AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0540130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0540130 MtrunA17_Chr4g0017901 93.239 710 25 4 1 690 1 707 0.0 1362
Msa0540130 MtrunA17_Chr1g0188421 48.644 553 258 10 137 673 3 545 8.67e-174 508
Msa0540130 MtrunA17_Chr5g0434341 28.333 660 334 18 80 652 98 705 5.75e-79 266
Msa0540130 MtrunA17_Chr5g0417171 30.342 468 264 15 233 654 1 452 2.40e-52 187
Msa0540130 MtrunA17_Chr1g0188411 49.107 112 50 2 1 105 2 113 6.65e-30 114
Msa0540130 MtrunA17_Chr5g0417181 50.877 57 27 1 166 222 8 63 3.47e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0540130 AT1G33420.1 50.771 713 285 23 2 676 3 687 0.0 665
Msa0540130 AT1G33420.2 50.167 598 245 17 105 676 12 582 0.0 559
Msa0540130 AT5G22260.1 29.605 608 361 15 81 648 81 661 9.29e-81 270
Msa0540130 AT1G66170.1 28.169 639 340 18 75 648 69 653 1.04e-74 255
Msa0540130 AT2G01810.1 30.943 265 137 6 74 328 72 300 1.70e-31 131
Msa0540130 AT2G01810.1 27.597 308 178 10 364 648 397 682 3.10e-27 118
Msa0540130 AT2G07714.1 33.898 118 69 2 207 315 1 118 2.13e-18 84.3
Msa0540130 AT1G32810.2 41.270 63 34 1 600 662 22 81 4.99e-11 66.6

Find 288 sgRNAs with CRISPR-Local

Find 786 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTCACTTGAATTTAT+TGG 0.105268 4_1:-21723287 None:intergenic
CTTACAGTCAAGAAGCTTTC+TGG 0.134184 4_1:-21715983 None:intergenic
GGTAATTGGGGTTATGAATT+TGG 0.134330 4_1:+21715207 Msa0540130:CDS
GATCTGATATTATGGGTTTC+TGG 0.138269 4_1:+21714982 Msa0540130:CDS
TTATTGGATTTGTTTAAATT+TGG 0.149243 4_1:-21723271 None:intergenic
CGCAACTCCTTAAAATTATT+TGG 0.155540 4_1:+21722609 Msa0540130:three_prime_UTR
TTCAACAACCATTGAGAATA+TGG 0.160436 4_1:-21722453 None:intergenic
GAGAAGAATGCTTAGCTTAT+TGG 0.163834 4_1:+21723497 Msa0540130:three_prime_UTR
GGTCACTTGCTTACTCTTAA+TGG 0.175979 4_1:+21714930 Msa0540130:CDS
GTTACCTTGCTTCAGATAAT+TGG 0.198863 4_1:-21714703 None:intergenic
GGCATTCATGGTATGGTAAT+TGG 0.203027 4_1:+21715193 Msa0540130:CDS
ATGGATTTGTCCAAGAAATT+TGG 0.204374 4_1:+21715135 Msa0540130:CDS
TCATTTCTTCTTACTTTATC+AGG 0.213502 4_1:+21722265 Msa0540130:three_prime_UTR
TCTCTCCGGATCTGATATTA+TGG 0.225259 4_1:+21714974 Msa0540130:CDS
TCAACCCCTCTCTTTATTCT+AGG 0.242517 4_1:-21721494 None:intergenic
CCTGTAATTTATTATGTTCA+TGG 0.246154 4_1:+21715487 Msa0540130:CDS
ATTATTTGGCAGAAATCTTT+AGG 0.248637 4_1:+21722623 Msa0540130:three_prime_UTR
CCACAGTGGCATCAATAAAT+TGG 0.249246 4_1:+21722033 Msa0540130:three_prime_UTR
TATTGGATTGAATGAAATTC+AGG 0.249299 4_1:+21723514 Msa0540130:three_prime_UTR
CACCCATTTGGCCTCATTAC+AGG 0.263526 4_1:-21715571 None:intergenic
CTTCTGCCGCCGTGCCGTTC+CGG 0.264413 4_1:+21713661 Msa0540130:CDS
ATCAGAAATCACTTGCTCTT+TGG 0.265036 4_1:-21715872 None:intergenic
AATATAGACCAAAGATTAAT+AGG 0.265549 4_1:+21715941 Msa0540130:CDS
ATACAAAATCGGTTATTCTT+TGG 0.266874 4_1:+21723608 Msa0540130:three_prime_UTR
TAAGCTAATATTATAGATTT+CGG 0.277037 4_1:-21722779 None:intergenic
AAATACTCAAGCTCTGTTCT+TGG 0.279504 4_1:+21716860 Msa0540130:three_prime_UTR
GGTGATGGGTGGTCTTCTTT+AGG 0.279988 4_1:-21716096 None:intergenic
TTGAACCAATTCCAACAAAA+AGG 0.282288 4_1:-21715409 None:intergenic
TGATCTTGTTATGTTGAATT+TGG 0.289351 4_1:-21722654 None:intergenic
TTTAGCAGTCTCTGCACTCC+TGG 0.291770 4_1:-21715445 None:intergenic
GTGACAAGGCAAACTCTTAA+AGG 0.292184 4_1:+21715591 Msa0540130:CDS
GTAATTGGGGTTATGAATTT+GGG 0.295494 4_1:+21715208 Msa0540130:CDS
TTGATACATTTAACAGATCT+AGG 0.307630 4_1:-21723386 None:intergenic
TTTGTAGCCGTGAAACTTCT+AGG 0.308688 4_1:+21716219 Msa0540130:CDS
AGCGATATCACTTCATAATA+AGG 0.310055 4_1:+21714621 Msa0540130:CDS
GCATTCATGGTATGGTAATT+GGG 0.312049 4_1:+21715194 Msa0540130:CDS
TACTAGTTTATAGATATATT+AGG 0.312699 4_1:-21723229 None:intergenic
CTCTCCGGATCTGATATTAT+GGG 0.313811 4_1:+21714975 Msa0540130:CDS
ATAATCCAGTCCAAATTTCT+TGG 0.316954 4_1:-21715145 None:intergenic
GACTATTGCGATTGTGATCT+AGG 0.317183 4_1:-21722822 None:intergenic
CATCTACACATTCGGGATAT+TGG 0.322337 4_1:-21723068 None:intergenic
GTTAGACTGTTACAGGAATT+AGG 0.323072 4_1:+21721861 Msa0540130:three_prime_UTR
GGACCGAGCTCGGCTGCAGC+AGG 0.330168 4_1:-21723100 None:intergenic
CTGCTACAAAAGGGATATTA+TGG 0.334992 4_1:-21721573 None:intergenic
CACAGTGGTTAGACTGTTAC+AGG 0.335440 4_1:+21721854 Msa0540130:three_prime_UTR
CCATGAACATAATAAATTAC+AGG 0.344829 4_1:-21715487 None:intergenic
CCTGTCCTCATTATCGTTCC+AGG 0.345172 4_1:+21715296 Msa0540130:CDS
TGCCCTGCTGCAGCCGAGCT+CGG 0.346574 4_1:+21723097 Msa0540130:three_prime_UTR
GTATACCCTAAAATTCCTTC+TGG 0.348946 4_1:+21716266 Msa0540130:CDS
CATCTAGTGCTATTGAATTC+AGG 0.352626 4_1:+21715724 Msa0540130:CDS
TTTGTGCTGCTATGTCTGTT+AGG 0.352835 4_1:+21715012 Msa0540130:CDS
GTGATCTAGGGTTAGCAGTT+TGG 0.362512 4_1:-21722809 None:intergenic
CACAGAGATTATTAACTATA+GGG 0.364061 4_1:+21722179 Msa0540130:three_prime_UTR
GGTGACAGATAATTTGATCT+TGG 0.364764 4_1:-21716915 None:intergenic
GTCAACTTCGATATCATGTT+AGG 0.365328 4_1:+21722842 Msa0540130:three_prime_UTR
CGCCATCTTGTATGCATCTT+CGG 0.374613 4_1:-21715250 None:intergenic
AGTTTGCCTTGTCACCCATT+TGG 0.383313 4_1:-21715583 None:intergenic
ATATTATGGGTTTCTGGGAT+AGG 0.384205 4_1:+21714988 Msa0540130:CDS
GATTGCAAACTCAAGAACTA+TGG 0.384514 4_1:+21722914 Msa0540130:three_prime_UTR
ATCTGATATTATGGGTTTCT+GGG 0.386047 4_1:+21714983 Msa0540130:CDS
CTCATTCACTATTTCAATCA+AGG 0.390699 4_1:+21721451 Msa0540130:three_prime_UTR
CGTTCCGGAACGGTGTTTAC+CGG 0.393085 4_1:+21713676 Msa0540130:CDS
GCCGTGAAACTTCTAGGATA+TGG 0.393856 4_1:+21716225 Msa0540130:CDS
CAGACGTTCAGATTCTAGTT+AGG 0.397027 4_1:-21723027 None:intergenic
CGTGCCTCATACACCCTTCA+AGG 0.403284 4_1:+21721696 Msa0540130:three_prime_UTR
ATTGAGAATATGGGTTTACT+TGG 0.405492 4_1:-21722443 None:intergenic
ACTTGATTTGTTGCTTTAGC+AGG 0.406156 4_1:-21722570 None:intergenic
TGACAAGGCAAACTCTTAAA+GGG 0.406437 4_1:+21715592 Msa0540130:CDS
GGTTATGAGGTCCTCGATCC+TGG 0.408649 4_1:-21715314 None:intergenic
ACACAGAGATTATTAACTAT+AGG 0.410370 4_1:+21722178 Msa0540130:three_prime_UTR
GAATTAATCACGTGATAGAT+TGG 0.410423 4_1:-21722000 None:intergenic
CAATCACACATCTACACATT+CGG 0.411360 4_1:-21723076 None:intergenic
GTGACAGATAATTTGATCTT+GGG 0.412536 4_1:-21716914 None:intergenic
TACAGTGGCGCTGCTACAAA+AGG 0.416249 4_1:-21721583 None:intergenic
GCAATGGAGCTTAATCCATT+AGG 0.416846 4_1:-21715838 None:intergenic
CAATTGCCAGAGGGCATTCA+TGG 0.418503 4_1:+21715181 Msa0540130:CDS
AGACCGAAGTCAAGAAGCTC+TGG 0.418880 4_1:-21715639 None:intergenic
CTTCTGTTCCTCTCTCCATT+CGG 0.420523 4_1:-21716353 None:intergenic
ATGACTCAAATTCCAACTTC+AGG 0.422494 4_1:+21722076 Msa0540130:three_prime_UTR
ACTGTCAATTCCAGCACATC+TGG 0.423348 4_1:-21716463 None:intergenic
TCCACCACTGTCACGTGGCC+AGG 0.426266 4_1:-21721829 None:intergenic
CATGTGATACCTGTGGTGTC+TGG 0.429395 4_1:+21716433 Msa0540130:CDS
CGGCACGGCGGCAGAAGCGG+CGG 0.430200 4_1:-21713655 None:intergenic
TGTGATCAATGTCGTGTTGT+TGG 0.430361 4_1:+21713870 Msa0540130:CDS
TCAACAACCATTGAGAATAT+GGG 0.433150 4_1:-21722452 None:intergenic
TATACCCTAAAATTCCTTCT+GGG 0.437390 4_1:+21716267 Msa0540130:CDS
TAAATCTGATTACCTGAAGT+TGG 0.437870 4_1:-21722088 None:intergenic
CTCGGTCCTTGTTACTATCC+CGG 0.441802 4_1:-21721528 None:intergenic
GGGGCAGTGGGTAGGCGTAT+TGG 0.443315 4_1:+21715612 Msa0540130:CDS
CAGAAACATCTCCGGCGGTT+GGG 0.443612 4_1:-21713632 None:intergenic
AACTGTCTGGAATCAATCTC+TGG 0.444424 4_1:-21716729 None:intergenic
AGATTGGCTCATGTGCCTAA+TGG 0.445142 4_1:+21715823 Msa0540130:intron
AGAGACAAAGTTCAACTGTC+TGG 0.445662 4_1:-21716742 None:intergenic
GTTGTTGTAGAATACAAAAT+CGG 0.450390 4_1:+21723597 Msa0540130:three_prime_UTR
GCAAACTCTTAAAGGGGCAG+TGG 0.450934 4_1:+21715599 Msa0540130:CDS
ACCATATCCTAGAAGTTTCA+CGG 0.450976 4_1:-21716226 None:intergenic
ATTAACTCAGGCGGTGGTGA+TGG 0.451540 4_1:-21716111 None:intergenic
TTGAACTTCAACTGTACCAT+TGG 0.453345 4_1:-21716295 None:intergenic
TGCCTTCAGCTCTTAAGATC+TGG 0.455075 4_1:+21716049 Msa0540130:CDS
ATGTGTTTAATTTACAAGCC+TGG 0.455360 4_1:-21716551 None:intergenic
ACTAGGGTCTCGTGTTATGC+TGG 0.455799 4_1:+21716686 Msa0540130:three_prime_UTR
AATCTCTGGTACAGAATCCT+TGG 0.457091 4_1:-21716715 None:intergenic
CGTTGCGATCGAAGAAGCTT+GGG 0.461715 4_1:+21723541 Msa0540130:three_prime_UTR
ATTGTCTGCATAACCCTTGA+AGG 0.462694 4_1:-21721710 None:intergenic
CTTCGTGATATTAAAGTCCA+TGG 0.463483 4_1:-21721417 None:intergenic
CAAGGGAAATCAGTTGCAAA+TGG 0.466137 4_1:+21715672 Msa0540130:CDS
AAGTAAACCCATATTCTCAA+TGG 0.467487 4_1:+21722445 Msa0540130:three_prime_UTR
AAGATCTTGCCATGCTGAGA+TGG 0.467716 4_1:-21721634 None:intergenic
TCACTTGCTCTTTGGAAGGA+TGG 0.470398 4_1:-21715864 None:intergenic
AGTCCATGGATACTCTATAG+TGG 0.473150 4_1:-21721403 None:intergenic
TGACTGTAAGCAATTTATGA+AGG 0.473976 4_1:+21715996 Msa0540130:CDS
GTAATTCTGTAACCTAGCTC+TGG 0.476662 4_1:-21723121 None:intergenic
GTGGTGCAGTCAAGCTGGTA+TGG 0.477582 4_1:-21721781 None:intergenic
GTGCCTGTAATGAGGCCAAA+TGG 0.478860 4_1:+21715568 Msa0540130:CDS
CATGGTGTTGTACATGCTAA+TGG 0.479985 4_1:+21714903 Msa0540130:CDS
CGTGTTGGAGAAGTTGGTGA+TGG 0.480654 4_1:+21713774 Msa0540130:CDS
CATTTCTGCTGATGATCTTG+AGG 0.481146 4_1:+21714836 Msa0540130:CDS
CACCAGTGACTTCATTCAAA+AGG 0.481665 4_1:-21716164 None:intergenic
GTTTATTGCAGTCAATAGCT+TGG 0.483314 4_1:-21722157 None:intergenic
GTTGTACATGCTAATGGTTA+TGG 0.485683 4_1:+21714909 Msa0540130:CDS
TCCCCAGAGCTTCTTGACTT+CGG 0.486064 4_1:+21715636 Msa0540130:CDS
GATGGAGGTGATGTTTCGTC+TGG 0.488976 4_1:+21713792 Msa0540130:CDS
CTGCTGATGATCTTGAGGAA+TGG 0.489195 4_1:+21714841 Msa0540130:CDS
CAACAGTTTCGTCAACATCA+AGG 0.489564 4_1:-21723578 None:intergenic
TTAGCAGTCTCTGCACTCCT+GGG 0.490833 4_1:-21715444 None:intergenic
AGGTGATGTTTCGTCTGGTT+TGG 0.491601 4_1:+21713797 Msa0540130:CDS
ACCACTGAATGAAATTTGAA+TGG 0.491821 4_1:-21722133 None:intergenic
CTCTTAAAGGGGCAGTGGGT+AGG 0.492217 4_1:+21715604 Msa0540130:CDS
TGGCAGATCTTGTTTCGTGT+TGG 0.492289 4_1:+21713759 Msa0540130:CDS
TGGGGTTATGAATTTGGGAC+TGG 0.492477 4_1:+21715213 Msa0540130:CDS
GAACGGCACGGCGGCAGAAG+CGG 0.493751 4_1:-21713658 None:intergenic
ACATCTCTTACATACAAACT+TGG 0.497300 4_1:-21716502 None:intergenic
GAGAGGAACAGAAGAATGGA+AGG 0.497458 4_1:+21716362 Msa0540130:CDS
TAACCCTTGAAGGGTGTATG+AGG 0.498078 4_1:-21721700 None:intergenic
ATGGGTGGTCTTCTTTAGGA+TGG 0.498222 4_1:-21716092 None:intergenic
ACCATTCAAATTTCATTCAG+TGG 0.503786 4_1:+21722132 Msa0540130:three_prime_UTR
TAGGGTATACACACGATCTC+GGG 0.503961 4_1:-21716253 None:intergenic
CTAAGGATGATGATGGAGAA+AGG 0.503983 4_1:+21716403 Msa0540130:CDS
AGAGAAATAACAGACTGTAC+AGG 0.504612 4_1:-21715336 None:intergenic
GCAGAAACATCTCCGGCGGT+TGG 0.506827 4_1:-21713633 None:intergenic
TTTGTCCAAGAAATTTGGAC+TGG 0.508061 4_1:+21715140 Msa0540130:CDS
TTAGGGTATACACACGATCT+CGG 0.508674 4_1:-21716254 None:intergenic
AGATCTTGCCATGCTGAGAT+GGG 0.509313 4_1:-21721633 None:intergenic
ACCTAGCTCTGGACCGAGCT+CGG 0.509997 4_1:-21723110 None:intergenic
