AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0541760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0541760 MtrunA17_Chr8g0381261 100.000 428 0 0 1 428 1 428 0.0 895
Msa0541760 MtrunA17_Chr2g0278591 34.550 411 219 8 10 418 10 372 1.33e-74 238
Msa0541760 MtrunA17_Chr7g0223901 34.550 411 219 8 10 418 10 372 1.65e-72 232
Msa0541760 MtrunA17_Chr3g0129641 34.474 409 222 8 10 418 10 372 3.77e-72 231
Msa0541760 MtrunA17_Chr2g0328091 34.550 411 219 8 10 418 10 372 4.87e-72 231
Msa0541760 MtrunA17_Chr6g0448881 34.063 411 221 8 10 418 10 372 5.84e-72 231
Msa0541760 MtrunA17_Chr7g0258721 34.845 419 207 10 10 418 10 372 8.50e-72 230
Msa0541760 MtrunA17_Chr1g0175391 34.550 411 219 8 10 418 10 372 1.26e-71 230
Msa0541760 MtrunA17_Chr7g0224401 32.048 415 242 11 6 416 3 381 4.44e-60 200
Msa0541760 MtrunA17_Chr8g0361001 29.103 457 247 13 9 416 9 437 7.72e-48 169
Msa0541760 MtrunA17_Chr5g0427591 29.103 457 247 13 9 416 9 437 1.84e-47 168
Msa0541760 MtrunA17_Chr2g0305361 26.115 471 254 14 4 419 2 433 2.63e-36 138
Msa0541760 MtrunA17_Chr3g0089031 25.728 412 246 13 9 417 3 357 7.80e-25 104
Msa0541760 MtrunA17_Chr3g0111971 25.926 270 173 6 5 267 17 266 9.75e-15 76.6
Msa0541760 MtrunA17_Chr8g0336071 38.000 100 55 2 124 222 2 95 1.74e-14 68.9
Msa0541760 MtrunA17_Chr3g0080021 24.514 257 162 9 110 353 180 417 5.16e-12 67.4
Msa0541760 MtrunA17_Chr8g0369101 23.000 300 190 10 118 412 206 469 9.61e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0541760 AT1G13180.1 87.617 428 52 1 1 428 1 427 0.0 804
Msa0541760 AT2G42100.1 34.634 410 222 9 9 418 10 373 1.53e-73 235
Msa0541760 AT3G53750.1 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT3G53750.2 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT2G37620.1 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT2G37620.3 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT2G37620.2 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT2G37620.4 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541760 AT3G12110.1 34.307 411 220 8 10 418 10 372 3.81e-72 231
Msa0541760 AT5G09810.1 34.550 411 219 8 10 418 10 372 7.98e-72 231
Msa0541760 AT5G59370.2 34.606 419 208 10 10 418 10 372 2.70e-71 229
Msa0541760 AT5G59370.1 34.606 419 208 10 10 418 10 372 2.70e-71 229
Msa0541760 AT3G46520.2 34.606 419 208 10 10 418 10 372 4.28e-71 229
Msa0541760 AT3G46520.1 34.606 419 208 10 10 418 10 372 4.28e-71 229
Msa0541760 AT3G18780.2 33.741 409 225 8 10 418 10 372 5.51e-70 226
Msa0541760 AT3G18780.3 33.741 409 225 8 10 418 10 372 5.51e-70 226
Msa0541760 AT1G49240.1 33.741 409 225 8 10 418 10 372 7.35e-70 226
Msa0541760 AT2G42090.1 31.951 410 224 8 10 417 4 360 2.58e-66 216
Msa0541760 AT3G18780.1 33.504 391 214 8 10 400 10 354 2.87e-66 216
Msa0541760 AT2G42170.1 35.196 358 198 7 64 421 4 327 2.56e-63 207
Msa0541760 AT2G42170.3 35.196 358 198 7 64 421 4 327 2.56e-63 207
Msa0541760 AT3G27000.1 31.667 420 237 11 6 416 3 381 2.52e-60 201
Msa0541760 AT2G42170.4 34.421 337 187 7 64 400 4 306 1.07e-57 192
Msa0541760 AT2G42170.2 34.421 337 187 7 64 400 4 306 1.07e-57 192
Msa0541760 AT1G18450.1 29.451 455 245 12 9 416 9 434 2.74e-49 174
Msa0541760 AT3G33520.1 27.074 458 240 13 10 419 5 416 1.58e-35 136
Msa0541760 AT2G42170.5 31.579 247 143 5 175 421 9 229 1.87e-30 117
Msa0541760 AT3G60830.1 25.962 416 240 13 9 417 3 357 3.99e-25 106
Msa0541760 AT3G12380.1 25.979 281 173 9 10 278 22 279 3.16e-15 78.6
Msa0541760 AT3G12380.2 25.704 284 176 9 10 278 22 285 3.07e-14 75.5
Msa0541760 AT1G73910.1 30.216 139 92 2 9 147 9 142 2.33e-12 64.7
Msa0541760 AT1G73910.2 30.216 139 92 2 9 147 9 142 2.33e-12 64.7

Find 133 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGATCTTGATTTCTTTAT+TGG 0.095428 4_1:+25798479 Msa0541760:CDS
CAGATCCAGTAGAGAGATTT+AGG 0.218576 4_1:-25798005 None:intergenic
GAAGTTCTTCTAAAGGAAAT+TGG 0.220793 4_1:+25798429 Msa0541760:CDS
ACCACATGATGACTTGAAAT+TGG 0.221840 4_1:-25803346 None:intergenic
AAGTCATCATGTGGTTAATA+TGG 0.223085 4_1:+25803354 Msa0541760:three_prime_UTR
GGGATGCCATGGAGCGATTT+TGG 0.248634 4_1:+25798582 Msa0541760:CDS
TTGAGAAGGAAAGTATATTT+AGG 0.249294 4_1:+25797782 Msa0541760:five_prime_UTR
TTGTTGCAGGTATACGAAAA+TGG 0.249521 4_1:+25798328 Msa0541760:intron
GTTGCGGATGGTTATGTTAT+TGG 0.252532 4_1:+25799296 Msa0541760:CDS
GCAGCTGAAGCGCGCCTTAA+TGG 0.265252 4_1:+25801337 Msa0541760:CDS
GAATATGGAGCCCCAGTCTT+TGG 0.285326 4_1:-25800173 None:intergenic
GCTCCATATTCTTGTGATAT+TGG 0.295202 4_1:+25800185 Msa0541760:CDS
TCAACCTGACCATGCTTAAT+CGG 0.327099 4_1:-25798554 None:intergenic
ATTGGCTATGAACGCTTTCT+TGG 0.327285 4_1:+25800203 Msa0541760:CDS
CAAACCAAACTGCAAATCTT+TGG 0.333787 4_1:-25801938 None:intergenic
TATACGAAAATGGGCTTTGC+TGG 0.344789 4_1:+25798338 Msa0541760:CDS
TAGCCAATATCACAAGAATA+TGG 0.346527 4_1:-25800188 None:intergenic
CCTGAGAGTCGTGAGTATAC+TGG 0.349298 4_1:+25798683 Msa0541760:CDS
CTATCCAAAGATTTGCAGTT+TGG 0.357424 4_1:+25801934 Msa0541760:CDS
AAGGCAGAATACGAAGAATA+TGG 0.364575 4_1:+25803076 Msa0541760:CDS
CACAAGGAGATCATTATATA+AGG 0.369729 4_1:+25800889 Msa0541760:CDS
AGCATGGTCAGGTTGAGAAT+TGG 0.376747 4_1:+25798561 Msa0541760:CDS
GCCACTTCGAACGAGTCTTC+TGG 0.379121 4_1:-25799803 None:intergenic
TCAGCATAATGCTGGGGTTA+TGG 0.382607 4_1:+25798457 Msa0541760:CDS
TAATACATCCCCTTGAAAAC+AGG 0.382856 4_1:-25803121 None:intergenic
ATCAAATCAGTTCCTATTGC+GGG 0.386908 4_1:+25799326 Msa0541760:CDS
GCATGGTCAGGTTGAGAATT+GGG 0.389411 4_1:+25798562 Msa0541760:CDS
CAAAGATTTGCAGTTTGGTT+TGG 0.389429 4_1:+25801939 Msa0541760:CDS
TGACTTGAAATTGGCTTCCT+AGG 0.399595 4_1:-25803337 None:intergenic
TCTCCATTGCTTGATATACT+TGG 0.404016 4_1:-25800141 None:intergenic
TCTGTGCTTGCTCTCGCTGC+TGG 0.404421 4_1:+25798758 Msa0541760:CDS
CAGGTCCAGATGGTACTTAT+TGG 0.404569 4_1:+25803384 Msa0541760:three_prime_UTR
TGTTGCAGGTATACGAAAAT+GGG 0.405987 4_1:+25798329 Msa0541760:intron
AGGTATGTAATGCACACTTC+AGG 0.406668 4_1:+25803635 Msa0541760:three_prime_UTR
AGAACTGCAAGAATTAAAAC+TGG 0.407258 4_1:-25803313 None:intergenic
AGTCTCTCTTCCAATCTTCC+AGG 0.411218 4_1:+25803243 Msa0541760:three_prime_UTR
