTGCTTTCTATATTTGAGCA+GGG | + | chr4_1:13144831-13144850 | Msa0536270:intron | 30.0% | |
| ! | GTTTTCAGTATATGGATAGT+TGG | + | chr4_1:13144894-13144913 | Msa0536270:intron | 30.0% |
| AAATATGTTGCAGAACTTTG+AGG | + | chr4_1:13144950-13144969 | Msa0536270:intron | 30.0% | |
| TAATCCAACAATACTCTGAT+GGG | + | chr4_1:13145077-13145096 | Msa0536270:intron | 30.0% | |
| !!! | TGATAGTTAAGTTTTAAGGG+AGG | + | chr4_1:13145184-13145203 | Msa0536270:intron | 30.0% |
| !!! | GATAGTTAAGTTTTAAGGGA+GGG | + | chr4_1:13145185-13145204 | Msa0536270:intron | 30.0% |
| TAAGCCACTTAAATACTCTA+CGG | - | chr4_1:13145419-13145438 | None:intergenic | 30.0% | |
| AATAAGTTATCTAAGCACAC+GGG | - | chr4_1:13145482-13145501 | None:intergenic | 30.0% | |
| GAATAAGTTATCTAAGCACA+CGG | - | chr4_1:13145483-13145502 | None:intergenic | 30.0% | |
| ! | TTATTCGTAGAATTTGGGTT+TGG | + | chr4_1:13145497-13145516 | Msa0536270:intron | 30.0% |
| CTAACTCAACCGTTATAAAA+CGG | + | chr4_1:13145521-13145540 | Msa0536270:intron | 30.0% | |
| ! | CTTACAAGTCCGTTTTATAA+CGG | - | chr4_1:13145533-13145552 | None:intergenic | 30.0% |
| TATTGTTTATGTCAGAGACT+AGG | - | chr4_1:13146040-13146059 | None:intergenic | 30.0% | |
| AATTAGATTCATTTCTCCGT+TGG | + | chr4_1:13146091-13146110 | Msa0536270:intron | 30.0% | |
| TACAATTTCAAAGACCAAGT+GGG | + | chr4_1:13146300-13146319 | Msa0536270:intron | 30.0% | |
| TCTAACAAGAATCATTACAG+TGG | - | chr4_1:13146385-13146404 | None:intergenic | 30.0% | |
| !!! | GTTAGAAATTTTTTATGGGG+AGG | + | chr4_1:13146399-13146418 | Msa0536270:intron | 30.0% |
| ATTTCACATGATCAAAAGCT+TGG | + | chr4_1:13146610-13146629 | Msa0536270:intron | 30.0% | |
| !!! | AAATTTTTGAGACTTTGGTG+AGG | + | chr4_1:13146747-13146766 | Msa0536270:intron | 30.0% |
| TTCAGTGCAATCATAATTGT+CGG | + | chr4_1:13146940-13146959 | Msa0536270:intron | 30.0% | |
| ATTGAAAGAGGCAAAAATCT+AGG | - | chr4_1:13147052-13147071 | None:intergenic | 30.0% | |
| AGAGAAACAAGAATTGAAAG+AGG | - | chr4_1:13147064-13147083 | None:intergenic | 30.0% | |
| TGTTTCTCTTCTGTTTATGT+AGG | + | chr4_1:13147075-13147094 | Msa0536270:intron | 30.0% | |
| ATGGAAGTAATGAAGATGAT+GGG | - | chr4_1:13147108-13147127 | None:intergenic | 30.0% | |
| AATGGAAGTAATGAAGATGA+TGG | - | chr4_1:13147109-13147128 | None:intergenic | 30.0% | |
| !! | ATTTTCAGGGGAAGAAAAAA+TGG | - | chr4_1:13147127-13147146 | None:intergenic | 30.0% |
| ! | TGCTGATATGAAATTTTCAG+GGG | - | chr4_1:13147139-13147158 | None:intergenic | 30.0% |
| !! | GTGCTGATATGAAATTTTCA+GGG | - | chr4_1:13147140-13147159 | None:intergenic | 30.0% |
| AATTCTGAATGATATGATGG+AGG | - | chr4_1:13147162-13147181 | None:intergenic | 30.0% | |
| ! | ATCATTCAGAATTTTCAACC+TGG | + | chr4_1:13147169-13147188 | Msa0536270:intron | 30.0% |
| AGATAGAATCCAAAAGTGAA+GGG | - | chr4_1:13147213-13147232 | None:intergenic | 30.0% | |
| AAGATAGAATCCAAAAGTGA+AGG | - | chr4_1:13147214-13147233 | None:intergenic | 30.0% | |
| TGATAAAAACACTACGTAGT+TGG | - | chr4_1:13147433-13147452 | None:intergenic | 30.0% | |
| AATATATGCAAGAGATCTGA+AGG | - | chr4_1:13147590-13147609 | None:intergenic | 30.0% | |
| TCAATGAAGTTTATATCCCT+AGG | - | chr4_1:13147623-13147642 | None:intergenic | 30.0% | |
| ATTGAGCATACAAGCAATAT+GGG | + | chr4_1:13147638-13147657 | Msa0536270:CDS | 30.0% | |
| CTCTAATTGTGACTTTGATA+AGG | + | chr4_1:13147756-13147775 | Msa0536270:intron | 30.0% | |
| ! | TTCAAGTTATTCACAGGTAT+TGG | + | chr4_1:13147878-13147897 | Msa0536270:intron | 30.0% |
| TGGACAAAAATATAACGGTT+TGG | - | chr4_1:13148020-13148039 | None:intergenic | 30.0% | |
| GCTTCTGGACAAAAATATAA+CGG | - | chr4_1:13148025-13148044 | None:intergenic | 30.0% | |
| !!! | TTGTTTGGTGCTATTTGTTT+TGG | - | chr4_1:13148194-13148213 | None:intergenic | 30.0% |
| CTGAACTAAATAAGTTCGTT+TGG | - | chr4_1:13148245-13148264 | None:intergenic | 30.0% | |
| !!! | CATTCATAGTTCGGTTTTTT+TGG | + | chr4_1:13148278-13148297 | Msa0536270:intron | 30.0% |
| !!! | TTCATAGTTCGGTTTTTTTG+GGG | + | chr4_1:13148280-13148299 | Msa0536270:intron | 30.0% |
| AGCAGAAATTTGAACATGTT+CGG | - | chr4_1:13148397-13148416 | None:intergenic | 30.0% | |
| !! | AAAGATAAAGGCTGTTGTTT+TGG | - | chr4_1:13148706-13148725 | None:intergenic | 30.0% |
| GGTTCTTGATAAAATTGACA+AGG | + | chr4_1:13148798-13148817 | Msa0536270:CDS | 30.0% | |
