AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566690 MtrunA17_Chr8g0381261 99.752 403 1 0 1 403 1 403 0.0 840
Msa0566690 MtrunA17_Chr2g0278591 34.606 393 207 8 10 400 10 354 8.26e-71 229
Msa0566690 MtrunA17_Chr7g0223901 34.097 393 209 8 10 400 10 354 4.75e-68 221
Msa0566690 MtrunA17_Chr3g0129641 34.271 391 211 8 10 400 10 354 7.19e-68 221
Msa0566690 MtrunA17_Chr2g0328091 34.097 393 209 8 10 400 10 354 1.56e-67 220
Msa0566690 MtrunA17_Chr6g0448881 33.588 393 211 8 10 400 10 354 1.92e-67 220
Msa0566690 MtrunA17_Chr7g0258721 34.414 401 197 10 10 400 10 354 2.72e-67 219
Msa0566690 MtrunA17_Chr1g0175391 34.097 393 209 8 10 400 10 354 3.44e-67 219
Msa0566690 MtrunA17_Chr7g0224401 32.258 403 236 10 6 404 3 372 1.09e-59 200
Msa0566690 MtrunA17_Chr8g0361001 28.345 441 239 13 9 400 9 421 4.03e-42 154
Msa0566690 MtrunA17_Chr5g0427591 28.345 441 239 13 9 400 9 421 1.10e-41 153
Msa0566690 MtrunA17_Chr2g0305361 24.779 452 246 14 4 400 2 414 4.69e-28 115
Msa0566690 MtrunA17_Chr3g0089031 25.128 390 232 13 9 395 3 335 4.21e-22 97.4
Msa0566690 MtrunA17_Chr3g0111971 25.926 270 173 6 5 267 17 266 5.17e-15 77.4
Msa0566690 MtrunA17_Chr8g0336071 38.000 100 55 2 124 222 2 95 2.19e-14 68.9
Msa0566690 MtrunA17_Chr3g0080021 24.335 263 167 9 104 353 174 417 8.00e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566690 AT1G13180.1 87.781 401 48 1 1 401 1 400 0.0 756
Msa0566690 AT2G42100.1 34.184 392 212 9 9 400 10 355 1.36e-68 223
Msa0566690 AT3G53750.1 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT3G53750.2 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT2G37620.1 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT2G37620.3 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT2G37620.2 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT2G37620.4 33.842 393 210 8 10 400 10 354 6.49e-68 221
Msa0566690 AT3G12110.1 33.842 393 210 8 10 400 10 354 9.93e-68 221
Msa0566690 AT5G09810.1 34.351 393 208 8 10 400 10 354 1.60e-67 221
Msa0566690 AT5G59370.2 34.165 401 198 10 10 400 10 354 6.97e-67 219
Msa0566690 AT5G59370.1 34.165 401 198 10 10 400 10 354 6.97e-67 219
Msa0566690 AT3G46520.2 34.165 401 198 10 10 400 10 354 1.17e-66 218
Msa0566690 AT3G46520.1 34.165 401 198 10 10 400 10 354 1.17e-66 218
Msa0566690 AT3G18780.1 33.504 391 214 8 10 400 10 354 3.80e-66 217
Msa0566690 AT3G18780.2 33.504 391 214 8 10 400 10 354 5.79e-66 216
Msa0566690 AT3G18780.3 33.504 391 214 8 10 400 10 354 5.79e-66 216
Msa0566690 AT1G49240.1 33.504 391 214 8 10 400 10 354 8.13e-66 216
Msa0566690 AT2G42090.1 31.043 393 216 8 10 400 4 343 2.53e-60 201
Msa0566690 AT3G27000.1 32.108 408 230 10 6 404 3 372 5.78e-60 201
Msa0566690 AT2G42170.4 34.421 337 187 7 64 400 4 306 1.61e-57 192
Msa0566690 AT2G42170.2 34.421 337 187 7 64 400 4 306 1.61e-57 192
Msa0566690 AT2G42170.1 34.421 337 187 7 64 400 4 306 2.59e-57 192
Msa0566690 AT2G42170.3 34.421 337 187 7 64 400 4 306 2.59e-57 192
Msa0566690 AT1G18450.1 28.702 439 237 12 9 400 9 418 1.59e-43 159
Msa0566690 AT3G33520.1 25.740 439 232 13 10 400 5 397 3.24e-27 113
Msa0566690 AT2G42170.5 30.088 226 132 5 175 400 9 208 3.49e-25 103
Msa0566690 AT3G60830.1 26.087 391 227 13 9 395 3 335 1.46e-22 99.0
Msa0566690 AT3G12380.1 25.979 281 173 9 10 278 22 279 2.43e-15 79.0
Msa0566690 AT3G12380.2 25.704 284 176 9 10 278 22 285 2.21e-14 75.9
Msa0566690 AT1G73910.1 30.216 139 92 2 9 147 9 142 2.65e-12 64.7
Msa0566690 AT1G73910.2 30.216 139 92 2 9 147 9 142 2.65e-12 64.7

Find 143 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGATCTTGATTTCTTTAT+TGG 0.095428 4_1:-67826576 Msa0566690:CDS
CAGATCCAGTAGAGAGATTT+AGG 0.218576 4_1:+67827042 None:intergenic
GAAGTTCTTCTAAAGGAAAT+TGG 0.220793 4_1:-67826626 Msa0566690:CDS
ACCACATGATGACTTGAAAT+TGG 0.221840 4_1:+67821733 None:intergenic
AAGTCATCATGTGGTTAATA+TGG 0.223085 4_1:-67821725 Msa0566690:three_prime_UTR
GGGATGCCATGGAGCGATTT+TGG 0.248634 4_1:-67826473 Msa0566690:CDS
TTGAGAAGGAAAGTATATTT+AGG 0.249294 4_1:-67827262 Msa0566690:five_prime_UTR
TTGTTGCAGGTATACGAAAA+TGG 0.249521 4_1:-67826727 Msa0566690:intron
GTTGCGGATGGTTATGTTAT+TGG 0.252532 4_1:-67825759 Msa0566690:CDS
GCAGCTGAAGCGCGCCTTAA+TGG 0.265252 4_1:-67823742 Msa0566690:CDS
GAATATGGAGCCCCAGTCTT+TGG 0.285326 4_1:+67824882 None:intergenic
GCTCCATATTCTTGTGATAT+TGG 0.295202 4_1:-67824870 Msa0566690:CDS
CAGCCGAACTCCAGATTACT+AGG 0.309367 4_1:+67822217 None:intergenic
TCAACCTGACCATGCTTAAT+CGG 0.327099 4_1:+67826501 None:intergenic
ATTGGCTATGAACGCTTTCT+TGG 0.327285 4_1:-67824852 Msa0566690:CDS
CAAACCAAACTGCAAATCTT+TGG 0.333787 4_1:+67823138 None:intergenic
TATACGAAAATGGGCTTTGC+TGG 0.344789 4_1:-67826717 Msa0566690:CDS
TAGCCAATATCACAAGAATA+TGG 0.346527 4_1:+67824867 None:intergenic
CCTGAGAGTCGTGAGTATAC+TGG 0.349298 4_1:-67826372 Msa0566690:CDS
CTATCCAAAGATTTGCAGTT+TGG 0.357424 4_1:-67823142 Msa0566690:CDS
AAGGCAGAATACGAAGAATA+TGG 0.364575 4_1:-67822003 Msa0566690:CDS
CACAAGGAGATCATTATATA+AGG 0.369729 4_1:-67824191 Msa0566690:intron
AGCATGGTCAGGTTGAGAAT+TGG 0.376747 4_1:-67826494 Msa0566690:CDS
GCCACTTCGAACGAGTCTTC+TGG 0.379121 4_1:+67825252 None:intergenic
GGAAAGGGGCCCTAGTAATC+TGG 0.379134 4_1:-67822227 Msa0566690:CDS
TCAGCATAATGCTGGGGTTA+TGG 0.382607 4_1:-67826598 Msa0566690:CDS
TAATACATCCCCTTGAAAAC+AGG 0.382856 4_1:+67821958 None:intergenic
ATCAAATCAGTTCCTATTGC+GGG 0.386908 4_1:-67825729 Msa0566690:CDS
GCATGGTCAGGTTGAGAATT+GGG 0.389411 4_1:-67826493 Msa0566690:CDS
CAAAGATTTGCAGTTTGGTT+TGG 0.389429 4_1:-67823137 Msa0566690:CDS
TGACTTGAAATTGGCTTCCT+AGG 0.399595 4_1:+67821742 None:intergenic
TCTCCATTGCTTGATATACT+TGG 0.404016 4_1:+67824914 None:intergenic
TCTGTGCTTGCTCTCGCTGC+TGG 0.404421 4_1:-67826297 Msa0566690:CDS
AGGTATCTAATGCACACTTC+AGG 0.404496 4_1:-67821444 Msa0566690:three_prime_UTR
CAGGTCCAGATGGTACTTAT+TGG 0.404569 4_1:-67821695 Msa0566690:three_prime_UTR
TGTTGCAGGTATACGAAAAT+GGG 0.405987 4_1:-67826726 Msa0566690:intron
AGAACTGCAAGAATTAAAAC+TGG 0.407258 4_1:+67821766 None:intergenic
AGTCTCTCTTCCAATCTTCC+AGG 0.411218 4_1:-67821836 Msa0566690:three_prime_UTR
CCTCTGCTACCCTGGAAGAT+TGG 0.418930 4_1:+67821826 None:intergenic
AAAATGGTGAAAATCGGAAA+TGG 0.421533 4_1:+67827001 None:intergenic
TTTCAGAATATAGTGTTGTC+AGG 0.422885 4_1:-67823841 Msa0566690:intron
CATTGCTTGATATACTTGGC+TGG 0.423106 4_1:+67824918 None:intergenic