CTTCTGCTACCCTGGAAGAT+TGG 0.418930 4_1:-25803253 None:intergenic
AAAATGGTGAAAATCGGAAA+TGG 0.421533 4_1:-25798046 None:intergenic
TTTCAGAATATAGTGTTGTC+AGG 0.422885 4_1:+25801238 Msa0541760:intron
CATTGCTTGATATACTTGGC+TGG 0.423106 4_1:-25800137 None:intergenic
AATGATCTCCTTGTGTCAAT+TGG 0.425483 4_1:-25800881 None:intergenic
TTAGTGTTCAGCTTAGAGTT+TGG 0.425924 4_1:+25803458 Msa0541760:three_prime_UTR
TGCTGGCTACACTACGTCTA+AGG 0.427772 4_1:+25798775 Msa0541760:CDS
AAATATACTTTCCTTCTCAA+TGG 0.428046 4_1:-25797779 None:intergenic
GGCAGGAGATTAAATTCGTT+GGG 0.432100 4_1:+25803540 Msa0541760:three_prime_UTR
AGATTTGCAGTTTGGTTTGG+TGG 0.432383 4_1:+25801942 Msa0541760:CDS
CTGAGAGTCGTGAGTATACT+GGG 0.432628 4_1:+25798684 Msa0541760:CDS
ACAGGAGTCGTAGTTGATAT+CGG 0.443109 4_1:+25799248 Msa0541760:CDS
CTCTGCCTAAATCTCTCTAC+TGG 0.445890 4_1:+25798000 Msa0541760:five_prime_UTR
TAATTCTTGCAGTTCTTCCT+AGG 0.454993 4_1:+25803320 Msa0541760:three_prime_UTR
TCGTTAATCGCAACCACACT+AGG 0.456949 4_1:-25798386 None:intergenic
CATTGATTTGTGCAGGAAAG+AGG 0.458746 4_1:+25799767 Msa0541760:intron
TGGATTGCTCAGCATAATGC+TGG 0.465247 4_1:+25798449 Msa0541760:CDS
GTAACATCCTTTCCCGCAAT+AGG 0.466496 4_1:-25799338 None:intergenic
GTTGTCATCGACAATGGCTC+CGG 0.466593 4_1:+25798109 Msa0541760:CDS
ATGCACTTGTCTATTACAAC+TGG 0.466913 4_1:-25800848 None:intergenic
CACCTGCTCTGACATAGTTA+AGG 0.470644 4_1:+25799853 Msa0541760:CDS
ATCAGTTCCTATTGCGGGAA+AGG 0.476954 4_1:+25799331 Msa0541760:CDS
CCAGTATACTCACGACTCTC+AGG 0.480188 4_1:-25798683 None:intergenic
AGGCAGGAGATTAAATTCGT+TGG 0.485679 4_1:+25803539 Msa0541760:three_prime_UTR
CAACCTGACCATGCTTAATC+GGG 0.487813 4_1:-25798553 None:intergenic
GAGAGCAAGCACAGAATTCA+CGG 0.488016 4_1:-25798750 None:intergenic
CTGCAAATCTTTGGATAGGA+TGG 0.489552 4_1:-25801929 None:intergenic
ATCTACCAATAAGTACCATC+TGG 0.490428 4_1:-25803389 None:intergenic
AAAAGAAAATAATGATCCTC+AGG 0.490852 4_1:-25798638 None:intergenic
AGGCGCTGTCAACGGACTCT+CGG 0.495487 4_1:-25798663 None:intergenic
CAGTAGAGAGATTTAGGCAG+AGG 0.498285 4_1:-25797999 None:intergenic
ATAACATAACCATCCGCAAC+TGG 0.499019 4_1:-25799293 None:intergenic
TAACGTAAGATAGTGGTTGT+TGG 0.499157 4_1:-25797915 None:intergenic
GAGATTTAGGCAGAGGATCA+TGG 0.499731 4_1:-25797992 None:intergenic
TACCTACCCGCATTAGCTGC+TGG 0.504471 4_1:-25799370 None:intergenic
ACAGCAGGACGAGAAGCAGC+TGG 0.509967 4_1:-25798088 None:intergenic
TAAGTACCATCTGGACCTGC+TGG 0.510470 4_1:-25803380 None:intergenic
GAAGTCGCTGCTATATATCT+CGG 0.516026 4_1:-25800813 None:intergenic
TTTCGTCCAGCAGCTAATGC+GGG 0.520923 4_1:+25799364 Msa0541760:CDS
CTGAGTACATTGACCTCGAC+TGG 0.521211 4_1:-25801906 None:intergenic
GTCGTAGTTGATATCGGAGA+TGG 0.522188 4_1:+25799254 Msa0541760:CDS
AGGAGGATCAACAATGTTCA+AGG 0.526518 4_1:+25801258 Msa0541760:CDS
AGAGGCGTTAAACCAAAGAC+TGG 0.527817 4_1:+25800161 Msa0541760:CDS
CAATCGAGAAGTTCTTCTAA+AGG 0.532385 4_1:+25798422 Msa0541760:CDS
AAGTCGCTGCTATATATCTC+GGG 0.535811 4_1:-25800812 None:intergenic
TTACCCGATTAAGCATGGTC+AGG 0.538788 4_1:+25798550 Msa0541760:CDS
AGTGTATATTCAATTATTTG+CGG 0.546766 4_1:+25798609 Msa0541760:CDS
GGATTGCTCAGCATAATGCT+GGG 0.548668 4_1:+25798450 Msa0541760:CDS
CCTGCTGTTGTCATCGACAA+TGG 0.550059 4_1:+25798103 Msa0541760:CDS
CAAACTGCAAATCTTTGGAT+AGG 0.553466 4_1:-25801933 None:intergenic
TGGTTAATATGGTTGCCAGC+AGG 0.554493 4_1:+25803365 Msa0541760:three_prime_UTR
TTCACGGCAATGTAAAGTCC+AGG 0.555616 4_1:-25798734 None:intergenic
AGCGAGTTAACGTAAGATAG+TGG 0.556343 4_1:-25797922 None:intergenic
TCGTAGTTGATATCGGAGAT+GGG 0.559617 4_1:+25799255 Msa0541760:CDS
AGACTTTGATCGAAAGTGAA+AGG 0.560966 4_1:-25797945 None:intergenic
GGTTGAGAATTGGGATGCCA+TGG 0.561166 4_1:+25798571 Msa0541760:CDS
AAGAGAAGAGACTGCATCCA+TGG 0.563656 4_1:-25803166 None:intergenic
CGACTCTCAGGCGCTGTCAA+CGG 0.571890 4_1:-25798671 None:intergenic
AACCTTAACTATGTCAGAGC+AGG 0.574256 4_1:-25799855 None:intergenic
GAAAGAAAGATCCATTGAGA+AGG 0.576256 4_1:+25797768 Msa0541760:five_prime_UTR
GCCAATTTCAAGTCATCATG+TGG 0.582876 4_1:+25803345 Msa0541760:three_prime_UTR
TTGTCATCGACAATGGCTCC+GGG 0.583211 4_1:+25798110 Msa0541760:CDS
CTGCTGCCAAAATCGCTCCA+TGG 0.585282 4_1:-25798588 None:intergenic
GTCTCTCTTCCAATCTTCCA+GGG 0.587966 4_1:+25803244 Msa0541760:three_prime_UTR
TTATTTGCGGTGTGATCCTG+AGG 0.590272 4_1:+25798622 Msa0541760:CDS
CCATTGTCGATGACAACAGC+AGG 0.592798 4_1:-25798103 None:intergenic
CATCAAATCAGTTCCTATTG+CGG 0.593258 4_1:+25799325 Msa0541760:CDS
GAGGCGTTAAACCAAAGACT+GGG 0.595159 4_1:+25800162 Msa0541760:CDS
TACACATGTTGTACCAGTTG+CGG 0.599702 4_1:+25799280 Msa0541760:CDS
TAAGGCGCGCTTCAGCTGCA+AGG 0.600648 4_1:-25801333 None:intergenic
CTCACTTACCCGATTAAGCA+TGG 0.602719 4_1:+25798545 Msa0541760:CDS
AAGACTCGTTCGAAGTGGCT+CGG 0.603015 4_1:+25799807 Msa0541760:CDS
TTTGAGATAGAGAAATGCTA+TGG 0.603557 4_1:+25803669 Msa0541760:three_prime_UTR
AAAGATGAATTAGCTGACCA+TGG 0.606344 4_1:+25803149 Msa0541760:three_prime_UTR
TGGTTGCCAGCAGGTCCAGA+TGG 0.609507 4_1:+25803374 Msa0541760:three_prime_UTR
CAGCAGGACGAGAAGCAGCT+GGG 0.616158 4_1:-25798087 None:intergenic
CAGCCAAGTATATCAAGCAA+TGG 0.617742 4_1:+25800138 Msa0541760:CDS
TGAACGCTTTCTTGGCCCTG+AGG 0.617976 4_1:+25800211 Msa0541760:CDS
TTGTCTATTACAACTGGCAA+AGG 0.619919 4_1:-25800842 None:intergenic
ACCAGAAGACTCGTTCGAAG+TGG 0.622925 4_1:+25799802 Msa0541760:CDS
CGAAGTGGCTCGGAAAGTGA+AGG 0.622978 4_1:+25799817 Msa0541760:CDS
CCTTGAAAACAGGATTTGTG+CGG 0.635643 4_1:-25803111 None:intergenic
CATGTTGTACCAGTTGCGGA+TGG 0.639900 4_1:+25799284 Msa0541760:CDS
TATTACAACTGGCAAAGGAG+TGG 0.641692 4_1:-25800837 None:intergenic
AAAATGTTGGCTGAGCTGAA+TGG 0.641859 4_1:+25803429 Msa0541760:three_prime_UTR
TCCACAGTCACATCCAGTCG+AGG 0.643643 4_1:+25801893 Msa0541760:intron
CGTAGTTGATATCGGAGATG+GGG 0.648015 4_1:+25799256 Msa0541760:CDS
CAGAATATAGTGTTGTCAGG+AGG 0.650438 4_1:+25801241 Msa0541760:intron
AAGTATATCAAGCAATGGAG+AGG 0.653283 4_1:+25800143 Msa0541760:CDS
TGTGCAGGCTTGTCATACAA+AGG 0.662053 4_1:+25803057 Msa0541760:intron
GATTGCTCAGCATAATGCTG+GGG 0.663436 4_1:+25798451 Msa0541760:CDS
ACTTCGAACGAGTCTTCTGG+TGG 0.687169 4_1:-25799800 None:intergenic