| TAAAATTGACAAGGAACTGT+TGG | + | chr4_1:13148807-13148826 | Msa0536270:CDS | 30.0% | |
| AAAATTGACAAGGAACTGTT+GGG | + | chr4_1:13148808-13148827 | Msa0536270:CDS | 30.0% | |
| AATGATCCTTGTGATGTTTA+TGG | + | chr4_1:13148889-13148908 | Msa0536270:CDS | 30.0% | |
| ATGTTGTTAATCCTAGTGTA+AGG | + | chr4_1:13148920-13148939 | Msa0536270:CDS | 30.0% | |
| ! | CAGTGTAAATAGTCTTTTTG+TGG | + | chr4_1:13149003-13149022 | Msa0536270:exon | 30.0% |
| TTGCATATTGAAGGTGAAGA+GGG | - | chr4_1:13142955-13142974 | None:intergenic | 35.0% | |
| TTTGCATATTGAAGGTGAAG+AGG | - | chr4_1:13142956-13142975 | None:intergenic | 35.0% | |
| !!! | GGTTTGGTTATGTTGTTTTG+TGG | - | chr4_1:13142988-13143007 | None:intergenic | 35.0% |
| ! | GTTTGTTCTTGAGATTGGTT+TGG | - | chr4_1:13143004-13143023 | None:intergenic | 35.0% |
| TGAGTTTCCTATGTTGTTGT+CGG | - | chr4_1:13143042-13143061 | None:intergenic | 35.0% | |
| GAACTATGGTTTCGTTTCAT+TGG | - | chr4_1:13143109-13143128 | None:intergenic | 35.0% | |
| !! | GGGATTATAAGCCATTTTCT+TGG | - | chr4_1:13143172-13143191 | None:intergenic | 35.0% |
| GAAGTGAGATTGTTAAGGTT+GGG | - | chr4_1:13143192-13143211 | None:intergenic | 35.0% | |
| AGAAGTGAGATTGTTAAGGT+TGG | - | chr4_1:13143193-13143212 | None:intergenic | 35.0% | |
| GAGAAGAAGTGAGATTGTTA+AGG | - | chr4_1:13143197-13143216 | None:intergenic | 35.0% | |
| GAAGAAAGAGATGAAGAAGA+TGG | - | chr4_1:13143253-13143272 | None:intergenic | 35.0% | |
| ! | TACTTGTTAACAGGGACAAA+AGG | + | chr4_1:13143328-13143347 | Msa0536270:CDS | 35.0% |
| TGAAGTTTCACAGCTCAAAA+GGG | + | chr4_1:13143351-13143370 | Msa0536270:CDS | 35.0% | |
| TGAAGCAGGTAATAGTTTCT+TGG | - | chr4_1:13143397-13143416 | None:intergenic | 35.0% | |
| !!! | AGAAGGTGTTTGGTGTTTTT+GGG | + | chr4_1:13143476-13143495 | Msa0536270:CDS | 35.0% |
| !!! | TGGTGTTTTTGGGAATGTTA+TGG | + | chr4_1:13143486-13143505 | Msa0536270:CDS | 35.0% |
| TTTGGGAATGTTATGGTTGT+TGG | + | chr4_1:13143493-13143512 | Msa0536270:CDS | 35.0% | |
| ! | AGTGTTGAAGCAATCATAGT+AGG | - | chr4_1:13143547-13143566 | None:intergenic | 35.0% |
| !! | GCTTTGTTTCTTAAAAGGGT+TGG | + | chr4_1:13143577-13143596 | Msa0536270:CDS | 35.0% |
| !! | TTCTTAAAAGGGTTGGTGAT+TGG | + | chr4_1:13143584-13143603 | Msa0536270:CDS | 35.0% |
| !! | TCTTAAAAGGGTTGGTGATT+GGG | + | chr4_1:13143585-13143604 | Msa0536270:CDS | 35.0% |
| TTTAAATTACTGCCATGGTC+TGG | + | chr4_1:13143750-13143769 | Msa0536270:intron | 35.0% | |
| !! | TTGAAGTATCGGTGCTAAAT+AGG | + | chr4_1:13143943-13143962 | Msa0536270:intron | 35.0% |
| !! | GAATACACATAGGGTTGATA+CGG | + | chr4_1:13144135-13144154 | Msa0536270:intron | 35.0% |
| !!! | GCACAGTTCTTTTAAAACGA+TGG | - | chr4_1:13144225-13144244 | None:intergenic | 35.0% |
| TCATCATAGAAATGCTTTCG+AGG | + | chr4_1:13144326-13144345 | Msa0536270:intron | 35.0% | |
| ! | ATAATGAAGTGACGGAAATC+GGG | + | chr4_1:13144423-13144442 | Msa0536270:intron | 35.0% |
| ! | CGGTGAAGTGCTAAAAATAA+TGG | - | chr4_1:13144632-13144651 | None:intergenic | 35.0% |
| TGCTTTCTATATTTGAGCAG+GGG | + | chr4_1:13144832-13144851 | Msa0536270:intron | 35.0% | |
| GGTACATATCGTAACCATAA+AGG | + | chr4_1:13144853-13144872 | Msa0536270:intron | 35.0% | |
| TATGGATAGTTGGATACATC+AGG | + | chr4_1:13144904-13144923 | Msa0536270:intron | 35.0% | |
| GTAATCCAACAATACTCTGA+TGG | + | chr4_1:13145076-13145095 | Msa0536270:intron | 35.0% | |
| AATCCAACAATACTCTGATG+GGG | + | chr4_1:13145078-13145097 | Msa0536270:intron | 35.0% | |
| TGATAAGTATCCAAGCACTT+TGG | - | chr4_1:13145213-13145232 | None:intergenic | 35.0% | |
| GTGCTTGGATACTTATCAAT+TGG | + | chr4_1:13145215-13145234 | Msa0536270:intron | 35.0% | |
| TACTACTCGATGTTGGATTT+GGG | - | chr4_1:13145387-13145406 | None:intergenic | 35.0% | |
| ATACTACTCGATGTTGGATT+TGG | - | chr4_1:13145388-13145407 | None:intergenic | 35.0% | |
| AAATCCAACATCGAGTAGTA+TGG | + | chr4_1:13145387-13145406 | Msa0536270:intron | 35.0% | |
| AATCCAACATCGAGTAGTAT+GGG | + | chr4_1:13145388-13145407 | Msa0536270:intron | 35.0% | |
| ! | TGATCCGTAGAGTATTTAAG+TGG | + | chr4_1:13145412-13145431 | Msa0536270:intron | 35.0% |
| !! | TGATAGCTATCTTTTAAGGG+AGG | + | chr4_1:13145451-13145470 | Msa0536270:intron | 35.0% |
| !! | GATAGCTATCTTTTAAGGGA+GGG | + | chr4_1:13145452-13145471 | Msa0536270:intron | 35.0% |
| !! | ATAGCTATCTTTTAAGGGAG+GGG | + | chr4_1:13145453-13145472 | Msa0536270:intron | 35.0% |