AATGATCTCCTTGTGTCAAT+TGG 0.425483 4_1:+67824199 None:intergenic
TTAGTGTTCAGCTTAGAGTT+TGG 0.425924 4_1:-67821621 Msa0566690:three_prime_UTR
TGCTGGCTACACTACGTCTA+AGG 0.427772 4_1:-67826280 Msa0566690:intron
AAATATACTTTCCTTCTCAA+TGG 0.428046 4_1:+67827265 None:intergenic
GGCAGGAGATTAAATTCGTT+GGG 0.432100 4_1:-67821539 Msa0566690:three_prime_UTR
AGATTTGCAGTTTGGTTTGG+TGG 0.432383 4_1:-67823134 Msa0566690:CDS
CTGAGAGTCGTGAGTATACT+GGG 0.432628 4_1:-67826371 Msa0566690:CDS
GGCCCTAGTAATCTGGAGTT+CGG 0.441865 4_1:-67822220 Msa0566690:CDS
ACAGGAGTCGTAGTTGATAT+CGG 0.443109 4_1:-67825807 Msa0566690:CDS
CTCTGCCTAAATCTCTCTAC+TGG 0.445890 4_1:-67827047 Msa0566690:five_prime_UTR
TAATTCTTGCAGTTCTTCCT+AGG 0.454993 4_1:-67821759 Msa0566690:three_prime_UTR
TCGTTAATCGCAACCACACT+AGG 0.456949 4_1:+67826669 None:intergenic
TCTCTGGTTCATAGGGGAAA+GGG 0.458364 4_1:-67822242 Msa0566690:intron
CATTGATTTGTGCAGGAAAG+AGG 0.458746 4_1:-67825288 Msa0566690:intron
TGGATTGCTCAGCATAATGC+TGG 0.465247 4_1:-67826606 Msa0566690:CDS
GTAACATCCTTTCCCGCAAT+AGG 0.466496 4_1:+67825717 None:intergenic
GTTGTCATCGACAATGGCTC+CGG 0.466593 4_1:-67826938 Msa0566690:CDS
CACCTGCTCTGACATAGTTA+AGG 0.470644 4_1:-67825202 Msa0566690:intron
ATCAGTTCCTATTGCGGGAA+AGG 0.476954 4_1:-67825724 Msa0566690:CDS
CCAGTATACTCACGACTCTC+AGG 0.480188 4_1:+67826372 None:intergenic
AGGCAGGAGATTAAATTCGT+TGG 0.485679 4_1:-67821540 Msa0566690:three_prime_UTR
CAACCTGACCATGCTTAATC+GGG 0.487813 4_1:+67826502 None:intergenic
GAGAGCAAGCACAGAATTCA+CGG 0.488016 4_1:+67826305 None:intergenic
CTGCAAATCTTTGGATAGGA+TGG 0.489552 4_1:+67823147 None:intergenic
ATCTACCAATAAGTACCATC+TGG 0.490428 4_1:+67821690 None:intergenic
AAAAGAAAATAATGATCCTC+AGG 0.490852 4_1:+67826417 None:intergenic
ATGCACTTGTCTATTACAAC+AGG 0.494188 4_1:+67824232 None:intergenic
AGGCGCTGTCAACGGACTCT+CGG 0.495487 4_1:+67826392 None:intergenic
CAGTAGAGAGATTTAGGCAG+AGG 0.498285 4_1:+67827048 None:intergenic
ATAACATAACCATCCGCAAC+TGG 0.499019 4_1:+67825762 None:intergenic
TAACGTAAGATAGTGGTTGT+TGG 0.499157 4_1:+67827129 None:intergenic
GAGATTTAGGCAGAGGATCA+TGG 0.499731 4_1:+67827055 None:intergenic
TACCTACCCGCATTAGCTGC+TGG 0.504471 4_1:+67825685 None:intergenic
ACAGCAGGACGAGAAGCAGC+TGG 0.509967 4_1:+67826959 None:intergenic
TAAGTACCATCTGGACCTGC+TGG 0.510470 4_1:+67821699 None:intergenic
CTCTCTGGTTCATAGGGGAA+AGG 0.512714 4_1:-67822243 Msa0566690:intron
GAAGTCGCTGCTATATATCT+CGG 0.516026 4_1:+67824267 None:intergenic
TTTCGTCCAGCAGCTAATGC+GGG 0.520923 4_1:-67825691 Msa0566690:intron
CTGAGTACATTGACCTCGAC+TGG 0.521211 4_1:+67823170 None:intergenic
GTCGTAGTTGATATCGGAGA+TGG 0.522188 4_1:-67825801 Msa0566690:CDS
AGGAGGATCAACAATGTTCA+AGG 0.526518 4_1:-67823821 Msa0566690:CDS
AGAGGCGTTAAACCAAAGAC+TGG 0.527817 4_1:-67824894 Msa0566690:CDS
CAATCGAGAAGTTCTTCTAA+AGG 0.532385 4_1:-67826633 Msa0566690:CDS
AAGTCGCTGCTATATATCTC+GGG 0.535811 4_1:+67824268 None:intergenic
TTACCCGATTAAGCATGGTC+AGG 0.538788 4_1:-67826505 Msa0566690:CDS
CTCTGGTTCATAGGGGAAAG+GGG 0.542698 4_1:-67822241 Msa0566690:intron
AGTGTATATTCAATTATTTG+CGG 0.546766 4_1:-67826446 Msa0566690:CDS
GGATTGCTCAGCATAATGCT+GGG 0.548668 4_1:-67826605 Msa0566690:CDS
CCTGCTGTTGTCATCGACAA+TGG 0.550059 4_1:-67826944 Msa0566690:CDS
CAAACTGCAAATCTTTGGAT+AGG 0.553466 4_1:+67823143 None:intergenic
AAGGGGATGTATTAAAGCAA+AGG 0.554078 4_1:-67821949 Msa0566690:CDS
TGGTTAATATGGTTGCCAGC+AGG 0.554493 4_1:-67821714 Msa0566690:three_prime_UTR
TTCACGGCAATGTAAAGTCC+AGG 0.555616 4_1:+67826321 None:intergenic
AGCGAGTTAACGTAAGATAG+TGG 0.556343 4_1:+67827122 None:intergenic
TCGTAGTTGATATCGGAGAT+GGG 0.559617 4_1:-67825800 Msa0566690:CDS
AGACTTTGATCGAAAGTGAA+AGG 0.560966 4_1:+67827099 None:intergenic
GGTTGAGAATTGGGATGCCA+TGG 0.561166 4_1:-67826484 Msa0566690:CDS
AAGAGAAGAGACTGCATCCA+TGG 0.563656 4_1:+67821913 None:intergenic
CGACTCTCAGGCGCTGTCAA+CGG 0.571890 4_1:+67826384 None:intergenic
AACCTTAACTATGTCAGAGC+AGG 0.574256 4_1:+67825200 None:intergenic
GAAAGAAAGATCCATTGAGA+AGG 0.576256 4_1:-67827276 Msa0566690:five_prime_UTR
GCCAATTTCAAGTCATCATG+TGG 0.582876 4_1:-67821734 Msa0566690:three_prime_UTR
TTGTCATCGACAATGGCTCC+GGG 0.583211 4_1:-67826937 Msa0566690:intron
CTGCTGCCAAAATCGCTCCA+TGG 0.585282 4_1:+67826467 None:intergenic
GTCTCTCTTCCAATCTTCCA+GGG 0.587966 4_1:-67821835 Msa0566690:three_prime_UTR
TTATTTGCGGTGTGATCCTG+AGG 0.590272 4_1:-67826433 Msa0566690:CDS
CCAATCTTCCAGGGTAGCAG+AGG 0.592515 4_1:-67821826 Msa0566690:three_prime_UTR
CCATTGTCGATGACAACAGC+AGG 0.592798 4_1:+67826944 None:intergenic
CATCAAATCAGTTCCTATTG+CGG 0.593258 4_1:-67825730 Msa0566690:CDS
GAGGCGTTAAACCAAAGACT+GGG 0.595159 4_1:-67824893 Msa0566690:CDS
TACACATGTTGTACCAGTTG+CGG 0.599702 4_1:-67825775 Msa0566690:CDS
TAAGGCGCGCTTCAGCTGCA+AGG 0.600648 4_1:+67823746 None:intergenic
CTCACTTACCCGATTAAGCA+TGG 0.602719 4_1:-67826510 Msa0566690:CDS
AAGACTCGTTCGAAGTGGCT+CGG 0.603015 4_1:-67825248 Msa0566690:CDS
TTTGAGATAGAGAAATGCTA+TGG 0.603557 4_1:-67821410 Msa0566690:three_prime_UTR
TTGTCTATTACAACAGGCAA+AGG 0.608553 4_1:+67824238 None:intergenic
TGGTTGCCAGCAGGTCCAGA+TGG 0.609507 4_1:-67821705 Msa0566690:three_prime_UTR
CAGCAGGACGAGAAGCAGCT+GGG 0.616158 4_1:+67826960 None:intergenic
CAGCCAAGTATATCAAGCAA+TGG 0.617742 4_1:-67824917 Msa0566690:CDS
TGAACGCTTTCTTGGCCCTG+AGG 0.617976 4_1:-67824844 Msa0566690:intron
ACCAGAAGACTCGTTCGAAG+TGG 0.622925 4_1:-67825253 Msa0566690:CDS
CGAAGTGGCTCGGAAAGTGA+AGG 0.622978 4_1:-67825238 Msa0566690:CDS
AAGGATGAATTAGCTGACCA+TGG 0.623738 4_1:-67821930 Msa0566690:CDS
CCTTGAAAACAGGATTTGTG+CGG 0.635643 4_1:+67821968 None:intergenic
CATGTTGTACCAGTTGCGGA+TGG 0.639900 4_1:-67825771 Msa0566690:CDS
AAAATGTTGGCTGAGCTGAA+TGG 0.641859 4_1:-67821650 Msa0566690:three_prime_UTR
TCCACAGTCACATCCAGTCG+AGG 0.643643 4_1:-67823183 Msa0566690:intron
TAATCTGGAGTTCGGCTGTG+TGG 0.643780 4_1:-67822212 Msa0566690:intron
CGTAGTTGATATCGGAGATG+GGG 0.648015 4_1:-67825799 Msa0566690:CDS
CAGAATATAGTGTTGTCAGG+AGG 0.650438 4_1:-67823838 Msa0566690:CDS
AGCCGAACTCCAGATTACTA+GGG 0.651897 4_1:+67822218 None:intergenic
AAGTATATCAAGCAATGGAG+AGG 0.653283 4_1:-67824912 Msa0566690:CDS
TGTGCAGGCTTGTCATACAA+AGG 0.662053 4_1:-67822022 Msa0566690:intron
GATTGCTCAGCATAATGCTG+GGG 0.663436 4_1:-67826604 Msa0566690:CDS