AGTCTGCGCCAATTGACACA+AGG 0.690930 4_1:+25800873 Msa0541760:CDS
ACACTAGGAACAATAAAACA+AGG 0.696455 4_1:-25798371 None:intergenic
AGAGACTGTGAGATGAAACG+AGG 0.732235 4_1:-25803227 None:intergenic
AGGCGTTAAACCAAAGACTG+GGG 0.735801 4_1:+25800163 Msa0541760:CDS
TGAGAGTCGTGAGTATACTG+GGG 0.741187 4_1:+25798685 Msa0541760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAACAATATTAAAATA+TGG - chr4_1:25802597-25802616 None:intergenic 10.0%
!! GATATAAAAAAAAGAAATTA+TGG + chr4_1:25803189-25803208 Msa0541760:three_prime_UTR 10.0%
!! CATTAGAAATATCAAAAAAA+TGG - chr4_1:25798065-25798084 None:intergenic 15.0%
!!! CATTTTTTTGATATTTCTAA+TGG + chr4_1:25798063-25798082 Msa0541760:exon 15.0%
!!! AGATTTTGTATTATTATGAT+AGG + chr4_1:25798821-25798840 Msa0541760:intron 15.0%
!!! TATTGTTTTTTGAAGTTTTT+AGG + chr4_1:25799195-25799214 Msa0541760:intron 15.0%
!!! TAACATTCTAATTTTATACA+AGG - chr4_1:25799398-25799417 None:intergenic 15.0%
!!! ATTTCTTTTTTAGTGAATTA+AGG + chr4_1:25800023-25800042 Msa0541760:intron 15.0%
!!! TTTCTTTTTTAGTGAATTAA+GGG + chr4_1:25800024-25800043 Msa0541760:intron 15.0%
!!! ATATAATTACATACAGATTT+TGG + chr4_1:25800714-25800733 Msa0541760:intron 15.0%
!! TTGAAATATTGAAATAAAGT+TGG - chr4_1:25800974-25800993 None:intergenic 15.0%
!! AAAAAAAAGAAAAAAAAGGA+TGG - chr4_1:25802797-25802816 None:intergenic 15.0%
!! ATAGTTGAAAACAAAAACTA+TGG + chr4_1:25797868-25797887 Msa0541760:five_prime_UTR 20.0%
!! TAGTTGAAAACAAAAACTAT+GGG + chr4_1:25797869-25797888 Msa0541760:five_prime_UTR 20.0%
!! ATCAAAAAAATGGTGAAAAT+CGG - chr4_1:25798055-25798074 None:intergenic 20.0%
!!! AGTTTTTTTTATTGGAATTG+TGG + chr4_1:25798244-25798263 Msa0541760:intron 20.0%
!! AGTGTATATTCAATTATTTG+CGG + chr4_1:25798609-25798628 Msa0541760:CDS 20.0%
!!! TTGTATTATGTTGATAGAAT+TGG + chr4_1:25798901-25798920 Msa0541760:intron 20.0%
!! TTGAATATAGAATGTTATGT+TGG + chr4_1:25799141-25799160 Msa0541760:intron 20.0%
!!! AGATTTTAAAATTAAGGAAC+AGG - chr4_1:25799435-25799454 None:intergenic 20.0%
!!! AGTCACAGATTTTAAAATTA+AGG - chr4_1:25799441-25799460 None:intergenic 20.0%
!!! ATGAATAAGATCTAAAATCA+TGG - chr4_1:25799648-25799667 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr4_1:25801708-25801727 None:intergenic 20.0%
!!! TTTTTTCTTTTACCTTTTTC+TGG + chr4_1:25802005-25802024 Msa0541760:intron 20.0%
!!! TTTTTCTTTTACCTTTTTCT+GGG + chr4_1:25802006-25802025 Msa0541760:intron 20.0%
!! AATCGTAAATTCATTTAATG+TGG - chr4_1:25802292-25802311 None:intergenic 20.0%
!!! ATTAACTCCTTAATTTTACA+CGG - chr4_1:25802388-25802407 None:intergenic 20.0%
!!! TGACAATTTAATCTCTAAAA+AGG + chr4_1:25802438-25802457 Msa0541760:intron 20.0%
!!! AATTTAGTCTTTCAAATTGT+AGG - chr4_1:25802640-25802659 None:intergenic 20.0%
!! TAATGTGTGTTTATAATTTC+TGG + chr4_1:25803027-25803046 Msa0541760:intron 20.0%
!! AAAAAAAAGAAATTATGGTC+TGG + chr4_1:25803194-25803213 Msa0541760:three_prime_UTR 20.0%
!!! TTTGATTTTTGACAAAATGT+TGG + chr4_1:25803416-25803435 Msa0541760:three_prime_UTR 20.0%
!!! ATAACATTAAGTACTTTTCT+AGG + chr4_1:25803519-25803538 Msa0541760:three_prime_UTR 20.0%
!!! CACATAATTTTTGCATTTTT+AGG + chr4_1:25803615-25803634 Msa0541760:three_prime_UTR 20.0%
! AAATATACTTTCCTTCTCAA+TGG - chr4_1:25797782-25797801 None:intergenic 25.0%
!! TTGAGAAGGAAAGTATATTT+AGG + chr4_1:25797782-25797801 Msa0541760:five_prime_UTR 25.0%
! AAAAGAAAGTAAACCCAATT+GGG - chr4_1:25798163-25798182 None:intergenic 25.0%
! AAAAAGAAAGTAAACCCAAT+TGG - chr4_1:25798164-25798183 None:intergenic 25.0%
! AACTAAAAAATATCCCATTC+AGG - chr4_1:25798228-25798247 None:intergenic 25.0%
!!! TAAAAATGTGTTTTTGTTGC+AGG + chr4_1:25798315-25798334 Msa0541760:intron 25.0%
! AAAAGAAAATAATGATCCTC+AGG - chr4_1:25798641-25798660 None:intergenic 25.0%
!! TGTTGATAGAATTGGAATAA+TGG + chr4_1:25798909-25798928 Msa0541760:intron 25.0%
!! ATAGAATTGGAATAATGGAA+TGG + chr4_1:25798914-25798933 Msa0541760:intron 25.0%
!!! GTTTTATTTATTCAAACCTG+TGG + chr4_1:25798961-25798980 Msa0541760:intron 25.0%
! ATTCTAAACACAAAATGCTT+TGG + chr4_1:25799020-25799039 Msa0541760:intron 25.0%
!! TGTATGCTTGTTAACATTAA+AGG + chr4_1:25799460-25799479 Msa0541760:intron 25.0%
! AGAATTGAATATTACAACCT+TGG - chr4_1:25799701-25799720 None:intergenic 25.0%
! TTCTTTGGCATAATCATTTA+AGG + chr4_1:25799900-25799919 Msa0541760:intron 25.0%
! ATAATCATTTAAGGAGTTTG+TGG + chr4_1:25799909-25799928 Msa0541760:intron 25.0%
! GACATTGAACAAAAAATGTT+CGG - chr4_1:25799978-25799997 None:intergenic 25.0%
! GTTTATTCATGACAGAAAAT+GGG - chr4_1:25800361-25800380 None:intergenic 25.0%
! TGTTTATTCATGACAGAAAA+TGG - chr4_1:25800362-25800381 None:intergenic 25.0%
! CTTAAAACCAGAAGATATAA+GGG - chr4_1:25800438-25800457 None:intergenic 25.0%
!!! ATTTTGTTGCTTTTCCTTTT+TGG + chr4_1:25800464-25800483 Msa0541760:intron 25.0%
!!! TTTTGTTGCTTTTCCTTTTT+GGG + chr4_1:25800465-25800484 Msa0541760:intron 25.0%
! ATGATTTCTTTAGTAGATGA+AGG - chr4_1:25800658-25800677 None:intergenic 25.0%
!!! ATTTTGGTCATTGAATCAAT+AGG + chr4_1:25800730-25800749 Msa0541760:intron 25.0%
! AACTTGTAAATCTCAATCTT+TGG + chr4_1:25801065-25801084 Msa0541760:intron 25.0%
! AGATCATAAATCAAAGATCT+GGG - chr4_1:25801142-25801161 None:intergenic 25.0%
! AAGATCATAAATCAAAGATC+TGG - chr4_1:25801143-25801162 None:intergenic 25.0%
! ATCATTAAGAACATGTAAAG+TGG - chr4_1:25801182-25801201 None:intergenic 25.0%
! TGAAATGAAAAGGACAAAAT+GGG - chr4_1:25801223-25801242 None:intergenic 25.0%
!!! CACTATATTCTGAAATGAAA+AGG - chr4_1:25801233-25801252 None:intergenic 25.0%
! ATGAAATAACAATGTGTCAA+TGG - chr4_1:25801475-25801494 None:intergenic 25.0%
!! CCTCATTATTTAAAATCATG+TGG - chr4_1:25801524-25801543 None:intergenic 25.0%
!! CCACATGATTTTAAATAATG+AGG + chr4_1:25801521-25801540 Msa0541760:intron 25.0%
!!! ATATGTTTATTGGTTTGATC+TGG + chr4_1:25801837-25801856 Msa0541760:intron 25.0%
!!! CTTTTTTTCTTTTCACTTCT+TGG + chr4_1:25801868-25801887 Msa0541760:intron 25.0%
!!! ATCAACACCTGAATTTTTTA+CGG + chr4_1:25801977-25801996 Msa0541760:CDS 25.0%
!! AATAATAATCTCTTTTGACC+TGG + chr4_1:25802062-25802081 Msa0541760:intron 25.0%
! ACTTATGATGTTGGATAAAA+CGG + chr4_1:25802101-25802120 Msa0541760:intron 25.0%
! AAGTAAAAAAACTACATCCA+GGG - chr4_1:25802224-25802243 None:intergenic 25.0%