| ATAAGTTATCTAAGCACACG+GGG | - | chr4_1:13145481-13145500 | None:intergenic | 35.0% | |
| ! | CGTTTTATAACGGTTGAGTT+AGG | - | chr4_1:13145523-13145542 | None:intergenic | 35.0% |
| ! | CGTTATAAAACGGACTTGTA+AGG | + | chr4_1:13145531-13145550 | Msa0536270:intron | 35.0% |
| !! | CAAGCAACAGTTTGCTAAAT+AGG | - | chr4_1:13145730-13145749 | None:intergenic | 35.0% |
| TTGCTTGTGTCTTAGTCATA+GGG | + | chr4_1:13145743-13145762 | Msa0536270:intron | 35.0% | |
| GTTGATACATTCCTACAGAT+GGG | - | chr4_1:13145906-13145925 | None:intergenic | 35.0% | |
| AATATCGTTTGTCAGAGACT+AGG | - | chr4_1:13145928-13145947 | None:intergenic | 35.0% | |
| TGTAGGACTGTATCAACTTA+TGG | + | chr4_1:13145975-13145994 | Msa0536270:intron | 35.0% | |
| TTTCTCCGTTGGTATTTGTA+CGG | + | chr4_1:13146102-13146121 | Msa0536270:intron | 35.0% | |
| ATAGTCCGTACAAATACCAA+CGG | - | chr4_1:13146110-13146129 | None:intergenic | 35.0% | |
| !! | CACTTGGTCTTTGAAATTGT+AGG | - | chr4_1:13146301-13146320 | None:intergenic | 35.0% |
| CTACAATTTCAAAGACCAAG+TGG | + | chr4_1:13146299-13146318 | Msa0536270:intron | 35.0% | |
| ACAATTTCAAAGACCAAGTG+GGG | + | chr4_1:13146301-13146320 | Msa0536270:intron | 35.0% | |
| ACAAAAGTAAATACCCCACT+TGG | - | chr4_1:13146317-13146336 | None:intergenic | 35.0% | |
| !!! | GGTGCTGATATGAAATTTTC+AGG | - | chr4_1:13147141-13147160 | None:intergenic | 35.0% |
| TGAAGCTTGGTTGAAAAACA+TGG | - | chr4_1:13147300-13147319 | None:intergenic | 35.0% | |
| ! | ATCTGAAGGAAGAAGGTATA+TGG | - | chr4_1:13147576-13147595 | None:intergenic | 35.0% |
| CATTGAGCATACAAGCAATA+TGG | + | chr4_1:13147637-13147656 | Msa0536270:CDS | 35.0% | |
| TGGATCTATAATGATAGGTC+TGG | - | chr4_1:13147792-13147811 | None:intergenic | 35.0% | |
| AGACCTATCATTATAGATCC+AGG | + | chr4_1:13147791-13147810 | Msa0536270:CDS | 35.0% | |
| AAGCCTGGATCTATAATGAT+AGG | - | chr4_1:13147797-13147816 | None:intergenic | 35.0% | |
| TAACTTGAACGAAGATGGTA+GGG | - | chr4_1:13147867-13147886 | None:intergenic | 35.0% | |
| ATAACTTGAACGAAGATGGT+AGG | - | chr4_1:13147868-13147887 | None:intergenic | 35.0% | |
| GTGAATAACTTGAACGAAGA+TGG | - | chr4_1:13147872-13147891 | None:intergenic | 35.0% | |
| ! | TCTTCGTTCAAGTTATTCAC+AGG | + | chr4_1:13147872-13147891 | Msa0536270:CDS | 35.0% |
| CTTATTTACTCCTTAGTTGC+TGG | + | chr4_1:13147928-13147947 | Msa0536270:intron | 35.0% | |
| ! | TTGGTTCAGTTTTACTGAGT+TGG | - | chr4_1:13148001-13148020 | None:intergenic | 35.0% |
| ! | ATTTTTGTCCAGAAGCGAAA+TGG | + | chr4_1:13148029-13148048 | Msa0536270:intron | 35.0% |
| !! | TATAGCTTGGTTTTCTGTCA+AGG | - | chr4_1:13148103-13148122 | None:intergenic | 35.0% |
| ! | TCAGTTCGAAAAGTATAGCT+TGG | - | chr4_1:13148116-13148135 | None:intergenic | 35.0% |
| !!! | CTATCTGTCACAGTTTTGTT+TGG | - | chr4_1:13148209-13148228 | None:intergenic | 35.0% |
| !!! | TCATAGTTCGGTTTTTTTGG+GGG | + | chr4_1:13148281-13148300 | Msa0536270:intron | 35.0% |
| TATACACAGAACTCGAGAAA+CGG | - | chr4_1:13148529-13148548 | None:intergenic | 35.0% | |
| TTTCTCGAGTTCTGTGTATA+TGG | + | chr4_1:13148529-13148548 | Msa0536270:CDS | 35.0% | |
| !!! | ATAAAGGCTGTTGTTTTGGA+GGG | - | chr4_1:13148702-13148721 | None:intergenic | 35.0% |
| ACTAGAACATTTCGAAGACA+TGG | + | chr4_1:13148729-13148748 | Msa0536270:CDS | 35.0% | |
| !! | TGTGTTGGTAGTCATCTTAA+GGG | + | chr4_1:13148865-13148884 | Msa0536270:CDS | 35.0% |
| GGATTTCCATAAACATCACA+AGG | - | chr4_1:13148898-13148917 | None:intergenic | 35.0% | |
| ACACTAGGATTAACAACATC+TGG | - | chr4_1:13148919-13148938 | None:intergenic | 35.0% | |
| AGTATCTTAGACCTTACACT+AGG | - | chr4_1:13148934-13148953 | None:intergenic | 35.0% | |
| !!! | TTGTCGGTGTTACAAGGTTT+TGG | - | chr4_1:13143026-13143045 | None:intergenic | 40.0% |
| !! | ATGTTGTTGTCGGTGTTACA+AGG | - | chr4_1:13143032-13143051 | None:intergenic | 40.0% |
| TGTAACACCGACAACAACAT+AGG | + | chr4_1:13143032-13143051 | Msa0536270:five_prime_UTR | 40.0% | |
| !!! | ATTTTCTTGGTGGGTTATGG+TGG | - | chr4_1:13143159-13143178 | None:intergenic | 40.0% |
| ACCATAACCCACCAAGAAAA+TGG | + | chr4_1:13143158-13143177 | Msa0536270:CDS | 40.0% | |
| GTGAAGTTTCACAGCTCAAA+AGG | + | chr4_1:13143350-13143369 | Msa0536270:CDS | 40.0% | |
| CTTCAAGATCAAGATGAAGC+AGG | - | chr4_1:13143411-13143430 | None:intergenic | 40.0% | |