TATTACAACAGGCAAAGGAG+TGG 0.671222 4_1:+67824243 None:intergenic
ACTTCGAACGAGTCTTCTGG+TGG 0.687169 4_1:+67825255 None:intergenic
AGTCTGCGCCAATTGACACA+AGG 0.690930 4_1:-67824207 Msa0566690:CDS
ACACTAGGAACAATAAAACA+AGG 0.696455 4_1:+67826684 None:intergenic
AGAGACTGTGAGATGAAACG+AGG 0.732235 4_1:+67821852 None:intergenic
AGGCGTTAAACCAAAGACTG+GGG 0.735801 4_1:-67824892 Msa0566690:CDS
TGAGAGTCGTGAGTATACTG+GGG 0.741187 4_1:-67826370 Msa0566690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAACAATATTAAAATA+TGG + chr4_1:67826187-67826206 None:intergenic 10.0%
!!! AGTTTTTTTTTTTCATAAAA+AGG + chr4_1:67826318-67826337 None:intergenic 10.0%
!! CATTAGAAATATCAAAAAAA+TGG + chr4_1:67821684-67821703 None:intergenic 15.0%
!!! CATTTTTTTGATATTTCTAA+TGG - chr4_1:67821682-67821701 Msa0566690:three_prime_UTR 15.0%
!!! AGATTTTGTATTATTATGAT+AGG - chr4_1:67822432-67822451 Msa0566690:intron 15.0%
!!! TATTGTTTTTTGAAGTTTTT+AGG - chr4_1:67822806-67822825 Msa0566690:intron 15.0%
!!! TAACATTCTAATTTTATACA+AGG + chr4_1:67823009-67823028 None:intergenic 15.0%
!!! ATTTCTTTTTTAGTGAATTA+AGG - chr4_1:67823634-67823653 Msa0566690:intron 15.0%
!!! TTTCTTTTTTAGTGAATTAA+GGG - chr4_1:67823635-67823654 Msa0566690:intron 15.0%
!! TTGAAATATTGAAATAAAGT+TGG + chr4_1:67824560-67824579 None:intergenic 15.0%
!!! ATTATTTTGATTTTTAGACA+TGG + chr4_1:67825638-67825657 None:intergenic 15.0%
!! GATATAAAAAAAGGAAATTA+TGG - chr4_1:67826776-67826795 Msa0566690:intron 15.0%
!! ATAGTTGAAAACAAAAACTA+TGG - chr4_1:67821490-67821509 Msa0566690:three_prime_UTR 20.0%
!! TAGTTGAAAACAAAAACTAT+GGG - chr4_1:67821491-67821510 Msa0566690:three_prime_UTR 20.0%
!! ATCAAAAAAATGGTGAAAAT+CGG + chr4_1:67821674-67821693 None:intergenic 20.0%
!! AGTGTATATTCAATTATTTG+CGG - chr4_1:67822220-67822239 Msa0566690:CDS 20.0%
!!! TTGTATTATGTTGATAGAAT+TGG - chr4_1:67822512-67822531 Msa0566690:intron 20.0%
!! TTGAATATAGAATGTTATGT+TGG - chr4_1:67822752-67822771 Msa0566690:intron 20.0%
!!! AGTCACAGATTTTAAAATTA+AGG + chr4_1:67823052-67823071 None:intergenic 20.0%
!!! ATGAATAAGATCTAAAATCA+TGG + chr4_1:67823259-67823278 None:intergenic 20.0%
!! AAAACCAGAAGATATAATAA+GGG + chr4_1:67824049-67824068 None:intergenic 20.0%
!! TAAAACCAGAAGATATAATA+AGG + chr4_1:67824050-67824069 None:intergenic 20.0%
!!! TATTATATCTTCTGGTTTTA+AGG - chr4_1:67824050-67824069 Msa0566690:intron 20.0%
!! ATAAAATAACAATGTGTCAA+TGG + chr4_1:67825063-67825082 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr4_1:67825296-67825315 None:intergenic 20.0%
!! AGAAAATCACATAAGTATAT+CGG - chr4_1:67825307-67825326 Msa0566690:intron 20.0%
!!! TTTTTTCTTTTACCTTTTTC+TGG - chr4_1:67825595-67825614 Msa0566690:intron 20.0%
!!! TTTTTCTTTTACCTTTTTCT+GGG - chr4_1:67825596-67825615 Msa0566690:intron 20.0%
!! AATCGTAAATTCATTTAATG+TGG + chr4_1:67825882-67825901 None:intergenic 20.0%
!!! ATTAACTCCTTAATTTTACA+CGG + chr4_1:67825978-67825997 None:intergenic 20.0%
!!! TGACAATTTAATCTCTAAAA+AGG - chr4_1:67826028-67826047 Msa0566690:intron 20.0%
!!! AATTTAGTCTTTCAAATTGT+AGG + chr4_1:67826230-67826249 None:intergenic 20.0%
!! GAAAAAAAGAAAAAAAAGGA+TGG + chr4_1:67826395-67826414 None:intergenic 20.0%
!! CACAGAAAAAAAGAAAAAAA+AGG + chr4_1:67826399-67826418 None:intergenic 20.0%
!! TAATGTGTGTTTATAATTTC+TGG - chr4_1:67826614-67826633 Msa0566690:CDS 20.0%
!! TCTTCTCTTGATATAAAAAA+AGG - chr4_1:67826767-67826786 Msa0566690:intron 20.0%
!!! TTTGATTTTTGACAAAATGT+TGG - chr4_1:67827003-67827022 Msa0566690:five_prime_UTR 20.0%
!!! ATAACATTAAGTACTTTTCT+AGG - chr4_1:67827106-67827125 Msa0566690:five_prime_UTR 20.0%
!!! CACATAATTTTTGCATTTTT+AGG - chr4_1:67827202-67827221 Msa0566690:five_prime_UTR 20.0%
! AAATATACTTTCCTTCTCAA+TGG + chr4_1:67821404-67821423 None:intergenic 25.0%
!! TTGAGAAGGAAAGTATATTT+AGG - chr4_1:67821404-67821423 Msa0566690:three_prime_UTR 25.0%
! AAAAGAAAGTAAACCCAATT+GGG + chr4_1:67821782-67821801 None:intergenic 25.0%
! AAAAAGAAAGTAAACCCAAT+TGG + chr4_1:67821783-67821802 None:intergenic 25.0%
! AACTAAAAAATATCCCATTC+AGG + chr4_1:67821847-67821866 None:intergenic 25.0%
!!! TAAAAATGTGTTTTTGTTGC+AGG - chr4_1:67821926-67821945 Msa0566690:CDS 25.0%
! AAAAGAAAATAATGATCCTC+AGG + chr4_1:67822252-67822271 None:intergenic 25.0%
!! TGTTGATAGAATTGGAATAA+TGG - chr4_1:67822520-67822539 Msa0566690:intron 25.0%
!! ATAGAATTGGAATAATGGAA+TGG - chr4_1:67822525-67822544 Msa0566690:intron 25.0%
!!! GTTTTATTTATTCAAACCTG+TGG - chr4_1:67822572-67822591 Msa0566690:intron 25.0%
! ATTCTAAACACAAAATGCTT+TGG - chr4_1:67822631-67822650 Msa0566690:intron 25.0%
!! TGTATGCTTGTTAACATTAA+AGG - chr4_1:67823071-67823090 Msa0566690:intron 25.0%
!!! CACAAATTACTAGTTTTAGT+TGG - chr4_1:67823098-67823117 Msa0566690:intron 25.0%
! AGAATTGAATATTACAACCT+TGG + chr4_1:67823312-67823331 None:intergenic 25.0%
! TTCTTTGGCATAATCATTTA+AGG - chr4_1:67823511-67823530 Msa0566690:intron 25.0%
! ATAATCATTTAAGGAGTTTG+TGG - chr4_1:67823520-67823539 Msa0566690:intron 25.0%
! GACATTGAACAAAAAATGTT+CGG + chr4_1:67823589-67823608 None:intergenic 25.0%
! GTTTATTCATGACAGAAAAT+GGG + chr4_1:67823972-67823991 None:intergenic 25.0%
! TGTTTATTCATGACAGAAAA+TGG + chr4_1:67823973-67823992 None:intergenic 25.0%
!!! ATTTTGTTGCTTTTCCTTTT+TGG - chr4_1:67824078-67824097 Msa0566690:intron 25.0%
!!! TTTTGTTGCTTTTCCTTTTT+GGG - chr4_1:67824079-67824098 Msa0566690:intron 25.0%
! ATGATTTCTTTAGTAGATGA+AGG + chr4_1:67824270-67824289 None:intergenic 25.0%
!!! ATTTTGGTCATTGAATCAAT+AGG - chr4_1:67824316-67824335 Msa0566690:intron 25.0%
! AACTTGTAAATCTCAATCTT+TGG - chr4_1:67824652-67824671 Msa0566690:intron 25.0%
! AGATCATAAATCAAAGATCT+GGG + chr4_1:67824729-67824748 None:intergenic 25.0%
! AAGATCATAAATCAAAGATC+TGG + chr4_1:67824730-67824749 None:intergenic 25.0%
! ATCATTAAGAACATGAAAAG+TGG + chr4_1:67824769-67824788 None:intergenic 25.0%
! TGAAATGAAAAGGACAAAAT+GGG + chr4_1:67824810-67824829 None:intergenic 25.0%
!!! CACTATATTCTGAAATGAAA+AGG + chr4_1:67824820-67824839 None:intergenic 25.0%
!!! CCTCATTATTTTAAATCATG+TGG + chr4_1:67825112-67825131 None:intergenic 25.0%
!! CCACATGATTTAAAATAATG+AGG - chr4_1:67825109-67825128 Msa0566690:intron 25.0%
!!! AATAATGAGGTGTTAGTTTT+TGG - chr4_1:67825122-67825141 Msa0566690:intron 25.0%
!!! ATATGTTTATTGGTTTGATC+TGG - chr4_1:67825427-67825446 Msa0566690:intron 25.0%
!!! CTTTTTTTCTTTTCACTTCT+TGG - chr4_1:67825458-67825477 Msa0566690:intron 25.0%