! AAAGTAAAAAAACTACATCC+AGG - chr4_1:25802225-25802244 None:intergenic 25.0%
! TTTGCTTATCATTTGTGATT+TGG + chr4_1:25802247-25802266 Msa0541760:intron 25.0%
! TTGCTTATCATTTGTGATTT+GGG + chr4_1:25802248-25802267 Msa0541760:intron 25.0%
! ATGCATGTTAACAAACTAAA+TGG + chr4_1:25802314-25802333 Msa0541760:intron 25.0%
!! AATATCATGTTTTCAAACCA+AGG - chr4_1:25802361-25802380 None:intergenic 25.0%
!! TTGGTTTGAAAACATGATAT+TGG + chr4_1:25802360-25802379 Msa0541760:intron 25.0%
! TATAATCCTTCAAATTGTCT+TGG - chr4_1:25802524-25802543 None:intergenic 25.0%
!! ATTGACTCAAAAGACTAATT+TGG + chr4_1:25802543-25802562 Msa0541760:intron 25.0%
!! GATTGATGATTTGAATTTCT+TGG + chr4_1:25802570-25802589 Msa0541760:intron 25.0%
! CACTCAAAATTTAGATAACT+AGG + chr4_1:25802667-25802686 Msa0541760:intron 25.0%
!!! TGGGAGAAAGTTTTTTTTTT+AGG - chr4_1:25802728-25802747 None:intergenic 25.0%
! TAAAAAAAAAACTTTCTCCC+AGG + chr4_1:25802727-25802746 Msa0541760:intron 25.0%
!!! TGCATTTTTTCATTTGTTGT+TGG + chr4_1:25803489-25803508 Msa0541760:three_prime_UTR 25.0%
!!! GCATTTTTTCATTTGTTGTT+GGG + chr4_1:25803490-25803509 Msa0541760:three_prime_UTR 25.0%
AAAATGGTGAAAATCGGAAA+TGG - chr4_1:25798049-25798068 None:intergenic 30.0%
AATAGAAATGGAGTGAGAAA+AGG - chr4_1:25798138-25798157 None:intergenic 30.0%
TCCATTTCTATTTACCCAAT+TGG + chr4_1:25798146-25798165 Msa0541760:intron 30.0%
CCATTTCTATTTACCCAATT+GGG + chr4_1:25798147-25798166 Msa0541760:intron 30.0%
TGATATTGAGATATCCGAAT+TGG + chr4_1:25798276-25798295 Msa0541760:intron 30.0%
GATATTGAGATATCCGAATT+GGG + chr4_1:25798277-25798296 Msa0541760:intron 30.0%
AATTCAACACAAACCCAATT+CGG - chr4_1:25798293-25798312 None:intergenic 30.0%
ACACTAGGAACAATAAAACA+AGG - chr4_1:25798374-25798393 None:intergenic 30.0%
!! TTGTTTTATTGTTCCTAGTG+TGG + chr4_1:25798373-25798392 Msa0541760:CDS 30.0%
! GAAGTTCTTCTAAAGGAAAT+TGG + chr4_1:25798429-25798448 Msa0541760:CDS 30.0%
GCTGATCTTGATTTCTTTAT+TGG + chr4_1:25798479-25798498 Msa0541760:CDS 30.0%
TATCAACATAATACAACAGC+CGG - chr4_1:25798897-25798916 None:intergenic 30.0%
! TTGGAATAATGGAATGGAAT+TGG + chr4_1:25798920-25798939 Msa0541760:intron 30.0%
! AATAATGGAATGGAATTGGA+TGG + chr4_1:25798924-25798943 Msa0541760:intron 30.0%
!!! AATTGGATGGTTAGTTTTGA+AGG + chr4_1:25798937-25798956 Msa0541760:intron 30.0%
!!! ATTGGATGGTTAGTTTTGAA+GGG + chr4_1:25798938-25798957 Msa0541760:intron 30.0%
TTGTACAAAAGATTTACCAC+AGG - chr4_1:25798980-25798999 None:intergenic 30.0%
TTTGTAATATTACAAGCGCA+TGG + chr4_1:25799102-25799121 Msa0541760:intron 30.0%
TTGTAATATTACAAGCGCAT+GGG + chr4_1:25799103-25799122 Msa0541760:intron 30.0%
TAATGCTAATCATGGATGAA+TGG + chr4_1:25799544-25799563 Msa0541760:intron 30.0%
AATGCTAATCATGGATGAAT+GGG + chr4_1:25799545-25799564 Msa0541760:intron 30.0%
! CGTTTTGCCATATTAAGTTT+TGG + chr4_1:25799669-25799688 Msa0541760:intron 30.0%
GTCAGTACCAAAACTTAATA+TGG - chr4_1:25799679-25799698 None:intergenic 30.0%
!! ATGTTTACATTGATTTGTGC+AGG + chr4_1:25799760-25799779 Msa0541760:intron 30.0%
GTTCACTGCTTATATTTCTT+TGG + chr4_1:25799885-25799904 Msa0541760:intron 30.0%
AAGCAAAGAAACAAAGCTAT+TGG - chr4_1:25799945-25799964 None:intergenic 30.0%
ATAATTGCTCAATTTCTCTC+AGG + chr4_1:25800091-25800110 Msa0541760:intron 30.0%
TAGCCAATATCACAAGAATA+TGG - chr4_1:25800191-25800210 None:intergenic 30.0%
! GATGATAGAGAAAGTATAAC+GGG - chr4_1:25800249-25800268 None:intergenic 30.0%
! GGATGATAGAGAAAGTATAA+CGG - chr4_1:25800250-25800269 None:intergenic 30.0%
TGAATAAACACCTTTCTTAG+TGG + chr4_1:25800372-25800391 Msa0541760:intron 30.0%
GAATAAACACCTTTCTTAGT+GGG + chr4_1:25800373-25800392 Msa0541760:intron 30.0%
AATAAACACCTTTCTTAGTG+GGG + chr4_1:25800374-25800393 Msa0541760:intron 30.0%
CCTTAAAACCAGAAGATATA+AGG - chr4_1:25800439-25800458 None:intergenic 30.0%
!!! CCTTATATCTTCTGGTTTTA+AGG + chr4_1:25800436-25800455 Msa0541760:intron 30.0%
!! AAATCGTTGATAACCCAAAA+AGG - chr4_1:25800481-25800500 None:intergenic 30.0%
AACGATTTCTAAATCCTGAT+AGG + chr4_1:25800493-25800512 Msa0541760:intron 30.0%
ACGATTTCTAAATCCTGATA+GGG + chr4_1:25800494-25800513 Msa0541760:intron 30.0%
ACAGAGATCAATAGCTAATT+GGG - chr4_1:25800619-25800638 None:intergenic 30.0%
TACAGAGATCAATAGCTAAT+TGG - chr4_1:25800620-25800639 None:intergenic 30.0%
TAGATGAAGGAACAAACTTA+AGG - chr4_1:25800645-25800664 None:intergenic 30.0%
CATGAAAATGTAGTATTCCT+TGG + chr4_1:25800675-25800694 Msa0541760:intron 30.0%
TAACTTCAACAATTACACCA+AGG - chr4_1:25800695-25800714 None:intergenic 30.0%
AAAGTAATAGAGTAAACCCA+CGG - chr4_1:25800775-25800794 None:intergenic 30.0%
!! GTTTACTCTATTACTTTTGC+AGG + chr4_1:25800778-25800797 Msa0541760:intron 30.0%
CACAAGGAGATCATTATATA+AGG + chr4_1:25800889-25800908 Msa0541760:CDS 30.0%
TCACCAATTAAATTGAGATG+AGG - chr4_1:25800922-25800941 None:intergenic 30.0%
TTACAAGTTCTCGAACATTA+AGG - chr4_1:25801054-25801073 None:intergenic 30.0%
GATCATAAATCAAAGATCTG+GGG - chr4_1:25801141-25801160 None:intergenic 30.0%
TTAAGAACATGTAAAGTGGA+GGG - chr4_1:25801178-25801197 None:intergenic 30.0%
ATTAAGAACATGTAAAGTGG+AGG - chr4_1:25801179-25801198 None:intergenic 30.0%
CTGAAATGAAAAGGACAAAA+TGG - chr4_1:25801224-25801243 None:intergenic 30.0%
TTTCAGAATATAGTGTTGTC+AGG + chr4_1:25801238-25801257 Msa0541760:intron 30.0%
!! TCACTTTTATCTCTCCATTA+AGG - chr4_1:25801354-25801373 None:intergenic 30.0%
TTTGCAATAGCTAAGCTATA+TGG + chr4_1:25801434-25801453 Msa0541760:intron 30.0%
! AATAATGAGGTGTTAGTTGT+TGG + chr4_1:25801534-25801553 Msa0541760:intron 30.0%
TTTCATAAACTATGAAGCAC+TGG - chr4_1:25801805-25801824 None:intergenic 30.0%
AAGCATACCGTAAAAAATTC+AGG - chr4_1:25801987-25802006 None:intergenic 30.0%
!! TATTCTGAGACTTATGATGT+TGG + chr4_1:25802092-25802111 Msa0541760:intron 30.0%
! TAAAACGGTTCTTTAGGTTT+AGG + chr4_1:25802116-25802135 Msa0541760:intron 30.0%
AACTAAATGGTTACGACTTA+TGG + chr4_1:25802327-25802346 Msa0541760:intron 30.0%
ATTGGATCCGTGTAAAATTA+AGG + chr4_1:25802378-25802397 Msa0541760:intron 30.0%
CACAAATTTAGTCTCTGTAA+TGG + chr4_1:25802408-25802427 Msa0541760:intron 30.0%
AATTTAGTCTCTGTAATGGT+AGG + chr4_1:25802412-25802431 Msa0541760:intron 30.0%