| TTGAAGCTTCTAGTGAAGAG+AGG | + | chr4_1:13143425-13143444 | Msa0536270:CDS | 40.0% | |
| TAGTGAAGAGAGGATTGAGT+TGG | + | chr4_1:13143435-13143454 | Msa0536270:CDS | 40.0% | |
| !! | GTGAAATCTGAGAAGGTGTT+TGG | + | chr4_1:13143466-13143485 | Msa0536270:CDS | 40.0% |
| !!! | GAGAAGGTGTTTGGTGTTTT+TGG | + | chr4_1:13143475-13143494 | Msa0536270:CDS | 40.0% |
| ! | GGTTGTTGGTAAAGGTGATT+TGG | + | chr4_1:13143507-13143526 | Msa0536270:CDS | 40.0% |
| TATCCTCTCTTCTCACAAGA+TGG | + | chr4_1:13143637-13143656 | Msa0536270:CDS | 40.0% | |
| TAACCATCTTGTGAGAAGAG+AGG | - | chr4_1:13143643-13143662 | None:intergenic | 40.0% | |
| CCTACATTTGAGCCTAAATG+AGG | - | chr4_1:13143713-13143732 | None:intergenic | 40.0% | |
| CCTCATTTAGGCTCAAATGT+AGG | + | chr4_1:13143710-13143729 | Msa0536270:intron | 40.0% | |
| TAAAATCTGTGACCAGACCA+TGG | - | chr4_1:13143765-13143784 | None:intergenic | 40.0% | |
| !! | AATTACATGTGTTGGTGTCG+TGG | + | chr4_1:13143891-13143910 | Msa0536270:intron | 40.0% |
| AATGTCTGCAAGTGTGATCT+GGG | - | chr4_1:13144050-13144069 | None:intergenic | 40.0% | |
| AAATGTCTGCAAGTGTGATC+TGG | - | chr4_1:13144051-13144070 | None:intergenic | 40.0% | |
| TGTGGTTACACTGTGATCTT+TGG | + | chr4_1:13144085-13144104 | Msa0536270:intron | 40.0% | |
| GAAACACTTGGGAACTTCTT+TGG | + | chr4_1:13144186-13144205 | Msa0536270:intron | 40.0% | |
| ! | TCACTGTATTTTCTGCTGCA+TGG | + | chr4_1:13144518-13144537 | Msa0536270:intron | 40.0% |
| ! | CACTGTATTTTCTGCTGCAT+GGG | + | chr4_1:13144519-13144538 | Msa0536270:intron | 40.0% |
| ! | ACTGTATTTTCTGCTGCATG+GGG | + | chr4_1:13144520-13144539 | Msa0536270:intron | 40.0% |
| AAGACTAATGCAGCGATTGA+AGG | - | chr4_1:13144554-13144573 | None:intergenic | 40.0% | |
| !! | TCAATCGCTGCATTAGTCTT+TGG | + | chr4_1:13144554-13144573 | Msa0536270:intron | 40.0% |
| !!! | AGTCTTTGGTTTTCTTGCCA+AGG | + | chr4_1:13144568-13144587 | Msa0536270:intron | 40.0% |
| CATGTTTCTTGGGTACACAA+GGG | - | chr4_1:13144609-13144628 | None:intergenic | 40.0% | |
| AGTTGGATACATCAGGAAGT+TGG | + | chr4_1:13144911-13144930 | Msa0536270:intron | 40.0% | |
| !! | AGTGTCATTTAAGACAGCTG+GGG | - | chr4_1:13145000-13145019 | None:intergenic | 40.0% |
| !! | CAGTGTCATTTAAGACAGCT+GGG | - | chr4_1:13145001-13145020 | None:intergenic | 40.0% |
| !! | TCAGTGTCATTTAAGACAGC+TGG | - | chr4_1:13145002-13145021 | None:intergenic | 40.0% |
| ATGGGGACTTTGGTATTATG+AGG | + | chr4_1:13145095-13145114 | Msa0536270:intron | 40.0% | |
| GTTGCTTGTGTCTTAGTCAT+AGG | + | chr4_1:13145742-13145761 | Msa0536270:intron | 40.0% | |
| !! | AAGTTTTGTCGACGGAAGAT+GGG | + | chr4_1:13145801-13145820 | Msa0536270:intron | 40.0% |
| ! | TTCAAATTTGGTGGCTTCGA+CGG | + | chr4_1:13145836-13145855 | Msa0536270:intron | 40.0% |
| ACATTCCTACAGATGGGTAA+AGG | - | chr4_1:13145900-13145919 | None:intergenic | 40.0% | |
| ! | GGTTGATACATTCCTACAGA+TGG | - | chr4_1:13145907-13145926 | None:intergenic | 40.0% |
| GTTTATGTCAGAGACTAGGT+TGG | - | chr4_1:13146036-13146055 | None:intergenic | 40.0% | |
| !!! | TTATTTTGGTCCGCTAACCA+CGG | + | chr4_1:13146505-13146524 | Msa0536270:intron | 40.0% |
| TCACATGATCAAAAGCTTGG+AGG | + | chr4_1:13146613-13146632 | Msa0536270:intron | 40.0% | |
| CAAAAATGGAGAACAAGCAG+AGG | - | chr4_1:13146803-13146822 | None:intergenic | 40.0% | |
| ACAAACACAGACACATACAC+CGG | + | chr4_1:13146861-13146880 | Msa0536270:intron | 40.0% | |
| ! | ATCAGTATTTCTGTCGTGTC+CGG | - | chr4_1:13146883-13146902 | None:intergenic | 40.0% |
| AATGAAGCACAGAAACTCCT+CGG | - | chr4_1:13147008-13147027 | None:intergenic | 40.0% | |
| TGCTTCATTACTCCCTTCTT+GGG | + | chr4_1:13147019-13147038 | Msa0536270:intron | 40.0% | |
| CTAGGAATAGAACCCAAGAA+GGG | - | chr4_1:13147034-13147053 | None:intergenic | 40.0% | |
| TCTAGGAATAGAACCCAAGA+AGG | - | chr4_1:13147035-13147054 | None:intergenic | 40.0% | |
| AAAAGAGACGACGTTTACCA+GGG | - | chr4_1:13147262-13147281 | None:intergenic | 40.0% | |
| CTATATAGTGGCTGGAGAAA+GGG | - | chr4_1:13147325-13147344 | None:intergenic | 40.0% | |
| ACTATATAGTGGCTGGAGAA+AGG | - | chr4_1:13147326-13147345 | None:intergenic | 40.0% | |
| AGCATACAAGCAATATGGGT+TGG | + | chr4_1:13147642-13147661 | Msa0536270:CDS | 40.0% | |
| ATCCAGGCTTGTATCATTCA+AGG | + | chr4_1:13147807-13147826 | Msa0536270:CDS | 40.0% | |
| TCCAGGCTTGTATCATTCAA+GGG | + | chr4_1:13147808-13147827 | Msa0536270:CDS | 40.0% | |