!!! ATCAACACCTGAATTTTTTA+CGG - chr4_1:67825567-67825586 Msa0566690:intron 25.0%
!! AATAATAATCTCTTTTGACC+TGG - chr4_1:67825652-67825671 Msa0566690:intron 25.0%
! ACTTATGATGTTGGATAAAA+CGG - chr4_1:67825691-67825710 Msa0566690:intron 25.0%
! AAGTAAAAAAACTACATCCA+GGG + chr4_1:67825814-67825833 None:intergenic 25.0%
! AAAGTAAAAAAACTACATCC+AGG + chr4_1:67825815-67825834 None:intergenic 25.0%
! TTTGCTTATCATTTGTGATT+TGG - chr4_1:67825837-67825856 Msa0566690:intron 25.0%
! TTGCTTATCATTTGTGATTT+GGG - chr4_1:67825838-67825857 Msa0566690:intron 25.0%
! ATGCATGTTAACAAACTAAA+TGG - chr4_1:67825904-67825923 Msa0566690:intron 25.0%
!! AATATCATGTTTTCAAACCA+AGG + chr4_1:67825951-67825970 None:intergenic 25.0%
!! TTGGTTTGAAAACATGATAT+TGG - chr4_1:67825950-67825969 Msa0566690:intron 25.0%
! AATTTAGTCTCTGTAATGAT+AGG - chr4_1:67826002-67826021 Msa0566690:intron 25.0%
! ATTTAGTCTCTGTAATGATA+GGG - chr4_1:67826003-67826022 Msa0566690:intron 25.0%
! TATAATCCTTCAAATTGTCT+TGG + chr4_1:67826114-67826133 None:intergenic 25.0%
!! ATTGACTCAAAAGACTAATT+TGG - chr4_1:67826133-67826152 Msa0566690:intron 25.0%
!! GATTGATGATTTGAATTTCT+TGG - chr4_1:67826160-67826179 Msa0566690:intron 25.0%
! CACTCAAAATTTAGATAACT+AGG - chr4_1:67826257-67826276 Msa0566690:intron 25.0%
! AAAAAAAAAAACTTTCTCCC+AGG - chr4_1:67826325-67826344 Msa0566690:CDS 25.0%
! TTAAGAACAGTAAGAAACTA+TGG + chr4_1:67826361-67826380 None:intergenic 25.0%
! AAAAAAAGGAAATTATGGTC+TGG - chr4_1:67826781-67826800 Msa0566690:intron 25.0%
!!! TGCATTTTTTCATTTGTTGT+TGG - chr4_1:67827076-67827095 Msa0566690:five_prime_UTR 25.0%
!!! GCATTTTTTCATTTGTTGTT+GGG - chr4_1:67827077-67827096 Msa0566690:five_prime_UTR 25.0%
AAAATGGTGAAAATCGGAAA+TGG + chr4_1:67821668-67821687 None:intergenic 30.0%
AATAGAAATGGAGTGAGAAA+AGG + chr4_1:67821757-67821776 None:intergenic 30.0%
TCCATTTCTATTTACCCAAT+TGG - chr4_1:67821765-67821784 Msa0566690:three_prime_UTR 30.0%
CCATTTCTATTTACCCAATT+GGG - chr4_1:67821766-67821785 Msa0566690:three_prime_UTR 30.0%
TGATATTGAGATATCCGAAT+TGG - chr4_1:67821887-67821906 Msa0566690:three_prime_UTR 30.0%
GATATTGAGATATCCGAATT+GGG - chr4_1:67821888-67821907 Msa0566690:three_prime_UTR 30.0%
AATTCAACACAAACCCAATT+CGG + chr4_1:67821904-67821923 None:intergenic 30.0%
ACACTAGGAACAATAAAACA+AGG + chr4_1:67821985-67822004 None:intergenic 30.0%
!! TTGTTTTATTGTTCCTAGTG+TGG - chr4_1:67821984-67822003 Msa0566690:CDS 30.0%
! GAAGTTCTTCTAAAGGAAAT+TGG - chr4_1:67822040-67822059 Msa0566690:intron 30.0%
GCTGATCTTGATTTCTTTAT+TGG - chr4_1:67822090-67822109 Msa0566690:intron 30.0%
TATCAACATAATACAACAGC+CGG + chr4_1:67822508-67822527 None:intergenic 30.0%
! TTGGAATAATGGAATGGAAT+TGG - chr4_1:67822531-67822550 Msa0566690:intron 30.0%
! AATAATGGAATGGAATTGGA+TGG - chr4_1:67822535-67822554 Msa0566690:intron 30.0%
!!! AATTGGATGGTTAGTTTTGA+AGG - chr4_1:67822548-67822567 Msa0566690:intron 30.0%
!!! ATTGGATGGTTAGTTTTGAA+GGG - chr4_1:67822549-67822568 Msa0566690:intron 30.0%
TTGTACAAAAGATTTACCAC+AGG + chr4_1:67822591-67822610 None:intergenic 30.0%
TTTGTAATATTACAAGCGCA+TGG - chr4_1:67822713-67822732 Msa0566690:intron 30.0%
TTGTAATATTACAAGCGCAT+GGG - chr4_1:67822714-67822733 Msa0566690:intron 30.0%
AATTAAGGAACAAGTAGTAG+TGG + chr4_1:67823037-67823056 None:intergenic 30.0%
TAATGCTAATCATGGATGAA+TGG - chr4_1:67823155-67823174 Msa0566690:CDS 30.0%
AATGCTAATCATGGATGAAT+GGG - chr4_1:67823156-67823175 Msa0566690:CDS 30.0%
! CGTTTTGCCATATTAAGTTT+TGG - chr4_1:67823280-67823299 Msa0566690:intron 30.0%
GTCAGTACCAAAACTTAATA+TGG + chr4_1:67823290-67823309 None:intergenic 30.0%
!! ATGTTTACATTGATTTGTGC+AGG - chr4_1:67823371-67823390 Msa0566690:intron 30.0%
GTTCACTGCTTATATTTCTT+TGG - chr4_1:67823496-67823515 Msa0566690:intron 30.0%
AAGCAAAGAAACAAAGCTAT+TGG + chr4_1:67823556-67823575 None:intergenic 30.0%
ATAATTGCTCAATTTCTCTC+AGG - chr4_1:67823702-67823721 Msa0566690:intron 30.0%
TAGCCAATATCACAAGAATA+TGG + chr4_1:67823802-67823821 None:intergenic 30.0%
! GATGATAGAGAAAGTATAAC+GGG + chr4_1:67823860-67823879 None:intergenic 30.0%
! GGATGATAGAGAAAGTATAA+CGG + chr4_1:67823861-67823880 None:intergenic 30.0%
TGAATAAACACCTTTCTTAG+TGG - chr4_1:67823983-67824002 Msa0566690:intron 30.0%
GAATAAACACCTTTCTTAGT+GGG - chr4_1:67823984-67824003 Msa0566690:intron 30.0%
AATAAACACCTTTCTTAGTG+GGG - chr4_1:67823985-67824004 Msa0566690:intron 30.0%
!! AAATCGTTGATAACCCAAAA+AGG + chr4_1:67824095-67824114 None:intergenic 30.0%
AACGATTTCTAAATCCTGAT+AGG - chr4_1:67824107-67824126 Msa0566690:intron 30.0%
ACGATTTCTAAATCCTGATA+GGG - chr4_1:67824108-67824127 Msa0566690:intron 30.0%
ACAGAGATCAATAGCTAATT+GGG + chr4_1:67824231-67824250 None:intergenic 30.0%
TACAGAGATCAATAGCTAAT+TGG + chr4_1:67824232-67824251 None:intergenic 30.0%
!! CATTCCTTGGTGTAATATTT+TGG - chr4_1:67824300-67824319 Msa0566690:intron 30.0%
ATGACCAAAATATTACACCA+AGG + chr4_1:67824307-67824326 None:intergenic 30.0%
GAAAACCTGCAAAAGTAATA+GGG + chr4_1:67824372-67824391 None:intergenic 30.0%
AGAAAACCTGCAAAAGTAAT+AGG + chr4_1:67824373-67824392 None:intergenic 30.0%
CACAAGGAGATCATTATATA+AGG - chr4_1:67824475-67824494 Msa0566690:intron 30.0%
TCACCAATTAAATTGAGATG+AGG + chr4_1:67824508-67824527 None:intergenic 30.0%
TTACAAGTTCTCGAACATTA+AGG + chr4_1:67824641-67824660 None:intergenic 30.0%
GATCATAAATCAAAGATCTG+GGG + chr4_1:67824728-67824747 None:intergenic 30.0%
TTAAGAACATGAAAAGTGGA+GGG + chr4_1:67824765-67824784 None:intergenic 30.0%
ATTAAGAACATGAAAAGTGG+AGG + chr4_1:67824766-67824785 None:intergenic 30.0%
CTGAAATGAAAAGGACAAAA+TGG + chr4_1:67824811-67824830 None:intergenic 30.0%
TTTCAGAATATAGTGTTGTC+AGG - chr4_1:67824825-67824844 Msa0566690:intron 30.0%
!! TCACTTTTATCTCTCCATTA+AGG + chr4_1:67824941-67824960 None:intergenic 30.0%
GTGATCATCAGTTTAAGTAA+AGG + chr4_1:67824977-67824996 None:intergenic 30.0%
TTTGCAATAGCTAAGCTATA+TGG - chr4_1:67825022-67825041 Msa0566690:intron 30.0%
!!! GTGTTAGTTTTTGGTTGATT+CGG - chr4_1:67825131-67825150 Msa0566690:intron 30.0%
TTTCATAAACTATGTAGCAC+TGG + chr4_1:67825395-67825414 None:intergenic 30.0%
AAGCATACCGTAAAAAATTC+AGG + chr4_1:67825577-67825596 None:intergenic 30.0%
!! TATTCTGAGACTTATGATGT+TGG - chr4_1:67825682-67825701 Msa0566690:intron 30.0%
! TAAAACGGTTCTTTAGGTTT+AGG - chr4_1:67825706-67825725 Msa0566690:CDS 30.0%
AACTAAATGGTTACGACTTA+TGG - chr4_1:67825917-67825936 Msa0566690:intron 30.0%
ATTGGATCCGTGTAAAATTA+AGG - chr4_1:67825968-67825987 Msa0566690:intron 30.0%
AAAGGACATCTTAATCTACA+AGG + chr4_1:67826300-67826319 None:intergenic 30.0%
AAGAAAAAAAAGGATGGCAA+CGG + chr4_1:67826389-67826408 None:intergenic 30.0%
!!! TTTTTTCTGTGTTAACTCTC+TGG - chr4_1:67826408-67826427 Msa0566690:CDS 30.0%
AGAACTGCAAGAATTAAAAC+TGG + chr4_1:67826903-67826922 None:intergenic 30.0%
AAGTCATCATGTGGTTAATA+TGG - chr4_1:67826941-67826960 Msa0566690:CDS 30.0%
! TTTGAGATAGAGAAATGCTA+TGG - chr4_1:67827256-67827275 Msa0566690:five_prime_UTR 30.0%
GAAAGAAAGATCCATTGAGA+AGG - chr4_1:67821390-67821409 Msa0566690:three_prime_UTR 35.0%
! TAACGTAAGATAGTGGTTGT+TGG + chr4_1:67821540-67821559 None:intergenic 35.0%
AGACTTTGATCGAAAGTGAA+AGG + chr4_1:67821570-67821589 None:intergenic 35.0%
CCCAATTGGGTAAATAGAAA+TGG + chr4_1:67821769-67821788 None:intergenic 35.0%
! TGTTTGTTGAAATGCCTGAA+TGG - chr4_1:67821830-67821849 Msa0566690:three_prime_UTR 35.0%
! GTTTGTTGAAATGCCTGAAT+GGG - chr4_1:67821831-67821850 Msa0566690:three_prime_UTR 35.0%
TTGTTGCAGGTATACGAAAA+TGG - chr4_1:67821939-67821958 Msa0566690:CDS 35.0%
TGTTGCAGGTATACGAAAAT+GGG - chr4_1:67821940-67821959 Msa0566690:CDS 35.0%
CAATCGAGAAGTTCTTCTAA+AGG - chr4_1:67822033-67822052 Msa0566690:intron 35.0%
!! TTTGAGACTTTTAATGTGCC+TGG - chr4_1:67822327-67822346 Msa0566690:intron 35.0%
GATTTATGAAACTTGCCTAG+CGG - chr4_1:67822472-67822491 Msa0566690:intron 35.0%
!!! TTGGATGGTTAGTTTTGAAG+GGG - chr4_1:67822550-67822569 Msa0566690:intron 35.0%
TCAACAGAGTGATTCACTTT+CGG + chr4_1:67822672-67822691 None:intergenic 35.0%
!! GTTATGTTGGCTTAGCATAT+TGG - chr4_1:67822765-67822784 Msa0566690:intron 35.0%
!! TCTTTTTAGTGTGAGATGAC+AGG - chr4_1:67822841-67822860 Msa0566690:intron 35.0%
CATCAAATCAGTTCCTATTG+CGG - chr4_1:67822936-67822955 Msa0566690:intron 35.0%
ATCAAATCAGTTCCTATTGC+GGG - chr4_1:67822937-67822956 Msa0566690:intron 35.0%
GATTAGCATTAACCAATGCA+TGG + chr4_1:67823146-67823165 None:intergenic 35.0%
!! GCATTGGTTAATGCTAATCA+TGG - chr4_1:67823147-67823166 Msa0566690:CDS 35.0%
ATGCTAATCATGGATGAATG+GGG - chr4_1:67823157-67823176 Msa0566690:CDS 35.0%
!!! TTAAGTTTTGGTACTGACCA+AGG - chr4_1:67823292-67823311 Msa0566690:intron 35.0%
AGGGACGTAAAGTTATCTAT+TGG - chr4_1:67823654-67823673 Msa0566690:intron 35.0%
TCTCCATTGCTTGATATACT+TGG + chr4_1:67823755-67823774 None:intergenic 35.0%
AAGTATATCAAGCAATGGAG+AGG - chr4_1:67823754-67823773 Msa0566690:CDS 35.0%
GCTCCATATTCTTGTGATAT+TGG - chr4_1:67823796-67823815 Msa0566690:CDS 35.0%
TATTCATGACAGAAAATGGG+AGG + chr4_1:67823969-67823988 None:intergenic 35.0%
GGGGATTATCTGTGAAAAAA+TGG - chr4_1:67824004-67824023 Msa0566690:intron 35.0%
CAGAAGATATAATAAGGGCA+AGG + chr4_1:67824044-67824063 None:intergenic 35.0%
CTTGCCCTTATTATATCTTC+TGG - chr4_1:67824042-67824061 Msa0566690:intron 35.0%
CGATTTCTAAATCCTGATAG+GGG - chr4_1:67824109-67824128 Msa0566690:intron 35.0%
TATTGATCTCTGTACTCCTT+AGG - chr4_1:67824238-67824257 Msa0566690:CDS 35.0%
TAGATGAAGGAACAAACCTA+AGG + chr4_1:67824257-67824276 None:intergenic 35.0%
CATGAAAATGTAGCATTCCT+TGG - chr4_1:67824287-67824306 Msa0566690:intron 35.0%
GGTCATTGAATCAATAGGAT+TGG - chr4_1:67824321-67824340 Msa0566690:intron 35.0%
AAAGTAATAGGGTAAACCCA+CGG + chr4_1:67824361-67824380 None:intergenic 35.0%
!! GTTTACCCTATTACTTTTGC+AGG - chr4_1:67824364-67824383 Msa0566690:intron 35.0%
TTGTCTATTACAACAGGCAA+AGG + chr4_1:67824431-67824450 None:intergenic 35.0%
ATGCACTTGTCTATTACAAC+AGG + chr4_1:67824437-67824456 None:intergenic 35.0%
AATGATCTCCTTGTGTCAAT+TGG + chr4_1:67824470-67824489 None:intergenic 35.0%
GCACCTCATCTCAATTTAAT+TGG - chr4_1:67824502-67824521 Msa0566690:intron 35.0%
! CAATGTTCAAGGATTTTCAC+AGG - chr4_1:67824856-67824875 Msa0566690:CDS 35.0%
TAGCTTAGCTATTGCAAACA+AGG + chr4_1:67825020-67825039 None:intergenic 35.0%
TTTGGAAGAAGTTCTCACAT+TGG - chr4_1:67825215-67825234 Msa0566690:CDS 35.0%
TGTTTGTGAACTATGAAGCA+CGG - chr4_1:67825241-67825260 Msa0566690:CDS 35.0%
TCTCAAATTATTAGCGGTGT+CGG + chr4_1:67825290-67825309 None:intergenic 35.0%
CAAACTGCAAATCTTTGGAT+AGG + chr4_1:67825526-67825545 None:intergenic 35.0%
CTATCCAAAGATTTGCAGTT+TGG - chr4_1:67825524-67825543 Msa0566690:intron 35.0%
CAAACCAAACTGCAAATCTT+TGG + chr4_1:67825531-67825550 None:intergenic 35.0%
CAAAGATTTGCAGTTTGGTT+TGG - chr4_1:67825529-67825548 Msa0566690:intron 35.0%
ACAAGTCATAACCCAGAAAA+AGG + chr4_1:67825610-67825629 None:intergenic 35.0%
GTTGGATAAAACGGTTCTTT+AGG - chr4_1:67825700-67825719 Msa0566690:CDS 35.0%
GACTTATGGTATTGTTTCCT+TGG - chr4_1:67825931-67825950 Msa0566690:intron 35.0%
! TGTTAACTCTCTGGTTCATA+GGG - chr4_1:67826417-67826436 Msa0566690:CDS 35.0%
AAGGCAGAATACGAAGAATA+TGG - chr4_1:67826663-67826682 Msa0566690:CDS 35.0%
TAATACATCCCCTTGAAAAC+AGG + chr4_1:67826711-67826730 None:intergenic 35.0%
AAGGGGATGTATTAAAGCAA+AGG - chr4_1:67826717-67826736 Msa0566690:CDS 35.0%
TAATTCTTGCAGTTCTTCCT+AGG - chr4_1:67826907-67826926 Msa0566690:intron 35.0%
ACCACATGATGACTTGAAAT+TGG + chr4_1:67826936-67826955 None:intergenic 35.0%
ATCTACCAATAAGTACCATC+TGG + chr4_1:67826979-67826998 None:intergenic 35.0%
TTAGTGTTCAGCTTAGAGTT+TGG - chr4_1:67827045-67827064 Msa0566690:five_prime_UTR 35.0%
! CATTAAGTACTTTTCTAGGC+AGG - chr4_1:67827110-67827129 Msa0566690:five_prime_UTR 35.0%
AGCGAGTTAACGTAAGATAG+TGG + chr4_1:67821547-67821566 None:intergenic 40.0%
CAGATCCAGTAGAGAGATTT+AGG + chr4_1:67821627-67821646 None:intergenic 40.0%
CAGGCATTTCAACAAACACA+TGG + chr4_1:67821828-67821847 None:intergenic 40.0%
! TATACGAAAATGGGCTTTGC+TGG - chr4_1:67821949-67821968 Msa0566690:CDS 40.0%
TCAACCTGACCATGCTTAAT+CGG + chr4_1:67822168-67822187 None:intergenic 40.0%
TCACTCTGTTGAGTAAGAAC+TGG - chr4_1:67822680-67822699 Msa0566690:intron 40.0%
! ACAGGAGTCGTAGTTGATAT+CGG - chr4_1:67822859-67822878 Msa0566690:intron 40.0%
! TCGTAGTTGATATCGGAGAT+GGG - chr4_1:67822866-67822885 Msa0566690:intron 40.0%
TACACATGTTGTACCAGTTG+CGG - chr4_1:67822891-67822910 Msa0566690:intron 40.0%
ATAACATAACCATCCGCAAC+TGG + chr4_1:67822907-67822926 None:intergenic 40.0%
GTTGCGGATGGTTATGTTAT+TGG - chr4_1:67822907-67822926 Msa0566690:intron 40.0%
! GAAAGTGTGAAACCATGCAT+TGG - chr4_1:67823131-67823150 Msa0566690:CDS 40.0%
CATGAGACAGTTCATGAATC+TGG + chr4_1:67823354-67823373 None:intergenic 40.0%
!! CATTGATTTGTGCAGGAAAG+AGG - chr4_1:67823378-67823397 Msa0566690:intron 40.0%
AACCTTAACTATGTCAGAGC+AGG + chr4_1:67823469-67823488 None:intergenic 40.0%
CATTGCTTGATATACTTGGC+TGG + chr4_1:67823751-67823770 None:intergenic 40.0%
CAGCCAAGTATATCAAGCAA+TGG - chr4_1:67823749-67823768 Msa0566690:CDS 40.0%
ATTGGCTATGAACGCTTTCT+TGG - chr4_1:67823814-67823833 Msa0566690:CDS 40.0%
! ACTTTCTGAGAGATGTGCTA+TGG + chr4_1:67823882-67823901 None:intergenic 40.0%
CACATCTCTCAGAAAGTTCT+GGG - chr4_1:67823885-67823904 Msa0566690:intron 40.0%
ACAGAAAATGGGAGGTAATC+AGG + chr4_1:67823961-67823980 None:intergenic 40.0%
CAGATAATCCCCACTAAGAA+AGG + chr4_1:67823996-67824015 None:intergenic 40.0%
TTCTAAATCCTGATAGGGGA+TGG - chr4_1:67824113-67824132 Msa0566690:intron 40.0%
TCTAAATCCTGATAGGGGAT+GGG - chr4_1:67824114-67824133 Msa0566690:intron 40.0%
ACTACTTGATCAATGATCCC+AGG + chr4_1:67824188-67824207 None:intergenic 40.0%
TTGGGATCATCAAGTCTCTT+AGG + chr4_1:67824213-67824232 None:intergenic 40.0%
TGGTGATTTAAAGATTCCCG+TGG - chr4_1:67824341-67824360 Msa0566690:intron 40.0%
GGTGATTTAAAGATTCCCGT+GGG - chr4_1:67824342-67824361 Msa0566690:intron 40.0%
AAGTAATAGGGTAAACCCAC+GGG + chr4_1:67824360-67824379 None:intergenic 40.0%
AAGTCGCTGCTATATATCTC+GGG + chr4_1:67824401-67824420 None:intergenic 40.0%
GAAGTCGCTGCTATATATCT+CGG + chr4_1:67824402-67824421 None:intergenic 40.0%
TATTACAACAGGCAAAGGAG+TGG + chr4_1:67824426-67824445 None:intergenic 40.0%
CATAAATCAAAGATCTGGGG+TGG + chr4_1:67824725-67824744 None:intergenic 40.0%
AAAATGGGCAAGTCGTAAAG+AGG + chr4_1:67824795-67824814 None:intergenic 40.0%
CAGAATATAGTGTTGTCAGG+AGG - chr4_1:67824828-67824847 Msa0566690:intron 40.0%
AGGAGGATCAACAATGTTCA+AGG - chr4_1:67824845-67824864 Msa0566690:CDS 40.0%
ACAATGTGTCAATGGTTGAC+TGG + chr4_1:67825055-67825074 None:intergenic 40.0%
CTTCCAAACATGTGTACATG+TGG + chr4_1:67825203-67825222 None:intergenic 40.0%
ATGAAGCACGGATACATACA+CGG - chr4_1:67825253-67825272 Msa0566690:CDS 40.0%
!! TAAGTATATCGGTGTCGTGT+CGG - chr4_1:67825318-67825337 Msa0566690:intron 40.0%
CCAATAAACATATAGCTGCG+AGG + chr4_1:67825420-67825439 None:intergenic 40.0%
CCTCGCAGCTATATGTTTAT+TGG - chr4_1:67825417-67825436 Msa0566690:intron 40.0%
CTGCAAATCTTTGGATAGGA+TGG + chr4_1:67825522-67825541 None:intergenic 40.0%
!! AGATTTGCAGTTTGGTTTGG+TGG - chr4_1:67825532-67825551 Msa0566690:intron 40.0%
GTCTCAGAATAAATGTGTCC+AGG + chr4_1:67825673-67825692 None:intergenic 40.0%
TTGTCATGCAATCCATTCAC+CGG + chr4_1:67825789-67825808 None:intergenic 40.0%
CAAATTGTCTTGGAGTTGGA+CGG + chr4_1:67826104-67826123 None:intergenic 40.0%
CCTTCAAATTGTCTTGGAGT+TGG + chr4_1:67826108-67826127 None:intergenic 40.0%
CCAACTCCAAGACAATTTGA+AGG - chr4_1:67826105-67826124 Msa0566690:intron 40.0%
! GTGTTAACTCTCTGGTTCAT+AGG - chr4_1:67826416-67826435 Msa0566690:CDS 40.0%
! GTTAACTCTCTGGTTCATAG+GGG - chr4_1:67826418-67826437 Msa0566690:CDS 40.0%
AGAACCCTAGTTCAATTCCT+GGG + chr4_1:67826509-67826528 None:intergenic 40.0%
GATGGAAACAACCAAGTGAT+GGG + chr4_1:67826577-67826596 None:intergenic 40.0%
CCTTGAAAACAGGATTTGTG+CGG + chr4_1:67826701-67826720 None:intergenic 40.0%
! CGCACAAATCCTGTTTTCAA+GGG - chr4_1:67826699-67826718 Msa0566690:CDS 40.0%
!! GCACAAATCCTGTTTTCAAG+GGG - chr4_1:67826700-67826719 Msa0566690:CDS 40.0%
AAGGATGAATTAGCTGACCA+TGG - chr4_1:67826736-67826755 Msa0566690:intron 40.0%
! TGACTTGAAATTGGCTTCCT+AGG + chr4_1:67826927-67826946 None:intergenic 40.0%
! GCCAATTTCAAGTCATCATG+TGG - chr4_1:67826932-67826951 Msa0566690:intron 40.0%
! AAAATGTTGGCTGAGCTGAA+TGG - chr4_1:67827016-67827035 Msa0566690:five_prime_UTR 40.0%
AGGCAGGAGATTAAATTCGT+TGG - chr4_1:67827126-67827145 Msa0566690:five_prime_UTR 40.0%
GGCAGGAGATTAAATTCGTT+GGG - chr4_1:67827127-67827146 Msa0566690:five_prime_UTR 40.0%
AGGTATCTAATGCACACTTC+AGG - chr4_1:67827222-67827241 Msa0566690:five_prime_UTR 40.0%
GAGATTTAGGCAGAGGATCA+TGG + chr4_1:67821614-67821633 None:intergenic 45.0%
CAGTAGAGAGATTTAGGCAG+AGG + chr4_1:67821621-67821640 None:intergenic 45.0%
CTCTGCCTAAATCTCTCTAC+TGG - chr4_1:67821619-67821638 Msa0566690:three_prime_UTR 45.0%
!! ATGGAGTGAGAAAAGGTACC+CGG + chr4_1:67821750-67821769 None:intergenic 45.0%
TCGTTAATCGCAACCACACT+AGG + chr4_1:67822000-67822019 None:intergenic 45.0%
TGGATTGCTCAGCATAATGC+TGG - chr4_1:67822060-67822079 Msa0566690:intron 45.0%
GGATTGCTCAGCATAATGCT+GGG - chr4_1:67822061-67822080 Msa0566690:intron 45.0%
GATTGCTCAGCATAATGCTG+GGG - chr4_1:67822062-67822081 Msa0566690:intron 45.0%
TCAGCATAATGCTGGGGTTA+TGG - chr4_1:67822068-67822087 Msa0566690:intron 45.0%
CTCACTTACCCGATTAAGCA+TGG - chr4_1:67822156-67822175 Msa0566690:intron 45.0%
TTACCCGATTAAGCATGGTC+AGG - chr4_1:67822161-67822180 Msa0566690:intron 45.0%
CAACCTGACCATGCTTAATC+GGG + chr4_1:67822167-67822186 None:intergenic 45.0%
!! AGCATGGTCAGGTTGAGAAT+TGG - chr4_1:67822172-67822191 Msa0566690:intron 45.0%
!! GCATGGTCAGGTTGAGAATT+GGG - chr4_1:67822173-67822192 Msa0566690:intron 45.0%
TTATTTGCGGTGTGATCCTG+AGG - chr4_1:67822233-67822252 Msa0566690:intron 45.0%
CTGAGAGTCGTGAGTATACT+GGG - chr4_1:67822295-67822314 Msa0566690:intron 45.0%
TGAGAGTCGTGAGTATACTG+GGG - chr4_1:67822296-67822315 Msa0566690:intron 45.0%
TTCACGGCAATGTAAAGTCC+AGG + chr4_1:67822348-67822367 None:intergenic 45.0%
GAGAGCAAGCACAGAATTCA+CGG + chr4_1:67822364-67822383 None:intergenic 45.0%
TGAGTAAGAACTGGTTGCAG+TGG - chr4_1:67822689-67822708 Msa0566690:intron 45.0%
! GTCGTAGTTGATATCGGAGA+TGG - chr4_1:67822865-67822884 Msa0566690:intron 45.0%
! CGTAGTTGATATCGGAGATG+GGG - chr4_1:67822867-67822886 Msa0566690:intron 45.0%
ATCAGTTCCTATTGCGGGAA+AGG - chr4_1:67822942-67822961 Msa0566690:intron 45.0%
GTAACATCCTTTCCCGCAAT+AGG + chr4_1:67822952-67822971 None:intergenic 45.0%
! TTTTCGTCCAGCAGCTAATG+CGG - chr4_1:67822974-67822993 Msa0566690:intron 45.0%
CACCTGCTCTGACATAGTTA+AGG - chr4_1:67823464-67823483 Msa0566690:intron 45.0%
!! AGAGGCGTTAAACCAAAGAC+TGG - chr4_1:67823772-67823791 Msa0566690:CDS 45.0%
! GAGGCGTTAAACCAAAGACT+GGG - chr4_1:67823773-67823792 Msa0566690:CDS 45.0%
AGGCGTTAAACCAAAGACTG+GGG - chr4_1:67823774-67823793 Msa0566690:CDS 45.0%
GCACATCTCTCAGAAAGTTC+TGG - chr4_1:67823884-67823903 Msa0566690:intron 45.0%
! CGAAGTGCGTTTTCTGTTGT+TGG - chr4_1:67824675-67824694 Msa0566690:intron 45.0%
CCAAACATGTGTACATGTGG+AGG + chr4_1:67825200-67825219 None:intergenic 45.0%
CCTCCACATGTACACATGTT+TGG - chr4_1:67825197-67825216 Msa0566690:intron 45.0%
TAGATTATGTCTTGCTCCCG+AGG - chr4_1:67825758-67825777 Msa0566690:CDS 45.0%
ACTATGGACTCTGTCTTCCT+GGG + chr4_1:67826345-67826364 None:intergenic 45.0%
AACTATGGACTCTGTCTTCC+TGG + chr4_1:67826346-67826365 None:intergenic 45.0%
! TCTCTGGTTCATAGGGGAAA+GGG - chr4_1:67826424-67826443 Msa0566690:CDS 45.0%
AGCCGAACTCCAGATTACTA+GGG + chr4_1:67826451-67826470 None:intergenic 45.0%
TTCCACCCAGGAATTGAACT+AGG - chr4_1:67826501-67826520 Msa0566690:CDS 45.0%
TCCACCCAGGAATTGAACTA+GGG - chr4_1:67826502-67826521 Msa0566690:CDS 45.0%
GAGAACCCTAGTTCAATTCC+TGG + chr4_1:67826510-67826529 None:intergenic 45.0%
GGTTAATGAGCTCCACCAAT+GGG + chr4_1:67826547-67826566 None:intergenic 45.0%
TGGTTAATGAGCTCCACCAA+TGG + chr4_1:67826548-67826567 None:intergenic 45.0%
GGATGGAAACAACCAAGTGA+TGG + chr4_1:67826578-67826597 None:intergenic 45.0%
! TGGTTGTTTCCATCCGTTCT+TGG - chr4_1:67826583-67826602 Msa0566690:CDS 45.0%
!! CATTAGCTCTGCACCAAGAA+CGG + chr4_1:67826599-67826618 None:intergenic 45.0%
TGTGCAGGCTTGTCATACAA+AGG - chr4_1:67826644-67826663 Msa0566690:CDS 45.0%
! CCGCACAAATCCTGTTTTCA+AGG - chr4_1:67826698-67826717 Msa0566690:CDS 45.0%
AAGAGAAGAGACTGCATCCA+TGG + chr4_1:67826756-67826775 None:intergenic 45.0%
AGAGACTGTGAGATGAAACG+AGG + chr4_1:67826817-67826836 None:intergenic 45.0%
AGTCTCTCTTCCAATCTTCC+AGG - chr4_1:67826830-67826849 Msa0566690:intron 45.0%
GTCTCTCTTCCAATCTTCCA+GGG - chr4_1:67826831-67826850 Msa0566690:intron 45.0%
! ATTTTACACCTCTGCTACCC+TGG + chr4_1:67826851-67826870 None:intergenic 45.0%
TGGTTAATATGGTTGCCAGC+AGG - chr4_1:67826952-67826971 Msa0566690:CDS 45.0%
CAGGTCCAGATGGTACTTAT+TGG - chr4_1:67826971-67826990 Msa0566690:exon 45.0%
!!! TATTTTTTAGTTTTTTTTAT+TGG - chr4_1:67821855-67821874 Msa0566690:three_prime_UTR 5.0%
CCATTGTCGATGACAACAGC+AGG + chr4_1:67821725-67821744 None:intergenic 50.0%
CCTGCTGTTGTCATCGACAA+TGG - chr4_1:67821722-67821741 Msa0566690:three_prime_UTR 50.0%
GTTGTCATCGACAATGGCTC+CGG - chr4_1:67821728-67821747 Msa0566690:three_prime_UTR 50.0%
TTGTCATCGACAATGGCTCC+GGG - chr4_1:67821729-67821748 Msa0566690:three_prime_UTR 50.0%
GGTTGAGAATTGGGATGCCA+TGG - chr4_1:67822182-67822201 Msa0566690:intron 50.0%
CCAGTATACTCACGACTCTC+AGG + chr4_1:67822297-67822316 None:intergenic 50.0%
CCTGAGAGTCGTGAGTATAC+TGG - chr4_1:67822294-67822313 Msa0566690:intron 50.0%
! TGCTGGCTACACTACGTCTA+AGG - chr4_1:67822386-67822405 Msa0566690:intron 50.0%
CATGTTGTACCAGTTGCGGA+TGG - chr4_1:67822895-67822914 Msa0566690:intron 50.0%
TTTCGTCCAGCAGCTAATGC+GGG - chr4_1:67822975-67822994 Msa0566690:intron 50.0%
ACTTCGAACGAGTCTTCTGG+TGG + chr4_1:67823414-67823433 None:intergenic 50.0%
ACCAGAAGACTCGTTCGAAG+TGG - chr4_1:67823413-67823432 Msa0566690:intron 50.0%
AAGACTCGTTCGAAGTGGCT+CGG - chr4_1:67823418-67823437 Msa0566690:intron 50.0%
GAATATGGAGCCCCAGTCTT+TGG + chr4_1:67823787-67823806 None:intergenic 50.0%
! TGGCCCTGAGGTTTGTTCTT+TGG - chr4_1:67823834-67823853 Msa0566690:CDS 50.0%
GGGCCAAAGAACAAACCTCA+GGG + chr4_1:67823840-67823859 None:intergenic 50.0%
ATCCTGATAGGGGATGGGAA+AGG - chr4_1:67824119-67824138 Msa0566690:intron 50.0%
TCCTGATAGGGGATGGGAAA+GGG - chr4_1:67824120-67824139 Msa0566690:intron 50.0%
GGAAAGGGATGCTTAAGTGC+AGG - chr4_1:67824135-67824154 Msa0566690:intron 50.0%
AAGTGCAGGCAATGCACATC+CGG - chr4_1:67824149-67824168 Msa0566690:intron 50.0%
AGTCTGCGCCAATTGACACA+AGG - chr4_1:67824459-67824478 Msa0566690:intron 50.0%
! GTTTTCTGTTGTTGGCCCAG+AGG - chr4_1:67824683-67824702 Msa0566690:intron 50.0%
CTTCCGACTGATAAGCCTCT+GGG + chr4_1:67824701-67824720 None:intergenic 50.0%
TCTTCCGACTGATAAGCCTC+TGG + chr4_1:67824702-67824721 None:intergenic 50.0%
!! TATGTAGCACTGGCACTCCT+CGG + chr4_1:67825385-67825404 None:intergenic 50.0%
CTGAGTACATTGACCTCGAC+TGG + chr4_1:67825499-67825518 None:intergenic 50.0%
TGGATTGCATGACAATGCCC+TGG - chr4_1:67825794-67825813 Msa0566690:CDS 50.0%
! CTCTCTGGTTCATAGGGGAA+AGG - chr4_1:67826423-67826442 Msa0566690:CDS 50.0%
! CTCTGGTTCATAGGGGAAAG+GGG - chr4_1:67826425-67826444 Msa0566690:CDS 50.0%
! GGCCCTAGTAATCTGGAGTT+CGG - chr4_1:67826446-67826465 Msa0566690:CDS 50.0%
CAGCCGAACTCCAGATTACT+AGG + chr4_1:67826452-67826471 None:intergenic 50.0%
! TAATCTGGAGTTCGGCTGTG+TGG - chr4_1:67826454-67826473 Msa0566690:CDS 50.0%
GCTGTGTGGTAAGTAAAGCC+TGG - chr4_1:67826468-67826487 Msa0566690:CDS 50.0%
TTCCTGGGTGGAACAGTTCT+TGG + chr4_1:67826494-67826513 None:intergenic 50.0%
ACCCTAGTTCAATTCCTGGG+TGG + chr4_1:67826506-67826525 None:intergenic 50.0%
AACCACTTGAGCCCATCACT+TGG - chr4_1:67826563-67826582 Msa0566690:CDS 50.0%
!! AACCAAGTGATGGGCTCAAG+TGG + chr4_1:67826568-67826587 None:intergenic 50.0%
!! ATTTCTGGCTCGCAATGTGC+AGG - chr4_1:67826629-67826648 Msa0566690:CDS 50.0%
TAAGTACCATCTGGACCTGC+TGG + chr4_1:67826970-67826989 None:intergenic 50.0%
! GGGATGCCATGGAGCGATTT+TGG - chr4_1:67822193-67822212 Msa0566690:intron 55.0%
CTGCTGCCAAAATCGCTCCA+TGG + chr4_1:67822202-67822221 None:intergenic 55.0%
TACCTACCCGCATTAGCTGC+TGG + chr4_1:67822984-67823003 None:intergenic 55.0%
GCCACTTCGAACGAGTCTTC+TGG + chr4_1:67823417-67823436 None:intergenic 55.0%
! CGAAGTGGCTCGGAAAGTGA+AGG - chr4_1:67823428-67823447 Msa0566690:intron 55.0%
TGAACGCTTTCTTGGCCCTG+AGG - chr4_1:67823822-67823841 Msa0566690:CDS 55.0%
CGGGCCAAAGAACAAACCTC+AGG + chr4_1:67823841-67823860 None:intergenic 55.0%
TCCCTTTCCCATCCCCTATC+AGG + chr4_1:67824124-67824143 None:intergenic 55.0%
AGTGCAGGCAATGCACATCC+GGG - chr4_1:67824150-67824169 Msa0566690:intron 55.0%
AGGCAATGCACATCCGGGTT+GGG - chr4_1:67824155-67824174 Msa0566690:intron 55.0%
! ATGCACATCCGGGTTGGGAT+TGG - chr4_1:67824160-67824179 Msa0566690:intron 55.0%
TGGCCCAGAGGCTTATCAGT+CGG - chr4_1:67824695-67824714 Msa0566690:intron 55.0%
!! ATATCGGTGTCGTGTCGGAG+TGG - chr4_1:67825323-67825342 Msa0566690:intron 55.0%
!! TATCGGTGTCGTGTCGGAGT+GGG - chr4_1:67825324-67825343 Msa0566690:intron 55.0%
ACCAGGACACGTCTAATCCG+AGG - chr4_1:67825365-67825384 Msa0566690:intron 55.0%
! TCCTCGGATTAGACGTGTCC+TGG + chr4_1:67825369-67825388 None:intergenic 55.0%
TCCACAGTCACATCCAGTCG+AGG - chr4_1:67825483-67825502 Msa0566690:intron 55.0%
ACCTCGACTGGATGTGACTG+TGG + chr4_1:67825487-67825506 None:intergenic 55.0%