ATTTAGTCTCTGTAATGGTA+GGG + chr4_1:25802413-25802432 Msa0541760:intron 30.0%
TTAGGACATCTTAATCTACA+AGG - chr4_1:25802710-25802729 None:intergenic 30.0%
AAGAAAAAAAAGGATGGCAA+CGG - chr4_1:25802791-25802810 None:intergenic 30.0%
AGAACTGCAAGAATTAAAAC+TGG - chr4_1:25803316-25803335 None:intergenic 30.0%
AAGTCATCATGTGGTTAATA+TGG + chr4_1:25803354-25803373 Msa0541760:three_prime_UTR 30.0%
! TTTGAGATAGAGAAATGCTA+TGG + chr4_1:25803669-25803688 Msa0541760:three_prime_UTR 30.0%
GAAAGAAAGATCCATTGAGA+AGG + chr4_1:25797768-25797787 Msa0541760:five_prime_UTR 35.0%
! TAACGTAAGATAGTGGTTGT+TGG - chr4_1:25797918-25797937 None:intergenic 35.0%
AGACTTTGATCGAAAGTGAA+AGG - chr4_1:25797948-25797967 None:intergenic 35.0%
CCCAATTGGGTAAATAGAAA+TGG - chr4_1:25798150-25798169 None:intergenic 35.0%
! TGTTTGTTGAAATGCCTGAA+TGG + chr4_1:25798211-25798230 Msa0541760:intron 35.0%
! GTTTGTTGAAATGCCTGAAT+GGG + chr4_1:25798212-25798231 Msa0541760:intron 35.0%
TTGTTGCAGGTATACGAAAA+TGG + chr4_1:25798328-25798347 Msa0541760:intron 35.0%
TGTTGCAGGTATACGAAAAT+GGG + chr4_1:25798329-25798348 Msa0541760:intron 35.0%
CAATCGAGAAGTTCTTCTAA+AGG + chr4_1:25798422-25798441 Msa0541760:CDS 35.0%
!! TTTGAGACTTTTAATGTGCC+TGG + chr4_1:25798716-25798735 Msa0541760:CDS 35.0%
GATTTATGAAACTTGCCTAG+CGG + chr4_1:25798861-25798880 Msa0541760:intron 35.0%
!!! TTGGATGGTTAGTTTTGAAG+GGG + chr4_1:25798939-25798958 Msa0541760:intron 35.0%
TCAACAGAGTGATTCACTTT+CGG - chr4_1:25799061-25799080 None:intergenic 35.0%
!! GTTATGTTGGCTTAGCATAT+TGG + chr4_1:25799154-25799173 Msa0541760:intron 35.0%
!! TCTTTTTAGTGTGAGATGAC+AGG + chr4_1:25799230-25799249 Msa0541760:intron 35.0%
CATCAAATCAGTTCCTATTG+CGG + chr4_1:25799325-25799344 Msa0541760:CDS 35.0%
ATCAAATCAGTTCCTATTGC+GGG + chr4_1:25799326-25799345 Msa0541760:CDS 35.0%
AATTAAGGAACAGGTAGTAG+TGG - chr4_1:25799426-25799445 None:intergenic 35.0%
GATTAGCATTAACCAATGCA+TGG - chr4_1:25799535-25799554 None:intergenic 35.0%
!! GCATTGGTTAATGCTAATCA+TGG + chr4_1:25799536-25799555 Msa0541760:intron 35.0%
ATGCTAATCATGGATGAATG+GGG + chr4_1:25799546-25799565 Msa0541760:intron 35.0%
!!! TTAAGTTTTGGTACTGACCA+AGG + chr4_1:25799681-25799700 Msa0541760:intron 35.0%
AGGGACGTAAAGTTATCTAT+TGG + chr4_1:25800043-25800062 Msa0541760:intron 35.0%
TCTCCATTGCTTGATATACT+TGG - chr4_1:25800144-25800163 None:intergenic 35.0%
AAGTATATCAAGCAATGGAG+AGG + chr4_1:25800143-25800162 Msa0541760:CDS 35.0%
GCTCCATATTCTTGTGATAT+TGG + chr4_1:25800185-25800204 Msa0541760:CDS 35.0%
TATTCATGACAGAAAATGGG+AGG - chr4_1:25800358-25800377 None:intergenic 35.0%
GGGGATTATCTGTGAAAAAA+TGG + chr4_1:25800393-25800412 Msa0541760:intron 35.0%
CGATTTCTAAATCCTGATAG+GGG + chr4_1:25800495-25800514 Msa0541760:intron 35.0%
GGTCATTGAATCAATAGGAT+TGG + chr4_1:25800735-25800754 Msa0541760:intron 35.0%
AAGTAATAGAGTAAACCCAC+GGG - chr4_1:25800774-25800793 None:intergenic 35.0%
TTGTCTATTACAACTGGCAA+AGG - chr4_1:25800845-25800864 None:intergenic 35.0%
ATGCACTTGTCTATTACAAC+TGG - chr4_1:25800851-25800870 None:intergenic 35.0%
AATGATCTCCTTGTGTCAAT+TGG - chr4_1:25800884-25800903 None:intergenic 35.0%
GCACCTCATCTCAATTTAAT+TGG + chr4_1:25800916-25800935 Msa0541760:intron 35.0%
! CAATGTTCAAGGATTTTCAC+AGG + chr4_1:25801269-25801288 Msa0541760:CDS 35.0%
TAGCTTAGCTATTGCAAACA+AGG - chr4_1:25801432-25801451 None:intergenic 35.0%
! GTGTTAGTTGTTGGTTGATT+CGG + chr4_1:25801543-25801562 Msa0541760:intron 35.0%
TTTGGAAGAAGTTCTCACAT+TGG + chr4_1:25801627-25801646 Msa0541760:intron 35.0%
TGTTTGTGAACTATGAAGCA+CGG + chr4_1:25801653-25801672 Msa0541760:intron 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr4_1:25801702-25801721 None:intergenic 35.0%
TGTAATTCTATGTGTCGTGT+CGG + chr4_1:25801738-25801757 Msa0541760:intron 35.0%
CAAACTGCAAATCTTTGGAT+AGG - chr4_1:25801936-25801955 None:intergenic 35.0%
CTATCCAAAGATTTGCAGTT+TGG + chr4_1:25801934-25801953 Msa0541760:CDS 35.0%
CAAACCAAACTGCAAATCTT+TGG - chr4_1:25801941-25801960 None:intergenic 35.0%
CAAAGATTTGCAGTTTGGTT+TGG + chr4_1:25801939-25801958 Msa0541760:CDS 35.0%
ACAAGTCATAACCCAGAAAA+AGG - chr4_1:25802020-25802039 None:intergenic 35.0%
GTTGGATAAAACGGTTCTTT+AGG + chr4_1:25802110-25802129 Msa0541760:intron 35.0%
GACTTATGGTATTGTTTCCT+TGG + chr4_1:25802341-25802360 Msa0541760:intron 35.0%
! TTTTCTCTGTGTTAACTCTC+TGG + chr4_1:25802821-25802840 Msa0541760:intron 35.0%
! TGTTAACTCTCTGGTTCATA+GGG + chr4_1:25802830-25802849 Msa0541760:intron 35.0%
AAGGCAGAATACGAAGAATA+TGG + chr4_1:25803076-25803095 Msa0541760:CDS 35.0%
TAATACATCCCCTTGAAAAC+AGG - chr4_1:25803124-25803143 None:intergenic 35.0%
AAAGATGAATTAGCTGACCA+TGG + chr4_1:25803149-25803168 Msa0541760:three_prime_UTR 35.0%
TAATTCTTGCAGTTCTTCCT+AGG + chr4_1:25803320-25803339 Msa0541760:three_prime_UTR 35.0%
ACCACATGATGACTTGAAAT+TGG - chr4_1:25803349-25803368 None:intergenic 35.0%
ATCTACCAATAAGTACCATC+TGG - chr4_1:25803392-25803411 None:intergenic 35.0%
TTAGTGTTCAGCTTAGAGTT+TGG + chr4_1:25803458-25803477 Msa0541760:three_prime_UTR 35.0%
! CATTAAGTACTTTTCTAGGC+AGG + chr4_1:25803523-25803542 Msa0541760:three_prime_UTR 35.0%
AGCGAGTTAACGTAAGATAG+TGG - chr4_1:25797925-25797944 None:intergenic 40.0%
CAGATCCAGTAGAGAGATTT+AGG - chr4_1:25798008-25798027 None:intergenic 40.0%
CAGGCATTTCAACAAACACA+TGG - chr4_1:25798209-25798228 None:intergenic 40.0%
! TATACGAAAATGGGCTTTGC+TGG + chr4_1:25798338-25798357 Msa0541760:CDS 40.0%
TCAACCTGACCATGCTTAAT+CGG - chr4_1:25798557-25798576 None:intergenic 40.0%
TCACTCTGTTGAGTAAGAAC+TGG + chr4_1:25799069-25799088 Msa0541760:intron 40.0%
TGTTGAGTAAGAACTGGTTG+CGG + chr4_1:25799075-25799094 Msa0541760:intron 40.0%
! ACAGGAGTCGTAGTTGATAT+CGG + chr4_1:25799248-25799267 Msa0541760:CDS 40.0%
! TCGTAGTTGATATCGGAGAT+GGG + chr4_1:25799255-25799274 Msa0541760:CDS 40.0%
TACACATGTTGTACCAGTTG+CGG + chr4_1:25799280-25799299 Msa0541760:CDS 40.0%
ATAACATAACCATCCGCAAC+TGG - chr4_1:25799296-25799315 None:intergenic 40.0%
GTTGCGGATGGTTATGTTAT+TGG + chr4_1:25799296-25799315 Msa0541760:CDS 40.0%
! GAAAGTGTGAAACCATGCAT+TGG + chr4_1:25799520-25799539 Msa0541760:intron 40.0%
CATGAGACAGTTCATGAATC+TGG - chr4_1:25799743-25799762 None:intergenic 40.0%