| CATGAATAGACCAGCAACTA+AGG | - | chr4_1:13147941-13147960 | None:intergenic | 40.0% | |
| ! | CTTAGTTGCTGGTCTATTCA+TGG | + | chr4_1:13147939-13147958 | Msa0536270:intron | 40.0% |
| ! | TTGCTGGTCTATTCATGGTT+CGG | + | chr4_1:13147944-13147963 | Msa0536270:intron | 40.0% |
| !! | GTTCAGTTTTACTGAGTTGG+AGG | - | chr4_1:13147998-13148017 | None:intergenic | 40.0% |
| CCTTTATACCATTTCGCTTC+TGG | - | chr4_1:13148040-13148059 | None:intergenic | 40.0% | |
| CCAGAAGCGAAATGGTATAA+AGG | + | chr4_1:13148037-13148056 | Msa0536270:intron | 40.0% | |
| TGGTATAAAGGTTCAGTGAC+CGG | + | chr4_1:13148049-13148068 | Msa0536270:intron | 40.0% | |
| TTCGGTTCAGATCACAAAAC+CGG | - | chr4_1:13148071-13148090 | None:intergenic | 40.0% | |
| !! | CTGTCAAGGTAGTTTTGCTT+CGG | - | chr4_1:13148089-13148108 | None:intergenic | 40.0% |
| !!! | CATAGTTCGGTTTTTTTGGG+GGG | + | chr4_1:13148282-13148301 | Msa0536270:intron | 40.0% |
| CAAATTTCTGCTCTGTTGCT+TGG | + | chr4_1:13148405-13148424 | Msa0536270:intron | 40.0% | |
| !!! | TTTGGTTTTCAGGCTCTGAA+TGG | + | chr4_1:13148488-13148507 | Msa0536270:intron | 40.0% |
| !!! | TTGGTTTTCAGGCTCTGAAT+GGG | + | chr4_1:13148489-13148508 | Msa0536270:intron | 40.0% |
| !! | ACTCGAGAAACGGTTTTGTA+AGG | - | chr4_1:13148519-13148538 | None:intergenic | 40.0% |
| TCGAGTTCTGTGTATATGGT+TGG | + | chr4_1:13148533-13148552 | Msa0536270:CDS | 40.0% | |
| CGAGTTCTGTGTATATGGTT+GGG | + | chr4_1:13148534-13148553 | Msa0536270:CDS | 40.0% | |
| AACTTCCTTTCTTCGAACGA+AGG | + | chr4_1:13148592-13148611 | Msa0536270:CDS | 40.0% | |
| AATAGCCTTCGTTCGAAGAA+AGG | - | chr4_1:13148600-13148619 | None:intergenic | 40.0% | |
| GATAGTCTTTGTGATTGCAG+AGG | - | chr4_1:13148633-13148652 | None:intergenic | 40.0% | |
| !!! | GATAAAGGCTGTTGTTTTGG+AGG | - | chr4_1:13148703-13148722 | None:intergenic | 40.0% |
| TTGTCGAATCTACGAGCAAA+AGG | - | chr4_1:13148769-13148788 | None:intergenic | 40.0% | |
| ! | TTTTGCTCGTAGATTCGACA+AGG | + | chr4_1:13148768-13148787 | Msa0536270:CDS | 40.0% |
| AAGGAACTGTTGGGAAGATT+GGG | + | chr4_1:13148817-13148836 | Msa0536270:CDS | 40.0% | |
| !! | GTGTGTTGGTAGTCATCTTA+AGG | + | chr4_1:13148864-13148883 | Msa0536270:CDS | 40.0% |
| !!! | GCCATTTTCTTGGTGGGTTA+TGG | - | chr4_1:13143162-13143181 | None:intergenic | 45.0% |
| !! | AAAGGGTTGGTGATTGGGAT+TGG | + | chr4_1:13143590-13143609 | Msa0536270:CDS | 45.0% |
| TCACAGTGTAACCACAGCTA+AGG | - | chr4_1:13144081-13144100 | None:intergenic | 45.0% | |
| TAAAAGAACTGTGCGCAGTG+TGG | + | chr4_1:13144231-13144250 | Msa0536270:intron | 45.0% | |
| !! | TGGATTAGCAGATGGGACTA+TGG | - | chr4_1:13144285-13144304 | None:intergenic | 45.0% |
| AATGTTCCAAAGAATGGGGC+TGG | - | chr4_1:13144305-13144324 | None:intergenic | 45.0% | |
| AATGCAGCGATTGAAGGACA+AGG | - | chr4_1:13144548-13144567 | None:intergenic | 45.0% | |
| GCATGTTTCTTGGGTACACA+AGG | - | chr4_1:13144610-13144629 | None:intergenic | 45.0% | |
| CTTAGTTAGTTATTGGCCCC+AGG | - | chr4_1:13145050-13145069 | None:intergenic | 45.0% | |
| !! | AGTCCCCATCAGAGTATTGT+TGG | - | chr4_1:13145084-13145103 | None:intergenic | 45.0% |
| CAATACTCTGATGGGGACTT+TGG | + | chr4_1:13145085-13145104 | Msa0536270:intron | 45.0% | |
| !! | GGATGCTTGGTGATGTAAAG+TGG | + | chr4_1:13145145-13145164 | Msa0536270:intron | 45.0% |
| ! | AGAGTTGGTTGCCAGTGAAT+CGG | + | chr4_1:13145242-13145261 | Msa0536270:intron | 45.0% |
| TGACAGGGAGTTGGGTATTA+TGG | + | chr4_1:13145357-13145376 | Msa0536270:intron | 45.0% | |
| GACAGGGAGTTGGGTATTAT+GGG | + | chr4_1:13145358-13145377 | Msa0536270:intron | 45.0% | |
| ACAGGGAGTTGGGTATTATG+GGG | + | chr4_1:13145359-13145378 | Msa0536270:intron | 45.0% | |
| CATCCCATACTACTCGATGT+TGG | - | chr4_1:13145394-13145413 | None:intergenic | 45.0% | |
| !! | GTGGTGAGGAGAAAAGTGTT+AGG | - | chr4_1:13145667-13145686 | None:intergenic | 45.0% |
| ! | AACACTTTTCTCCTCACCAC+CGG | + | chr4_1:13145667-13145686 | Msa0536270:intron | 45.0% |
| CCTCATATAAGTTGCACCAC+CGG | - | chr4_1:13145689-13145708 | None:intergenic | 45.0% | |
| GTGGTGCAACTTATATGAGG+CGG | + | chr4_1:13145689-13145708 | Msa0536270:intron | 45.0% | |
| !! | GAAGTTTTGTCGACGGAAGA+TGG | + | chr4_1:13145800-13145819 | Msa0536270:intron | 45.0% |
| CTTGACCTTTACCCATCTGT+AGG | + | chr4_1:13145892-13145911 | Msa0536270:intron | 45.0% | |