TCCATTCACCGGTGCTTCCT+CGG + chr4_1:67825778-67825797 None:intergenic 55.0%
GGAAAGGGGCCCTAGTAATC+TGG - chr4_1:67826439-67826458 Msa0566690:CDS 55.0%
CTCTCGAACGATTCGCCCAT+TGG - chr4_1:67826529-67826548 Msa0566690:CDS 55.0%
TCGAACGATTCGCCCATTGG+TGG - chr4_1:67826532-67826551 Msa0566690:CDS 55.0%
AGCTCTGCACCAAGAACGGA+TGG + chr4_1:67826595-67826614 None:intergenic 55.0%
CCTCTGCTACCCTGGAAGAT+TGG + chr4_1:67826843-67826862 None:intergenic 55.0%
CCAATCTTCCAGGGTAGCAG+AGG - chr4_1:67826840-67826859 Msa0566690:intron 55.0%
CAGCAGGACGAGAAGCAGCT+GGG + chr4_1:67821709-67821728 None:intergenic 60.0%
ACAGCAGGACGAGAAGCAGC+TGG + chr4_1:67821710-67821729 None:intergenic 60.0%
! AGGCGCTGTCAACGGACTCT+CGG + chr4_1:67822277-67822296 None:intergenic 60.0%
! CGACTCTCAGGCGCTGTCAA+CGG + chr4_1:67822285-67822304 None:intergenic 60.0%
TCTGTGCTTGCTCTCGCTGC+TGG - chr4_1:67822369-67822388 Msa0566690:intron 60.0%
GCCTAGCGGAAAGATGCTGC+CGG - chr4_1:67822486-67822505 Msa0566690:intron 60.0%
GTCCAGCAGCTAATGCGGGT+AGG - chr4_1:67822979-67822998 Msa0566690:intron 60.0%
CAGGCAATGCACATCCGGGT+TGG - chr4_1:67824154-67824173 Msa0566690:intron 60.0%
! TCCGGGTTGGGATTGGAACC+TGG - chr4_1:67824167-67824186 Msa0566690:intron 60.0%
CCCAGGTTCCAATCCCAACC+CGG + chr4_1:67824171-67824190 None:intergenic 60.0%
! CCGGGTTGGGATTGGAACCT+GGG - chr4_1:67824168-67824187 Msa0566690:intron 60.0%
TAAGGCGCGCTTCAGCTGCA+AGG + chr4_1:67824923-67824942 None:intergenic 60.0%
GCAGCTGAAGCGCGCCTTAA+TGG - chr4_1:67824924-67824943 Msa0566690:CDS 60.0%
CACGACACGTGTCTGACACC+AGG - chr4_1:67825348-67825367 Msa0566690:intron 60.0%
! TCTTGCTCCCGAGGAAGCAC+CGG - chr4_1:67825767-67825786 Msa0566690:CDS 60.0%
CCATTCACCGGTGCTTCCTC+GGG + chr4_1:67825777-67825796 None:intergenic 60.0%
GGGTGGAACAGTTCTTGGCC+AGG + chr4_1:67826489-67826508 None:intergenic 60.0%
GGCCAAGAACTGTTCCACCC+AGG - chr4_1:67826489-67826508 Msa0566690:CDS 60.0%
TGGTTGCCAGCAGGTCCAGA+TGG - chr4_1:67826961-67826980 Msa0566690:CDS 60.0%
GCCGGCAGCATCTTTCCGCT+AGG + chr4_1:67822490-67822509 None:intergenic 65.0%
!! CCCGAGGAAGCACCGGTGAA+TGG - chr4_1:67825774-67825793 Msa0566690:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67821386 67827302 67821386 ID=Msa0566690;Name=Msa0566690
chr4_1 mRNA 67821386 67827302 67821386 ID=Msa0566690-mRNA-1;Parent=Msa0566690;Name=Msa0566690-mRNA-1;_AED=0.05;_eAED=0.05;_QI=315|0.77|0.9|0.9|1|1|10|525|456
chr4_1 exon 67821386 67822037 67821386 ID=Msa0566690-mRNA-1:exon:22308;Parent=Msa0566690-mRNA-1
chr4_1 exon 67822213 67822250 67822213 ID=Msa0566690-mRNA-1:exon:22307;Parent=Msa0566690-mRNA-1
chr4_1 exon 67823100 67823198 67823100 ID=Msa0566690-mRNA-1:exon:22306;Parent=Msa0566690-mRNA-1
chr4_1 exon 67823732 67823857 67823732 ID=Msa0566690-mRNA-1:exon:22305;Parent=Msa0566690-mRNA-1
chr4_1 exon 67824192 67824302 67824192 ID=Msa0566690-mRNA-1:exon:22304;Parent=Msa0566690-mRNA-1
chr4_1 exon 67824845 67824964 67824845 ID=Msa0566690-mRNA-1:exon:22303;Parent=Msa0566690-mRNA-1
chr4_1 exon 67825203 67825295 67825203 ID=Msa0566690-mRNA-1:exon:22302;Parent=Msa0566690-mRNA-1
chr4_1 exon 67825692 67825838 67825692 ID=Msa0566690-mRNA-1:exon:22301;Parent=Msa0566690-mRNA-1
chr4_1 exon 67826281 67826740 67826281 ID=Msa0566690-mRNA-1:exon:22300;Parent=Msa0566690-mRNA-1
chr4_1 exon 67826938 67827302 67826938 ID=Msa0566690-mRNA-1:exon:22299;Parent=Msa0566690-mRNA-1
chr4_1 five_prime_UTR 67826988 67827302 67826988 ID=Msa0566690-mRNA-1:five_prime_utr;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67826938 67826987 67826938 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67826281 67826740 67826281 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67825692 67825838 67825692 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67825203 67825295 67825203 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67824845 67824964 67824845 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67824192 67824302 67824192 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67823732 67823857 67823732 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67823100 67823198 67823100 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67822213 67822250 67822213 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 CDS 67821911 67822037 67821911 ID=Msa0566690-mRNA-1:cds;Parent=Msa0566690-mRNA-1
chr4_1 three_prime_UTR 67821386 67821910 67821386 ID=Msa0566690-mRNA-1:three_prime_utr;Parent=Msa0566690-mRNA-1
Gene Sequence

>Msa0566690

ATGGACCCAGCTGCTTCTCGTCCTGCTGTTGTCATCGACAATGGCTCCGGGTATACGAAAATGGGCTTTGCTGGTAATGTTGAACCTTGTTTTATTGTTCCTAGTGTGGTTGCGATTAACGAGTCGTTTCTGAATCAATCGAGAAGTTCTTCTAAAGGAAATTGGATTGCTCAGCATAATGCTGGGGTTATGGCTGATCTTGATTTCTTTATTGGAGATGATGCTCTTTCTAAGTCTCGATCTAGTAGTACTTATAATCTCACTTACCCGATTAAGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGATTTTGGCAGCAGTGTATATTCAATTATTTGCGGTGTGATCCTGAGGATCATTATTTTCTTTTGACCGAGAGTCCGTTGACAGCGCCTGAGAGTCGTGAGTATACTGGGGAAATTATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCCGTGAATTCTGTGCTTGCTCTCGCTGCTGGCTACACTACGTCTAAGTGTGAGATGACAGGAGTCGTAGTTGATATCGGAGATGGGGCTACACATGTTGTACCAGTTGCGGATGGTTATGTTATTGGAAGTAGCATCAAATCAGTTCCTATTGCGGGAAAGGATGTTACTCTTTTCGTCCAGCAGCTAATGCGGGAAAGAGGAGAGAATATACCACCAGAAGACTCGTTCGAAGTGGCTCGGAAAGTGAAGGAAATGCATTGCTACACCTGCTCTGACATAGTTAAGGAATATAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGAGAGGCGTTAAACCAAAGACTGGGGCTCCATATTCTTGTGATATTGGCTATGAACGCTTTCTTGGCCCTGAGGTTTTCTTTAATCCCGAGATATATAGCAGCGACTTCACCACTCCTTTGCCTGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATATAAGAATATAGTGTTGTCAGGAGGATCAACAATGTTCAAGGATTTTCACAGGAGATTACAACGTGATATAAAGAAAATAGTTGATGCTCGTGTCCTTGCAGCTGAAGCGCGCCTTAATGGAGAGATAAAATCACATCCAGTCGAGGTCAATGTACTCAGCCATCCTATCCAAAGATTTGCAGTTTGGTTTGGTGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGGGAAAGGGGCCCTAGTAATCTGGAGTTCGGCTGTGTGGCTTGTCATACAAAGGCAGAATACGAAGAATATGGAGCAAGCATTTGCCGCACAAATCCTGTTTTCAAGGGGATGTATTAAAGCAAAGGATGAATTAGCTGACCATGGATGCAGTCTCTTCTCTTGA
Protein sequence

>Msa0566690

MDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPSVVAINESFLNQSRSSSKGNWIAQHNAGVMADLDFFIGDDALSKSRSSSTYNLTYPIKHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENIPPEDSFEVARKVKEMHCYTCSDIVKEYNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDIKKIVDARVLAAEARLNGEIKSHPVEVNVLSHPIQRFAVWFGGSVLASTPEFFTGKGALVIWSSAVWLVIQRQNTKNMEQAFAAQILFSRGCIKAKDELADHGCSLFS*