!! CATTGATTTGTGCAGGAAAG+AGG + chr4_1:25799767-25799786 Msa0541760:intron 40.0%
AACCTTAACTATGTCAGAGC+AGG - chr4_1:25799858-25799877 None:intergenic 40.0%
CATTGCTTGATATACTTGGC+TGG - chr4_1:25800140-25800159 None:intergenic 40.0%
CAGCCAAGTATATCAAGCAA+TGG + chr4_1:25800138-25800157 Msa0541760:CDS 40.0%
ATTGGCTATGAACGCTTTCT+TGG + chr4_1:25800203-25800222 Msa0541760:CDS 40.0%
! ACTTTCTGAGAGATGTGCTA+TGG - chr4_1:25800271-25800290 None:intergenic 40.0%
CACATCTCTCAGAAAGTTCT+GGG + chr4_1:25800274-25800293 Msa0541760:intron 40.0%
ACAGAAAATGGGAGGTAATC+AGG - chr4_1:25800350-25800369 None:intergenic 40.0%
CAGATAATCCCCACTAAGAA+AGG - chr4_1:25800385-25800404 None:intergenic 40.0%
AACCAGAAGATATAAGGGCA+AGG - chr4_1:25800433-25800452 None:intergenic 40.0%
TTCTAAATCCTGATAGGGGA+TGG + chr4_1:25800499-25800518 Msa0541760:intron 40.0%
TCTAAATCCTGATAGGGGAT+GGG + chr4_1:25800500-25800519 Msa0541760:intron 40.0%
ACTACTTGATCAATGATCCC+AGG - chr4_1:25800576-25800595 None:intergenic 40.0%
TTGGGATCATCAAGTCTCTT+AGG - chr4_1:25800601-25800620 None:intergenic 40.0%
TGGTGATTTAAAGATTCCCG+TGG + chr4_1:25800755-25800774 Msa0541760:intron 40.0%
GGTGATTTAAAGATTCCCGT+GGG + chr4_1:25800756-25800775 Msa0541760:intron 40.0%
AAGTCGCTGCTATATATCTC+GGG - chr4_1:25800815-25800834 None:intergenic 40.0%
GAAGTCGCTGCTATATATCT+CGG - chr4_1:25800816-25800835 None:intergenic 40.0%
TATTACAACTGGCAAAGGAG+TGG - chr4_1:25800840-25800859 None:intergenic 40.0%
CATAAATCAAAGATCTGGGG+TGG - chr4_1:25801138-25801157 None:intergenic 40.0%
AAAATGGGCAAGTCGTAAAG+AGG - chr4_1:25801208-25801227 None:intergenic 40.0%
CAGAATATAGTGTTGTCAGG+AGG + chr4_1:25801241-25801260 Msa0541760:intron 40.0%
AGGAGGATCAACAATGTTCA+AGG + chr4_1:25801258-25801277 Msa0541760:CDS 40.0%
ACAATGTGTCAATGGTTGAC+TGG - chr4_1:25801467-25801486 None:intergenic 40.0%
CTTCCAAACATGTGTACATG+TGG - chr4_1:25801615-25801634 None:intergenic 40.0%
CCAATAAACATATAGCTGCG+AGG - chr4_1:25801830-25801849 None:intergenic 40.0%
CCTCGCAGCTATATGTTTAT+TGG + chr4_1:25801827-25801846 Msa0541760:intron 40.0%
CTGCAAATCTTTGGATAGGA+TGG - chr4_1:25801932-25801951 None:intergenic 40.0%
!! AGATTTGCAGTTTGGTTTGG+TGG + chr4_1:25801942-25801961 Msa0541760:CDS 40.0%
GTCTCAGAATAAATGTGTCC+AGG - chr4_1:25802083-25802102 None:intergenic 40.0%
TTGTCATGCAATCCATTCAC+CGG - chr4_1:25802199-25802218 None:intergenic 40.0%
CAAATTGTCTTGGAGTTGGA+CGG - chr4_1:25802514-25802533 None:intergenic 40.0%
CCTTCAAATTGTCTTGGAGT+TGG - chr4_1:25802518-25802537 None:intergenic 40.0%
CCAACTCCAAGACAATTTGA+AGG + chr4_1:25802515-25802534 Msa0541760:intron 40.0%
! GTGTTAACTCTCTGGTTCAT+AGG + chr4_1:25802829-25802848 Msa0541760:intron 40.0%
! GTTAACTCTCTGGTTCATAG+GGG + chr4_1:25802831-25802850 Msa0541760:intron 40.0%
AGAACCCTAGTTCAATTCCT+GGG - chr4_1:25802922-25802941 None:intergenic 40.0%
GATGGAAACAACCAAGTGAT+GGG - chr4_1:25802990-25803009 None:intergenic 40.0%
CCTTGAAAACAGGATTTGTG+CGG - chr4_1:25803114-25803133 None:intergenic 40.0%
! CGCACAAATCCTGTTTTCAA+GGG + chr4_1:25803112-25803131 Msa0541760:CDS 40.0%
!! GCACAAATCCTGTTTTCAAG+GGG + chr4_1:25803113-25803132 Msa0541760:CDS 40.0%
! ATTTTACACTTCTGCTACCC+TGG - chr4_1:25803264-25803283 None:intergenic 40.0%
! TGACTTGAAATTGGCTTCCT+AGG - chr4_1:25803340-25803359 None:intergenic 40.0%
! GCCAATTTCAAGTCATCATG+TGG + chr4_1:25803345-25803364 Msa0541760:three_prime_UTR 40.0%
! AAAATGTTGGCTGAGCTGAA+TGG + chr4_1:25803429-25803448 Msa0541760:three_prime_UTR 40.0%
AGGCAGGAGATTAAATTCGT+TGG + chr4_1:25803539-25803558 Msa0541760:three_prime_UTR 40.0%
GGCAGGAGATTAAATTCGTT+GGG + chr4_1:25803540-25803559 Msa0541760:three_prime_UTR 40.0%
AGGTATGTAATGCACACTTC+AGG + chr4_1:25803635-25803654 Msa0541760:three_prime_UTR 40.0%
GAGATTTAGGCAGAGGATCA+TGG - chr4_1:25797995-25798014 None:intergenic 45.0%
CAGTAGAGAGATTTAGGCAG+AGG - chr4_1:25798002-25798021 None:intergenic 45.0%
CTCTGCCTAAATCTCTCTAC+TGG + chr4_1:25798000-25798019 Msa0541760:five_prime_UTR 45.0%
!! ATGGAGTGAGAAAAGGTACC+CGG - chr4_1:25798131-25798150 None:intergenic 45.0%
TCGTTAATCGCAACCACACT+AGG - chr4_1:25798389-25798408 None:intergenic 45.0%
TGGATTGCTCAGCATAATGC+TGG + chr4_1:25798449-25798468 Msa0541760:CDS 45.0%
GGATTGCTCAGCATAATGCT+GGG + chr4_1:25798450-25798469 Msa0541760:CDS 45.0%
GATTGCTCAGCATAATGCTG+GGG + chr4_1:25798451-25798470 Msa0541760:CDS 45.0%
TCAGCATAATGCTGGGGTTA+TGG + chr4_1:25798457-25798476 Msa0541760:CDS 45.0%
CTCACTTACCCGATTAAGCA+TGG + chr4_1:25798545-25798564 Msa0541760:CDS 45.0%
TTACCCGATTAAGCATGGTC+AGG + chr4_1:25798550-25798569 Msa0541760:CDS 45.0%
CAACCTGACCATGCTTAATC+GGG - chr4_1:25798556-25798575 None:intergenic 45.0%
!! AGCATGGTCAGGTTGAGAAT+TGG + chr4_1:25798561-25798580 Msa0541760:CDS 45.0%
!! GCATGGTCAGGTTGAGAATT+GGG + chr4_1:25798562-25798581 Msa0541760:CDS 45.0%
TTATTTGCGGTGTGATCCTG+AGG + chr4_1:25798622-25798641 Msa0541760:CDS 45.0%
CTGAGAGTCGTGAGTATACT+GGG + chr4_1:25798684-25798703 Msa0541760:CDS 45.0%
TGAGAGTCGTGAGTATACTG+GGG + chr4_1:25798685-25798704 Msa0541760:CDS 45.0%
TTCACGGCAATGTAAAGTCC+AGG - chr4_1:25798737-25798756 None:intergenic 45.0%
GAGAGCAAGCACAGAATTCA+CGG - chr4_1:25798753-25798772 None:intergenic 45.0%
! GTCGTAGTTGATATCGGAGA+TGG + chr4_1:25799254-25799273 Msa0541760:CDS 45.0%
! CGTAGTTGATATCGGAGATG+GGG + chr4_1:25799256-25799275 Msa0541760:CDS 45.0%
ATCAGTTCCTATTGCGGGAA+AGG + chr4_1:25799331-25799350 Msa0541760:CDS 45.0%
GTAACATCCTTTCCCGCAAT+AGG - chr4_1:25799341-25799360 None:intergenic 45.0%
! TTTTCGTCCAGCAGCTAATG+CGG + chr4_1:25799363-25799382 Msa0541760:CDS 45.0%
CACCTGCTCTGACATAGTTA+AGG + chr4_1:25799853-25799872 Msa0541760:CDS 45.0%
!! AGAGGCGTTAAACCAAAGAC+TGG + chr4_1:25800161-25800180 Msa0541760:CDS 45.0%
! GAGGCGTTAAACCAAAGACT+GGG + chr4_1:25800162-25800181 Msa0541760:CDS 45.0%
AGGCGTTAAACCAAAGACTG+GGG + chr4_1:25800163-25800182 Msa0541760:CDS 45.0%
GCACATCTCTCAGAAAGTTC+TGG + chr4_1:25800273-25800292 Msa0541760:intron 45.0%
TGCCTTGCCCTTATATCTTC+TGG + chr4_1:25800428-25800447 Msa0541760:intron 45.0%
! CGAAGTGCGTTTTCTGTTGT+TGG + chr4_1:25801088-25801107 Msa0541760:intron 45.0%
CCAAACATGTGTACATGTGG+AGG - chr4_1:25801612-25801631 None:intergenic 45.0%