| CAACCTATGGCTTACACTGT+AGG | + | chr4_1:13145958-13145977 | Msa0536270:intron | 45.0% | |
| AGTCCTACAGTGTAAGCCAT+AGG | - | chr4_1:13145964-13145983 | None:intergenic | 45.0% | |
| GTTGGTACAGTCCTACAGAT+GGG | - | chr4_1:13146018-13146037 | None:intergenic | 45.0% | |
| ! | TATGGGGAGGCCATATTTTC+AGG | + | chr4_1:13146412-13146431 | Msa0536270:intron | 45.0% |
| !! | AAGTATCGAACCGTGGTTAG+CGG | - | chr4_1:13146518-13146537 | None:intergenic | 45.0% |
| !! | AAAACGCAAGTATCGAACCG+TGG | - | chr4_1:13146525-13146544 | None:intergenic | 45.0% |
| TGATCAAAAGCTTGGAGGTG+AGG | + | chr4_1:13146618-13146637 | Msa0536270:intron | 45.0% | |
| AAATGGAGAACAAGCAGAGG+CGG | - | chr4_1:13146800-13146819 | None:intergenic | 45.0% | |
| GTGCTTCATTACTCCCTTCT+TGG | + | chr4_1:13147018-13147037 | Msa0536270:intron | 45.0% | |
| ATCGCGAGATGCAATAATCC+AGG | - | chr4_1:13147190-13147209 | None:intergenic | 45.0% | |
| TTTACCAGGGTATGCAGCTT+GGG | - | chr4_1:13147249-13147268 | None:intergenic | 45.0% | |
| CAAAAGAGACGACGTTTACC+AGG | - | chr4_1:13147263-13147282 | None:intergenic | 45.0% | |
| ! | TGGAGAAAGGGTTTGAAGCT+TGG | - | chr4_1:13147313-13147332 | None:intergenic | 45.0% |
| GGAAGCAACTATATAGTGGC+TGG | - | chr4_1:13147333-13147352 | None:intergenic | 45.0% | |
| GCACGGAAGCAACTATATAG+TGG | - | chr4_1:13147337-13147356 | None:intergenic | 45.0% | |
| CTATATAGTTGCTTCCGTGC+AGG | + | chr4_1:13147337-13147356 | Msa0536270:intron | 45.0% | |
| CATCATGGTGAATACCTGCA+CGG | - | chr4_1:13147354-13147373 | None:intergenic | 45.0% | |
| GCAAGAGATCTGAAGGAAGA+AGG | - | chr4_1:13147583-13147602 | None:intergenic | 45.0% | |
| ACCCTTGAATGATACAAGCC+TGG | - | chr4_1:13147812-13147831 | None:intergenic | 45.0% | |
| !! | GTCTATTCATGGTTCGGTTC+TGG | + | chr4_1:13147950-13147969 | Msa0536270:intron | 45.0% |
| GTTGGAGGTTCAGTTCGATT+CGG | - | chr4_1:13147983-13148002 | None:intergenic | 45.0% | |
| TAGTACATGAGGAGAGTTCG+AGG | - | chr4_1:13148568-13148587 | None:intergenic | 45.0% | |
| GGAAGTTCGTGTAGTACATG+AGG | - | chr4_1:13148579-13148598 | None:intergenic | 45.0% | |
| TGTGATTGCAGAGGACAGTA+TGG | - | chr4_1:13148624-13148643 | None:intergenic | 45.0% | |
| ACCACGACTTGCGTTACTTA+AGG | + | chr4_1:13148668-13148687 | Msa0536270:CDS | 45.0% | |
| ACCTTAAGTAACGCAAGTCG+TGG | - | chr4_1:13148672-13148691 | None:intergenic | 45.0% | |
| ACGACTTGCGTTACTTAAGG+TGG | + | chr4_1:13148671-13148690 | Msa0536270:CDS | 45.0% | |
| CGACTTGCGTTACTTAAGGT+GGG | + | chr4_1:13148672-13148691 | Msa0536270:CDS | 45.0% | |
| TAGATTCGACAAGGACGATC+CGG | + | chr4_1:13148777-13148796 | Msa0536270:CDS | 45.0% | |
| CAAGGAACTGTTGGGAAGAT+TGG | + | chr4_1:13148816-13148835 | Msa0536270:CDS | 45.0% | |
| !! | TTTGGTGGTGGTGGGAACTA+TGG | - | chr4_1:13143123-13143142 | None:intergenic | 50.0% |
| !!! | TGTTGTGGTGGTTTTGGTGG+TGG | - | chr4_1:13143135-13143154 | None:intergenic | 50.0% |
| !!! | GGTTGTTGTGGTGGTTTTGG+TGG | - | chr4_1:13143138-13143157 | None:intergenic | 50.0% |
| ! | GGTGGTTGTTGTGGTGGTTT+TGG | - | chr4_1:13143141-13143160 | None:intergenic | 50.0% |
| GGTTATGGTGGTTGTTGTGG+TGG | - | chr4_1:13143147-13143166 | None:intergenic | 50.0% | |
| ! | GTGGGTTATGGTGGTTGTTG+TGG | - | chr4_1:13143150-13143169 | None:intergenic | 50.0% |
| !! | ATGGGGCTGGATTAGCAGAT+GGG | - | chr4_1:13144292-13144311 | None:intergenic | 50.0% |
| !! | AATGGGGCTGGATTAGCAGA+TGG | - | chr4_1:13144293-13144312 | None:intergenic | 50.0% |
| GCTAATCCAGCCCCATTCTT+TGG | + | chr4_1:13144296-13144315 | Msa0536270:intron | 50.0% | |
| ! | AAGTGACGGAAATCGGGTAG+AGG | + | chr4_1:13144429-13144448 | Msa0536270:intron | 50.0% |
| ! | GGTTTTCTTGCCAAGGCCTT+TGG | + | chr4_1:13144575-13144594 | Msa0536270:intron | 50.0% |
| ATGTCCCACATCGAGTAGTG+TGG | + | chr4_1:13145123-13145142 | Msa0536270:intron | 50.0% | |
| TGTCCCACATCGAGTAGTGT+GGG | + | chr4_1:13145124-13145143 | Msa0536270:intron | 50.0% | |
| CATCCCACACTACTCGATGT+GGG | - | chr4_1:13145130-13145149 | None:intergenic | 50.0% | |
| ATCGAGTAGTGTGGGATGCT+TGG | + | chr4_1:13145132-13145151 | Msa0536270:intron | 50.0% | |
| TGGTTGCCAGTGAATCGGAA+AGG | + | chr4_1:13145247-13145266 | Msa0536270:intron | 50.0% | |
| GGTAGTCCTTTCCGATTCAC+TGG | - | chr4_1:13145256-13145275 | None:intergenic | 50.0% | |
| TCGGAAAGGACTACCTACAG+AGG | + | chr4_1:13145261-13145280 | Msa0536270:intron | 50.0% | |