ATTGGATTGAATGAAATTCA+GGG 0.512769 4_1:+21723515 Msa0540130:three_prime_UTR
GAAACCCATAATATCAGATC+CGG 0.515739 4_1:-21714979 None:intergenic
TGTATATTTATGAGAGACTA+GGG 0.516429 4_1:+21716670 Msa0540130:three_prime_UTR
GGTGGCTCGTCGCTTCTCTC+CGG 0.517601 4_1:+21714960 Msa0540130:CDS
TGGCTGCATACCAGATGTGC+TGG 0.517639 4_1:+21716453 Msa0540130:CDS
ACTATTGCGATTGTGATCTA+GGG 0.518276 4_1:-21722821 None:intergenic
GAAACCGGTAAACACCGTTC+CGG 0.520178 4_1:-21713680 None:intergenic
AATGGTACAGTTGAAGTTCA+AGG 0.522348 4_1:+21716297 Msa0540130:CDS
TTGTTTCGTGTTGGAGAAGT+TGG 0.522586 4_1:+21713768 Msa0540130:CDS
TGGAAGGTTGACTGCATTTG+TGG 0.523381 4_1:+21716378 Msa0540130:CDS
GCCGCCGTGCCGTTCCGGAA+CGG 0.526524 4_1:+21713666 Msa0540130:CDS
GCACCACAGAGGGCGATTTG+AGG 0.529764 4_1:+21721797 Msa0540130:three_prime_UTR
GAGAAATAACAGACTGTACA+GGG 0.531821 4_1:-21715335 None:intergenic
TCACGTGATAGATTGGAAGT+TGG 0.532073 4_1:-21721993 None:intergenic
TGATACATTTAACAGATCTA+GGG 0.532301 4_1:-21723385 None:intergenic
GCGTTGCGATCGAAGAAGCT+TGG 0.532431 4_1:+21723540 Msa0540130:three_prime_UTR
GCCAGAGGGCATTCATGGTA+TGG 0.532503 4_1:+21715186 Msa0540130:CDS
TTACAGGAAGGTTACTGTGA+TGG 0.535841 4_1:+21715116 Msa0540130:intron
GCCGAGCTCGGTCCAGAGCT+AGG 0.535880 4_1:+21723109 Msa0540130:three_prime_UTR
CCTCTGTGGTGCAGTCAAGC+TGG 0.537268 4_1:-21721786 None:intergenic
TGTTATGCTGGATTTATCCA+AGG 0.537415 4_1:+21716698 Msa0540130:three_prime_UTR
TTAACTCAGGCGGTGGTGAT+GGG 0.538447 4_1:-21716110 None:intergenic
TTTGGAAGGATGGCTTGCAA+TGG 0.539310 4_1:-21715854 None:intergenic
GGCAGCACACGTAACAGAGT+TGG 0.541146 4_1:+21721756 Msa0540130:three_prime_UTR
TGGAGAGAGGAACAGAAGAA+TGG 0.542622 4_1:+21716358 Msa0540130:CDS
GAAATCACTTGCTCTTTGGA+AGG 0.542791 4_1:-21715868 None:intergenic
TCACATCGGAATCACACATT+CGG 0.543587 4_1:+21722945 Msa0540130:three_prime_UTR
AATCACACATCTACACATTC+GGG 0.547210 4_1:-21723075 None:intergenic
TGCCTGTAATGAGGCCAAAT+GGG 0.548171 4_1:+21715569 Msa0540130:CDS
ACATAATAAATTACAGGGAG+TGG 0.548311 4_1:-21715481 None:intergenic
TCTCTTCTCCCATCTCAGCA+TGG 0.548536 4_1:+21721625 Msa0540130:three_prime_UTR
CAAAGACCTTGCACTAAATG+TGG 0.549659 4_1:+21714671 Msa0540130:CDS
CTTACTCTTAATGGAAGAGA+AGG 0.551976 4_1:+21714939 Msa0540130:CDS
ATGTATATTTATGAGAGACT+AGG 0.552817 4_1:+21716669 Msa0540130:three_prime_UTR
TTCCTTCTGGGGTCAACCAA+TGG 0.553492 4_1:+21716279 Msa0540130:CDS
AATCCGTGTGGGAGATAACC+AGG 0.554516 4_1:+21716533 Msa0540130:CDS
TACCATTGGTTGACCCCAGA+AGG 0.556401 4_1:-21716281 None:intergenic
TGACTGCATTTGTGGTACTA+AGG 0.556557 4_1:+21716386 Msa0540130:CDS
AAGAGGATGTTACGAGGTCG+AGG 0.557183 4_1:+21713838 Msa0540130:CDS
CACATATTGCAGAGATGAAG+CGG 0.558172 4_1:+21716569 Msa0540130:CDS
CCTGGAACGATAATGAGGAC+AGG 0.559753 4_1:-21715296 None:intergenic
TTCGGTCTTAAGCACTTGCA+AGG 0.560600 4_1:+21715654 Msa0540130:CDS
GAAATCAGTTGCAAATGGAA+TGG 0.561635 4_1:+21715677 Msa0540130:CDS
TTTCTCTCATTCCCAACCGC+CGG 0.561689 4_1:+21713621 Msa0540130:CDS
CACCCACTATAGAGTATCCA+TGG 0.562141 4_1:+21721400 Msa0540130:three_prime_UTR
AGCGGCGGCAGAAACATCTC+CGG 0.563018 4_1:-21713640 None:intergenic
CACCAGATCTTAAGAGCTGA+AGG 0.563451 4_1:-21716051 None:intergenic
TTAACGATCCGATCTTAGAT+CGG 0.564407 4_1:-21722982 None:intergenic
ATCTGCCACGTCATCAGAGA+AGG 0.565487 4_1:-21713744 None:intergenic
GACCGAGCTCGGCTGCAGCA+GGG 0.565542 4_1:-21723099 None:intergenic
TGAGAGAAAATCGTAAAGAT+CGG 0.568309 4_1:-21713607 None:intergenic
GTTGGAGAAGTTGGTGATGG+AGG 0.568722 4_1:+21713777 Msa0540130:CDS
CATGAACATAATAAATTACA+GGG 0.569899 4_1:-21715486 None:intergenic
TACTCTTGACATTGTTGAAG+AGG 0.570128 4_1:+21713821 Msa0540130:CDS
CATTGATGAACACTAATCAC+AGG 0.570728 4_1:-21723197 None:intergenic
CTCTCCAATTATCTGAAGCA+AGG 0.571531 4_1:+21714699 Msa0540130:CDS
ACCATACCATGAATGCCCTC+TGG 0.571735 4_1:-21715187 None:intergenic
ACAGACTGTACAGGGTTATG+AGG 0.572142 4_1:-21715327 None:intergenic
TCCTACCTAGAATAAAGAGA+GGG 0.573325 4_1:+21721489 Msa0540130:three_prime_UTR
CAGGTAATCAGATTTAGACT+AGG 0.574534 4_1:+21722095 Msa0540130:three_prime_UTR
GGAGTTCCACATTTAGTGCA+AGG 0.575869 4_1:-21714677 None:intergenic
GTCCATGGATACTCTATAGT+GGG 0.577540 4_1:-21721402 None:intergenic
CATGGATACTCTATAGTGGG+TGG 0.581148 4_1:-21721399 None:intergenic
GAATTCAATAGCACTAGATG+TGG 0.582215 4_1:-21715721 None:intergenic
TCGATCCTGGAACGATAATG+AGG 0.584434 4_1:-21715301 None:intergenic
TGCTTCATGCAATTGCCAGA+GGG 0.584514 4_1:+21715172 Msa0540130:CDS
CAGCTTGACTGCACCACAGA+GGG 0.584661 4_1:+21721787 Msa0540130:three_prime_UTR
TAATGAGGACAGGGGCATGT+TGG 0.585572 4_1:-21715286 None:intergenic
AGCACAATTAACTCAGGCGG+TGG 0.587016 4_1:-21716117 None:intergenic
CTGGAACGATAATGAGGACA+GGG 0.587261 4_1:-21715295 None:intergenic
ACAGTGGCGCTGCTACAAAA+GGG 0.588316 4_1:-21721582 None:intergenic
GGGTTATGCAGACAATGTGA+TGG 0.589510 4_1:+21721717 Msa0540130:three_prime_UTR
GACCGAAGTCAAGAAGCTCT+GGG 0.590778 4_1:-21715638 None:intergenic
GATTATTAACTATAGGGCAT+CGG 0.593189 4_1:+21722185 Msa0540130:three_prime_UTR
ATGGATACTCTATAGTGGGT+GGG 0.593440 4_1:-21721398 None:intergenic
AGGTCTTTGATATGCTGCAT+TGG 0.594618 4_1:-21714657 None:intergenic
AGGGCAGTTATATGGCATCA+TGG 0.596673 4_1:-21716936 None:intergenic
ACTCAGGCGGTGGTGATGGG+TGG 0.596918 4_1:-21716107 None:intergenic
CTTGCTTCAGATAATTGGAG+AGG 0.597599 4_1:-21714698 None:intergenic
TTGCTTCATGCAATTGCCAG+AGG 0.599692 4_1:+21715171 Msa0540130:CDS
TGGCTTAGCACGATTCCGAA+TGG 0.602115 4_1:+21716338 Msa0540130:CDS
TCAACATTAGTAGCATTCAA+AGG 0.603217 4_1:-21716141 None:intergenic
CGGTAAACACCGTTCCGGAA+CGG 0.603326 4_1:-21713675 None:intergenic
ACTCTTAATGGAAGAGAAGG+TGG 0.606675 4_1:+21714942 Msa0540130:CDS
TGTGGTACTAAGGATGATGA+TGG 0.607260 4_1:+21716396 Msa0540130:CDS
CATTCATGGTATGGTAATTG+GGG 0.608012 4_1:+21715195 Msa0540130:CDS
CTCTTACATACAAACTTGGA+AGG 0.608157 4_1:-21716498 None:intergenic
AAAGCCTGGCCACGTGACAG+TGG 0.608300 4_1:+21721825 Msa0540130:three_prime_UTR
GGGTCTTTCGTTCATAACCA+TGG 0.609508 4_1:-21713556 None:intergenic
GCCTGGCCACGTGACAGTGG+TGG 0.610313 4_1:+21721828 Msa0540130:three_prime_UTR
TACCGAAGATGCATACAAGA+TGG 0.612813 4_1:+21715248 Msa0540130:CDS
CTGGAATTGACAGTGCTGAT+GGG 0.613480 4_1:+21716472 Msa0540130:CDS
GGTTATGCAGACAATGTGAT+GGG 0.613588 4_1:+21721718 Msa0540130:three_prime_UTR
CCCCTCTCTTTATTCTAGGT+AGG 0.613980 4_1:-21721490 None:intergenic
GAAGAAGCTTGGGATTTGAG+AGG 0.616979 4_1:+21723551 Msa0540130:three_prime_UTR
ATGAGGCCAAATGGGTGACA+AGG 0.617957 4_1:+21715577 Msa0540130:CDS
AAAGGCAGCACAATTAACTC+AGG 0.618250 4_1:-21716123 None:intergenic
CAAACTCTTAAAGGGGCAGT+GGG 0.620060 4_1:+21715600 Msa0540130:CDS
GCTGGAATTGACAGTGCTGA+TGG 0.620926 4_1:+21716471 Msa0540130:CDS
TGCATCAAGTGCCTGTAATG+AGG 0.624858 4_1:+21715560 Msa0540130:CDS
TCGGTCTTAAGCACTTGCAA+GGG 0.628349 4_1:+21715655 Msa0540130:CDS
AGTGACCGCCGATCTAAGAT+CGG 0.628781 4_1:+21722974 Msa0540130:three_prime_UTR
GCTCCTCAAATCGCCCTCTG+TGG 0.629143 4_1:-21721800 None:intergenic
TTGTCTGCATAACCCTTGAA+GGG 0.631202 4_1:-21721709 None:intergenic
TCATTATCGTTCCAGGATCG+AGG 0.631565 4_1:+21715303 Msa0540130:CDS
GTGCCTCATACACCCTTCAA+GGG 0.638339 4_1:+21721697 Msa0540130:three_prime_UTR
AACACCGTTCCGGAACGGCA+CGG 0.638834 4_1:-21713670 None:intergenic
AACAACACACATCTTCTGCA+TGG 0.642554 4_1:+21714885 Msa0540130:CDS
GCACGATTCCGAATGGAGAG+AGG 0.643389 4_1:+21716345 Msa0540130:CDS
GACGAGAAATGATGTCGAAG+AGG 0.646283 4_1:+21715509 Msa0540130:CDS
ATACCCTAAAATTCCTTCTG+GGG 0.646521 4_1:+21716268 Msa0540130:CDS
AATTCAATAGCACTAGATGT+GGG 0.647489 4_1:-21715720 None:intergenic
TGATATCGCTTTCGACACAC+AGG 0.648182 4_1:-21714608 None:intergenic
ATCCTACCTAGAATAAAGAG+AGG 0.648598 4_1:+21721488 Msa0540130:three_prime_UTR
GATAAGCCGGGATAGTAACA+AGG 0.649319 4_1:+21721522 Msa0540130:three_prime_UTR
CAAAATCGAGCAAATGACCT+CGG 0.649705 4_1:+21716023 Msa0540130:CDS
ACGATCCGATCTTAGATCGG+CGG 0.650382 4_1:-21722979 None:intergenic
GGCAGCACAATTAACTCAGG+CGG 0.652831 4_1:-21716120 None:intergenic
GTGGTTCCACCACTGTCACG+TGG 0.653777 4_1:-21721834 None:intergenic
GACAAGGCAAACTCTTAAAG+GGG 0.656461 4_1:+21715593 Msa0540130:CDS
GGTATGCAGCCAGACACCAC+AGG 0.658046 4_1:-21716442 None:intergenic
TGTGTTAACTCAATCCGTGT+GGG 0.658395 4_1:+21716522 Msa0540130:CDS
CCAATTTATTGATGCCACTG+TGG 0.663505 4_1:-21722033 None:intergenic
GGCGGCAGAAACATCTCCGG+CGG 0.667647 4_1:-21713637 None:intergenic
ATGTGTTAACTCAATCCGTG+TGG 0.672293 4_1:+21716521 Msa0540130:CDS
GATGGGCATGTAGATCTGCT+AGG 0.676494 4_1:+21721735 Msa0540130:three_prime_UTR
AAAGATTAATAGGAAAACAG+TGG 0.680975 4_1:+21715951 Msa0540130:CDS
CTATGGAAACTAATTCACAT+CGG 0.683546 4_1:+21722931 Msa0540130:three_prime_UTR
AAGCCTGGTTATCTCCCACA+CGG 0.684838 4_1:-21716536 None:intergenic
ATGGTTGTATCATCAACTTG+AGG 0.693179 4_1:+21714860 Msa0540130:CDS
AAGAGCTGAAGGCAGCTCCG+AGG 0.699457 4_1:-21716040 None:intergenic
ACCGAAGTCAAGAAGCTCTG+GGG 0.701812 4_1:-21715637 None:intergenic
CGAAGATGCATACAAGATGG+CGG 0.703099 4_1:+21715251 Msa0540130:CDS
CGGGATAGTAACAAGGACCG+AGG 0.703383 4_1:+21721529 Msa0540130:three_prime_UTR
TGGAACGATAATGAGGACAG+GGG 0.703505 4_1:-21715294 None:intergenic
CCTACCTAGAATAAAGAGAG+GGG 0.716820 4_1:+21721490 Msa0540130:three_prime_UTR
ACCGTTCCGGAACGGCACGG+CGG 0.727611 4_1:-21713667 None:intergenic
ATATTGCAGAGATGAAGCGG+TGG 0.735388 4_1:+21716572 Msa0540130:CDS
ATGTTAGCATGTGATACCTG+TGG 0.742288 4_1:+21716426 Msa0540130:CDS
CCAGCTTGACTGCACCACAG+AGG 0.744311 4_1:+21721786 Msa0540130:three_prime_UTR
ATTCACAATCTTAACCACAG+TGG 0.753267 4_1:+21722019 Msa0540130:three_prime_UTR
CTGTAACAGTCTAACCACTG+TGG 0.758424 4_1:-21721853 None:intergenic
TTGTTGAAGAGGATGTTACG+AGG 0.760276 4_1:+21713832 Msa0540130:CDS
TGACAGTGGTGGAACCACAG+TGG 0.765043 4_1:+21721839 Msa0540130:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTA+AGG - chr4_1:21717520-21717539 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr4_1:21717521-21717540 Msa0540130:intron 0.0%
!!! TTTTTCTATTTTTTTTTTTG+GGG + chr4_1:21713936-21713955 Msa0540130:intron 10.0%
!!! AATATAAAAAATGTGAATTT+TGG + chr4_1:21716621-21716640 Msa0540130:CDS 10.0%
!! ATTCTATTAGAAATTAAATT+AGG + chr4_1:21720921-21720940 Msa0540130:intron 10.0%
!!! ATTTTTTCTTTAAAATCAAA+GGG - chr4_1:21721197-21721216 None:intergenic 10.0%
!!! TATTTTTTCTTTAAAATCAA+AGG - chr4_1:21721198-21721217 None:intergenic 10.0%
!!! TATTATGGTAAAATATTTTT+TGG - chr4_1:21721561-21721580 None:intergenic 10.0%
!!! ATTAAGTTTTTGATATAATT+CGG - chr4_1:21722891-21722910 None:intergenic 10.0%
!! AAAAAAAAAAACTGTGATAT+AGG - chr4_1:21714037-21714056 None:intergenic 15.0%
!! TGTTGTTATAATTATGTTAT+AGG + chr4_1:21714086-21714105 Msa0540130:intron 15.0%
!! TAAATTTAGATTTAAAAAGC+TGG + chr4_1:21714265-21714284 Msa0540130:intron 15.0%
!!! TATATTTGATCATTTTTTCA+GGG - chr4_1:21715927-21715946 None:intergenic 15.0%
!!! TTTTTGAAGGAAAAAAAAAA+GGG - chr4_1:21716958-21716977 None:intergenic 15.0%