CCTCCACATGTACACATGTT+TGG + chr4_1:25801609-25801628 Msa0541760:intron 45.0%
ATGAAGCACGGATACGTACA+CGG + chr4_1:25801665-25801684 Msa0541760:intron 45.0%
TAGATTATGTCTTGCTCCCG+AGG + chr4_1:25802168-25802187 Msa0541760:intron 45.0%
! TCTCTGGTTCATAGGGGAAA+GGG + chr4_1:25802837-25802856 Msa0541760:intron 45.0%
AGCCGAACTCCAGATTACTA+GGG - chr4_1:25802864-25802883 None:intergenic 45.0%
TTCCACCCAGGAATTGAACT+AGG + chr4_1:25802914-25802933 Msa0541760:intron 45.0%
TCCACCCAGGAATTGAACTA+GGG + chr4_1:25802915-25802934 Msa0541760:intron 45.0%
GAGAACCCTAGTTCAATTCC+TGG - chr4_1:25802923-25802942 None:intergenic 45.0%
GGTTAATGAGCTCCACCAAT+GGG - chr4_1:25802960-25802979 None:intergenic 45.0%
TGGTTAATGAGCTCCACCAA+TGG - chr4_1:25802961-25802980 None:intergenic 45.0%
GGATGGAAACAACCAAGTGA+TGG - chr4_1:25802991-25803010 None:intergenic 45.0%
! TGGTTGTTTCCATCCGTTCT+TGG + chr4_1:25802996-25803015 Msa0541760:intron 45.0%
!! CATTAGCTCTGCACCAAGAA+CGG - chr4_1:25803012-25803031 None:intergenic 45.0%
TGTGCAGGCTTGTCATACAA+AGG + chr4_1:25803057-25803076 Msa0541760:intron 45.0%
! CCGCACAAATCCTGTTTTCA+AGG + chr4_1:25803111-25803130 Msa0541760:CDS 45.0%
AAGAGAAGAGACTGCATCCA+TGG - chr4_1:25803169-25803188 None:intergenic 45.0%
AGAGACTGTGAGATGAAACG+AGG - chr4_1:25803230-25803249 None:intergenic 45.0%
AGTCTCTCTTCCAATCTTCC+AGG + chr4_1:25803243-25803262 Msa0541760:three_prime_UTR 45.0%
GTCTCTCTTCCAATCTTCCA+GGG + chr4_1:25803244-25803263 Msa0541760:three_prime_UTR 45.0%
TGGTTAATATGGTTGCCAGC+AGG + chr4_1:25803365-25803384 Msa0541760:three_prime_UTR 45.0%
CAGGTCCAGATGGTACTTAT+TGG + chr4_1:25803384-25803403 Msa0541760:three_prime_UTR 45.0%
!!! TATTTTTTAGTTTTTTTTAT+TGG + chr4_1:25798236-25798255 Msa0541760:intron 5.0%
!! AAAAAAAAAAAAGAAAAAAA+AGG - chr4_1:25802801-25802820 None:intergenic 5.0%
CCATTGTCGATGACAACAGC+AGG - chr4_1:25798106-25798125 None:intergenic 50.0%
CCTGCTGTTGTCATCGACAA+TGG + chr4_1:25798103-25798122 Msa0541760:CDS 50.0%
GTTGTCATCGACAATGGCTC+CGG + chr4_1:25798109-25798128 Msa0541760:CDS 50.0%
TTGTCATCGACAATGGCTCC+GGG + chr4_1:25798110-25798129 Msa0541760:CDS 50.0%
GGTTGAGAATTGGGATGCCA+TGG + chr4_1:25798571-25798590 Msa0541760:CDS 50.0%
CCAGTATACTCACGACTCTC+AGG - chr4_1:25798686-25798705 None:intergenic 50.0%
CCTGAGAGTCGTGAGTATAC+TGG + chr4_1:25798683-25798702 Msa0541760:CDS 50.0%
! TGCTGGCTACACTACGTCTA+AGG + chr4_1:25798775-25798794 Msa0541760:CDS 50.0%
TGAGTAAGAACTGGTTGCGG+TGG + chr4_1:25799078-25799097 Msa0541760:intron 50.0%
CATGTTGTACCAGTTGCGGA+TGG + chr4_1:25799284-25799303 Msa0541760:CDS 50.0%
TTTCGTCCAGCAGCTAATGC+GGG + chr4_1:25799364-25799383 Msa0541760:CDS 50.0%
ACTTCGAACGAGTCTTCTGG+TGG - chr4_1:25799803-25799822 None:intergenic 50.0%
ACCAGAAGACTCGTTCGAAG+TGG + chr4_1:25799802-25799821 Msa0541760:CDS 50.0%
AAGACTCGTTCGAAGTGGCT+CGG + chr4_1:25799807-25799826 Msa0541760:CDS 50.0%
GAATATGGAGCCCCAGTCTT+TGG - chr4_1:25800176-25800195 None:intergenic 50.0%
! TGGCCCTGAGGTTTGTTCTT+TGG + chr4_1:25800223-25800242 Msa0541760:intron 50.0%
GGGCCAAAGAACAAACCTCA+GGG - chr4_1:25800229-25800248 None:intergenic 50.0%
ATCCTGATAGGGGATGGGAA+AGG + chr4_1:25800505-25800524 Msa0541760:intron 50.0%
TCCTGATAGGGGATGGGAAA+GGG + chr4_1:25800506-25800525 Msa0541760:intron 50.0%
GGAAAGGGATGCTTAAGTGC+AGG + chr4_1:25800521-25800540 Msa0541760:intron 50.0%
AAGTGCAGGCAATGCACATC+CGG + chr4_1:25800535-25800554 Msa0541760:intron 50.0%
CAGGTTCCAAAATCCCAACC+CGG - chr4_1:25800557-25800576 None:intergenic 50.0%
!!! GGGTTGGGATTTTGGAACCT+GGG + chr4_1:25800556-25800575 Msa0541760:intron 50.0%
AGTCTGCGCCAATTGACACA+AGG + chr4_1:25800873-25800892 Msa0541760:CDS 50.0%
! GTTTTCTGTTGTTGGCCCAG+AGG + chr4_1:25801096-25801115 Msa0541760:intron 50.0%
CTTCCGACTGATAAGCCTCT+GGG - chr4_1:25801114-25801133 None:intergenic 50.0%
TCTTCCGACTGATAAGCCTC+TGG - chr4_1:25801115-25801134 None:intergenic 50.0%
! TTCTATGTGTCGTGTCGGTG+TGG + chr4_1:25801743-25801762 Msa0541760:intron 50.0%
! TCTATGTGTCGTGTCGGTGT+GGG + chr4_1:25801744-25801763 Msa0541760:intron 50.0%
!! TATGAAGCACTGGCACTCCT+CGG - chr4_1:25801795-25801814 None:intergenic 50.0%
CTGAGTACATTGACCTCGAC+TGG - chr4_1:25801909-25801928 None:intergenic 50.0%
TGGATTGCATGACAATGCCC+TGG + chr4_1:25802204-25802223 Msa0541760:intron 50.0%
! CTCTCTGGTTCATAGGGGAA+AGG + chr4_1:25802836-25802855 Msa0541760:intron 50.0%
! CTCTGGTTCATAGGGGAAAG+GGG + chr4_1:25802838-25802857 Msa0541760:intron 50.0%
! GGCCCTAGTAATCTGGAGTT+CGG + chr4_1:25802859-25802878 Msa0541760:intron 50.0%
CAGCCGAACTCCAGATTACT+AGG - chr4_1:25802865-25802884 None:intergenic 50.0%
! TAATCTGGAGTTCGGCTGTG+TGG + chr4_1:25802867-25802886 Msa0541760:intron 50.0%
GCTGTGTGGTAAGTAAAGCC+TGG + chr4_1:25802881-25802900 Msa0541760:intron 50.0%
TTCCTGGGTGGAACAGTTCT+TGG - chr4_1:25802907-25802926 None:intergenic 50.0%
ACCCTAGTTCAATTCCTGGG+TGG - chr4_1:25802919-25802938 None:intergenic 50.0%
AACCACTTGAGCCCATCACT+TGG + chr4_1:25802976-25802995 Msa0541760:intron 50.0%
!! AACCAAGTGATGGGCTCAAG+TGG - chr4_1:25802981-25803000 None:intergenic 50.0%
!! ATTTCTGGCTCGCAATGTGC+AGG + chr4_1:25803042-25803061 Msa0541760:intron 50.0%
CTTCTGCTACCCTGGAAGAT+TGG - chr4_1:25803256-25803275 None:intergenic 50.0%
TAAGTACCATCTGGACCTGC+TGG - chr4_1:25803383-25803402 None:intergenic 50.0%
! GGGATGCCATGGAGCGATTT+TGG + chr4_1:25798582-25798601 Msa0541760:CDS 55.0%
CTGCTGCCAAAATCGCTCCA+TGG - chr4_1:25798591-25798610 None:intergenic 55.0%
TACCTACCCGCATTAGCTGC+TGG - chr4_1:25799373-25799392 None:intergenic 55.0%
GCCACTTCGAACGAGTCTTC+TGG - chr4_1:25799806-25799825 None:intergenic 55.0%
! CGAAGTGGCTCGGAAAGTGA+AGG + chr4_1:25799817-25799836 Msa0541760:CDS 55.0%
TGAACGCTTTCTTGGCCCTG+AGG + chr4_1:25800211-25800230 Msa0541760:CDS 55.0%
CGGGCCAAAGAACAAACCTC+AGG - chr4_1:25800230-25800249 None:intergenic 55.0%
TCCCTTTCCCATCCCCTATC+AGG - chr4_1:25800510-25800529 None:intergenic 55.0%
AGTGCAGGCAATGCACATCC+GGG + chr4_1:25800536-25800555 Msa0541760:intron 55.0%
AGGCAATGCACATCCGGGTT+GGG + chr4_1:25800541-25800560 Msa0541760:intron 55.0%
!! GCACATCCGGGTTGGGATTT+TGG + chr4_1:25800548-25800567 Msa0541760:intron 55.0%