| CGGAAAGGACTACCTACAGA+GGG | + | chr4_1:13145262-13145281 | Msa0536270:intron | 50.0% | |
| GGAAAGGACTACCTACAGAG+GGG | + | chr4_1:13145263-13145282 | Msa0536270:intron | 50.0% | |
| !! | GCCGAGTGAAGTATCGTAGA+GGG | + | chr4_1:13145298-13145317 | Msa0536270:intron | 50.0% |
| GCCCTCTACGATACTTCACT+CGG | - | chr4_1:13145302-13145321 | None:intergenic | 50.0% | |
| !! | TGTCGGGACATTGGCTCTAA+GGG | + | chr4_1:13145325-13145344 | Msa0536270:intron | 50.0% |
| ! | TAAGGGCAGGTGCTATGACA+GGG | + | chr4_1:13145342-13145361 | Msa0536270:intron | 50.0% |
| ! | AGGTGCTATGACAGGGAGTT+GGG | + | chr4_1:13145349-13145368 | Msa0536270:intron | 50.0% |
| CATATAAGTTGCACCACCGG+TGG | - | chr4_1:13145686-13145705 | None:intergenic | 50.0% | |
| CCGGTGGTGCAACTTATATG+AGG | + | chr4_1:13145686-13145705 | Msa0536270:intron | 50.0% | |
| ACTTATATGAGGCGGTGAGC+TGG | + | chr4_1:13145697-13145716 | Msa0536270:intron | 50.0% | |
| TCAGCCACTACACCACAAGA+CGG | + | chr4_1:13145772-13145791 | Msa0536270:intron | 50.0% | |
| AAACTTCCAGACCCGTCTTG+TGG | - | chr4_1:13145787-13145806 | None:intergenic | 50.0% | |
| !! | GGGTCTGGAAGTTTTGTCGA+CGG | + | chr4_1:13145793-13145812 | Msa0536270:intron | 50.0% |
| ! | AAATTTGGTGGCTTCGACGG+TGG | + | chr4_1:13145839-13145858 | Msa0536270:intron | 50.0% |
| GGTCAGGATCGTGATCTCTA+TGG | + | chr4_1:13145863-13145882 | Msa0536270:intron | 50.0% | |
| CTTGACCTTTGCCCATCTGT+AGG | + | chr4_1:13146004-13146023 | Msa0536270:intron | 50.0% | |
| ACAGTCCTACAGATGGGCAA+AGG | - | chr4_1:13146012-13146031 | None:intergenic | 50.0% | |
| ! | GGTTGGTACAGTCCTACAGA+TGG | - | chr4_1:13146019-13146038 | None:intergenic | 50.0% |
| TTGAGACTTTGGTGAGGCCA+TGG | + | chr4_1:13146753-13146772 | Msa0536270:intron | 50.0% | |
| GCACAGAAACTCCTCGGATT+AGG | - | chr4_1:13147002-13147021 | None:intergenic | 50.0% | |
| ! | TCTCGCGATCCCTTCACTTT+TGG | + | chr4_1:13147201-13147220 | Msa0536270:intron | 50.0% |
| GTTTACCAGGGTATGCAGCT+TGG | - | chr4_1:13147250-13147269 | None:intergenic | 50.0% | |
| !!! | AGTTCGGTTTTTTTGGGGGG+CGG | + | chr4_1:13148285-13148304 | Msa0536270:intron | 50.0% |
| ACATGAGGAGAGTTCGAGGA+AGG | - | chr4_1:13148564-13148583 | None:intergenic | 50.0% | |
| TTCGAAGACATGGCGCATAG+CGG | + | chr4_1:13148739-13148758 | Msa0536270:CDS | 50.0% | |
| ! | TTGGGTAGTCGCTTTACTCC+TGG | + | chr4_1:13148835-13148854 | Msa0536270:CDS | 50.0% |
| !!! | GTGGTGGTTTTGGTGGTGGT+GGG | - | chr4_1:13143131-13143150 | None:intergenic | 55.0% |
| !!! | TGTGGTGGTTTTGGTGGTGG+TGG | - | chr4_1:13143132-13143151 | None:intergenic | 55.0% |
| CTTGCCAAGGCCTTTGGCAA+TGG | + | chr4_1:13144581-13144600 | Msa0536270:intron | 55.0% | |
| !! | CACAAGGGTGCCATTGCCAA+AGG | - | chr4_1:13144594-13144613 | None:intergenic | 55.0% |
| TCCTATCCCGTCACACTACC+TGG | + | chr4_1:13145029-13145048 | Msa0536270:intron | 55.0% | |
| CCTATCCCGTCACACTACCT+GGG | + | chr4_1:13145030-13145049 | Msa0536270:intron | 55.0% | |
| CTATCCCGTCACACTACCTG+GGG | + | chr4_1:13145031-13145050 | Msa0536270:intron | 55.0% | |
| ATTGGCCCCAGGTAGTGTGA+CGG | - | chr4_1:13145039-13145058 | None:intergenic | 55.0% | |
| GCATCCCACACTACTCGATG+TGG | - | chr4_1:13145131-13145150 | None:intergenic | 55.0% | |
| ! | AGGGAGGGTTCCAAAGTGCT+TGG | + | chr4_1:13145200-13145219 | Msa0536270:intron | 55.0% |
| TTTCCAACCAGCCCCTCTGT+AGG | - | chr4_1:13145277-13145296 | None:intergenic | 55.0% | |
| !! | CGCCGAGTGAAGTATCGTAG+AGG | + | chr4_1:13145297-13145316 | Msa0536270:intron | 55.0% |
| GTATCGTAGAGGGCTGCTGT+CGG | + | chr4_1:13145308-13145327 | Msa0536270:intron | 55.0% | |
| TATCGTAGAGGGCTGCTGTC+GGG | + | chr4_1:13145309-13145328 | Msa0536270:intron | 55.0% | |
| !! | CTGTCGGGACATTGGCTCTA+AGG | + | chr4_1:13145324-13145343 | Msa0536270:intron | 55.0% |
| ! | CTAAGGGCAGGTGCTATGAC+AGG | + | chr4_1:13145341-13145360 | Msa0536270:intron | 55.0% |
| ! | CAGGTGCTATGACAGGGAGT+TGG | + | chr4_1:13145348-13145367 | Msa0536270:intron | 55.0% |
| ! | ACTTTTCTCCTCACCACCGG+TGG | + | chr4_1:13145670-13145689 | Msa0536270:intron | 55.0% |
| GTCTTGTGGTGTAGTGGCTG+AGG | - | chr4_1:13145773-13145792 | None:intergenic | 55.0% | |
| CAGCCACTACACCACAAGAC+GGG | + | chr4_1:13145773-13145792 | Msa0536270:intron | 55.0% | |
| AGACCCGTCTTGTGGTGTAG+TGG | - | chr4_1:13145779-13145798 | None:intergenic | 55.0% | |
| ACTACACCACAAGACGGGTC+TGG | + | chr4_1:13145778-13145797 | Msa0536270:intron | 55.0% | |
| TGTCGGACTCACGTCGATGT+CGG | - | chr4_1:13146969-13146988 | None:intergenic | 55.0% | |
| ! | GGTAGTCGCTTTACTCCTGG+TGG | + | chr4_1:13148838-13148857 | Msa0536270:CDS | 55.0% |
| ! | GTCGCTTTACTCCTGGTGGT+TGG | + | chr4_1:13148842-13148861 | Msa0536270:CDS | 55.0% |
| ! | ACTCCTGGTGGTTGGTGTGT+TGG | + | chr4_1:13148850-13148869 | Msa0536270:CDS | 55.0% |
| CTACCAACACACCAACCACC+AGG | - | chr4_1:13148856-13148875 | None:intergenic | 55.0% | |
| !! | GGTGCCATTGCCAAAGGCCT+TGG | - | chr4_1:13144588-13144607 | None:intergenic | 60.0% |
| ! | CCCAGGTAGTGTGACGGGAT+AGG | - | chr4_1:13145033-13145052 | None:intergenic | 60.0% |
| TTGGCCCCAGGTAGTGTGAC+GGG | - | chr4_1:13145038-13145057 | None:intergenic | 60.0% | |
| AGGACTACCTACAGAGGGGC+TGG | + | chr4_1:13145267-13145286 | Msa0536270:intron | 60.0% | |
| ! | CTACCTACAGAGGGGCTGGT+TGG | + | chr4_1:13145271-13145290 | Msa0536270:intron | 60.0% |
| !! | GGGACATTGGCTCTAAGGGC+AGG | + | chr4_1:13145329-13145348 | Msa0536270:intron | 60.0% |
| AAGTTGCACCACCGGTGGTG+AGG | - | chr4_1:13145681-13145700 | None:intergenic | 60.0% | |
| ! | TTTGGTGGCTTCGACGGTGG+TGG | + | chr4_1:13145842-13145861 | Msa0536270:intron | 60.0% |
| AGAACAAGCAGAGGCGGAGC+CGG | - | chr4_1:13146794-13146813 | None:intergenic | 60.0% | |
| CATCGACGTGAGTCCGACAC+CGG | + | chr4_1:13146970-13146989 | Msa0536270:intron | 60.0% | |
| ATCGACGTGAGTCCGACACC+GGG | + | chr4_1:13146971-13146990 | Msa0536270:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr4_1:13146986-13147005 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr4_1:13146992-13147011 | None:intergenic | 60.0% |
| CTCACCCAAGCTGCATACCC+TGG | + | chr4_1:13147242-13147261 | Msa0536270:intron | 60.0% | |
| GAGGGCTGCTGTCGGGACAT+TGG | + | chr4_1:13145316-13145335 | Msa0536270:intron | 65.0% | |
| ! | TGGCTTCGACGGTGGTGGTC+AGG | + | chr4_1:13145847-13145866 | Msa0536270:intron | 65.0% |
| ATGGCCATCCCATGTCCCCC+CGG | + | chr4_1:13146772-13146791 | Msa0536270:intron | 65.0% | |
| AACAAGCAGAGGCGGAGCCG+GGG | - | chr4_1:13146792-13146811 | None:intergenic | 65.0% | |
| GAACAAGCAGAGGCGGAGCC+GGG | - | chr4_1:13146793-13146812 | None:intergenic | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr4_1:13146988-13147007 | Msa0536270:intron | 65.0% | |
| GGGGGGACATGGGATGGCCA+TGG | - | chr4_1:13146773-13146792 | None:intergenic | 70.0% | |
| ACAAGCAGAGGCGGAGCCGG+GGG | - | chr4_1:13146791-13146810 | None:intergenic | 70.0% | |
| GGAGCCGGGGGGACATGGGA+TGG | - | chr4_1:13146779-13146798 | None:intergenic | 75.0% | |
| AGGCGGAGCCGGGGGGACAT+GGG | - | chr4_1:13146783-13146802 | None:intergenic | 75.0% | |
| CAAGCAGAGGCGGAGCCGGG+GGG | - | chr4_1:13146790-13146809 | None:intergenic | 75.0% | |
| ! | GAGGCGGAGCCGGGGGGACA+TGG | - | chr4_1:13146784-13146803 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 13142927 | 13149114 | 13142927 | ID=Msa0536270;Name=Msa0536270 |
| chr4_1 | mRNA | 13142927 | 13149114 | 13142927 | ID=Msa0536270-mRNA-1;Parent=Msa0536270;Name=Msa0536270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=182|1|1|1|1|1|4|100|418 |
| chr4_1 | exon | 13142927 | 13143658 | 13142927 | ID=Msa0536270-mRNA-1:exon:4167;Parent=Msa0536270-mRNA-1 |
| chr4_1 | exon | 13147594 | 13147669 | 13147594 | ID=Msa0536270-mRNA-1:exon:4168;Parent=Msa0536270-mRNA-1 |
| chr4_1 | exon | 13147778 | 13147893 | 13147778 | ID=Msa0536270-mRNA-1:exon:4169;Parent=Msa0536270-mRNA-1 |
| chr4_1 | exon | 13148500 | 13149114 | 13148500 | ID=Msa0536270-mRNA-1:exon:4170;Parent=Msa0536270-mRNA-1 |
| chr4_1 | five_prime_UTR | 13142927 | 13143108 | 13142927 | ID=Msa0536270-mRNA-1:five_prime_utr;Parent=Msa0536270-mRNA-1 |
| chr4_1 | CDS | 13143109 | 13143658 | 13143109 | ID=Msa0536270-mRNA-1:cds;Parent=Msa0536270-mRNA-1 |
| chr4_1 | CDS | 13147594 | 13147669 | 13147594 | ID=Msa0536270-mRNA-1:cds;Parent=Msa0536270-mRNA-1 |
| chr4_1 | CDS | 13147778 | 13147893 | 13147778 | ID=Msa0536270-mRNA-1:cds;Parent=Msa0536270-mRNA-1 |
| chr4_1 | CDS | 13148500 | 13149014 | 13148500 | ID=Msa0536270-mRNA-1:cds;Parent=Msa0536270-mRNA-1 |
| chr4_1 | three_prime_UTR | 13149015 | 13149114 | 13149015 | ID=Msa0536270-mRNA-1:three_prime_utr;Parent=Msa0536270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