!!! TTTTTTGAAGGAAAAAAAAA+AGG - chr4_1:21716959-21716978 None:intergenic 15.0%
!! TTTATACAAAATAAAACAGA+TGG + chr4_1:21717073-21717092 Msa0540130:intron 15.0%
!! TTATACAAAATAAAACAGAT+GGG + chr4_1:21717074-21717093 Msa0540130:intron 15.0%
!!! TATATTTTTCTCAGAATTTT+TGG - chr4_1:21718289-21718308 None:intergenic 15.0%
!!! ATTCTGAGAAAAATATAATA+AGG + chr4_1:21718292-21718311 Msa0540130:intron 15.0%
!! AAATATAATAAGGATTATTG+TGG + chr4_1:21718302-21718321 Msa0540130:intron 15.0%
!! TTAATTCACATATATTGTAT+TGG - chr4_1:21720349-21720368 None:intergenic 15.0%
!! TTTACAATTTATTATTGTTG+TGG - chr4_1:21720874-21720893 None:intergenic 15.0%
!! TAAAAACAGATTTATTACAA+CGG + chr4_1:21720890-21720909 Msa0540130:intron 15.0%
!! GCTTATGAAATATTAAAAAT+TGG - chr4_1:21720978-21720997 None:intergenic 15.0%
!!! TTTTTTCTTTAAAATCAAAG+GGG - chr4_1:21721196-21721215 None:intergenic 15.0%
!! TAAGCTAATATTATAGATTT+CGG - chr4_1:21722782-21722801 None:intergenic 15.0%
!!! TACTAGTTTATAGATATATT+AGG - chr4_1:21723232-21723251 None:intergenic 15.0%
!!! TTATTGGATTTGTTTAAATT+TGG - chr4_1:21723274-21723293 None:intergenic 15.0%
!!! AGAATTTGAATTTTTGAATT+TGG - chr4_1:21723418-21723437 None:intergenic 15.0%
!!! TTTCAAATTTGCTGTAATTT+AGG + chr4_1:21714240-21714259 Msa0540130:intron 20.0%
!!! ATTGTGCTATAAATTTTTAC+AGG + chr4_1:21715100-21715119 Msa0540130:intron 20.0%
!! CATGAACATAATAAATTACA+GGG - chr4_1:21715489-21715508 None:intergenic 20.0%
!!! CTATATTTGATCATTTTTTC+AGG - chr4_1:21715928-21715947 None:intergenic 20.0%
!! AATATAGACCAAAGATTAAT+AGG + chr4_1:21715941-21715960 Msa0540130:CDS 20.0%
!!! TTTTTTATATTACAACGAAC+AGG - chr4_1:21716612-21716631 None:intergenic 20.0%
!! GAAAAAAAAATTTGTCATGA+TGG - chr4_1:21716810-21716829 None:intergenic 20.0%
!!! TCAGGTATTTTTTTTTTTGA+AGG - chr4_1:21716971-21716990 None:intergenic 20.0%
!! AATTAAGCAAAAAAAGAAAG+TGG + chr4_1:21717013-21717032 Msa0540130:intron 20.0%
!!! TGTTTTAATTAGTTATTCTG+TGG - chr4_1:21717206-21717225 None:intergenic 20.0%
!!! GCAGTGTTTTTTTTTTTTAT+CGG - chr4_1:21717589-21717608 None:intergenic 20.0%
!! TGGTTCAATTAATTAGTATA+AGG - chr4_1:21717961-21717980 None:intergenic 20.0%
!!! AAGTGCATATACTTTTATTT+GGG + chr4_1:21718827-21718846 Msa0540130:intron 20.0%
!! TGATACTATATTGAAAACTA+TGG - chr4_1:21719444-21719463 None:intergenic 20.0%
!! AATTGAGGAAATAATTTAGA+GGG + chr4_1:21720670-21720689 Msa0540130:intron 20.0%
!!! TGAACCTGATTTTTTTTTTT+GGG - chr4_1:21720817-21720836 None:intergenic 20.0%
!!! TTGAACCTGATTTTTTTTTT+TGG - chr4_1:21720818-21720837 None:intergenic 20.0%
!!! AATAATGTCTAAGTTGATAT+TGG - chr4_1:21720850-21720869 None:intergenic 20.0%
!! TATACCATACTTGTAAAAAA+AGG + chr4_1:21720945-21720964 Msa0540130:intron 20.0%
!!! TTCCAAAAATGATATTTTCA+GGG - chr4_1:21721901-21721920 None:intergenic 20.0%
!!! ATTCCAAAAATGATATTTTC+AGG - chr4_1:21721902-21721921 None:intergenic 20.0%
!!! AATAATATTTTCAGCTTCAT+TGG - chr4_1:21722317-21722336 None:intergenic 20.0%
!!! ATTTCTGCCAAATAATTTTA+AGG - chr4_1:21722619-21722638 None:intergenic 20.0%
!!! AGATTTGATTTTAGGTTTTT+GGG - chr4_1:21722701-21722720 None:intergenic 20.0%
!!! TAGATTTGATTTTAGGTTTT+TGG - chr4_1:21722702-21722721 None:intergenic 20.0%
!!! ATTGCAATAGATTTGATTTT+AGG - chr4_1:21722709-21722728 None:intergenic 20.0%
!!! ATAATCAATCAATGTTTTCT+TGG - chr4_1:21723146-21723165 None:intergenic 20.0%
!! ATCAATTCACTTGAATTTAT+TGG - chr4_1:21723290-21723309 None:intergenic 20.0%
!!! TTCTATTTTTTTTTTTGGGG+AGG + chr4_1:21713939-21713958 Msa0540130:intron 25.0%
!!! TTTTTTTTTTGAAACTGCGT+AGG + chr4_1:21714048-21714067 Msa0540130:intron 25.0%
! ATAGATTACACAAAAGCTAA+AGG + chr4_1:21714372-21714391 Msa0540130:intron 25.0%
!! TTAGTACTATGATAATGATG+TGG + chr4_1:21714480-21714499 Msa0540130:intron 25.0%
!! TAGTACTATGATAATGATGT+GGG + chr4_1:21714481-21714500 Msa0540130:intron 25.0%
!! TTGTTGATGGAAAAAAACAA+AGG + chr4_1:21714572-21714591 Msa0540130:intron 25.0%
!! TGCTATAAATTTTTACAGGA+AGG + chr4_1:21715104-21715123 Msa0540130:intron 25.0%
! CCATGAACATAATAAATTAC+AGG - chr4_1:21715490-21715509 None:intergenic 25.0%
! CCTGTAATTTATTATGTTCA+TGG + chr4_1:21715487-21715506 Msa0540130:CDS 25.0%
! GATTATATAAAACATCAGCT+GGG - chr4_1:21715797-21715816 None:intergenic 25.0%
! TTATATAATCCTTGACAGAT+TGG + chr4_1:21715807-21715826 Msa0540130:intron 25.0%
!! ACTGTTTTCCTATTAATCTT+TGG - chr4_1:21715952-21715971 None:intergenic 25.0%
! AAAGATTAATAGGAAAACAG+TGG + chr4_1:21715951-21715970 Msa0540130:CDS 25.0%
! ATGTATATTTATGAGAGACT+AGG + chr4_1:21716669-21716688 Msa0540130:three_prime_UTR 25.0%
! TGTATATTTATGAGAGACTA+GGG + chr4_1:21716670-21716689 Msa0540130:three_prime_UTR 25.0%
! GATTCAAAAAGCAATGATAT+TGG - chr4_1:21716834-21716853 None:intergenic 25.0%
! AAAAAAAAAGGGCAGTTATA+TGG - chr4_1:21716947-21716966 None:intergenic 25.0%
! ATACTAAAACTAAAACAGTC+AGG - chr4_1:21716989-21717008 None:intergenic 25.0%
! TTGTATAAATTTGTGTTCTC+TGG - chr4_1:21717062-21717081 None:intergenic 25.0%
! AAAACAGATGGGTAATTATT+TGG + chr4_1:21717085-21717104 Msa0540130:intron 25.0%
!! GACATGTAGATTTTAAACAT+GGG - chr4_1:21717284-21717303 None:intergenic 25.0%
!! TGACATGTAGATTTTAAACA+TGG - chr4_1:21717285-21717304 None:intergenic 25.0%
! ACAGGATAAAAAACAGATAT+AGG + chr4_1:21717313-21717332 Msa0540130:intron 25.0%
! CAGGATAAAAAACAGATATA+GGG + chr4_1:21717314-21717333 Msa0540130:intron 25.0%
! AGGATAAAAAACAGATATAG+GGG + chr4_1:21717315-21717334 Msa0540130:intron 25.0%
! TGATAAAAAAACAGAAGTTG+CGG + chr4_1:21717493-21717512 Msa0540130:intron 25.0%
! TTAAAAATTGAAAGCTGAAG+TGG + chr4_1:21718346-21718365 Msa0540130:intron 25.0%
! TAAAAATTGAAAGCTGAAGT+GGG + chr4_1:21718347-21718366 Msa0540130:intron 25.0%
! TCAAGTATGTTCAAACTAAT+CGG - chr4_1:21718552-21718571 None:intergenic 25.0%
!! GAAGTGCATATACTTTTATT+TGG + chr4_1:21718826-21718845 Msa0540130:intron 25.0%
!!! CATATACTTTTATTTGGGAA+AGG + chr4_1:21718832-21718851 Msa0540130:intron 25.0%
! ATTCCTTTCACAAATATACA+AGG - chr4_1:21719036-21719055 None:intergenic 25.0%
!! GTTTAATTTCTTACTCTACT+TGG - chr4_1:21719119-21719138 None:intergenic 25.0%
!!! AGTAAGTATGTTCTAAAACA+TGG - chr4_1:21719190-21719209 None:intergenic 25.0%
! AGTAAAACTACTCCTTTAAT+AGG - chr4_1:21719229-21719248 None:intergenic 25.0%
! TATTATGCAAGTTACAATCA+GGG - chr4_1:21719374-21719393 None:intergenic 25.0%
! ATATTATGCAAGTTACAATC+AGG - chr4_1:21719375-21719394 None:intergenic 25.0%
! AAGGATTAACAAGAAAATGA+TGG - chr4_1:21719618-21719637 None:intergenic 25.0%
!! TTTGAAATGATTAAAGCAGA+TGG - chr4_1:21719798-21719817 None:intergenic 25.0%
!! TGAAAAGTGATGAATGTTTT+GGG - chr4_1:21720187-21720206 None:intergenic 25.0%
!!! TCTTAAAATTGATTTGTCCA+TGG + chr4_1:21720287-21720306 Msa0540130:intron 25.0%
! AAAAGATATAGTTTCCCAAA+AGG - chr4_1:21720617-21720636 None:intergenic 25.0%
! GAATTGAGGAAATAATTTAG+AGG + chr4_1:21720669-21720688 Msa0540130:intron 25.0%
!! TGAATATCTATATCCTTTTG+AGG - chr4_1:21720783-21720802 None:intergenic 25.0%
!!! ATATTTTTTGGTAGAATCCT+CGG - chr4_1:21721549-21721568 None:intergenic 25.0%
! ACACAGAGATTATTAACTAT+AGG + chr4_1:21722178-21722197 Msa0540130:three_prime_UTR 25.0%
! CACAGAGATTATTAACTATA+GGG + chr4_1:21722179-21722198 Msa0540130:three_prime_UTR 25.0%
! TCATTTCTTCTTACTTTATC+AGG + chr4_1:21722265-21722284 Msa0540130:three_prime_UTR 25.0%
!! TTTACTTGGAAAAGCTTTTT+AGG - chr4_1:21722432-21722451 None:intergenic 25.0%
! ATTATTTGGCAGAAATCTTT+AGG + chr4_1:21722623-21722642 Msa0540130:three_prime_UTR 25.0%
!! TGATCTTGTTATGTTGAATT+TGG - chr4_1:21722657-21722676 None:intergenic 25.0%
! TGATACATTTAACAGATCTA+GGG - chr4_1:21723388-21723407 None:intergenic 25.0%
! TTGATACATTTAACAGATCT+AGG - chr4_1:21723389-21723408 None:intergenic 25.0%
! TATTGGATTGAATGAAATTC+AGG + chr4_1:21723514-21723533 Msa0540130:three_prime_UTR 25.0%
! ATTGGATTGAATGAAATTCA+GGG + chr4_1:21723515-21723534 Msa0540130:three_prime_UTR 25.0%
! GTTGTTGTAGAATACAAAAT+CGG + chr4_1:21723597-21723616 Msa0540130:three_prime_UTR 25.0%
! ATACAAAATCGGTTATTCTT+TGG + chr4_1:21723608-21723627 Msa0540130:three_prime_UTR 25.0%
TGAGAGAAAATCGTAAAGAT+CGG - chr4_1:21713610-21713629 None:intergenic 30.0%
!!! ATTATTTTGATGTACACACC+TGG + chr4_1:21713986-21714005 Msa0540130:intron 30.0%
! ATACTTTGACTGTTTGTTGA+TGG + chr4_1:21714559-21714578 Msa0540130:intron 30.0%
TGATGGAAAAAAACAAAGGA+TGG + chr4_1:21714576-21714595 Msa0540130:intron 30.0%
AGCGATATCACTTCATAATA+AGG + chr4_1:21714621-21714640 Msa0540130:CDS 30.0%
AGTTTGAAGGATTGAAATTG+TGG + chr4_1:21714776-21714795 Msa0540130:intron 30.0%
ATCTGATATTATGGGTTTCT+GGG + chr4_1:21714983-21715002 Msa0540130:CDS 30.0%
! TTACATTTTGCTTCAGAGTT+TGG + chr4_1:21715061-21715080 Msa0540130:intron 30.0%
ATGGATTTGTCCAAGAAATT+TGG + chr4_1:21715135-21715154 Msa0540130:CDS 30.0%
ATAATCCAGTCCAAATTTCT+TGG - chr4_1:21715148-21715167 None:intergenic 30.0%
GTAATTGGGGTTATGAATTT+GGG + chr4_1:21715208-21715227 Msa0540130:CDS 30.0%
TATTTCTCTTTACCAGTCAT+TGG + chr4_1:21715350-21715369 Msa0540130:intron 30.0%
TTGAACCAATTCCAACAAAA+AGG - chr4_1:21715412-21715431 None:intergenic 30.0%
ACATAATAAATTACAGGGAG+TGG - chr4_1:21715484-21715503 None:intergenic 30.0%
AATTCAATAGCACTAGATGT+GGG - chr4_1:21715723-21715742 None:intergenic 30.0%
TTGAATTCAGGTAAGAGTAA+TGG + chr4_1:21715736-21715755 Msa0540130:intron 30.0%
GAAGCAACTATTCACAAAAA+AGG - chr4_1:21715766-21715785 None:intergenic 30.0%
GGATTATATAAAACATCAGC+TGG - chr4_1:21715798-21715817 None:intergenic 30.0%
TGACTGTAAGCAATTTATGA+AGG + chr4_1:21715996-21716015 Msa0540130:CDS 30.0%
TCAACATTAGTAGCATTCAA+AGG - chr4_1:21716144-21716163 None:intergenic 30.0%
TATACCCTAAAATTCCTTCT+GGG + chr4_1:21716267-21716286 Msa0540130:CDS 30.0%
ACATCTCTTACATACAAACT+TGG - chr4_1:21716505-21716524 None:intergenic 30.0%
! ATGTGTTTAATTTACAAGCC+TGG - chr4_1:21716554-21716573 None:intergenic 30.0%
GTGACAGATAATTTGATCTT+GGG - chr4_1:21716917-21716936 None:intergenic 30.0%
! AAACAGATTTTAAACCAACC+AGG + chr4_1:21717123-21717142 Msa0540130:intron 30.0%
TTATGCATACTTAACATGAC+TGG - chr4_1:21717235-21717254 None:intergenic 30.0%
CTACATGTCAGATAAAAAAC+AGG + chr4_1:21717295-21717314 Msa0540130:intron 30.0%
ATAAAAAACAGATATAGGGG+TGG + chr4_1:21717318-21717337 Msa0540130:intron 30.0%
TAAAAAACAGATATAGGGGT+GGG + chr4_1:21717319-21717338 Msa0540130:intron 30.0%
!!! GTTTCTGGTTTTCTGTTTTT+AGG - chr4_1:21717377-21717396 None:intergenic 30.0%
! CATCTTTATACATGGTTTTC+TGG - chr4_1:21717413-21717432 None:intergenic 30.0%
CAGAAAACCATGTATAAAGA+TGG + chr4_1:21717411-21717430 Msa0540130:intron 30.0%
CCTAAATGGTTTCATGAATT+TGG - chr4_1:21717462-21717481 None:intergenic 30.0%
CCAAATTCATGAAACCATTT+AGG + chr4_1:21717459-21717478 Msa0540130:intron 30.0%
ATGAAACCATTTAGGAAGAT+AGG + chr4_1:21717467-21717486 Msa0540130:intron 30.0%
! CATACATGGTTTCATGATTT+TGG - chr4_1:21717556-21717575 None:intergenic 30.0%
!!! ACGCTTTTTTCGATTTTAAG+AGG - chr4_1:21717615-21717634 None:intergenic 30.0%
TTTGATTAAGGGTTGTCTAA+TGG - chr4_1:21717753-21717772 None:intergenic 30.0%
CAACAATATTCCAGTACATT+TGG - chr4_1:21717825-21717844 None:intergenic 30.0%
CAAATGTACTGGAATATTGT+TGG + chr4_1:21717823-21717842 Msa0540130:intron 30.0%
! AATCATCACCAAACTTTTAG+TGG + chr4_1:21717914-21717933 Msa0540130:intron 30.0%
AAAGGTTACCACTAAAAGTT+TGG - chr4_1:21717925-21717944 None:intergenic 30.0%
TGAACCATTATAATCCTCTT+TGG + chr4_1:21717974-21717993 Msa0540130:intron 30.0%
GACACATTATAACTGTTGTA+TGG + chr4_1:21718238-21718257 Msa0540130:intron 30.0%
GACTAAGTTTAACAACATTG+TGG + chr4_1:21718453-21718472 Msa0540130:intron 30.0%
ACTCAATTTCTAAACTAGTG+TGG - chr4_1:21718515-21718534 None:intergenic 30.0%
TAGTTTAGAAATTGAGTGAC+TGG + chr4_1:21718518-21718537 Msa0540130:intron 30.0%
AAGTATGTTCAAACTAATCG+GGG - chr4_1:21718550-21718569 None:intergenic 30.0%
CAAGTATGTTCAAACTAATC+GGG - chr4_1:21718551-21718570 None:intergenic 30.0%
!! AGAAAACTGATTTTCAACCA+TGG + chr4_1:21718579-21718598 Msa0540130:intron 30.0%
ATTAATATACAGGGACTTGT+GGG - chr4_1:21718737-21718756 None:intergenic 30.0%
AATTAATATACAGGGACTTG+TGG - chr4_1:21718738-21718757 None:intergenic 30.0%
TCCCTGTATATTAATTACAG+AGG + chr4_1:21718742-21718761 Msa0540130:intron 30.0%
CCCTCTGTAATTAATATACA+GGG - chr4_1:21718746-21718765 None:intergenic 30.0%
CCCTGTATATTAATTACAGA+GGG + chr4_1:21718743-21718762 Msa0540130:intron 30.0%
CCTGTATATTAATTACAGAG+GGG + chr4_1:21718744-21718763 Msa0540130:intron 30.0%
CTTGTGTAAAAAACAGGATA+AGG - chr4_1:21718940-21718959 None:intergenic 30.0%
!!! TATCCTGTTTTTTACACAAG+AGG + chr4_1:21718940-21718959 Msa0540130:intron 30.0%
TCACCTTGTATATTTGTGAA+AGG + chr4_1:21719030-21719049 Msa0540130:intron 30.0%
TTGTAAATCAGAACTTGGAT+GGG + chr4_1:21719080-21719099 Msa0540130:intron 30.0%
!! TATGTTCTAAAACATGGTCA+GGG - chr4_1:21719184-21719203 None:intergenic 30.0%
CAAAGATACATGCCTATTAA+AGG + chr4_1:21719214-21719233 Msa0540130:intron 30.0%
ATTATGCAAGTTACAATCAG+GGG - chr4_1:21719373-21719392 None:intergenic 30.0%
! GTCTTCAATTTCTGAGAAAT+TGG + chr4_1:21719547-21719566 Msa0540130:intron 30.0%
AGATCTTCCGAAATTTATTG+AGG + chr4_1:21719680-21719699 Msa0540130:intron 30.0%
GATCTTCCGAAATTTATTGA+GGG + chr4_1:21719681-21719700 Msa0540130:intron 30.0%
! TGTGAAGTTTTCTGCAAATA+TGG + chr4_1:21719761-21719780 Msa0540130:intron 30.0%
! GAGGAAAAGAATTTTGTTGA+TGG - chr4_1:21720033-21720052 None:intergenic 30.0%
! GTGAAAAGTGATGAATGTTT+TGG - chr4_1:21720188-21720207 None:intergenic 30.0%
GGAAAAGATCAGATCATATT+TGG + chr4_1:21720216-21720235 Msa0540130:intron 30.0%
! TGGTCAAAGTTTGTTTATAC+CGG + chr4_1:21720242-21720261 Msa0540130:intron 30.0%
!! AATTGATTTGTCCATGGAAA+AGG + chr4_1:21720293-21720312 Msa0540130:intron 30.0%
CTAGAAATTAACAGACCAAA+AGG + chr4_1:21720425-21720444 Msa0540130:intron 30.0%
! ATTCTTTTCAGAAAGCCTTT+TGG - chr4_1:21720443-21720462 None:intergenic 30.0%
ATATAGTTTCCCAAAAGGTA+GGG - chr4_1:21720612-21720631 None:intergenic 30.0%
GGAACTGAAAAAATGAATTG+AGG + chr4_1:21720655-21720674 Msa0540130:intron 30.0%
TTAATGAGTGTTATACGAAG+CGG - chr4_1:21720730-21720749 None:intergenic 30.0%
!!! TGATTTTTTTTTTTGGGTGG+GGG - chr4_1:21720811-21720830 None:intergenic 30.0%
!!! CTGATTTTTTTTTTTGGGTG+GGG - chr4_1:21720812-21720831 None:intergenic 30.0%
!!! CCTGATTTTTTTTTTTGGGT+GGG - chr4_1:21720813-21720832 None:intergenic 30.0%
!!! ACCTGATTTTTTTTTTTGGG+TGG - chr4_1:21720814-21720833 None:intergenic 30.0%
!!! CTAGCCTTTTTTTACAAGTA+TGG - chr4_1:21720952-21720971 None:intergenic 30.0%
TTCATAAGCCACATAATATC+TGG + chr4_1:21720989-21721008 Msa0540130:intron 30.0%
AAGTTGAACCAGATATTATG+TGG - chr4_1:21721000-21721019 None:intergenic 30.0%
! ACATAATATCTGGTTCAACT+TGG + chr4_1:21720999-21721018 Msa0540130:intron 30.0%
! CATAATATCTGGTTCAACTT+GGG + chr4_1:21721000-21721019 Msa0540130:intron 30.0%
CAGAGCCAATGAAATAAAAT+GGG + chr4_1:21721236-21721255 Msa0540130:intron 30.0%
!! CCAATCCCATTTTATTTCAT+TGG - chr4_1:21721244-21721263 None:intergenic 30.0%
CCAATGAAATAAAATGGGAT+TGG + chr4_1:21721241-21721260 Msa0540130:intron 30.0%
GAAATAAAATGGGATTGGAA+AGG + chr4_1:21721246-21721265 Msa0540130:intron 30.0%
GCTATTCTTTATATGTTGAG+TGG - chr4_1:21721320-21721339 None:intergenic 30.0%
CTCATTCACTATTTCAATCA+AGG + chr4_1:21721451-21721470 Msa0540130:three_prime_UTR 30.0%
GTCGAAAAAATTAAGTACAG+TGG - chr4_1:21721601-21721620 None:intergenic 30.0%
!! AAAATGATATTTTCAGGGTC+AGG - chr4_1:21721896-21721915 None:intergenic 30.0%
! GACCCTGAAAATATCATTTT+TGG + chr4_1:21721896-21721915 Msa0540130:three_prime_UTR 30.0%
GAATTAATCACGTGATAGAT+TGG - chr4_1:21722003-21722022 None:intergenic 30.0%
TAAATCTGATTACCTGAAGT+TGG - chr4_1:21722091-21722110 None:intergenic 30.0%
ACCATTCAAATTTCATTCAG+TGG + chr4_1:21722132-21722151 Msa0540130:three_prime_UTR 30.0%
ACCACTGAATGAAATTTGAA+TGG - chr4_1:21722136-21722155 None:intergenic 30.0%
GATTATTAACTATAGGGCAT+CGG + chr4_1:21722185-21722204 Msa0540130:three_prime_UTR 30.0%
ATTGAGAATATGGGTTTACT+TGG - chr4_1:21722446-21722465 None:intergenic 30.0%
AAGTAAACCCATATTCTCAA+TGG + chr4_1:21722445-21722464 Msa0540130:three_prime_UTR 30.0%
TCAACAACCATTGAGAATAT+GGG - chr4_1:21722455-21722474 None:intergenic 30.0%
TTCAACAACCATTGAGAATA+TGG - chr4_1:21722456-21722475 None:intergenic 30.0%
CGCAACTCCTTAAAATTATT+TGG + chr4_1:21722609-21722628 Msa0540130:three_prime_UTR 30.0%
! TCGATATCATGTTAGGTTTT+AGG + chr4_1:21722849-21722868 Msa0540130:three_prime_UTR 30.0%
! CGATATCATGTTAGGTTTTA+GGG + chr4_1:21722850-21722869 Msa0540130:three_prime_UTR 30.0%
CTATGGAAACTAATTCACAT+CGG + chr4_1:21722931-21722950 Msa0540130:three_prime_UTR 30.0%
TACTCTTGACATTGTTGAAG+AGG + chr4_1:21713821-21713840 Msa0540130:CDS 35.0%
AATATACATACAGTAGAGCC+AGG - chr4_1:21714007-21714026 None:intergenic 35.0%
CAAAGTTAACCACTATGGTT+TGG - chr4_1:21714327-21714346 None:intergenic 35.0%
CAAACCATAGTGGTTAACTT+TGG + chr4_1:21714325-21714344 Msa0540130:intron 35.0%
AACTCCAAAGTTAACCACTA+TGG - chr4_1:21714332-21714351 None:intergenic 35.0%
GTTACCTTGCTTCAGATAAT+TGG - chr4_1:21714706-21714725 None:intergenic 35.0%
! CTTCACACTGTTGTTTGATT+GGG + chr4_1:21714747-21714766 Msa0540130:intron 35.0%
GATTGGGATAAGTAGTTTGA+AGG + chr4_1:21714763-21714782 Msa0540130:intron 35.0%
! TTGTGGTTTGATATTTCTGC+AGG + chr4_1:21714793-21714812 Msa0540130:intron 35.0%
ATGGTTGTATCATCAACTTG+AGG + chr4_1:21714860-21714879 Msa0540130:CDS 35.0%
GTTGTACATGCTAATGGTTA+TGG + chr4_1:21714909-21714928 Msa0540130:CDS 35.0%
CTTACTCTTAATGGAAGAGA+AGG + chr4_1:21714939-21714958 Msa0540130:CDS 35.0%
GAAACCCATAATATCAGATC+CGG - chr4_1:21714982-21715001 None:intergenic 35.0%
GATCTGATATTATGGGTTTC+TGG + chr4_1:21714982-21715001 Msa0540130:CDS 35.0%
!! ATATTATGGGTTTCTGGGAT+AGG + chr4_1:21714988-21715007 Msa0540130:CDS 35.0%
TTTGTCCAAGAAATTTGGAC+TGG + chr4_1:21715140-21715159 Msa0540130:CDS 35.0%
GCATTCATGGTATGGTAATT+GGG + chr4_1:21715194-21715213 Msa0540130:CDS 35.0%
CATTCATGGTATGGTAATTG+GGG + chr4_1:21715195-21715214 Msa0540130:CDS 35.0%
GGTAATTGGGGTTATGAATT+TGG + chr4_1:21715207-21715226 Msa0540130:CDS 35.0%
GAGAAATAACAGACTGTACA+GGG - chr4_1:21715338-21715357 None:intergenic 35.0%
AGAGAAATAACAGACTGTAC+AGG - chr4_1:21715339-21715358 None:intergenic 35.0%
! AGATCTCTTCTCCTTTTTGT+TGG + chr4_1:21715398-21715417 Msa0540130:CDS 35.0%
! CTTCTCCTTTTTGTTGGAAT+TGG + chr4_1:21715404-21715423 Msa0540130:CDS 35.0%
! TTCAAAATTTTCGTAAGCCC+AGG + chr4_1:21715427-21715446 Msa0540130:CDS 35.0%
TGACAAGGCAAACTCTTAAA+GGG + chr4_1:21715592-21715611 Msa0540130:CDS 35.0%
GAAATCAGTTGCAAATGGAA+TGG + chr4_1:21715677-21715696 Msa0540130:CDS 35.0%
GAATTCAATAGCACTAGATG+TGG - chr4_1:21715724-21715743 None:intergenic 35.0%
! CATCTAGTGCTATTGAATTC+AGG + chr4_1:21715724-21715743 Msa0540130:CDS 35.0%
ATCAGAAATCACTTGCTCTT+TGG - chr4_1:21715875-21715894 None:intergenic 35.0%
ACCATATCCTAGAAGTTTCA+CGG - chr4_1:21716229-21716248 None:intergenic 35.0%
GTATACCCTAAAATTCCTTC+TGG + chr4_1:21716266-21716285 Msa0540130:CDS 35.0%
ATACCCTAAAATTCCTTCTG+GGG + chr4_1:21716268-21716287 Msa0540130:CDS 35.0%
TTGAACTTCAACTGTACCAT+TGG - chr4_1:21716298-21716317 None:intergenic 35.0%
AATGGTACAGTTGAAGTTCA+AGG + chr4_1:21716297-21716316 Msa0540130:CDS 35.0%
CTCTTACATACAAACTTGGA+AGG - chr4_1:21716501-21716520 None:intergenic 35.0%
TGTTATGCTGGATTTATCCA+AGG + chr4_1:21716698-21716717 Msa0540130:three_prime_UTR 35.0%
AAATACTCAAGCTCTGTTCT+TGG + chr4_1:21716860-21716879 Msa0540130:three_prime_UTR 35.0%
GGTGACAGATAATTTGATCT+TGG - chr4_1:21716918-21716937 None:intergenic 35.0%
CAGATGGGTAATTATTTGGT+AGG + chr4_1:21717089-21717108 Msa0540130:intron 35.0%
AACCATGTATAAAGATGGTC+TGG + chr4_1:21717416-21717435 Msa0540130:intron 35.0%
TACCAGACCATCTTTATACA+TGG - chr4_1:21717421-21717440 None:intergenic 35.0%
TCAGAACCTATCTTCCTAAA+TGG - chr4_1:21717476-21717495 None:intergenic 35.0%
CAGAAATGATGAAACCATGT+AGG + chr4_1:21717637-21717656 Msa0540130:intron 35.0%
AAATGATGAAACCATGTAGG+AGG + chr4_1:21717640-21717659 Msa0540130:intron 35.0%
AATGATGAAACCATGTAGGA+GGG + chr4_1:21717641-21717660 Msa0540130:intron 35.0%
TAACTCTGATGAGAAAGAAG+TGG - chr4_1:21717687-21717706 None:intergenic 35.0%
GAGAGGATGCATTTGATTAA+GGG - chr4_1:21717764-21717783 None:intergenic 35.0%
TGAGAGGATGCATTTGATTA+AGG - chr4_1:21717765-21717784 None:intergenic 35.0%
CAATATTCCAGTACATTTGG+AGG - chr4_1:21717822-21717841 None:intergenic 35.0%
TCCTTAGTTGTTCTCAACAT+GGG + chr4_1:21717865-21717884 Msa0540130:intron 35.0%
CACACCAAAGAGGATTATAA+TGG - chr4_1:21717981-21718000 None:intergenic 35.0%
CATTATAATCCTCTTTGGTG+TGG + chr4_1:21717979-21717998 Msa0540130:intron 35.0%
AATACCCATTTGCAGCAAAT+AGG + chr4_1:21718002-21718021 Msa0540130:intron 35.0%
!! AAAAGCACTCATAGGCTTTA+TGG + chr4_1:21718132-21718151 Msa0540130:intron 35.0%
! AAAGCACTCATAGGCTTTAT+GGG + chr4_1:21718133-21718152 Msa0540130:intron 35.0%
TATGGGAGGTGAAATAATCA+AGG + chr4_1:21718150-21718169 Msa0540130:intron 35.0%
TAAGTTGCAATTCAGGTCAT+AGG - chr4_1:21718186-21718205 None:intergenic 35.0%
ACAGTCATAAGTTGCAATTC+AGG - chr4_1:21718193-21718212 None:intergenic 35.0%
TGCAACTTATGACTGTTGTA+CGG + chr4_1:21718197-21718216 Msa0540130:intron 35.0%
TTATAACTGTTGTATGGCCT+TGG + chr4_1:21718244-21718263 Msa0540130:intron 35.0%
GAGAAATGCATAATCCCAAT+AGG + chr4_1:21718397-21718416 Msa0540130:intron 35.0%
AGTATGTTCAAACTAATCGG+GGG - chr4_1:21718549-21718568 None:intergenic 35.0%
CTATCAGCAATTCAAAACCA+TGG - chr4_1:21718599-21718618 None:intergenic 35.0%
ATGCATTCGCTAGATTTAGT+TGG - chr4_1:21718660-21718679 None:intergenic 35.0%
GTACTATATAAACCCAGTAG+TGG + chr4_1:21718693-21718712 Msa0540130:intron 35.0%
TTAATATACAGGGACTTGTG+GGG - chr4_1:21718736-21718755 None:intergenic 35.0%
CCCCTCTGTAATTAATATAC+AGG - chr4_1:21718747-21718766 None:intergenic 35.0%
GTACAATACACCAAAATGGT+GGG - chr4_1:21718913-21718932 None:intergenic 35.0%
ATGCGTTGTAAATCAGAACT+TGG + chr4_1:21719075-21719094 Msa0540130:intron 35.0%
GTTGTAAATCAGAACTTGGA+TGG + chr4_1:21719079-21719098 Msa0540130:intron 35.0%
AAACTACTTGAAATCCAGTC+AGG + chr4_1:21719135-21719154 Msa0540130:intron 35.0%
AACTACTTGAAATCCAGTCA+GGG + chr4_1:21719136-21719155 Msa0540130:intron 35.0%
GATCATCTAGAAAGAAGAGA+GGG - chr4_1:21719162-21719181 None:intergenic 35.0%
!! GTATGTTCTAAAACATGGTC+AGG - chr4_1:21719185-21719204 None:intergenic 35.0%
!! GTAGTTTTACTCAAGCTTGT+AGG + chr4_1:21719238-21719257 Msa0540130:intron 35.0%
TTGGTTGCAGTTAGTTACAA+GGG - chr4_1:21719297-21719316 None:intergenic 35.0%
TTTGGTTGCAGTTAGTTACA+AGG - chr4_1:21719298-21719317 None:intergenic 35.0%
TGACGGAAAAATTTGCATTG+GGG - chr4_1:21719489-21719508 None:intergenic 35.0%
! GTGACGGAAAAATTTGCATT+GGG - chr4_1:21719490-21719509 None:intergenic 35.0%
! TGTGACGGAAAAATTTGCAT+TGG - chr4_1:21719491-21719510 None:intergenic 35.0%
! CAAATTTTTCCGTCACATAC+CGG + chr4_1:21719494-21719513 Msa0540130:intron 35.0%
CTCAGAAATTGAAGACCAAA+GGG - chr4_1:21719543-21719562 None:intergenic 35.0%
TCTCAGAAATTGAAGACCAA+AGG - chr4_1:21719544-21719563 None:intergenic 35.0%
! AATTGGACTCTGAAAACTAC+AGG + chr4_1:21719564-21719583 Msa0540130:intron 35.0%
! AGCTTATGAGCTTTAATCAC+AGG - chr4_1:21719595-21719614 None:intergenic 35.0%
GATGCATTTCACAGTATCTA+AGG - chr4_1:21719637-21719656 None:intergenic 35.0%
AAATTTCGGAAGATCTACAC+AGG - chr4_1:21719676-21719695 None:intergenic 35.0%
CCATAGCCCTCAATAAATTT+CGG - chr4_1:21719690-21719709 None:intergenic 35.0%
! CTATTTGGAGTTGTGTAAAG+AGG - chr4_1:21719846-21719865 None:intergenic 35.0%
! GGAAATGAGTAGTTGCTATT+TGG - chr4_1:21719861-21719880 None:intergenic 35.0%
ATAGCAACTACTCATTTCCT+TGG + chr4_1:21719862-21719881 Msa0540130:intron 35.0%
!! ATGAATGTTTTGGGCATTTG+TGG - chr4_1:21720178-21720197 None:intergenic 35.0%
! ATCTGATCTTTTCCTTCGAA+TGG - chr4_1:21720210-21720229 None:intergenic 35.0%
TTTGTTTATACCGGTCAATC+TGG + chr4_1:21720251-21720270 Msa0540130:intron 35.0%
! AAATGCTACATCCTTTTCCA+TGG - chr4_1:21720307-21720326 None:intergenic 35.0%
ATCTCATGAAGTTGTACCAA+TGG - chr4_1:21720402-21720421 None:intergenic 35.0%
! TCCAACATACCACATTTTAG+AGG + chr4_1:21720468-21720487 Msa0540130:intron 35.0%
! CCAACATACCACATTTTAGA+GGG + chr4_1:21720469-21720488 Msa0540130:intron 35.0%
!!! TCGTTTTTCCCTCTAAAATG+TGG - chr4_1:21720480-21720499 None:intergenic 35.0%
! GAAAGAAGAGGAAGGATTTT+GGG + chr4_1:21720568-21720587 Msa0540130:intron 35.0%
! AAAGAAGAGGAAGGATTTTG+GGG + chr4_1:21720569-21720588 Msa0540130:intron 35.0%
GATATAGTTTCCCAAAAGGT+AGG - chr4_1:21720613-21720632 None:intergenic 35.0%
!!! TTTTTTCAGTTCCTCCAAAC+TGG - chr4_1:21720648-21720667 None:intergenic 35.0%
CCCACCCAAAAAAAAAAATC+AGG + chr4_1:21720810-21720829 Msa0540130:intron 35.0%
!!! CCATTTTATTTCATTGGCTC+TGG - chr4_1:21721238-21721257 None:intergenic 35.0%
CCAGAGCCAATGAAATAAAA+TGG + chr4_1:21721235-21721254 Msa0540130:intron 35.0%
!! GAAAAGAAGTTGGTACAGTA+AGG - chr4_1:21721272-21721291 None:intergenic 35.0%
CTTCGTGATATTAAAGTCCA+TGG - chr4_1:21721420-21721439 None:intergenic 35.0%
ATCCTACCTAGAATAAAGAG+AGG + chr4_1:21721488-21721507 Msa0540130:three_prime_UTR 35.0%
TCCTACCTAGAATAAAGAGA+GGG + chr4_1:21721489-21721508 Msa0540130:three_prime_UTR 35.0%
CTGCTACAAAAGGGATATTA+TGG - chr4_1:21721576-21721595 None:intergenic 35.0%
GAGAGAAGAAAAAGAGAAGA+GGG - chr4_1:21721668-21721687 None:intergenic 35.0%
TGAGAGAAGAAAAAGAGAAG+AGG - chr4_1:21721669-21721688 None:intergenic 35.0%
GTTAGACTGTTACAGGAATT+AGG + chr4_1:21721861-21721880 Msa0540130:three_prime_UTR 35.0%
ATTCACAATCTTAACCACAG+TGG + chr4_1:21722019-21722038 Msa0540130:three_prime_UTR 35.0%
ATGACTCAAATTCCAACTTC+AGG + chr4_1:21722076-21722095 Msa0540130:three_prime_UTR 35.0%
CAGGTAATCAGATTTAGACT+AGG + chr4_1:21722095-21722114 Msa0540130:three_prime_UTR 35.0%
GTTTATTGCAGTCAATAGCT+TGG - chr4_1:21722160-21722179 None:intergenic 35.0%
!!! GAAAAGCTTTTTAGGATGCA+TGG - chr4_1:21722424-21722443 None:intergenic 35.0%
!! ACTTGATTTGTTGCTTTAGC+AGG - chr4_1:21722573-21722592 None:intergenic 35.0%
!! GGCAGAAATCTTTAGGTTTT+TGG + chr4_1:21722630-21722649 Msa0540130:three_prime_UTR 35.0%
ACTATTGCGATTGTGATCTA+GGG - chr4_1:21722824-21722843 None:intergenic 35.0%
GTCAACTTCGATATCATGTT+AGG + chr4_1:21722842-21722861 Msa0540130:three_prime_UTR 35.0%
GATTGCAAACTCAAGAACTA+TGG + chr4_1:21722914-21722933 Msa0540130:three_prime_UTR 35.0%
TTAACGATCCGATCTTAGAT+CGG - chr4_1:21722985-21723004 None:intergenic 35.0%
AATCACACATCTACACATTC+GGG - chr4_1:21723078-21723097 None:intergenic 35.0%
CAATCACACATCTACACATT+CGG - chr4_1:21723079-21723098 None:intergenic 35.0%
CATTGATGAACACTAATCAC+AGG - chr4_1:21723200-21723219 None:intergenic 35.0%
GAGAAGAATGCTTAGCTTAT+TGG + chr4_1:21723497-21723516 Msa0540130:three_prime_UTR 35.0%
!! CTTCTTTTGACTCGCTTAGT+GGG - chr4_1:21713579-21713598 None:intergenic 40.0%
!! TCTTCTTTTGACTCGCTTAG+TGG - chr4_1:21713580-21713599 None:intergenic 40.0%
TTGCATGATCAGACAGAAAC+CGG - chr4_1:21713698-21713717 None:intergenic 40.0%
ATCAGAGAAGGAAAAAGCTC+AGG - chr4_1:21713735-21713754 None:intergenic 40.0%
!! TTTTTCCTTCTCTGATGACG+TGG + chr4_1:21713739-21713758 Msa0540130:CDS 40.0%
TTGTTTCGTGTTGGAGAAGT+TGG + chr4_1:21713768-21713787 Msa0540130:CDS 40.0%
TTGTTGAAGAGGATGTTACG+AGG + chr4_1:21713832-21713851 Msa0540130:CDS 40.0%
TGTGATCAATGTCGTGTTGT+TGG + chr4_1:21713870-21713889 Msa0540130:CDS 40.0%
GAATCGTTGAGTCAGATTCT+CGG + chr4_1:21713899-21713918 Msa0540130:intron 40.0%
AAAGTCAGACCAAACCATAG+TGG + chr4_1:21714315-21714334 Msa0540130:intron 40.0%
!! GGTTGGTGGATATGGAATTA+TGG + chr4_1:21714520-21714539 Msa0540130:intron 40.0%
AGGTCTTTGATATGCTGCAT+TGG - chr4_1:21714660-21714679 None:intergenic 40.0%
CAAAGACCTTGCACTAAATG+TGG + chr4_1:21714671-21714690 Msa0540130:CDS 40.0%
CTTGCTTCAGATAATTGGAG+AGG - chr4_1:21714701-21714720 None:intergenic 40.0%
! CTCTCCAATTATCTGAAGCA+AGG + chr4_1:21714699-21714718 Msa0540130:CDS 40.0%
CAAACAACAGTGTGAAGGTA+AGG - chr4_1:21714744-21714763 None:intergenic 40.0%
CCAATCAAACAACAGTGTGA+AGG - chr4_1:21714749-21714768 None:intergenic 40.0%
! CCTTCACACTGTTGTTTGAT+TGG + chr4_1:21714746-21714765 Msa0540130:intron 40.0%
CATTTCTGCTGATGATCTTG+AGG + chr4_1:21714836-21714855 Msa0540130:CDS 40.0%
AACAACACACATCTTCTGCA+TGG + chr4_1:21714885-21714904 Msa0540130:CDS 40.0%
!! CATGGTGTTGTACATGCTAA+TGG + chr4_1:21714903-21714922 Msa0540130:CDS 40.0%
GGTCACTTGCTTACTCTTAA+TGG + chr4_1:21714930-21714949 Msa0540130:CDS 40.0%
ACTCTTAATGGAAGAGAAGG+TGG + chr4_1:21714942-21714961 Msa0540130:CDS 40.0%
TCTCTCCGGATCTGATATTA+TGG + chr4_1:21714974-21714993 Msa0540130:CDS 40.0%
CTCTCCGGATCTGATATTAT+GGG + chr4_1:21714975-21714994 Msa0540130:CDS 40.0%
! TTTGTGCTGCTATGTCTGTT+AGG + chr4_1:21715012-21715031 Msa0540130:CDS 40.0%
TTACAGGAAGGTTACTGTGA+TGG + chr4_1:21715116-21715135 Msa0540130:intron 40.0%
GGCATTCATGGTATGGTAAT+TGG + chr4_1:21715193-21715212 Msa0540130:CDS 40.0%
TACCGAAGATGCATACAAGA+TGG + chr4_1:21715248-21715267 Msa0540130:CDS 40.0%
GTGACAAGGCAAACTCTTAA+AGG + chr4_1:21715591-21715610 Msa0540130:CDS 40.0%
GACAAGGCAAACTCTTAAAG+GGG + chr4_1:21715593-21715612 Msa0540130:CDS 40.0%
CAAGGGAAATCAGTTGCAAA+TGG + chr4_1:21715672-21715691 Msa0540130:CDS 40.0%
GCAATGGAGCTTAATCCATT+AGG - chr4_1:21715841-21715860 None:intergenic 40.0%
GAAATCACTTGCTCTTTGGA+AGG - chr4_1:21715871-21715890 None:intergenic 40.0%
CTTACAGTCAAGAAGCTTTC+TGG - chr4_1:21715986-21716005 None:intergenic 40.0%
CAAAATCGAGCAAATGACCT+CGG + chr4_1:21716023-21716042 Msa0540130:CDS 40.0%
AAAGGCAGCACAATTAACTC+AGG - chr4_1:21716126-21716145 None:intergenic 40.0%
! GACCTTTTGAATGAAGTCAC+TGG + chr4_1:21716162-21716181 Msa0540130:CDS 40.0%
CACCAGTGACTTCATTCAAA+AGG - chr4_1:21716167-21716186 None:intergenic 40.0%
TTTGTAGCCGTGAAACTTCT+AGG + chr4_1:21716219-21716238 Msa0540130:CDS 40.0%
TTAGGGTATACACACGATCT+CGG - chr4_1:21716257-21716276 None:intergenic 40.0%
! TGACCCCAGAAGGAATTTTA+GGG - chr4_1:21716274-21716293 None:intergenic 40.0%
! TTGACCCCAGAAGGAATTTT+AGG - chr4_1:21716275-21716294 None:intergenic 40.0%
!!! GTGCTAAGCCATTTTTAGCT+GGG - chr4_1:21716329-21716348 None:intergenic 40.0%
TGACTGCATTTGTGGTACTA+AGG + chr4_1:21716386-21716405 Msa0540130:CDS 40.0%
TGTGGTACTAAGGATGATGA+TGG + chr4_1:21716396-21716415 Msa0540130:CDS 40.0%
!! CTAAGGATGATGATGGAGAA+AGG + chr4_1:21716403-21716422 Msa0540130:CDS 40.0%
ATGTTAGCATGTGATACCTG+TGG + chr4_1:21716426-21716445 Msa0540130:CDS 40.0%
ATGTGTTAACTCAATCCGTG+TGG + chr4_1:21716521-21716540 Msa0540130:CDS 40.0%
TGTGTTAACTCAATCCGTGT+GGG + chr4_1:21716522-21716541 Msa0540130:CDS 40.0%
CACATATTGCAGAGATGAAG+CGG + chr4_1:21716569-21716588 Msa0540130:CDS 40.0%
AATCTCTGGTACAGAATCCT+TGG - chr4_1:21716718-21716737 None:intergenic 40.0%
! AACTGTCTGGAATCAATCTC+TGG - chr4_1:21716732-21716751 None:intergenic 40.0%
AGAGACAAAGTTCAACTGTC+TGG - chr4_1:21716745-21716764 None:intergenic 40.0%
TGTGTAAGACTTCCACAAAG+TGG - chr4_1:21717155-21717174 None:intergenic 40.0%
!!! GGTTTTAGAACTGCAGTTTC+TGG - chr4_1:21717392-21717411 None:intergenic 40.0%
GGTTTCATGAATTTGGCTAC+TGG - chr4_1:21717455-21717474 None:intergenic 40.0%
!!! GGTTTCATGATTTTGGCTAC+TGG - chr4_1:21717549-21717568 None:intergenic 40.0%
TCGGAGCATATCTTCATACA+TGG - chr4_1:21717570-21717589 None:intergenic 40.0%
ATGATGAAACCATGTAGGAG+GGG + chr4_1:21717642-21717661 Msa0540130:intron 40.0%
GAAGTGGAGAACATGAGAAA+TGG - chr4_1:21717671-21717690 None:intergenic 40.0%
ACATTTGGAGGAAAAGGGTT+GGG - chr4_1:21717810-21717829 None:intergenic 40.0%
TACATTTGGAGGAAAAGGGT+TGG - chr4_1:21717811-21717830 None:intergenic 40.0%
CCAGTACATTTGGAGGAAAA+GGG - chr4_1:21717815-21717834 None:intergenic 40.0%
TCCAGTACATTTGGAGGAAA+AGG - chr4_1:21717816-21717835 None:intergenic 40.0%
TATTGTTGGCCAAGAAGTTC+AGG + chr4_1:21717837-21717856 Msa0540130:intron 40.0%
GTCCTTAGTTGTTCTCAACA+TGG + chr4_1:21717864-21717883 Msa0540130:intron 40.0%
CCTTAGTTGTTCTCAACATG+GGG + chr4_1:21717866-21717885 Msa0540130:intron 40.0%
TAGTGGTAACCTTTGCAACT+AGG + chr4_1:21717931-21717950 Msa0540130:intron 40.0%
! AGCTCCTATTTGCTGCAAAT+GGG - chr4_1:21718009-21718028 None:intergenic 40.0%
!! ATCTGGAGAAAAGCACTCAT+AGG + chr4_1:21718124-21718143 Msa0540130:intron 40.0%
! GTGTCTGTTTTCTTTTGCCA+GGG - chr4_1:21718223-21718242 None:intergenic 40.0%
! TGTGTCTGTTTTCTTTTGCC+AGG - chr4_1:21718224-21718243 None:intergenic 40.0%
! ATGGCCTTGGCAAAAGAAAA+CGG + chr4_1:21718257-21718276 Msa0540130:intron 40.0%
AGGATTATTGTGGAAGAGTG+TGG + chr4_1:21718312-21718331 Msa0540130:intron 40.0%
AAGTGGGAAGTCTATTGATG+AGG + chr4_1:21718363-21718382 Msa0540130:intron 40.0%
GCATAATCCCAATAGGCAAA+AGG + chr4_1:21718404-21718423 Msa0540130:intron 40.0%
GTATGTTCAAACTAATCGGG+GGG - chr4_1:21718548-21718567 None:intergenic 40.0%
TCTAGCGAATGCATCAACAA+AGG + chr4_1:21718666-21718685 Msa0540130:intron 40.0%
!! AAACCCAGTAGTGGATGTAA+AGG + chr4_1:21718702-21718721 Msa0540130:intron 40.0%
!! AACCCAGTAGTGGATGTAAA+GGG + chr4_1:21718703-21718722 Msa0540130:intron 40.0%
!! TAATTACAGAGGGGCACTAT+AGG + chr4_1:21718753-21718772 Msa0540130:intron 40.0%
GTGGTACTAGATGAATGAGA+GGG + chr4_1:21718775-21718794 Msa0540130:intron 40.0%
! ATATGCACTTCCTGTCGTTT+GGG - chr4_1:21718817-21718836 None:intergenic 40.0%
TATATGCACTTCCTGTCGTT+TGG - chr4_1:21718818-21718837 None:intergenic 40.0%
CGTACAATACACCAAAATGG+TGG - chr4_1:21718914-21718933 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG - chr4_1:21718917-21718936 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG - chr4_1:21718946-21718965 None:intergenic 40.0%
GGATCATCTAGAAAGAAGAG+AGG - chr4_1:21719163-21719182 None:intergenic 40.0%
ACTGACACATGTCAGTCATT+TGG - chr4_1:21719316-21719335 None:intergenic 40.0%
GTCAAGCTATTTATGAGGCT+AGG - chr4_1:21719351-21719370 None:intergenic 40.0%
AAAATTTGCATTGGGGTCGT+TGG - chr4_1:21719482-21719501 None:intergenic 40.0%
AGAAATTGAAGACCAAAGGG+AGG - chr4_1:21719540-21719559 None:intergenic 40.0%
CCGAAATTTATTGAGGGCTA+TGG + chr4_1:21719687-21719706 Msa0540130:intron 40.0%
!! TAAAGCAGATGGAAGCATCA+TGG - chr4_1:21719787-21719806 None:intergenic 40.0%
!! ATACAAGAAGGTGTTTGCCA+AGG - chr4_1:21719939-21719958 None:intergenic 40.0%
ATGGAGAACATGCCTTGATA+AGG - chr4_1:21720014-21720033 None:intergenic 40.0%
AGATTGAGGAGATGCCATAA+GGG - chr4_1:21720075-21720094 None:intergenic 40.0%
! GAATTTTCAGCAAGCATCTG+AGG - chr4_1:21720101-21720120 None:intergenic 40.0%
!! CATCACTTTTCACCATTCGA+AGG + chr4_1:21720195-21720214 Msa0540130:intron 40.0%
GATCAGATCATATTTGGCAG+TGG + chr4_1:21720222-21720241 Msa0540130:intron 40.0%
!! CCCTCTAAAATGTGGTATGT+TGG - chr4_1:21720472-21720491 None:intergenic 40.0%
AAAGACCATGCCTTTCGTTT+GGG + chr4_1:21720535-21720554 Msa0540130:intron 40.0%
TAAATCCCAAACGAAAGGCA+TGG - chr4_1:21720543-21720562 None:intergenic 40.0%
! ATGCCTTTCGTTTGGGATTT+AGG + chr4_1:21720542-21720561 Msa0540130:intron 40.0%
CTTCCTAAATCCCAAACGAA+AGG - chr4_1:21720548-21720567 None:intergenic 40.0%
! CTTTCGTTTGGGATTTAGGA+AGG + chr4_1:21720546-21720565 Msa0540130:intron 40.0%
GGATTTAGGAAGGAAAGAAG+AGG + chr4_1:21720556-21720575 Msa0540130:intron 40.0%
TTAGGAAGGAAAGAAGAGGA+AGG + chr4_1:21720560-21720579 Msa0540130:intron 40.0%
! GGAAAGAAGAGGAAGGATTT+TGG + chr4_1:21720567-21720586 Msa0540130:intron 40.0%
! TCTTTTCAGATCCACCAGTT+TGG + chr4_1:21720631-21720650 Msa0540130:intron 40.0%
!!! TCTATATCCTTTTGAGGCGA+AGG - chr4_1:21720777-21720796 None:intergenic 40.0%
GTTGTGGGTTTGAGTCATAA+GGG + chr4_1:21721145-21721164 Msa0540130:intron 40.0%
TTGTGGGTTTGAGTCATAAG+GGG + chr4_1:21721146-21721165 Msa0540130:intron 40.0%
TTTGAGTCATAAGGGGTAAG+TGG + chr4_1:21721153-21721172 Msa0540130:intron 40.0%
TGGTTCAAGGGAAAAGAAGT+TGG - chr4_1:21721282-21721301 None:intergenic 40.0%
TGTCTTGGTAAGTGGTTCAA+GGG - chr4_1:21721294-21721313 None:intergenic 40.0%
TTGTCTTGGTAAGTGGTTCA+AGG - chr4_1:21721295-21721314 None:intergenic 40.0%
TATGTTGAGTGGAGTTGTCT+TGG - chr4_1:21721309-21721328 None:intergenic 40.0%
!! ATGGATACTCTATAGTGGGT+GGG - chr4_1:21721401-21721420 None:intergenic 40.0%
GTCCATGGATACTCTATAGT+GGG - chr4_1:21721405-21721424 None:intergenic 40.0%
AGTCCATGGATACTCTATAG+TGG - chr4_1:21721406-21721425 None:intergenic 40.0%
CCTACCTAGAATAAAGAGAG+GGG + chr4_1:21721490-21721509 Msa0540130:three_prime_UTR 40.0%
TCAACCCCTCTCTTTATTCT+AGG - chr4_1:21721497-21721516 None:intergenic 40.0%
GGGGTTGAAAAATGATAAGC+CGG + chr4_1:21721509-21721528 Msa0540130:three_prime_UTR 40.0%
GGGTTGAAAAATGATAAGCC+GGG + chr4_1:21721510-21721529 Msa0540130:three_prime_UTR 40.0%
TTGTCTGCATAACCCTTGAA+GGG - chr4_1:21721712-21721731 None:intergenic 40.0%
ATTGTCTGCATAACCCTTGA+AGG - chr4_1:21721713-21721732 None:intergenic 40.0%
GGTTATGCAGACAATGTGAT+GGG + chr4_1:21721718-21721737 Msa0540130:three_prime_UTR 40.0%
TCACGTGATAGATTGGAAGT+TGG - chr4_1:21721996-21722015 None:intergenic 40.0%
CCAATTTATTGATGCCACTG+TGG - chr4_1:21722036-21722055 None:intergenic 40.0%
CCACAGTGGCATCAATAAAT+TGG + chr4_1:21722033-21722052 Msa0540130:three_prime_UTR 40.0%
GACTATTGCGATTGTGATCT+AGG - chr4_1:21722825-21722844 None:intergenic 40.0%
TCACATCGGAATCACACATT+CGG + chr4_1:21722945-21722964 Msa0540130:three_prime_UTR 40.0%
! CAGACGTTCAGATTCTAGTT+AGG - chr4_1:21723030-21723049 None:intergenic 40.0%
CATCTACACATTCGGGATAT+TGG - chr4_1:21723071-21723090 None:intergenic 40.0%
GTAATTCTGTAACCTAGCTC+TGG - chr4_1:21723124-21723143 None:intergenic 40.0%
CAACAGTTTCGTCAACATCA+AGG - chr4_1:21723581-21723600 None:intergenic 40.0%
GGTTTCTGTCTGATCATGCA+AGG + chr4_1:21713697-21713716 Msa0540130:intron 45.0%
AGAGAAGGAAAAAGCTCAGG+AGG - chr4_1:21713732-21713751 None:intergenic 45.0%
! TGGCAGATCTTGTTTCGTGT+TGG + chr4_1:21713759-21713778 Msa0540130:CDS 45.0%
AGGTGATGTTTCGTCTGGTT+TGG + chr4_1:21713797-21713816 Msa0540130:CDS 45.0%
GAGTCAGATTCTCGGTTCTT+AGG + chr4_1:21713907-21713926 Msa0540130:intron 45.0%
TGATGTGGGATCATGTGATG+TGG + chr4_1:21714495-21714514 Msa0540130:intron 45.0%
GATCATGTGATGTGGTTGGT+TGG + chr4_1:21714503-21714522 Msa0540130:intron 45.0%
!! ATGTGGTTGGTTGGTGGATA+TGG + chr4_1:21714512-21714531 Msa0540130:intron 45.0%
TGATATCGCTTTCGACACAC+AGG - chr4_1:21714611-21714630 None:intergenic 45.0%
GGAGTTCCACATTTAGTGCA+AGG - chr4_1:21714680-21714699 None:intergenic 45.0%
CTGCTGATGATCTTGAGGAA+TGG + chr4_1:21714841-21714860 Msa0540130:CDS 45.0%
TTGCTTCATGCAATTGCCAG+AGG + chr4_1:21715171-21715190 Msa0540130:CDS 45.0%
TGCTTCATGCAATTGCCAGA+GGG + chr4_1:21715172-21715191 Msa0540130:CDS 45.0%
! TGGGGTTATGAATTTGGGAC+TGG + chr4_1:21715213-21715232 Msa0540130:CDS 45.0%
CGCCATCTTGTATGCATCTT+CGG - chr4_1:21715253-21715272 None:intergenic 45.0%
CGAAGATGCATACAAGATGG+CGG + chr4_1:21715251-21715270 Msa0540130:CDS 45.0%
TGGAACGATAATGAGGACAG+GGG - chr4_1:21715297-21715316 None:intergenic 45.0%
CTGGAACGATAATGAGGACA+GGG - chr4_1:21715298-21715317 None:intergenic 45.0%
TCGATCCTGGAACGATAATG+AGG - chr4_1:21715304-21715323 None:intergenic 45.0%
TCATTATCGTTCCAGGATCG+AGG + chr4_1:21715303-21715322 Msa0540130:CDS 45.0%
ACAGACTGTACAGGGTTATG+AGG - chr4_1:21715330-21715349 None:intergenic 45.0%
GTTCAGTTTCAGCCAATGAC+TGG - chr4_1:21715365-21715384 None:intergenic 45.0%
GACGAGAAATGATGTCGAAG+AGG + chr4_1:21715509-21715528 Msa0540130:CDS 45.0%
TGCATCAAGTGCCTGTAATG+AGG + chr4_1:21715560-21715579 Msa0540130:CDS 45.0%
TGCCTGTAATGAGGCCAAAT+GGG + chr4_1:21715569-21715588 Msa0540130:CDS 45.0%
AGTTTGCCTTGTCACCCATT+TGG - chr4_1:21715586-21715605 None:intergenic 45.0%
CAAACTCTTAAAGGGGCAGT+GGG + chr4_1:21715600-21715619 Msa0540130:CDS 45.0%
TTCGGTCTTAAGCACTTGCA+AGG + chr4_1:21715654-21715673 Msa0540130:CDS 45.0%
TCGGTCTTAAGCACTTGCAA+GGG + chr4_1:21715655-21715674 Msa0540130:CDS 45.0%
! AGATTGGCTCATGTGCCTAA+TGG + chr4_1:21715823-21715842 Msa0540130:intron 45.0%
! TTTGGAAGGATGGCTTGCAA+TGG - chr4_1:21715857-21715876 None:intergenic 45.0%
! TCACTTGCTCTTTGGAAGGA+TGG - chr4_1:21715867-21715886 None:intergenic 45.0%
TGCCTTCAGCTCTTAAGATC+TGG + chr4_1:21716049-21716068 Msa0540130:CDS 45.0%
CACCAGATCTTAAGAGCTGA+AGG - chr4_1:21716054-21716073 None:intergenic 45.0%
! ATGGGTGGTCTTCTTTAGGA+TGG - chr4_1:21716095-21716114 None:intergenic 45.0%
!! GCCGTGAAACTTCTAGGATA+TGG + chr4_1:21716225-21716244 Msa0540130:CDS 45.0%
TAGGGTATACACACGATCTC+GGG - chr4_1:21716256-21716275 None:intergenic 45.0%
GGAGAATGCCCAGCTAAAAA+TGG + chr4_1:21716318-21716337 Msa0540130:CDS 45.0%
!!! CGTGCTAAGCCATTTTTAGC+TGG - chr4_1:21716330-21716349 None:intergenic 45.0%
CTTCTGTTCCTCTCTCCATT+CGG - chr4_1:21716356-21716375 None:intergenic 45.0%
TGGAGAGAGGAACAGAAGAA+TGG + chr4_1:21716358-21716377 Msa0540130:CDS 45.0%
GAGAGGAACAGAAGAATGGA+AGG + chr4_1:21716362-21716381 Msa0540130:CDS 45.0%
TGGAAGGTTGACTGCATTTG+TGG + chr4_1:21716378-21716397 Msa0540130:CDS 45.0%
ACTGTCAATTCCAGCACATC+TGG - chr4_1:21716466-21716485 None:intergenic 45.0%
!! CTGGAATTGACAGTGCTGAT+GGG + chr4_1:21716472-21716491 Msa0540130:CDS 45.0%
ATATTGCAGAGATGAAGCGG+TGG + chr4_1:21716572-21716591 Msa0540130:CDS 45.0%
AGGGCAGTTATATGGCATCA+TGG - chr4_1:21716939-21716958 None:intergenic 45.0%
CTTACACAAGTGCAGTGCAT+CGG + chr4_1:21717167-21717186 Msa0540130:intron 45.0%
AAATGGTTTCCCCTCCTACA+TGG - chr4_1:21717654-21717673 None:intergenic 45.0%
! CCCTTTTCCTCCAAATGTAC+TGG + chr4_1:21717812-21717831 Msa0540130:intron 45.0%
AGGACAACTCCTGAACTTCT+TGG - chr4_1:21717849-21717868 None:intergenic 45.0%
CCCCATGTTGAGAACAACTA+AGG - chr4_1:21717869-21717888 None:intergenic 45.0%
TAAGGCTTGCCTAGTTGCAA+AGG - chr4_1:21717943-21717962 None:intergenic 45.0%
ATGGGTATTCCACACCAAAG+AGG - chr4_1:21717991-21718010 None:intergenic 45.0%
! GAGCTCCTATTTGCTGCAAA+TGG - chr4_1:21718010-21718029 None:intergenic 45.0%
CAAATAGGAGCTCTGTCAAG+AGG + chr4_1:21718017-21718036 Msa0540130:intron 45.0%
CATTGCTCCAGAACAAAACC+TGG - chr4_1:21718058-21718077 None:intergenic 45.0%
! TGGCCTTGGCAAAAGAAAAC+GGG + chr4_1:21718258-21718277 Msa0540130:intron 45.0%
! TTGTGGAAGAGTGTGGTGTA+AGG + chr4_1:21718319-21718338 Msa0540130:intron 45.0%
! AGCTCTGCCTTTTGCCTATT+GGG - chr4_1:21718414-21718433 None:intergenic 45.0%
! ACATTGTGGTAGTGAGTGTG+AGG + chr4_1:21718467-21718486 Msa0540130:intron 45.0%
CTCCCTTTACATCCACTACT+GGG - chr4_1:21718708-21718727 None:intergenic 45.0%
GGTGGTACTAGATGAATGAG+AGG + chr4_1:21718774-21718793 Msa0540130:intron 45.0%
ACTAAAGCTCTTGCATACGC+AGG + chr4_1:21718874-21718893 Msa0540130:intron 45.0%
CTAAAGCTCTTGCATACGCA+GGG + chr4_1:21718875-21718894 Msa0540130:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr4_1:21718951-21718970 Msa0540130:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr4_1:21718991-21719010 None:intergenic 45.0%
CTTGGATGGGCAAATCTAGA+AGG + chr4_1:21719093-21719112 Msa0540130:intron 45.0%
CAGGGGTCAAGCTATTTATG+AGG - chr4_1:21719356-21719375 None:intergenic 45.0%
TAGTACTGCGGAGTAGAGTA+TGG - chr4_1:21719972-21719991 None:intergenic 45.0%
TACTCTACTCCGCAGTACTA+TGG + chr4_1:21719972-21719991 Msa0540130:intron 45.0%
!! TGATAAGGCATAGCTCTGGA+GGG - chr4_1:21719999-21720018 None:intergenic 45.0%
!! TTGATAAGGCATAGCTCTGG+AGG - chr4_1:21720000-21720019 None:intergenic 45.0%
TCCAGAGCTATGCCTTATCA+AGG + chr4_1:21719999-21720018 Msa0540130:intron 45.0%
GATTGAGGAGATGCCATAAG+GGG - chr4_1:21720074-21720093 None:intergenic 45.0%
GAGATTGAGGAGATGCCATA+AGG - chr4_1:21720076-21720095 None:intergenic 45.0%
!! ACACTACTAGCTCTGTGAAC+TGG + chr4_1:21720123-21720142 Msa0540130:intron 45.0%
TTTGGGCATTTGTGGTCACA+TGG - chr4_1:21720170-21720189 None:intergenic 45.0%
AAAGCAGAGCTCATCATCGA+GGG - chr4_1:21720379-21720398 None:intergenic 45.0%
TGATGAGCTCTGCTTTCCAT+TGG + chr4_1:21720383-21720402 Msa0540130:intron 45.0%
CAAAGACCATGCCTTTCGTT+TGG + chr4_1:21720534-21720553 Msa0540130:intron 45.0%
!!! AGGAAGGATTTTGGGGTGAA+AGG + chr4_1:21720576-21720595 Msa0540130:intron 45.0%
!!! GGAAGGATTTTGGGGTGAAA+GGG + chr4_1:21720577-21720596 Msa0540130:intron 45.0%
! AGGATTGCTCCCTACCTTTT+GGG + chr4_1:21720600-21720619 Msa0540130:intron 45.0%
TTTCAGATCCACCAGTTTGG+AGG + chr4_1:21720634-21720653 Msa0540130:intron 45.0%
TTTCAGTTCCTCCAAACTGG+TGG - chr4_1:21720645-21720664 None:intergenic 45.0%
GTTCAACTTGGGTTCCATGA+GGG + chr4_1:21721011-21721030 Msa0540130:intron 45.0%
ACAACAAAGTGCAGCCTAGT+TGG + chr4_1:21721097-21721116 Msa0540130:intron 45.0%
GACTCAAACCCACAACCATT+GGG - chr4_1:21721141-21721160 None:intergenic 45.0%
TGACTCAAACCCACAACCAT+TGG - chr4_1:21721142-21721161 None:intergenic 45.0%
GGTTGTGGGTTTGAGTCATA+AGG + chr4_1:21721144-21721163 Msa0540130:intron 45.0%
AGTGGAGTTGTCTTGGTAAG+TGG - chr4_1:21721302-21721321 None:intergenic 45.0%
ACTGTTGAAGAGATCAGTGG+AGG - chr4_1:21721374-21721393 None:intergenic 45.0%
GCTACTGTTGAAGAGATCAG+TGG - chr4_1:21721377-21721396 None:intergenic 45.0%
! CATGGATACTCTATAGTGGG+TGG - chr4_1:21721402-21721421 None:intergenic 45.0%
! CACCCACTATAGAGTATCCA+TGG + chr4_1:21721400-21721419 Msa0540130:three_prime_UTR 45.0%
CCCCTCTCTTTATTCTAGGT+AGG - chr4_1:21721493-21721512 None:intergenic 45.0%
GATAAGCCGGGATAGTAACA+AGG + chr4_1:21721522-21721541 Msa0540130:three_prime_UTR 45.0%
AGATCTTGCCATGCTGAGAT+GGG - chr4_1:21721636-21721655 None:intergenic 45.0%
AAGATCTTGCCATGCTGAGA+TGG - chr4_1:21721637-21721656 None:intergenic 45.0%
! TAACCCTTGAAGGGTGTATG+AGG - chr4_1:21721703-21721722 None:intergenic 45.0%
GGGTTATGCAGACAATGTGA+TGG + chr4_1:21721717-21721736 Msa0540130:three_prime_UTR 45.0%
GATTTGAGGAGCAAAAAGCC+TGG + chr4_1:21721811-21721830 Msa0540130:three_prime_UTR 45.0%
CTGTAACAGTCTAACCACTG+TGG - chr4_1:21721856-21721875 None:intergenic 45.0%
CACAGTGGTTAGACTGTTAC+AGG + chr4_1:21721854-21721873 Msa0540130:three_prime_UTR 45.0%
! GTGATCTAGGGTTAGCAGTT+TGG - chr4_1:21722812-21722831 None:intergenic 45.0%
GAAGAAGCTTGGGATTTGAG+AGG + chr4_1:21723551-21723570 Msa0540130:three_prime_UTR 45.0%
!!! TTTTTTTCTATTTTTTTTTT+TGG + chr4_1:21713934-21713953 Msa0540130:intron 5.0%
!!! TTTTTTCTATTTTTTTTTTT+GGG + chr4_1:21713935-21713954 Msa0540130:intron 5.0%
!!! TCTTTAATTTTTATTTTTAA+TGG - chr4_1:21720513-21720532 None:intergenic 5.0%
TTTCTCTCATTCCCAACCGC+CGG + chr4_1:21713621-21713640 Msa0540130:CDS 50.0%
GAAACCGGTAAACACCGTTC+CGG - chr4_1:21713683-21713702 None:intergenic 50.0%
ATCTGCCACGTCATCAGAGA+AGG - chr4_1:21713747-21713766 None:intergenic 50.0%
!! CGTGTTGGAGAAGTTGGTGA+TGG + chr4_1:21713774-21713793 Msa0540130:CDS 50.0%
!! GTTGGAGAAGTTGGTGATGG+AGG + chr4_1:21713777-21713796 Msa0540130:CDS 50.0%
GATGGAGGTGATGTTTCGTC+TGG + chr4_1:21713792-21713811 Msa0540130:CDS 50.0%
AAGAGGATGTTACGAGGTCG+AGG + chr4_1:21713838-21713857 Msa0540130:CDS 50.0%
GTGGGATCATGTGATGTGGT+TGG + chr4_1:21714499-21714518 Msa0540130:intron 50.0%
! CATGTGATGTGGTTGGTTGG+TGG + chr4_1:21714506-21714525 Msa0540130:intron 50.0%
!! CAATTGCCAGAGGGCATTCA+TGG + chr4_1:21715181-21715200 Msa0540130:CDS 50.0%
ACCATACCATGAATGCCCTC+TGG - chr4_1:21715190-21715209 None:intergenic 50.0%
! TAATGAGGACAGGGGCATGT+TGG - chr4_1:21715289-21715308 None:intergenic 50.0%
CCTGGAACGATAATGAGGAC+AGG - chr4_1:21715299-21715318 None:intergenic 50.0%
CCTGTCCTCATTATCGTTCC+AGG + chr4_1:21715296-21715315 Msa0540130:CDS 50.0%
TTAGCAGTCTCTGCACTCCT+GGG - chr4_1:21715447-21715466 None:intergenic 50.0%
TTTAGCAGTCTCTGCACTCC+TGG - chr4_1:21715448-21715467 None:intergenic 50.0%
GTGCCTGTAATGAGGCCAAA+TGG + chr4_1:21715568-21715587 Msa0540130:CDS 50.0%
CACCCATTTGGCCTCATTAC+AGG - chr4_1:21715574-21715593 None:intergenic 50.0%
ATGAGGCCAAATGGGTGACA+AGG + chr4_1:21715577-21715596 Msa0540130:CDS 50.0%
GCAAACTCTTAAAGGGGCAG+TGG + chr4_1:21715599-21715618 Msa0540130:CDS 50.0%
TCCCCAGAGCTTCTTGACTT+CGG + chr4_1:21715636-21715655 Msa0540130:CDS 50.0%
ACCGAAGTCAAGAAGCTCTG+GGG - chr4_1:21715640-21715659 None:intergenic 50.0%
GACCGAAGTCAAGAAGCTCT+GGG - chr4_1:21715641-21715660 None:intergenic 50.0%
AGACCGAAGTCAAGAAGCTC+TGG - chr4_1:21715642-21715661 None:intergenic 50.0%
GCACATGAGCCAATCTGTCA+AGG - chr4_1:21715819-21715838 None:intergenic 50.0%
!! GGTGATGGGTGGTCTTCTTT+AGG - chr4_1:21716099-21716118 None:intergenic 50.0%
TTAACTCAGGCGGTGGTGAT+GGG - chr4_1:21716113-21716132 None:intergenic 50.0%
ATTAACTCAGGCGGTGGTGA+TGG - chr4_1:21716114-21716133 None:intergenic 50.0%
AGCACAATTAACTCAGGCGG+TGG - chr4_1:21716120-21716139 None:intergenic 50.0%
GGCAGCACAATTAACTCAGG+CGG - chr4_1:21716123-21716142 None:intergenic 50.0%
!! TTCCTTCTGGGGTCAACCAA+TGG + chr4_1:21716279-21716298 Msa0540130:CDS 50.0%
! TACCATTGGTTGACCCCAGA+AGG - chr4_1:21716284-21716303 None:intergenic 50.0%
TGGCTTAGCACGATTCCGAA+TGG + chr4_1:21716338-21716357 Msa0540130:CDS 50.0%
CATGTGATACCTGTGGTGTC+TGG + chr4_1:21716433-21716452 Msa0540130:CDS 50.0%
! GCTGGAATTGACAGTGCTGA+TGG + chr4_1:21716471-21716490 Msa0540130:CDS 50.0%
AATCCGTGTGGGAGATAACC+AGG + chr4_1:21716533-21716552 Msa0540130:CDS 50.0%
AAGCCTGGTTATCTCCCACA+CGG - chr4_1:21716539-21716558 None:intergenic 50.0%
ACTAGGGTCTCGTGTTATGC+TGG + chr4_1:21716686-21716705 Msa0540130:three_prime_UTR 50.0%
CAAAGTGGTTGTCTCCTGGT+TGG - chr4_1:21717140-21717159 None:intergenic 50.0%
ACCAGGAGACAACCACTTTG+TGG + chr4_1:21717140-21717159 Msa0540130:intron 50.0%
TCCACAAAGTGGTTGTCTCC+TGG - chr4_1:21717144-21717163 None:intergenic 50.0%
ATGCATCCTCTCAAGTCACC+AGG + chr4_1:21717772-21717791 Msa0540130:intron 50.0%
TGCATCCTCTCAAGTCACCA+GGG + chr4_1:21717773-21717792 Msa0540130:intron 50.0%
AAAAGGGTTGGGAGCTCATC+AGG - chr4_1:21717799-21717818 None:intergenic 50.0%
GGAGCTCTGTCAAGAGGTAA+AGG + chr4_1:21718023-21718042 Msa0540130:intron 50.0%
AGGTAAAGGAACCAGTGTCC+AGG + chr4_1:21718037-21718056 Msa0540130:intron 50.0%
CCAGAACAAAACCTGGACAC+TGG - chr4_1:21718051-21718070 None:intergenic 50.0%
!!! CCAGTGTCCAGGTTTTGTTC+TGG + chr4_1:21718048-21718067 Msa0540130:intron 50.0%
CAAGACAGCTAGAGATCCGA+AGG + chr4_1:21718096-21718115 Msa0540130:intron 50.0%
! GCACTCATAGGCTTTATGGG+AGG + chr4_1:21718136-21718155 Msa0540130:intron 50.0%
TTATGACTGTTGTACGGCCC+TGG + chr4_1:21718203-21718222 Msa0540130:intron 50.0%
! GTGCCCGTTTTCTTTTGCCA+AGG - chr4_1:21718264-21718283 None:intergenic 50.0%
! CAGCTCTGCCTTTTGCCTAT+TGG - chr4_1:21718415-21718434 None:intergenic 50.0%
AGGCAAAAGGCAGAGCTGTT+TGG + chr4_1:21718417-21718436 Msa0540130:intron 50.0%
GGCAAAAGGCAGAGCTGTTT+GGG + chr4_1:21718418-21718437 Msa0540130:intron 50.0%
CAGAGCTGTTTGGGCAAGTA+AGG + chr4_1:21718427-21718446 Msa0540130:intron 50.0%
GCTCCCTTTACATCCACTAC+TGG - chr4_1:21718709-21718728 None:intergenic 50.0%
!! TTACAGAGGGGCACTATAGG+TGG + chr4_1:21718756-21718775 Msa0540130:intron 50.0%
! TGGAAAGGGTCCCACCATTT+TGG + chr4_1:21718900-21718919 Msa0540130:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr4_1:21718984-21719003 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr4_1:21718985-21719004 None:intergenic 50.0%
CAAGGTGAGACTTGACGCAA+CGG - chr4_1:21719018-21719037 None:intergenic 50.0%
ATTGAGGGCTATGGTGAACG+AGG + chr4_1:21719696-21719715 Msa0540130:intron 50.0%
TATGGTGAACGAGGTGGTCT+TGG + chr4_1:21719705-21719724 Msa0540130:intron 50.0%
GTACAAGCTTGGGTCTTCCA+AGG - chr4_1:21719882-21719901 None:intergenic 50.0%
TTGGGTCAGGGTACAAGCTT+GGG - chr4_1:21719892-21719911 None:intergenic 50.0%
!! AGGTTGTGGGAAGGTACCTT+GGG - chr4_1:21719910-21719929 None:intergenic 50.0%
CACCTTCTTGTATGCTCCCT+TGG + chr4_1:21719946-21719965 Msa0540130:intron 50.0%
GCCTTGATAAGGCATAGCTC+TGG - chr4_1:21720003-21720022 None:intergenic 50.0%
!! ATAAGGGGAGGCATCATGGA+GGG - chr4_1:21720059-21720078 None:intergenic 50.0%
AGCATCTGAGGACGAGATTG+AGG - chr4_1:21720089-21720108 None:intergenic 50.0%
ATGCGAAGAGCCAGATTGAC+CGG - chr4_1:21720264-21720283 None:intergenic 50.0%
GAAAGCAGAGCTCATCATCG+AGG - chr4_1:21720380-21720399 None:intergenic 50.0%
!!! AGGATTTTGGGGTGAAAGGG+AGG + chr4_1:21720580-21720599 Msa0540130:intron 50.0%
! GAGGATTGCTCCCTACCTTT+TGG + chr4_1:21720599-21720618 Msa0540130:intron 50.0%
GTTATACGAAGCGGCTGAGA+GGG - chr4_1:21720721-21720740 None:intergenic 50.0%
TGTTATACGAAGCGGCTGAG+AGG - chr4_1:21720722-21720741 None:intergenic 50.0%
TCACAAGCCTTCGCCTCAAA+AGG + chr4_1:21720767-21720786 Msa0540130:intron 50.0%
GGTTCAACTTGGGTTCCATG+AGG + chr4_1:21721010-21721029 Msa0540130:intron 50.0%
AACTTGGGTTCCATGAGGGA+TGG + chr4_1:21721015-21721034 Msa0540130:intron 50.0%
ACTTGGGTTCCATGAGGGAT+GGG + chr4_1:21721016-21721035 Msa0540130:intron 50.0%
ATTTGCTTCCCCATCCCTCA+TGG - chr4_1:21721028-21721047 None:intergenic 50.0%
! GGTGAAGCGTCTTACCAACT+AGG - chr4_1:21721114-21721133 None:intergenic 50.0%
TCACCTACACCCAATGGTTG+TGG + chr4_1:21721129-21721148 Msa0540130:intron 50.0%
CACCTACACCCAATGGTTGT+GGG + chr4_1:21721130-21721149 Msa0540130:intron 50.0%
AACCCACAACCATTGGGTGT+AGG - chr4_1:21721135-21721154 None:intergenic 50.0%
CTCGGTCCTTGTTACTATCC+CGG - chr4_1:21721531-21721550 None:intergenic 50.0%
ACAGTGGCGCTGCTACAAAA+GGG - chr4_1:21721585-21721604 None:intergenic 50.0%
TACAGTGGCGCTGCTACAAA+AGG - chr4_1:21721586-21721605 None:intergenic 50.0%
TCTCTTCTCCCATCTCAGCA+TGG + chr4_1:21721625-21721644 Msa0540130:three_prime_UTR 50.0%
GTGCCTCATACACCCTTCAA+GGG + chr4_1:21721697-21721716 Msa0540130:three_prime_UTR 50.0%
GATGGGCATGTAGATCTGCT+AGG + chr4_1:21721735-21721754 Msa0540130:three_prime_UTR 50.0%
! AGTGACCGCCGATCTAAGAT+CGG + chr4_1:21722974-21722993 Msa0540130:three_prime_UTR 50.0%
ACGATCCGATCTTAGATCGG+CGG - chr4_1:21722982-21723001 None:intergenic 50.0%
CGTTGCGATCGAAGAAGCTT+GGG + chr4_1:21723541-21723560 Msa0540130:three_prime_UTR 50.0%
CAGAAACATCTCCGGCGGTT+GGG - chr4_1:21713635-21713654 None:intergenic 55.0%
CGGTAAACACCGTTCCGGAA+CGG - chr4_1:21713678-21713697 None:intergenic 55.0%
CGTTCCGGAACGGTGTTTAC+CGG + chr4_1:21713676-21713695 Msa0540130:CDS 55.0%
!! GCCAGAGGGCATTCATGGTA+TGG + chr4_1:21715186-21715205 Msa0540130:CDS 55.0%
GGTTATGAGGTCCTCGATCC+TGG - chr4_1:21715317-21715336 None:intergenic 55.0%
! TGATGTCGAAGAGGTGCAGC+AGG + chr4_1:21715518-21715537 Msa0540130:intron 55.0%
! GGTGCAGCAGGCTTTGATGA+AGG + chr4_1:21715530-21715549 Msa0540130:intron 55.0%
CTCTTAAAGGGGCAGTGGGT+AGG + chr4_1:21715604-21715623 Msa0540130:CDS 55.0%
GCACGATTCCGAATGGAGAG+AGG + chr4_1:21716345-21716364 Msa0540130:CDS 55.0%
TGGCTGCATACCAGATGTGC+TGG + chr4_1:21716453-21716472 Msa0540130:CDS 55.0%
ATACGACCTGTGATGCTGCG+AGG + chr4_1:21717709-21717728 Msa0540130:intron 55.0%
TACGACCTGTGATGCTGCGA+GGG + chr4_1:21717710-21717729 Msa0540130:intron 55.0%
GACAGCTAGAGATCCGAAGG+CGG + chr4_1:21718099-21718118 Msa0540130:intron 55.0%
ACAGCTAGAGATCCGAAGGC+GGG + chr4_1:21718100-21718119 Msa0540130:intron 55.0%
TTTCTCCAGATGCCCGCCTT+CGG - chr4_1:21718115-21718134 None:intergenic 55.0%
GTCGTTTGGGCAAAGCACAC+AGG - chr4_1:21718804-21718823 None:intergenic 55.0%
GTGTGCTTTGCCCAAACGAC+AGG + chr4_1:21718804-21718823 Msa0540130:intron 55.0%
TGCATACGCAGGGTCTGGAA+AGG + chr4_1:21718885-21718904 Msa0540130:intron 55.0%
GCATACGCAGGGTCTGGAAA+GGG + chr4_1:21718886-21718905 Msa0540130:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_1:21718972-21718991 None:intergenic 55.0%
AAAGAAGAGAGGGCCCTGAC+TGG - chr4_1:21719152-21719171 None:intergenic 55.0%
GACGACTCTCCGGTATGTGA+CGG - chr4_1:21719506-21719525 None:intergenic 55.0%
CACATACCGGAGAGTCGTCT+TGG + chr4_1:21719507-21719526 Msa0540130:intron 55.0%
!! ACGAGGTGGTCTTGGTGATG+TGG + chr4_1:21719713-21719732 Msa0540130:intron 55.0%
!! TGGTCTTGGTGATGTGGCAG+AGG + chr4_1:21719719-21719738 Msa0540130:intron 55.0%
!! TCTTGGTGATGTGGCAGAGG+TGG + chr4_1:21719722-21719741 Msa0540130:intron 55.0%
CTTGGGTCAGGGTACAAGCT+TGG - chr4_1:21719893-21719912 None:intergenic 55.0%
CAAGCTTGTACCCTGACCCA+AGG + chr4_1:21719891-21719910 Msa0540130:intron 55.0%
!! TGGGAAGGTACCTTGGGTCA+GGG - chr4_1:21719904-21719923 None:intergenic 55.0%
!! GAGGTTGTGGGAAGGTACCT+TGG - chr4_1:21719911-21719930 None:intergenic 55.0%
!! GAAGGTGTTTGCCAAGGCAG+AGG - chr4_1:21719933-21719952 None:intergenic 55.0%
! GGCCAAGGGAGCATACAAGA+AGG - chr4_1:21719951-21719970 None:intergenic 55.0%
GCGGAGTAGAGTATGGCCAA+GGG - chr4_1:21719965-21719984 None:intergenic 55.0%
TGCGGAGTAGAGTATGGCCA+AGG - chr4_1:21719966-21719985 None:intergenic 55.0%
CTGGAGGGACCATAGTACTG+CGG - chr4_1:21719984-21720003 None:intergenic 55.0%
!! TAAGGGGAGGCATCATGGAG+GGG - chr4_1:21720058-21720077 None:intergenic 55.0%
!! CATAAGGGGAGGCATCATGG+AGG - chr4_1:21720060-21720079 None:intergenic 55.0%
CTCCATGATGCCTCCCCTTA+TGG + chr4_1:21720058-21720077 Msa0540130:intron 55.0%
!! TGCCATAAGGGGAGGCATCA+TGG - chr4_1:21720063-21720082 None:intergenic 55.0%
TGAGGAGATGCCATAAGGGG+AGG - chr4_1:21720071-21720090 None:intergenic 55.0%
CTTGGGTTCCATGAGGGATG+GGG + chr4_1:21721017-21721036 Msa0540130:intron 55.0%
GACGCTTCACCTACACCCAA+TGG + chr4_1:21721123-21721142 Msa0540130:intron 55.0%
CGGGATAGTAACAAGGACCG+AGG + chr4_1:21721529-21721548 Msa0540130:three_prime_UTR 55.0%
CGTGCCTCATACACCCTTCA+AGG + chr4_1:21721696-21721715 Msa0540130:three_prime_UTR 55.0%
GGCAGCACACGTAACAGAGT+TGG + chr4_1:21721756-21721775 Msa0540130:three_prime_UTR 55.0%
GTGGTGCAGTCAAGCTGGTA+TGG - chr4_1:21721784-21721803 None:intergenic 55.0%
CAGCTTGACTGCACCACAGA+GGG + chr4_1:21721787-21721806 Msa0540130:three_prime_UTR 55.0%
! TGACAGTGGTGGAACCACAG+TGG + chr4_1:21721839-21721858 Msa0540130:three_prime_UTR 55.0%
GCGTTGCGATCGAAGAAGCT+TGG + chr4_1:21723540-21723559 Msa0540130:three_prime_UTR 55.0%
GCAGAAACATCTCCGGCGGT+TGG - chr4_1:21713636-21713655 None:intergenic 60.0%
AGCGGCGGCAGAAACATCTC+CGG - chr4_1:21713643-21713662 None:intergenic 60.0%
AACACCGTTCCGGAACGGCA+CGG - chr4_1:21713673-21713692 None:intergenic 60.0%
AAGAGCTGAAGGCAGCTCCG+AGG - chr4_1:21716043-21716062 None:intergenic 60.0%
GGTATGCAGCCAGACACCAC+AGG - chr4_1:21716445-21716464 None:intergenic 60.0%
ACGACCTGTGATGCTGCGAG+GGG + chr4_1:21717711-21717730 Msa0540130:intron 60.0%
TCTTCCCCTCGCAGCATCAC+AGG - chr4_1:21717718-21717737 None:intergenic 60.0%
TCAGGCCCTGGTGACTTGAG+AGG - chr4_1:21717781-21717800 None:intergenic 60.0%
GCTCTTGCATACGCAGGGTC+TGG + chr4_1:21718880-21718899 Msa0540130:intron 60.0%
ACGCGACCAAGACGACTCTC+CGG - chr4_1:21719516-21719535 None:intergenic 60.0%
CTTGGTCGCGTTCCTCCCTT+TGG + chr4_1:21719525-21719544 Msa0540130:intron 60.0%
GAGGGCTATGGTGAACGAGG+TGG + chr4_1:21719699-21719718 Msa0540130:intron 60.0%
!! GTGGGAAGGTACCTTGGGTC+AGG - chr4_1:21719905-21719924 None:intergenic 60.0%
AGGCAGAGGAGGTTGTGGGA+AGG - chr4_1:21719919-21719938 None:intergenic 60.0%
TCCCACAACCTCCTCTGCCT+TGG + chr4_1:21719919-21719938 Msa0540130:intron 60.0%
GCCAAGGCAGAGGAGGTTGT+GGG - chr4_1:21719923-21719942 None:intergenic 60.0%
TGCCAAGGCAGAGGAGGTTG+TGG - chr4_1:21719924-21719943 None:intergenic 60.0%
GGTGTTTGCCAAGGCAGAGG+AGG - chr4_1:21719930-21719949 None:intergenic 60.0%
! GAGGCATCATGGAGGGGTTG+AGG - chr4_1:21720052-21720071 None:intergenic 60.0%
CCTCTGTGGTGCAGTCAAGC+TGG - chr4_1:21721789-21721808 None:intergenic 60.0%
CCAGCTTGACTGCACCACAG+AGG + chr4_1:21721786-21721805 Msa0540130:three_prime_UTR 60.0%
GCACCACAGAGGGCGATTTG+AGG + chr4_1:21721797-21721816 Msa0540130:three_prime_UTR 60.0%
GCTCCTCAAATCGCCCTCTG+TGG - chr4_1:21721803-21721822 None:intergenic 60.0%
AAAGCCTGGCCACGTGACAG+TGG + chr4_1:21721825-21721844 Msa0540130:three_prime_UTR 60.0%
GTGGTTCCACCACTGTCACG+TGG - chr4_1:21721837-21721856 None:intergenic 60.0%
!! ACCTAGCTCTGGACCGAGCT+CGG - chr4_1:21723113-21723132 None:intergenic 60.0%
GGCGGCAGAAACATCTCCGG+CGG - chr4_1:21713640-21713659 None:intergenic 65.0%
GGTGGCTCGTCGCTTCTCTC+CGG + chr4_1:21714960-21714979 Msa0540130:CDS 65.0%
GGGGCAGTGGGTAGGCGTAT+TGG + chr4_1:21715612-21715631 Msa0540130:CDS 65.0%
!! ACTCAGGCGGTGGTGATGGG+TGG - chr4_1:21716110-21716129 None:intergenic 65.0%
GTTGGGAGCTCATCAGGCCC+TGG - chr4_1:21717793-21717812 None:intergenic 65.0%
GAGATCCGAAGGCGGGCATC+TGG + chr4_1:21718107-21718126 Msa0540130:intron 65.0%
TCCACCACTGTCACGTGGCC+AGG - chr4_1:21721832-21721851 None:intergenic 65.0%
GAACGGCACGGCGGCAGAAG+CGG - chr4_1:21713661-21713680 None:intergenic 70.0%
! CTTCTGCCGCCGTGCCGTTC+CGG + chr4_1:21713661-21713680 Msa0540130:CDS 70.0%
ACCGTTCCGGAACGGCACGG+CGG - chr4_1:21713670-21713689 None:intergenic 70.0%
GCCTGGCCACGTGACAGTGG+TGG + chr4_1:21721828-21721847 Msa0540130:three_prime_UTR 70.0%
TGCCCTGCTGCAGCCGAGCT+CGG + chr4_1:21723097-21723116 Msa0540130:three_prime_UTR 70.0%
GACCGAGCTCGGCTGCAGCA+GGG - chr4_1:21723102-21723121 None:intergenic 70.0%
GCCGAGCTCGGTCCAGAGCT+AGG + chr4_1:21723109-21723128 Msa0540130:three_prime_UTR 70.0%
! GCCGCCGTGCCGTTCCGGAA+CGG + chr4_1:21713666-21713685 Msa0540130:CDS 75.0%
GGACCGAGCTCGGCTGCAGC+AGG - chr4_1:21723103-21723122 None:intergenic 75.0%
! CGGCACGGCGGCAGAAGCGG+CGG - chr4_1:21713658-21713677 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 21713558 21723634 21713558 ID=Msa0540130;Name=Msa0540130
chr4_1 mRNA 21713558 21723634 21713558 ID=Msa0540130-mRNA-1;Parent=Msa0540130;Name=Msa0540130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.62|0.44|1|0.5|0.22|9|2578|690
chr4_1 exon 21713558 21713697 21713558 ID=Msa0540130-mRNA-1:exon:6175;Parent=Msa0540130-mRNA-1
chr4_1 exon 21713719 21713891 21713719 ID=Msa0540130-mRNA-1:exon:6176;Parent=Msa0540130-mRNA-1
chr4_1 exon 21714594 21714720 21714594 ID=Msa0540130-mRNA-1:exon:6177;Parent=Msa0540130-mRNA-1
chr4_1 exon 21714815 21715033 21714815 ID=Msa0540130-mRNA-1:exon:6178;Parent=Msa0540130-mRNA-1
chr4_1 exon 21715122 21715347 21715122 ID=Msa0540130-mRNA-1:exon:6179;Parent=Msa0540130-mRNA-1
chr4_1 exon 21715366 21715530 21715366 ID=Msa0540130-mRNA-1:exon:6180;Parent=Msa0540130-mRNA-1
chr4_1 exon 21715552 21715745 21715552 ID=Msa0540130-mRNA-1:exon:6181;Parent=Msa0540130-mRNA-1
chr4_1 exon 21715825 21716974 21715825 ID=Msa0540130-mRNA-1:exon:6182;Parent=Msa0540130-mRNA-1
chr4_1 exon 21721378 21723634 21721378 ID=Msa0540130-mRNA-1:exon:6183;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21713558 21713697 21713558 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21713719 21713891 21713719 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21714594 21714720 21714594 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21714815 21715033 21714815 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21715122 21715347 21715122 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21715366 21715530 21715366 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21715552 21715745 21715552 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 CDS 21715825 21716653 21715825 ID=Msa0540130-mRNA-1:cds;Parent=Msa0540130-mRNA-1
chr4_1 three_prime_UTR 21716654 21716974 21716654 ID=Msa0540130-mRNA-1:three_prime_utr;Parent=Msa0540130-mRNA-1
chr4_1 three_prime_UTR 21721378 21723634 21721378 ID=Msa0540130-mRNA-1:three_prime_utr;Parent=Msa0540130-mRNA-1
Gene Sequence

>Msa0540130

ATGGTTATGAACGAAAGACCCACTAAGCGAGTCAAAAGAAGAGTCACAGCCGATCTTTACGATTTTCTCTCATTCCCAACCGCCGGAGATGTTTCTGCCGCCGCTTCTGCCGCCGTGCCGTTCCGGAACGGTGTTTACCGGTCTGCTTTTCCTCCTGAGCTTTTTCCTTCTCTGATGACGTGGCAGATCTTGTTTCGTGTTGGAGAAGTTGGTGATGGAGGTGATGTTTCGTCTGGTTTGGTTACTCTTGACATTGTTGAAGAGGATGTTACGAGGTCGAGGACGATTTATTGTGATCAATGTCGTGTTGTTGGATGGAGTGCTCATCCTGTGTGTCGAAAGCGATATCACTTCATAATAAGGTCTGCAACTGATGCCAATGCAGCATATCAAAGACCTTGCACTAAATGTGGAACTCCTCTCCAATTATCTGAAGCAAGGTGTAACTCATGTAATTTTGACATTTCTGCTGATGATCTTGAGGAATGGTTGTATCATCAACTTGAGGAGAACAACACACATCTTCTGCATGGTGTTGTACATGCTAATGGTTATGGTCACTTGCTTACTCTTAATGGAAGAGAAGGTGGCTCGTCGCTTCTCTCCGGATCTGATATTATGGGTTTCTGGGATAGGCTTTGTGCTGCTATGTCTGTTAGGAAGGTTACTGTGATGGATTTGTCCAAGAAATTTGGACTGGATTATCGTTTGCTTCATGCAATTGCCAGAGGGCATTCATGGTATGGTAATTGGGGTTATGAATTTGGGACTGGCTGCTATGCTCTTACCGAAGATGCATACAAGATGGCGGTAGATAACTTGTCCAACATGCCCCTGTCCTCATTATCGTTCCAGGATCGAGGACCTCATAACCCTGTACAGTCTTCATTGGCTGAAACTGAACTTCGCACAATGAAAGATCTCTTCTCCTTTTTGTTGGAATTGGTTCAAAATTTTCGTAAGCCCAGGAGTGCAGAGACTGCTAAACTGCATGAACAGACCACTCCCTGTAATTTATTATGTTCATGGACGAGAAATGATGTCGAAGAGGTGTTGCTTGCATCAAGTGCCTGTAATGAGGCCAAATGGGTGACAAGGCAAACTCTTAAAGGGGCAGTGGGTAGGCGTATTGGATCCCCAGAGCTTCTTGACTTCGGTCTTAAGCACTTGCAAGGGAAATCAGTTGCAAATGGAATGGTAGTTTGTTCTCGATGCAATCCCACATCTAGTGCTATTGAATTCAGATTGGCTCATGTGCCTAATGGATTAAGCTCCATTGCAAGCCATCCTTCCAAAGAGCAAGTGATTTCTGATTTGACATTCTTATTTAATTCAATTGTTCACCCTGAAAAAATGATCAAATATAGACCAAAGATTAATAGGAAAACAGTGGCTGATTCAGCCAGAAAGCTTCTTGACTGTAAGCAATTTATGAAGGATTACAAAATCGAGCAAATGACCTCGGAGCTGCCTTCAGCTCTTAAGATCTGGTGTCACGTGAAGCTTTCTGACCATCCTAAAGAAGACCACCCATCACCACCGCCTGAGTTAATTGTGCTGCCTTTGAATGCTACTAATGTTGACCTTTTGAATGAAGTCACTGGTGTTTTTCAAGAAGTATATGCAATGTACAAGAAGTTTGTAGCCGTGAAACTTCTAGGATATGGTTTAACCCGAGATCGTGTGTATACCCTAAAATTCCTTCTGGGGTCAACCAATGGTACAGTTGAAGTTCAAGGAGAATGCCCAGCTAAAAATGGCTTAGCACGATTCCGAATGGAGAGAGGAACAGAAGAATGGAAGGTTGACTGCATTTGTGGTACTAAGGATGATGATGGAGAAAGGATGTTAGCATGTGATACCTGTGGTGTCTGGCTGCATACCAGATGTGCTGGAATTGACAGTGCTGATGGGATGCCTTCCAAGTTTGTATGTAAGAGATGTGTTAACTCAATCCGTGTGGGAGATAACCAGGCTTGTAAATTAAACACATATTGCAGAGATGAAGCGGTGGCTACATATTCTGCACCTGTTCGTTGTAATATAAAAAATGTGAATTTTGGTGTACGTTGA
Protein sequence

>Msa0540130

MVMNERPTKRVKRRVTADLYDFLSFPTAGDVSAAASAAVPFRNGVYRSAFPPELFPSLMTWQILFRVGEVGDGGDVSSGLVTLDIVEEDVTRSRTIYCDQCRVVGWSAHPVCRKRYHFIIRSATDANAAYQRPCTKCGTPLQLSEARCNSCNFDISADDLEEWLYHQLEENNTHLLHGVVHANGYGHLLTLNGREGGSSLLSGSDIMGFWDRLCAAMSVRKVTVMDLSKKFGLDYRLLHAIARGHSWYGNWGYEFGTGCYALTEDAYKMAVDNLSNMPLSSLSFQDRGPHNPVQSSLAETELRTMKDLFSFLLELVQNFRKPRSAETAKLHEQTTPCNLLCSWTRNDVEEVLLASSACNEAKWVTRQTLKGAVGRRIGSPELLDFGLKHLQGKSVANGMVVCSRCNPTSSAIEFRLAHVPNGLSSIASHPSKEQVISDLTFLFNSIVHPEKMIKYRPKINRKTVADSARKLLDCKQFMKDYKIEQMTSELPSALKIWCHVKLSDHPKEDHPSPPPELIVLPLNATNVDLLNEVTGVFQEVYAMYKKFVAVKLLGYGLTRDRVYTLKFLLGSTNGTVEVQGECPAKNGLARFRMERGTEEWKVDCICGTKDDDGERMLACDTCGVWLHTRCAGIDSADGMPSKFVCKRCVNSIRVGDNQACKLNTYCRDEAVATYSAPVRCNIKNVNFGVR*