!!! CGGGTTGGGATTTTGGAACC+TGG + chr4_1:25800555-25800574 Msa0541760:intron 55.0%
TGGCCCAGAGGCTTATCAGT+CGG + chr4_1:25801108-25801127 Msa0541760:intron 55.0%
ACCAGGACACGTCTAATCCG+AGG + chr4_1:25801775-25801794 Msa0541760:intron 55.0%
! TCCTCGGATTAGACGTGTCC+TGG - chr4_1:25801779-25801798 None:intergenic 55.0%
TCCACAGTCACATCCAGTCG+AGG + chr4_1:25801893-25801912 Msa0541760:intron 55.0%
ACCTCGACTGGATGTGACTG+TGG - chr4_1:25801897-25801916 None:intergenic 55.0%
TCCATTCACCGGTGCTTCCT+CGG - chr4_1:25802188-25802207 None:intergenic 55.0%
GGAAAGGGGCCCTAGTAATC+TGG + chr4_1:25802852-25802871 Msa0541760:intron 55.0%
CTCTCGAACGATTCGCCCAT+TGG + chr4_1:25802942-25802961 Msa0541760:intron 55.0%
TCGAACGATTCGCCCATTGG+TGG + chr4_1:25802945-25802964 Msa0541760:intron 55.0%
AGCTCTGCACCAAGAACGGA+TGG - chr4_1:25803008-25803027 None:intergenic 55.0%
CAGCAGGACGAGAAGCAGCT+GGG - chr4_1:25798090-25798109 None:intergenic 60.0%
ACAGCAGGACGAGAAGCAGC+TGG - chr4_1:25798091-25798110 None:intergenic 60.0%
! AGGCGCTGTCAACGGACTCT+CGG - chr4_1:25798666-25798685 None:intergenic 60.0%
! CGACTCTCAGGCGCTGTCAA+CGG - chr4_1:25798674-25798693 None:intergenic 60.0%
TCTGTGCTTGCTCTCGCTGC+TGG + chr4_1:25798758-25798777 Msa0541760:CDS 60.0%
GCCTAGCGGAAAGATGCTGC+CGG + chr4_1:25798875-25798894 Msa0541760:intron 60.0%
GTCCAGCAGCTAATGCGGGT+AGG + chr4_1:25799368-25799387 Msa0541760:intron 60.0%
CAGGCAATGCACATCCGGGT+TGG + chr4_1:25800540-25800559 Msa0541760:intron 60.0%
TAAGGCGCGCTTCAGCTGCA+AGG - chr4_1:25801336-25801355 None:intergenic 60.0%
GCAGCTGAAGCGCGCCTTAA+TGG + chr4_1:25801337-25801356 Msa0541760:CDS 60.0%
! TCTTGCTCCCGAGGAAGCAC+CGG + chr4_1:25802177-25802196 Msa0541760:intron 60.0%
CCATTCACCGGTGCTTCCTC+GGG - chr4_1:25802187-25802206 None:intergenic 60.0%
GGGTGGAACAGTTCTTGGCC+AGG - chr4_1:25802902-25802921 None:intergenic 60.0%
GGCCAAGAACTGTTCCACCC+AGG + chr4_1:25802902-25802921 Msa0541760:intron 60.0%
TGGTTGCCAGCAGGTCCAGA+TGG + chr4_1:25803374-25803393 Msa0541760:three_prime_UTR 60.0%
GCCGGCAGCATCTTTCCGCT+AGG - chr4_1:25798879-25798898 None:intergenic 65.0%
CGGTGTGGGACACGAACACC+AGG + chr4_1:25801758-25801777 Msa0541760:intron 65.0%
!! CCCGAGGAAGCACCGGTGAA+TGG + chr4_1:25802184-25802203 Msa0541760:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 25797764 25803716 25797764 ID=Msa0541760;Name=Msa0541760
chr4_1 mRNA 25797764 25803716 25797764 ID=Msa0541760-mRNA-1;Parent=Msa0541760;Name=Msa0541760-mRNA-1;_AED=0.05;_eAED=0.05;_QI=318|1|1|1|1|1|9|572|428
chr4_1 exon 25797764 25798131 25797764 ID=Msa0541760-mRNA-1:exon:6992;Parent=Msa0541760-mRNA-1
chr4_1 exon 25798337 25798796 25798337 ID=Msa0541760-mRNA-1:exon:6993;Parent=Msa0541760-mRNA-1
chr4_1 exon 25799239 25799385 25799239 ID=Msa0541760-mRNA-1:exon:6994;Parent=Msa0541760-mRNA-1
chr4_1 exon 25799782 25799874 25799782 ID=Msa0541760-mRNA-1:exon:6995;Parent=Msa0541760-mRNA-1
chr4_1 exon 25800113 25800232 25800113 ID=Msa0541760-mRNA-1:exon:6996;Parent=Msa0541760-mRNA-1
chr4_1 exon 25800800 25800910 25800800 ID=Msa0541760-mRNA-1:exon:6997;Parent=Msa0541760-mRNA-1
chr4_1 exon 25801244 25801369 25801244 ID=Msa0541760-mRNA-1:exon:6998;Parent=Msa0541760-mRNA-1
chr4_1 exon 25801900 25801998 25801900 ID=Msa0541760-mRNA-1:exon:6999;Parent=Msa0541760-mRNA-1
chr4_1 exon 25803064 25803716 25803064 ID=Msa0541760-mRNA-1:exon:7000;Parent=Msa0541760-mRNA-1
chr4_1 five_prime_UTR 25797764 25798081 25797764 ID=Msa0541760-mRNA-1:five_prime_utr;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25798082 25798131 25798082 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25798337 25798796 25798337 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25799239 25799385 25799239 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25799782 25799874 25799782 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25800113 25800232 25800113 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25800800 25800910 25800800 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25801244 25801369 25801244 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25801900 25801998 25801900 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 CDS 25803064 25803144 25803064 ID=Msa0541760-mRNA-1:cds;Parent=Msa0541760-mRNA-1
chr4_1 three_prime_UTR 25803145 25803716 25803145 ID=Msa0541760-mRNA-1:three_prime_utr;Parent=Msa0541760-mRNA-1
Gene Sequence

>Msa0541760

ATGGACCCAGCTGCTTCTCGTCCTGCTGTTGTCATCGACAATGGCTCCGGGTATACGAAAATGGGCTTTGCTGGTAATGTTGAACCTTGTTTTATTGTTCCTAGTGTGGTTGCGATTAACGAGTCGTTTCTGAATCAATCGAGAAGTTCTTCTAAAGGAAATTGGATTGCTCAGCATAATGCTGGGGTTATGGCTGATCTTGATTTCTTTATTGGAGATGATGCTCTTTCTAAGTCTCGATCTAGTAGTACTTATAATCTCACTTACCCGATTAAGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGATTTTGGCAGCAGTGTATATTCAATTATTTGCGGTGTGATCCTGAGGATCATTATTTTCTTTTGACCGAGAGTCCGTTGACAGCGCCTGAGAGTCGTGAGTATACTGGGGAAATTATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCCGTGAATTCTGTGCTTGCTCTCGCTGCTGGCTACACTACGTCTAAGTGTGAGATGACAGGAGTCGTAGTTGATATCGGAGATGGGGCTACACATGTTGTACCAGTTGCGGATGGTTATGTTATTGGAAGTAGCATCAAATCAGTTCCTATTGCGGGAAAGGATGTTACTCTTTTCGTCCAGCAGCTAATGCGGGAAAGAGGAGAGAATATACCACCAGAAGACTCGTTCGAAGTGGCTCGGAAAGTGAAGGAAATGCATTGCTACACCTGCTCTGACATAGTTAAGGAATATAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGAGAGGCGTTAAACCAAAGACTGGGGCTCCATATTCTTGTGATATTGGCTATGAACGCTTTCTTGGCCCTGAGGTTTTCTTTAATCCCGAGATATATAGCAGCGACTTCACCACTCCTTTGCCAGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATATAAGAATATAGTGTTGTCAGGAGGATCAACAATGTTCAAGGATTTTCACAGGAGATTACAACGTGATATAAAGAAAATAGTCGATGCTCGTGTCCTTGCAGCTGAAGCGCGCCTTAATGGAGAGATAAAATCACATCCAGTCGAGGTCAATGTACTCAGCCATCCTATCCAAAGATTTGCAGTTTGGTTTGGTGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATACGAAGAATATGGAGCAAGCATTTGCCGCACAAATCCTGTTTTCAAGGGGATGTATTAA
Protein sequence

>Msa0541760

MDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPSVVAINESFLNQSRSSSKGNWIAQHNAGVMADLDFFIGDDALSKSRSSSTYNLTYPIKHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENIPPEDSFEVARKVKEMHCYTCSDIVKEYNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDIKKIVDARVLAAEARLNGEIKSHPVEVNVLSHPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY*