AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0541850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0541850 MtrunA17_Chr8g0381261 100.000 428 0 0 1 428 1 428 0.0 895
Msa0541850 MtrunA17_Chr2g0278591 34.550 411 219 8 10 418 10 372 1.33e-74 238
Msa0541850 MtrunA17_Chr7g0223901 34.550 411 219 8 10 418 10 372 1.65e-72 232
Msa0541850 MtrunA17_Chr3g0129641 34.474 409 222 8 10 418 10 372 3.77e-72 231
Msa0541850 MtrunA17_Chr2g0328091 34.550 411 219 8 10 418 10 372 4.87e-72 231
Msa0541850 MtrunA17_Chr6g0448881 34.063 411 221 8 10 418 10 372 5.84e-72 231
Msa0541850 MtrunA17_Chr7g0258721 34.845 419 207 10 10 418 10 372 8.50e-72 230
Msa0541850 MtrunA17_Chr1g0175391 34.550 411 219 8 10 418 10 372 1.26e-71 230
Msa0541850 MtrunA17_Chr7g0224401 32.048 415 242 11 6 416 3 381 4.44e-60 200
Msa0541850 MtrunA17_Chr8g0361001 29.103 457 247 13 9 416 9 437 7.72e-48 169
Msa0541850 MtrunA17_Chr5g0427591 29.103 457 247 13 9 416 9 437 1.84e-47 168
Msa0541850 MtrunA17_Chr2g0305361 26.115 471 254 14 4 419 2 433 2.63e-36 138
Msa0541850 MtrunA17_Chr3g0089031 25.728 412 246 13 9 417 3 357 7.80e-25 104
Msa0541850 MtrunA17_Chr3g0111971 25.926 270 173 6 5 267 17 266 9.75e-15 76.6
Msa0541850 MtrunA17_Chr8g0336071 38.000 100 55 2 124 222 2 95 1.74e-14 68.9
Msa0541850 MtrunA17_Chr3g0080021 24.514 257 162 9 110 353 180 417 5.16e-12 67.4
Msa0541850 MtrunA17_Chr8g0369101 23.000 300 190 10 118 412 206 469 9.61e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0541850 AT1G13180.1 87.617 428 52 1 1 428 1 427 0.0 804
Msa0541850 AT2G42100.1 34.634 410 222 9 9 418 10 373 1.53e-73 235
Msa0541850 AT3G53750.1 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT3G53750.2 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT2G37620.1 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT2G37620.3 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT2G37620.2 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT2G37620.4 34.390 410 219 8 10 417 10 371 3.18e-72 232
Msa0541850 AT3G12110.1 34.307 411 220 8 10 418 10 372 3.81e-72 231
Msa0541850 AT5G09810.1 34.550 411 219 8 10 418 10 372 7.98e-72 231
Msa0541850 AT5G59370.2 34.606 419 208 10 10 418 10 372 2.70e-71 229
Msa0541850 AT5G59370.1 34.606 419 208 10 10 418 10 372 2.70e-71 229
Msa0541850 AT3G46520.2 34.606 419 208 10 10 418 10 372 4.28e-71 229
Msa0541850 AT3G46520.1 34.606 419 208 10 10 418 10 372 4.28e-71 229
Msa0541850 AT3G18780.2 33.741 409 225 8 10 418 10 372 5.51e-70 226
Msa0541850 AT3G18780.3 33.741 409 225 8 10 418 10 372 5.51e-70 226
Msa0541850 AT1G49240.1 33.741 409 225 8 10 418 10 372 7.35e-70 226
Msa0541850 AT2G42090.1 31.951 410 224 8 10 417 4 360 2.58e-66 216
Msa0541850 AT3G18780.1 33.504 391 214 8 10 400 10 354 2.87e-66 216
Msa0541850 AT2G42170.1 35.196 358 198 7 64 421 4 327 2.56e-63 207
Msa0541850 AT2G42170.3 35.196 358 198 7 64 421 4 327 2.56e-63 207
Msa0541850 AT3G27000.1 31.667 420 237 11 6 416 3 381 2.52e-60 201
Msa0541850 AT2G42170.4 34.421 337 187 7 64 400 4 306 1.07e-57 192
Msa0541850 AT2G42170.2 34.421 337 187 7 64 400 4 306 1.07e-57 192
Msa0541850 AT1G18450.1 29.451 455 245 12 9 416 9 434 2.74e-49 174
Msa0541850 AT3G33520.1 27.074 458 240 13 10 419 5 416 1.58e-35 136
Msa0541850 AT2G42170.5 31.579 247 143 5 175 421 9 229 1.87e-30 117
Msa0541850 AT3G60830.1 25.962 416 240 13 9 417 3 357 3.99e-25 106
Msa0541850 AT3G12380.1 25.979 281 173 9 10 278 22 279 3.16e-15 78.6
Msa0541850 AT3G12380.2 25.704 284 176 9 10 278 22 285 3.07e-14 75.5
Msa0541850 AT1G73910.1 30.216 139 92 2 9 147 9 142 2.33e-12 64.7
Msa0541850 AT1G73910.2 30.216 139 92 2 9 147 9 142 2.33e-12 64.7

Find 133 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGATCTTGATTTCTTTAT+TGG 0.095428 4_1:-25855872 Msa0541850:CDS
CAGATCCAGTAGAGAGATTT+AGG 0.218576 4_1:+25856346 None:intergenic
GAAGTTCTTCTAAAGGAAAT+TGG 0.220793 4_1:-25855922 Msa0541850:CDS
ACCACATGATGACTTGAAAT+TGG 0.221840 4_1:+25851031 None:intergenic
AAGTCATCATGTGGTTAATA+TGG 0.223085 4_1:-25851023 Msa0541850:three_prime_UTR
GGGATGCCATGGAGCGATTT+TGG 0.248634 4_1:-25855769 Msa0541850:CDS
TTGAGAAGGAAAGTATATTT+AGG 0.249294 4_1:-25856569 Msa0541850:five_prime_UTR
TTGTTGCAGGTATACGAAAA+TGG 0.249521 4_1:-25856023 Msa0541850:intron
GTTGCGGATGGTTATGTTAT+TGG 0.252532 4_1:-25855055 Msa0541850:CDS
GCAGCTGAAGCGCGCCTTAA+TGG 0.265252 4_1:-25853041 Msa0541850:CDS
GAATATGGAGCCCCAGTCTT+TGG 0.285326 4_1:+25854178 None:intergenic
GCTCCATATTCTTGTGATAT+TGG 0.295202 4_1:-25854166 Msa0541850:CDS
TCAACCTGACCATGCTTAAT+CGG 0.327099 4_1:+25855797 None:intergenic
ATTGGCTATGAACGCTTTCT+TGG 0.327285 4_1:-25854148 Msa0541850:CDS
CAAACCAAACTGCAAATCTT+TGG 0.333787 4_1:+25852437 None:intergenic
TATACGAAAATGGGCTTTGC+TGG 0.344789 4_1:-25856013 Msa0541850:CDS
TAGCCAATATCACAAGAATA+TGG 0.346527 4_1:+25854163 None:intergenic
CCTGAGAGTCGTGAGTATAC+TGG 0.349298 4_1:-25855668 Msa0541850:CDS
CTATCCAAAGATTTGCAGTT+TGG 0.357424 4_1:-25852441 Msa0541850:CDS
AAGGCAGAATACGAAGAATA+TGG 0.364575 4_1:-25851301 Msa0541850:CDS
CACAAGGAGATCATTATATA+AGG 0.369729 4_1:-25853490 Msa0541850:intron
AGCATGGTCAGGTTGAGAAT+TGG 0.376747 4_1:-25855790 Msa0541850:CDS
GCCACTTCGAACGAGTCTTC+TGG 0.379121 4_1:+25854548 None:intergenic
TCAGCATAATGCTGGGGTTA+TGG 0.382607 4_1:-25855894 Msa0541850:CDS
TAATACATCCCCTTGAAAAC+AGG 0.382856 4_1:+25851256 None:intergenic
ATCAAATCAGTTCCTATTGC+GGG 0.386908 4_1:-25855025 Msa0541850:CDS
GCATGGTCAGGTTGAGAATT+GGG 0.389411 4_1:-25855789 Msa0541850:CDS
CAAAGATTTGCAGTTTGGTT+TGG 0.389429 4_1:-25852436 Msa0541850:CDS
TGACTTGAAATTGGCTTCCT+AGG 0.399595 4_1:+25851040 None:intergenic
TCTCCATTGCTTGATATACT+TGG 0.404016 4_1:+25854210 None:intergenic
TCTGTGCTTGCTCTCGCTGC+TGG 0.404421 4_1:-25855593 Msa0541850:CDS
CAGGTCCAGATGGTACTTAT+TGG 0.404569 4_1:-25850993 Msa0541850:three_prime_UTR
TGTTGCAGGTATACGAAAAT+GGG 0.405987 4_1:-25856022 Msa0541850:intron
AGGTATGTAATGCACACTTC+AGG 0.406668 4_1:-25850742 Msa0541850:three_prime_UTR
AGAACTGCAAGAATTAAAAC+TGG 0.407258 4_1:+25851064 None:intergenic
AGTCTCTCTTCCAATCTTCC+AGG 0.411218 4_1:-25851134 Msa0541850:three_prime_UTR
CTTCTGCTACCCTGGAAGAT+TGG 0.418930 4_1:+25851124 None:intergenic
AAAATGGTGAAAATCGGAAA+TGG 0.421533 4_1:+25856305 None:intergenic
TTTCAGAATATAGTGTTGTC+AGG 0.422885 4_1:-25853140 Msa0541850:intron
CATTGCTTGATATACTTGGC+TGG 0.423106 4_1:+25854214 None:intergenic
AATGATCTCCTTGTGTCAAT+TGG 0.425483 4_1:+25853498 None:intergenic
TTAGTGTTCAGCTTAGAGTT+TGG 0.425924 4_1:-25850919 Msa0541850:three_prime_UTR
TGCTGGCTACACTACGTCTA+AGG 0.427772 4_1:-25855576 Msa0541850:intron
AAATATACTTTCCTTCTCAA+TGG 0.428046 4_1:+25856572 None:intergenic
GGCAGGAGATTAAATTCGTT+GGG 0.432100 4_1:-25850837 Msa0541850:three_prime_UTR
AGATTTGCAGTTTGGTTTGG+TGG 0.432383 4_1:-25852433 Msa0541850:CDS
CTGAGAGTCGTGAGTATACT+GGG 0.432628 4_1:-25855667 Msa0541850:CDS
ACAGGAGTCGTAGTTGATAT+CGG 0.443109 4_1:-25855103 Msa0541850:CDS
CTCTGCCTAAATCTCTCTAC+TGG 0.445890 4_1:-25856351 Msa0541850:five_prime_UTR
TAATTCTTGCAGTTCTTCCT+AGG 0.454993 4_1:-25851057 Msa0541850:three_prime_UTR
TCGTTAATCGCAACCACACT+AGG 0.456949 4_1:+25855965 None:intergenic
CATTGATTTGTGCAGGAAAG+AGG 0.458746 4_1:-25854584 Msa0541850:intron
TGGATTGCTCAGCATAATGC+TGG 0.465247 4_1:-25855902 Msa0541850:CDS
GTAACATCCTTTCCCGCAAT+AGG 0.466496 4_1:+25855013 None:intergenic
GTTGTCATCGACAATGGCTC+CGG 0.466593 4_1:-25856242 Msa0541850:CDS
CACCTGCTCTGACATAGTTA+AGG 0.470644 4_1:-25854498 Msa0541850:intron
ATCAGTTCCTATTGCGGGAA+AGG 0.476954 4_1:-25855020 Msa0541850:CDS
CCAGTATACTCACGACTCTC+AGG 0.480188 4_1:+25855668 None:intergenic
AGGCAGGAGATTAAATTCGT+TGG 0.485679 4_1:-25850838 Msa0541850:three_prime_UTR
CAACCTGACCATGCTTAATC+GGG 0.487813 4_1:+25855798 None:intergenic
GAGAGCAAGCACAGAATTCA+CGG 0.488016 4_1:+25855601 None:intergenic
CTGCAAATCTTTGGATAGGA+TGG 0.489552 4_1:+25852446 None:intergenic
ATCTACCAATAAGTACCATC+TGG 0.490428 4_1:+25850988 None:intergenic
AAAAGAAAATAATGATCCTC+AGG 0.490852 4_1:+25855713 None:intergenic
ATGCACTTGTCTATTACAAC+AGG 0.494188 4_1:+25853531 None:intergenic
AGGCGCTGTCAACGGACTCT+CGG 0.495487 4_1:+25855688 None:intergenic
CAGTAGAGAGATTTAGGCAG+AGG 0.498285 4_1:+25856352 None:intergenic
ATAACATAACCATCCGCAAC+TGG 0.499019 4_1:+25855058 None:intergenic
TAACGTAAGATAGTGGTTGT+TGG 0.499157 4_1:+25856436 None:intergenic
GAGATTTAGGCAGAGGATCA+TGG 0.499731 4_1:+25856359 None:intergenic
TACCTACCCGCATTAGCTGC+TGG 0.504471 4_1:+25854981 None:intergenic
ACAGCAGGACGAGAAGCAGC+TGG 0.509967 4_1:+25856263 None:intergenic
TAAGTACCATCTGGACCTGC+TGG 0.510470 4_1:+25850997 None:intergenic
GAAGTCGCTGCTATATATCT+CGG 0.516026 4_1:+25853566 None:intergenic
TTTCGTCCAGCAGCTAATGC+GGG 0.520923 4_1:-25854987 Msa0541850:intron
CTGAGTACATTGACCTCGAC+TGG 0.521211 4_1:+25852469 None:intergenic
GTCGTAGTTGATATCGGAGA+TGG 0.522188 4_1:-25855097 Msa0541850:CDS
AGGAGGATCAACAATGTTCA+AGG 0.526518 4_1:-25853120 Msa0541850:CDS
AGAGGCGTTAAACCAAAGAC+TGG 0.527817 4_1:-25854190 Msa0541850:CDS
CAATCGAGAAGTTCTTCTAA+AGG 0.532385 4_1:-25855929 Msa0541850:CDS
AAGTCGCTGCTATATATCTC+GGG 0.535811 4_1:+25853567 None:intergenic
TTACCCGATTAAGCATGGTC+AGG 0.538788 4_1:-25855801 Msa0541850:CDS
AGTGTATATTCAATTATTTG+CGG 0.546766 4_1:-25855742 Msa0541850:CDS
GGATTGCTCAGCATAATGCT+GGG 0.548668 4_1:-25855901 Msa0541850:CDS
CCTGCTGTTGTCATCGACAA+TGG 0.550059 4_1:-25856248 Msa0541850:CDS
CAAACTGCAAATCTTTGGAT+AGG 0.553466 4_1:+25852442 None:intergenic
TGGTTAATATGGTTGCCAGC+AGG 0.554493 4_1:-25851012 Msa0541850:three_prime_UTR
TTCACGGCAATGTAAAGTCC+AGG 0.555616 4_1:+25855617 None:intergenic
AGCGAGTTAACGTAAGATAG+TGG 0.556343 4_1:+25856429 None:intergenic
TCGTAGTTGATATCGGAGAT+GGG 0.559617 4_1:-25855096 Msa0541850:CDS
AGACTTTGATCGAAAGTGAA+AGG 0.560966 4_1:+25856406 None:intergenic
GGTTGAGAATTGGGATGCCA+TGG 0.561166 4_1:-25855780 Msa0541850:CDS
AAGAGAAGAGACTGCATCCA+TGG 0.563656 4_1:+25851211 None:intergenic
CGACTCTCAGGCGCTGTCAA+CGG 0.571890 4_1:+25855680 None:intergenic
AACCTTAACTATGTCAGAGC+AGG 0.574256 4_1:+25854496 None:intergenic
GAAAGAAAGATCCATTGAGA+AGG 0.576256 4_1:-25856583 Msa0541850:five_prime_UTR
GCCAATTTCAAGTCATCATG+TGG 0.582876 4_1:-25851032 Msa0541850:three_prime_UTR
TTGTCATCGACAATGGCTCC+GGG 0.583211 4_1:-25856241 Msa0541850:intron
CTGCTGCCAAAATCGCTCCA+TGG 0.585282 4_1:+25855763 None:intergenic
GTCTCTCTTCCAATCTTCCA+GGG 0.587966 4_1:-25851133 Msa0541850:three_prime_UTR
TTATTTGCGGTGTGATCCTG+AGG 0.590272 4_1:-25855729 Msa0541850:CDS
CCATTGTCGATGACAACAGC+AGG 0.592798 4_1:+25856248 None:intergenic
CATCAAATCAGTTCCTATTG+CGG 0.593258 4_1:-25855026 Msa0541850:CDS
GAGGCGTTAAACCAAAGACT+GGG 0.595159 4_1:-25854189 Msa0541850:CDS
TACACATGTTGTACCAGTTG+CGG 0.599702 4_1:-25855071 Msa0541850:CDS
TAAGGCGCGCTTCAGCTGCA+AGG 0.600648 4_1:+25853045 None:intergenic
CTCACTTACCCGATTAAGCA+TGG 0.602719 4_1:-25855806 Msa0541850:CDS
AAGACTCGTTCGAAGTGGCT+CGG 0.603015 4_1:-25854544 Msa0541850:CDS
TTTGAGATAGAGAAATGCTA+TGG 0.603557 4_1:-25850708 Msa0541850:three_prime_UTR
AAAGATGAATTAGCTGACCA+TGG 0.606344 4_1:-25851228 Msa0541850:three_prime_UTR
TTGTCTATTACAACAGGCAA+AGG 0.608553 4_1:+25853537 None:intergenic
TGGTTGCCAGCAGGTCCAGA+TGG 0.609507 4_1:-25851003 Msa0541850:three_prime_UTR
CAGCAGGACGAGAAGCAGCT+GGG 0.616158 4_1:+25856264 None:intergenic
CAGCCAAGTATATCAAGCAA+TGG 0.617742 4_1:-25854213 Msa0541850:CDS
TGAACGCTTTCTTGGCCCTG+AGG 0.617976 4_1:-25854140 Msa0541850:intron
ACCAGAAGACTCGTTCGAAG+TGG 0.622925 4_1:-25854549 Msa0541850:CDS
CGAAGTGGCTCGGAAAGTGA+AGG 0.622978 4_1:-25854534 Msa0541850:CDS
CCTTGAAAACAGGATTTGTG+CGG 0.635643 4_1:+25851266 None:intergenic
CATGTTGTACCAGTTGCGGA+TGG 0.639900 4_1:-25855067 Msa0541850:CDS
AAAATGTTGGCTGAGCTGAA+TGG 0.641859 4_1:-25850948 Msa0541850:three_prime_UTR
TCCACAGTCACATCCAGTCG+AGG 0.643643 4_1:-25852482 Msa0541850:intron
CGTAGTTGATATCGGAGATG+GGG 0.648015 4_1:-25855095 Msa0541850:CDS
CAGAATATAGTGTTGTCAGG+AGG 0.650438 4_1:-25853137 Msa0541850:CDS
AAGTATATCAAGCAATGGAG+AGG 0.653283 4_1:-25854208 Msa0541850:CDS
TGTGCAGGCTTGTCATACAA+AGG 0.662053 4_1:-25851320 Msa0541850:intron
GATTGCTCAGCATAATGCTG+GGG 0.663436 4_1:-25855900 Msa0541850:CDS
TATTACAACAGGCAAAGGAG+TGG 0.671222 4_1:+25853542 None:intergenic
ACTTCGAACGAGTCTTCTGG+TGG 0.687169 4_1:+25854551 None:intergenic
AGTCTGCGCCAATTGACACA+AGG 0.690930 4_1:-25853506 Msa0541850:CDS
ACACTAGGAACAATAAAACA+AGG 0.696455 4_1:+25855980 None:intergenic
AGAGACTGTGAGATGAAACG+AGG 0.732235 4_1:+25851150 None:intergenic
AGGCGTTAAACCAAAGACTG+GGG 0.735801 4_1:-25854188 Msa0541850:CDS
TGAGAGTCGTGAGTATACTG+GGG 0.741187 4_1:-25855666 Msa0541850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAACAATATTAAAATA+TGG + chr4_1:25855492-25855511 None:intergenic 10.0%
!! AAGAAAAAAAAGAAAAAAAA+AGG + chr4_1:25855694-25855713 None:intergenic 10.0%
!! CATTAGAAATATCAAAAAAA+TGG + chr4_1:25850984-25851003 None:intergenic 15.0%
!!! CATTTTTTTGATATTTCTAA+TGG - chr4_1:25850982-25851001 Msa0541850:three_prime_UTR 15.0%
!!! AGATTTTGTATTATTATGAT+AGG - chr4_1:25851740-25851759 Msa0541850:intron 15.0%
!!! TATTGTTTTTTGAAGTTTTT+AGG - chr4_1:25852114-25852133 Msa0541850:intron 15.0%
!!! TAACATTCTAATTTTATACA+AGG + chr4_1:25852317-25852336 None:intergenic 15.0%
!!! ATTTCTTTTTTAGTGAATTA+AGG - chr4_1:25852942-25852961 Msa0541850:intron 15.0%
!!! TTTCTTTTTTAGTGAATTAA+GGG - chr4_1:25852943-25852962 Msa0541850:intron 15.0%
!! TTGAAATATTGAAATAAAGT+TGG + chr4_1:25853865-25853884 None:intergenic 15.0%
!!! ATTATTTTGATTTTTAGACA+TGG + chr4_1:25854943-25854962 None:intergenic 15.0%
!! AAAAAAAGAAAAAAAAAGGA+TGG + chr4_1:25855690-25855709 None:intergenic 15.0%
!! GATATAAAAAAAGGAAATTA+TGG - chr4_1:25856082-25856101 Msa0541850:intron 15.0%
!! ATAGTTGAAAACAAAAACTA+TGG - chr4_1:25850787-25850806 Msa0541850:three_prime_UTR 20.0%
!! TAGTTGAAAACAAAAACTAT+GGG - chr4_1:25850788-25850807 Msa0541850:three_prime_UTR 20.0%
!! ATCAAAAAAATGGTGAAAAT+CGG + chr4_1:25850974-25850993 None:intergenic 20.0%
!!! AGTTTTTTTTATTGGAATTG+TGG - chr4_1:25851163-25851182 Msa0541850:three_prime_UTR 20.0%
!! AGTGTATATTCAATTATTTG+CGG - chr4_1:25851528-25851547 Msa0541850:intron 20.0%
!!! TTGTATTATGTTGATAGAAT+TGG - chr4_1:25851820-25851839 Msa0541850:intron 20.0%
!! TTGAATATAGAATGTTATGT+TGG - chr4_1:25852060-25852079 Msa0541850:intron 20.0%
!!! AGATTTTAAAATTAAGGAAC+AGG + chr4_1:25852354-25852373 None:intergenic 20.0%
!!! AGTCACAGATTTTAAAATTA+AGG + chr4_1:25852360-25852379 None:intergenic 20.0%
!!! ATGAATAAGATCTAAAATCA+TGG + chr4_1:25852567-25852586 None:intergenic 20.0%
!! ATAAAATAACAATGTGTCAA+TGG + chr4_1:25854368-25854387 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr4_1:25854601-25854620 None:intergenic 20.0%
!!! TTTTTTCTTTTACCTTTTTC+TGG - chr4_1:25854900-25854919 Msa0541850:intron 20.0%
!!! TTTTTCTTTTACCTTTTTCT+GGG - chr4_1:25854901-25854920 Msa0541850:intron 20.0%
!! AATCGTAAATTCATTTAATG+TGG + chr4_1:25855187-25855206 None:intergenic 20.0%
!!! ATTAACTCCTTAATTTTACA+CGG + chr4_1:25855283-25855302 None:intergenic 20.0%
!!! TGACAATTTAATCTCTAAAA+AGG - chr4_1:25855333-25855352 Msa0541850:intron 20.0%
!!! AATTTAGTCTTTCAAATTGT+AGG + chr4_1:25855535-25855554 None:intergenic 20.0%
!! TAATGTGTGTTTATAATTTC+TGG - chr4_1:25855920-25855939 Msa0541850:CDS 20.0%
!! TCTTCTCTTGATATAAAAAA+AGG - chr4_1:25856073-25856092 Msa0541850:intron 20.0%
!!! TTTGATTTTTGACAAAATGT+TGG - chr4_1:25856309-25856328 Msa0541850:five_prime_UTR 20.0%
!!! ATAACATTAAGTACTTTTCT+AGG - chr4_1:25856412-25856431 Msa0541850:five_prime_UTR 20.0%
!!! CACATAATTTTTGCATTTTT+AGG - chr4_1:25856508-25856527 Msa0541850:five_prime_UTR 20.0%
! AAATATACTTTCCTTCTCAA+TGG + chr4_1:25850701-25850720 None:intergenic 25.0%
!! TTGAGAAGGAAAGTATATTT+AGG - chr4_1:25850701-25850720 Msa0541850:three_prime_UTR 25.0%
! AAAAGAAAGTAAACCCAATT+GGG + chr4_1:25851082-25851101 None:intergenic 25.0%
! AAAAAGAAAGTAAACCCAAT+TGG + chr4_1:25851083-25851102 None:intergenic 25.0%
! AACTAAAAAATATCCCATTC+AGG + chr4_1:25851147-25851166 None:intergenic 25.0%
!!! TAAAAATGTGTTTTTGTTGC+AGG - chr4_1:25851234-25851253 Msa0541850:three_prime_UTR 25.0%
! AAAAGAAAATAATGATCCTC+AGG + chr4_1:25851560-25851579 None:intergenic 25.0%
!! TGTTGATAGAATTGGAATAA+TGG - chr4_1:25851828-25851847 Msa0541850:intron 25.0%
!! ATAGAATTGGAATAATGGAA+TGG - chr4_1:25851833-25851852 Msa0541850:intron 25.0%
!!! GTTTTATTTATTCAAACCTG+TGG - chr4_1:25851880-25851899 Msa0541850:intron 25.0%
! ATTCTAAACACAAAATGCTT+TGG - chr4_1:25851939-25851958 Msa0541850:intron 25.0%
!! TGTATGCTTGTTAACATTAA+AGG - chr4_1:25852379-25852398 Msa0541850:intron 25.0%
! AGAATTGAATATTACAACCT+TGG + chr4_1:25852620-25852639 None:intergenic 25.0%
! TTCTTTGGCATAATCATTTA+AGG - chr4_1:25852819-25852838 Msa0541850:intron 25.0%
! ATAATCATTTAAGGAGTTTG+TGG - chr4_1:25852828-25852847 Msa0541850:intron 25.0%
! GACATTGAACAAAAAATGTT+CGG + chr4_1:25852897-25852916 None:intergenic 25.0%
! GTTTATTCATGACAGAAAAT+GGG + chr4_1:25853280-25853299 None:intergenic 25.0%
! TGTTTATTCATGACAGAAAA+TGG + chr4_1:25853281-25853300 None:intergenic 25.0%
! CTTAAAACCAGAAGATATAA+GGG + chr4_1:25853357-25853376 None:intergenic 25.0%
!!! ATTTTGTTGCTTTTCCTTTT+TGG - chr4_1:25853383-25853402 Msa0541850:intron 25.0%
!!! TTTTGTTGCTTTTCCTTTTT+GGG - chr4_1:25853384-25853403 Msa0541850:intron 25.0%
! ATGATTTCTTTAGTAGATGA+AGG + chr4_1:25853575-25853594 None:intergenic 25.0%
!!! ATTTTGGTCATTGAATCAAT+AGG - chr4_1:25853621-25853640 Msa0541850:intron 25.0%
! AACTTGTAAATCTCAATCTT+TGG - chr4_1:25853957-25853976 Msa0541850:intron 25.0%
! AGATCATAAATCAAAGATCT+GGG + chr4_1:25854034-25854053 None:intergenic 25.0%
! AAGATCATAAATCAAAGATC+TGG + chr4_1:25854035-25854054 None:intergenic 25.0%
! ATCATTAAGAACATGTAAAG+TGG + chr4_1:25854074-25854093 None:intergenic 25.0%
! TGAAATGAAAAGGACAAAAT+GGG + chr4_1:25854115-25854134 None:intergenic 25.0%
!!! CACTATATTCTGAAATGAAA+AGG + chr4_1:25854125-25854144 None:intergenic 25.0%
!! CCTCATTATTTAAAATCATG+TGG + chr4_1:25854417-25854436 None:intergenic 25.0%
!! CCACATGATTTTAAATAATG+AGG - chr4_1:25854414-25854433 Msa0541850:intron 25.0%
!!! AATAATGAGGTGTTAGTTTT+TGG - chr4_1:25854427-25854446 Msa0541850:intron 25.0%
!!! ATATGTTTATTGGTTTGATC+TGG - chr4_1:25854732-25854751 Msa0541850:intron 25.0%
!!! CTTTTTTTCTTTTCACTTCT+TGG - chr4_1:25854763-25854782 Msa0541850:intron 25.0%
!!! ATCAACACCTGAATTTTTTA+CGG - chr4_1:25854872-25854891 Msa0541850:intron 25.0%
!! AATAATAATCTCTTTTGACC+TGG - chr4_1:25854957-25854976 Msa0541850:intron 25.0%
! ACTTATGATGTTGGATAAAA+CGG - chr4_1:25854996-25855015 Msa0541850:CDS 25.0%
! AAGTAAAAAAACTACATCCA+GGG + chr4_1:25855119-25855138 None:intergenic 25.0%
! AAAGTAAAAAAACTACATCC+AGG + chr4_1:25855120-25855139 None:intergenic 25.0%
! TTTGCTTATCATTTGTGATT+TGG - chr4_1:25855142-25855161 Msa0541850:intron 25.0%
! TTGCTTATCATTTGTGATTT+GGG - chr4_1:25855143-25855162 Msa0541850:intron 25.0%
! ATGCATGTTAACAAACTAAA+TGG - chr4_1:25855209-25855228 Msa0541850:intron 25.0%
!! AATATCATGTTTTCAAACCA+AGG + chr4_1:25855256-25855275 None:intergenic 25.0%
!! TTGGTTTGAAAACATGATAT+TGG - chr4_1:25855255-25855274 Msa0541850:intron 25.0%
! TATAATCCTTCAAATTGTCT+TGG + chr4_1:25855419-25855438 None:intergenic 25.0%
!! GATTGATGATTTGAATTTCT+TGG - chr4_1:25855465-25855484 Msa0541850:intron 25.0%
! CACTCAAAATTTAGATAACT+AGG - chr4_1:25855562-25855581 Msa0541850:intron 25.0%
! TTTAGACATCTTAATCTACA+AGG + chr4_1:25855605-25855624 None:intergenic 25.0%
! TTAAGAACAGTAAGAAACTA+TGG + chr4_1:25855656-25855675 None:intergenic 25.0%
! AAAAAAAGGAAATTATGGTC+TGG - chr4_1:25856087-25856106 Msa0541850:intron 25.0%
!!! TGCATTTTTTCATTTGTTGT+TGG - chr4_1:25856382-25856401 Msa0541850:five_prime_UTR 25.0%
!!! GCATTTTTTCATTTGTTGTT+GGG - chr4_1:25856383-25856402 Msa0541850:five_prime_UTR 25.0%
AAAATGGTGAAAATCGGAAA+TGG + chr4_1:25850968-25850987 None:intergenic 30.0%
AATAGAAATGGAGTGAGAAA+AGG + chr4_1:25851057-25851076 None:intergenic 30.0%
TCCATTTCTATTTACCCAAT+TGG - chr4_1:25851065-25851084 Msa0541850:three_prime_UTR 30.0%
CCATTTCTATTTACCCAATT+GGG - chr4_1:25851066-25851085 Msa0541850:three_prime_UTR 30.0%
TGATATTGAGATATCCGAAT+TGG - chr4_1:25851195-25851214 Msa0541850:three_prime_UTR 30.0%
GATATTGAGATATCCGAATT+GGG - chr4_1:25851196-25851215 Msa0541850:three_prime_UTR 30.0%
AATTCAACACAAACCCAATT+CGG + chr4_1:25851212-25851231 None:intergenic 30.0%
ACACTAGGAACAATAAAACA+AGG + chr4_1:25851293-25851312 None:intergenic 30.0%
!! TTGTTTTATTGTTCCTAGTG+TGG - chr4_1:25851292-25851311 Msa0541850:CDS 30.0%
! GAAGTTCTTCTAAAGGAAAT+TGG - chr4_1:25851348-25851367 Msa0541850:intron 30.0%
GCTGATCTTGATTTCTTTAT+TGG - chr4_1:25851398-25851417 Msa0541850:intron 30.0%
TATCAACATAATACAACAGC+CGG + chr4_1:25851816-25851835 None:intergenic 30.0%
! TTGGAATAATGGAATGGAAT+TGG - chr4_1:25851839-25851858 Msa0541850:intron 30.0%
! AATAATGGAATGGAATTGGA+TGG - chr4_1:25851843-25851862 Msa0541850:intron 30.0%
!!! AATTGGATGGTTAGTTTTGA+AGG - chr4_1:25851856-25851875 Msa0541850:intron 30.0%
!!! ATTGGATGGTTAGTTTTGAA+GGG - chr4_1:25851857-25851876 Msa0541850:intron 30.0%
TTGTACAAAAGATTTACCAC+AGG + chr4_1:25851899-25851918 None:intergenic 30.0%
TTTGTAATATTACAAGCGCA+TGG - chr4_1:25852021-25852040 Msa0541850:intron 30.0%
TTGTAATATTACAAGCGCAT+GGG - chr4_1:25852022-25852041 Msa0541850:intron 30.0%
TAATGCTAATCATGGATGAA+TGG - chr4_1:25852463-25852482 Msa0541850:CDS 30.0%
AATGCTAATCATGGATGAAT+GGG - chr4_1:25852464-25852483 Msa0541850:CDS 30.0%
! CGTTTTGCCATATTAAGTTT+TGG - chr4_1:25852588-25852607 Msa0541850:intron 30.0%
GTCAGTACCAAAACTTAATA+TGG + chr4_1:25852598-25852617 None:intergenic 30.0%
!! ATGTTTACATTGATTTGTGC+AGG - chr4_1:25852679-25852698 Msa0541850:intron 30.0%
GTTCACTGCTTATATTTCTT+TGG - chr4_1:25852804-25852823 Msa0541850:intron 30.0%
AAGCAAAGAAACAAAGCTAT+TGG + chr4_1:25852864-25852883 None:intergenic 30.0%
ATAATTGCTCAATTTCTCTC+AGG - chr4_1:25853010-25853029 Msa0541850:intron 30.0%
TAGCCAATATCACAAGAATA+TGG + chr4_1:25853110-25853129 None:intergenic 30.0%
! GATGATAGAGAAAGTATAAC+GGG + chr4_1:25853168-25853187 None:intergenic 30.0%
! GGATGATAGAGAAAGTATAA+CGG + chr4_1:25853169-25853188 None:intergenic 30.0%
TGAATAAACACCTTTCTTAG+TGG - chr4_1:25853291-25853310 Msa0541850:intron 30.0%
GAATAAACACCTTTCTTAGT+GGG - chr4_1:25853292-25853311 Msa0541850:intron 30.0%
AATAAACACCTTTCTTAGTG+GGG - chr4_1:25853293-25853312 Msa0541850:intron 30.0%
CCTTAAAACCAGAAGATATA+AGG + chr4_1:25853358-25853377 None:intergenic 30.0%
!!! CCTTATATCTTCTGGTTTTA+AGG - chr4_1:25853355-25853374 Msa0541850:intron 30.0%
!! AAATCGTTGATAACCCAAAA+AGG + chr4_1:25853400-25853419 None:intergenic 30.0%
AACGATTTCTAAATCCTGAT+AGG - chr4_1:25853412-25853431 Msa0541850:intron 30.0%
ACGATTTCTAAATCCTGATA+GGG - chr4_1:25853413-25853432 Msa0541850:intron 30.0%
ACAGAGATCAATAGCTAATT+GGG + chr4_1:25853536-25853555 None:intergenic 30.0%
TACAGAGATCAATAGCTAAT+TGG + chr4_1:25853537-25853556 None:intergenic 30.0%
!! CATTCCTTGGTGTAATATTT+TGG - chr4_1:25853605-25853624 Msa0541850:intron 30.0%
ATGACCAAAATATTACACCA+AGG + chr4_1:25853612-25853631 None:intergenic 30.0%
GAAAACCTGCAAAAGTAATA+GGG + chr4_1:25853677-25853696 None:intergenic 30.0%
AGAAAACCTGCAAAAGTAAT+AGG + chr4_1:25853678-25853697 None:intergenic 30.0%
CACAAGGAGATCATTATATA+AGG - chr4_1:25853780-25853799 Msa0541850:intron 30.0%
TCACCAATTAAATTGAGATG+AGG + chr4_1:25853813-25853832 None:intergenic 30.0%
TTACAAGTTCTCGAACATTA+AGG + chr4_1:25853946-25853965 None:intergenic 30.0%
GATCATAAATCAAAGATCTG+GGG + chr4_1:25854033-25854052 None:intergenic 30.0%
TTAAGAACATGTAAAGTGGA+GGG + chr4_1:25854070-25854089 None:intergenic 30.0%
ATTAAGAACATGTAAAGTGG+AGG + chr4_1:25854071-25854090 None:intergenic 30.0%
CTGAAATGAAAAGGACAAAA+TGG + chr4_1:25854116-25854135 None:intergenic 30.0%
TTTCAGAATATAGTGTTGTC+AGG - chr4_1:25854130-25854149 Msa0541850:intron 30.0%
!! TCACTTTTATCTCTCCATTA+AGG + chr4_1:25854246-25854265 None:intergenic 30.0%
GTGATCATCAGTTTAAGTAA+AGG + chr4_1:25854282-25854301 None:intergenic 30.0%
TTTGCAATAGCTAAGCTATA+TGG - chr4_1:25854327-25854346 Msa0541850:intron 30.0%
!!! GTGTTAGTTTTTGGTTGATT+CGG - chr4_1:25854436-25854455 Msa0541850:intron 30.0%
TATAATTGTATGTGTCGTGT+CGG - chr4_1:25854631-25854650 Msa0541850:intron 30.0%
TTTCATAAACTATGAAGCAC+TGG + chr4_1:25854700-25854719 None:intergenic 30.0%
AAGCATACCGTAAAAAATTC+AGG + chr4_1:25854882-25854901 None:intergenic 30.0%
!! TATTCTGAGACTTATGATGT+TGG - chr4_1:25854987-25855006 Msa0541850:intron 30.0%
! TAAAACGGTTCTTTAGGTTT+AGG - chr4_1:25855011-25855030 Msa0541850:CDS 30.0%
AACTAAATGGTTACGACTTA+TGG - chr4_1:25855222-25855241 Msa0541850:intron 30.0%
ATTGGATCCGTGTAAAATTA+AGG - chr4_1:25855273-25855292 Msa0541850:intron 30.0%
CACAAATTTAGTCTCTGTAA+TGG - chr4_1:25855303-25855322 Msa0541850:intron 30.0%
AATTTAGTCTCTGTAATGGT+AGG - chr4_1:25855307-25855326 Msa0541850:intron 30.0%
ATTTAGTCTCTGTAATGGTA+GGG - chr4_1:25855308-25855327 Msa0541850:intron 30.0%
! ATTGACTCAAAAGACTAGTT+TGG - chr4_1:25855438-25855457 Msa0541850:intron 30.0%
CTAAAAAAAAACTTTCTCCC+AGG - chr4_1:25855620-25855639 Msa0541850:CDS 30.0%
AGAACTGCAAGAATTAAAAC+TGG + chr4_1:25856209-25856228 None:intergenic 30.0%
AAGTCATCATGTGGTTAATA+TGG - chr4_1:25856247-25856266 Msa0541850:CDS 30.0%
! TTTGAGATAGAGAAATGCTA+TGG - chr4_1:25856562-25856581 Msa0541850:five_prime_UTR 30.0%
GAAAGAAAGATCCATTGAGA+AGG - chr4_1:25850687-25850706 Msa0541850:three_prime_UTR 35.0%
! TAACGTAAGATAGTGGTTGT+TGG + chr4_1:25850837-25850856 None:intergenic 35.0%
AGACTTTGATCGAAAGTGAA+AGG + chr4_1:25850867-25850886 None:intergenic 35.0%
CCCAATTGGGTAAATAGAAA+TGG + chr4_1:25851069-25851088 None:intergenic 35.0%
! TGTTTGTTGAAATGCCTGAA+TGG - chr4_1:25851130-25851149 Msa0541850:three_prime_UTR 35.0%
! GTTTGTTGAAATGCCTGAAT+GGG - chr4_1:25851131-25851150 Msa0541850:three_prime_UTR 35.0%
TTGTTGCAGGTATACGAAAA+TGG - chr4_1:25851247-25851266 Msa0541850:exon 35.0%
TGTTGCAGGTATACGAAAAT+GGG - chr4_1:25851248-25851267 Msa0541850:exon 35.0%
CAATCGAGAAGTTCTTCTAA+AGG - chr4_1:25851341-25851360 Msa0541850:intron 35.0%
!! TTTGAGACTTTTAATGTGCC+TGG - chr4_1:25851635-25851654 Msa0541850:intron 35.0%
GATTTATGAAACTTGCCTAG+CGG - chr4_1:25851780-25851799 Msa0541850:intron 35.0%
!!! TTGGATGGTTAGTTTTGAAG+GGG - chr4_1:25851858-25851877 Msa0541850:intron 35.0%
TCAACAGAGTGATTCACTTT+CGG + chr4_1:25851980-25851999 None:intergenic 35.0%
!! GTTATGTTGGCTTAGCATAT+TGG - chr4_1:25852073-25852092 Msa0541850:intron 35.0%
!! TCTTTTTAGTGTGAGATGAC+AGG - chr4_1:25852149-25852168 Msa0541850:intron 35.0%
CATCAAATCAGTTCCTATTG+CGG - chr4_1:25852244-25852263 Msa0541850:intron 35.0%
ATCAAATCAGTTCCTATTGC+GGG - chr4_1:25852245-25852264 Msa0541850:intron 35.0%
AATTAAGGAACAGGTAGTAG+TGG + chr4_1:25852345-25852364 None:intergenic 35.0%
GATTAGCATTAACCAATGCA+TGG + chr4_1:25852454-25852473 None:intergenic 35.0%
!! GCATTGGTTAATGCTAATCA+TGG - chr4_1:25852455-25852474 Msa0541850:CDS 35.0%
ATGCTAATCATGGATGAATG+GGG - chr4_1:25852465-25852484 Msa0541850:CDS 35.0%
!!! TTAAGTTTTGGTACTGACCA+AGG - chr4_1:25852600-25852619 Msa0541850:intron 35.0%
AGGGACGTAAAGTTATCTAT+TGG - chr4_1:25852962-25852981 Msa0541850:intron 35.0%
TCTCCATTGCTTGATATACT+TGG + chr4_1:25853063-25853082 None:intergenic 35.0%
AAGTATATCAAGCAATGGAG+AGG - chr4_1:25853062-25853081 Msa0541850:CDS 35.0%
GCTCCATATTCTTGTGATAT+TGG - chr4_1:25853104-25853123 Msa0541850:CDS 35.0%
TATTCATGACAGAAAATGGG+AGG + chr4_1:25853277-25853296 None:intergenic 35.0%
GGGGATTATCTGTGAAAAAA+TGG - chr4_1:25853312-25853331 Msa0541850:intron 35.0%
CGATTTCTAAATCCTGATAG+GGG - chr4_1:25853414-25853433 Msa0541850:intron 35.0%
TATTGATCTCTGTACTCCTT+AGG - chr4_1:25853543-25853562 Msa0541850:CDS 35.0%
TAGATGAAGGAACAAACCTA+AGG + chr4_1:25853562-25853581 None:intergenic 35.0%
CATGAAAATGTAGCATTCCT+TGG - chr4_1:25853592-25853611 Msa0541850:intron 35.0%
GGTCATTGAATCAATAGGAT+TGG - chr4_1:25853626-25853645 Msa0541850:intron 35.0%
AAAGTAATAGGGTAAACCCA+CGG + chr4_1:25853666-25853685 None:intergenic 35.0%
!! GTTTACCCTATTACTTTTGC+AGG - chr4_1:25853669-25853688 Msa0541850:intron 35.0%
TTGTCTATTACAACAGGCAA+AGG + chr4_1:25853736-25853755 None:intergenic 35.0%
ATGCACTTGTCTATTACAAC+AGG + chr4_1:25853742-25853761 None:intergenic 35.0%
AATGATCTCCTTGTGTCAAT+TGG + chr4_1:25853775-25853794 None:intergenic 35.0%
GCACCTCATCTCAATTTAAT+TGG - chr4_1:25853807-25853826 Msa0541850:intron 35.0%
! CAATGTTCAAGGATTTTCAC+AGG - chr4_1:25854161-25854180 Msa0541850:CDS 35.0%
TAGCTTAGCTATTGCAAACA+AGG + chr4_1:25854325-25854344 None:intergenic 35.0%
TTTGGAAGAAGTTCTCACAT+TGG - chr4_1:25854520-25854539 Msa0541850:CDS 35.0%
TGTTTGTGAACTATGAAGCA+CGG - chr4_1:25854546-25854565 Msa0541850:CDS 35.0%
TCTCAAATTATTAGCGGTGT+CGG + chr4_1:25854595-25854614 None:intergenic 35.0%
CAAACTGCAAATCTTTGGAT+AGG + chr4_1:25854831-25854850 None:intergenic 35.0%
CTATCCAAAGATTTGCAGTT+TGG - chr4_1:25854829-25854848 Msa0541850:intron 35.0%
CAAACCAAACTGCAAATCTT+TGG + chr4_1:25854836-25854855 None:intergenic 35.0%
CAAAGATTTGCAGTTTGGTT+TGG - chr4_1:25854834-25854853 Msa0541850:intron 35.0%
ACAAGTCATAACCCAGAAAA+AGG + chr4_1:25854915-25854934 None:intergenic 35.0%
GTTGGATAAAACGGTTCTTT+AGG - chr4_1:25855005-25855024 Msa0541850:CDS 35.0%
GACTTATGGTATTGTTTCCT+TGG - chr4_1:25855236-25855255 Msa0541850:intron 35.0%
! TTTTCTCTGTGTTAACTCTC+TGG - chr4_1:25855714-25855733 Msa0541850:CDS 35.0%
! TGTTAACTCTCTGGTTCATA+GGG - chr4_1:25855723-25855742 Msa0541850:CDS 35.0%
AAGGCAGAATACGAAGAATA+TGG - chr4_1:25855969-25855988 Msa0541850:CDS 35.0%
TAATACATCCCCTTGAAAAC+AGG + chr4_1:25856017-25856036 None:intergenic 35.0%
AAAGATGAATTAGCTGACCA+TGG - chr4_1:25856042-25856061 Msa0541850:intron 35.0%
TAATTCTTGCAGTTCTTCCT+AGG - chr4_1:25856213-25856232 Msa0541850:intron 35.0%
ACCACATGATGACTTGAAAT+TGG + chr4_1:25856242-25856261 None:intergenic 35.0%
ATCTACCAATAAGTACCATC+TGG + chr4_1:25856285-25856304 None:intergenic 35.0%
TTAGTGTTCAGCTTAGAGTT+TGG - chr4_1:25856351-25856370 Msa0541850:five_prime_UTR 35.0%
! CATTAAGTACTTTTCTAGGC+AGG - chr4_1:25856416-25856435 Msa0541850:five_prime_UTR 35.0%
AGCGAGTTAACGTAAGATAG+TGG + chr4_1:25850844-25850863 None:intergenic 40.0%
CAGATCCAGTAGAGAGATTT+AGG + chr4_1:25850927-25850946 None:intergenic 40.0%
CAGGCATTTCAACAAACACA+TGG + chr4_1:25851128-25851147 None:intergenic 40.0%
! TATACGAAAATGGGCTTTGC+TGG - chr4_1:25851257-25851276 Msa0541850:CDS 40.0%
TCAACCTGACCATGCTTAAT+CGG + chr4_1:25851476-25851495 None:intergenic 40.0%
TCACTCTGTTGAGTAAGAAC+TGG - chr4_1:25851988-25852007 Msa0541850:intron 40.0%
TGTTGAGTAAGAACTGGTTG+CGG - chr4_1:25851994-25852013 Msa0541850:intron 40.0%
! ACAGGAGTCGTAGTTGATAT+CGG - chr4_1:25852167-25852186 Msa0541850:intron 40.0%
! TCGTAGTTGATATCGGAGAT+GGG - chr4_1:25852174-25852193 Msa0541850:intron 40.0%
TACACATGTTGTACCAGTTG+CGG - chr4_1:25852199-25852218 Msa0541850:intron 40.0%
ATAACATAACCATCCGCAAC+TGG + chr4_1:25852215-25852234 None:intergenic 40.0%
GTTGCGGATGGTTATGTTAT+TGG - chr4_1:25852215-25852234 Msa0541850:intron 40.0%
! GAAAGTGTGAAACCATGCAT+TGG - chr4_1:25852439-25852458 Msa0541850:CDS 40.0%
CATGAGACAGTTCATGAATC+TGG + chr4_1:25852662-25852681 None:intergenic 40.0%
!! CATTGATTTGTGCAGGAAAG+AGG - chr4_1:25852686-25852705 Msa0541850:intron 40.0%
AACCTTAACTATGTCAGAGC+AGG + chr4_1:25852777-25852796 None:intergenic 40.0%
CATTGCTTGATATACTTGGC+TGG + chr4_1:25853059-25853078 None:intergenic 40.0%
CAGCCAAGTATATCAAGCAA+TGG - chr4_1:25853057-25853076 Msa0541850:CDS 40.0%
ATTGGCTATGAACGCTTTCT+TGG - chr4_1:25853122-25853141 Msa0541850:CDS 40.0%
! ACTTTCTGAGAGATGTGCTA+TGG + chr4_1:25853190-25853209 None:intergenic 40.0%
CACATCTCTCAGAAAGTTCT+GGG - chr4_1:25853193-25853212 Msa0541850:intron 40.0%
ACAGAAAATGGGAGGTAATC+AGG + chr4_1:25853269-25853288 None:intergenic 40.0%
CAGATAATCCCCACTAAGAA+AGG + chr4_1:25853304-25853323 None:intergenic 40.0%
AACCAGAAGATATAAGGGCA+AGG + chr4_1:25853352-25853371 None:intergenic 40.0%
TTCTAAATCCTGATAGGGGA+TGG - chr4_1:25853418-25853437 Msa0541850:intron 40.0%
TCTAAATCCTGATAGGGGAT+GGG - chr4_1:25853419-25853438 Msa0541850:intron 40.0%
ACTACTTGATCAATGATCCC+AGG + chr4_1:25853493-25853512 None:intergenic 40.0%
TTGGGATCATCAAGTCTCTT+AGG + chr4_1:25853518-25853537 None:intergenic 40.0%
TGGTGATTTAAAGATTCCCG+TGG - chr4_1:25853646-25853665 Msa0541850:intron 40.0%
GGTGATTTAAAGATTCCCGT+GGG - chr4_1:25853647-25853666 Msa0541850:intron 40.0%
AAGTAATAGGGTAAACCCAC+GGG + chr4_1:25853665-25853684 None:intergenic 40.0%
AAGTCGCTGCTATATATCTC+GGG + chr4_1:25853706-25853725 None:intergenic 40.0%
GAAGTCGCTGCTATATATCT+CGG + chr4_1:25853707-25853726 None:intergenic 40.0%
TATTACAACAGGCAAAGGAG+TGG + chr4_1:25853731-25853750 None:intergenic 40.0%
CATAAATCAAAGATCTGGGG+TGG + chr4_1:25854030-25854049 None:intergenic 40.0%
AAAATGGGCAAGTCGTAAAG+AGG + chr4_1:25854100-25854119 None:intergenic 40.0%
CAGAATATAGTGTTGTCAGG+AGG - chr4_1:25854133-25854152 Msa0541850:intron 40.0%
AGGAGGATCAACAATGTTCA+AGG - chr4_1:25854150-25854169 Msa0541850:CDS 40.0%
ACAATGTGTCAATGGTTGAC+TGG + chr4_1:25854360-25854379 None:intergenic 40.0%
CTTCCAAACATGTGTACATG+TGG + chr4_1:25854508-25854527 None:intergenic 40.0%
ATGAAGCACGGATACATACA+CGG - chr4_1:25854558-25854577 Msa0541850:CDS 40.0%
CCAATAAACATATAGCTGCG+AGG + chr4_1:25854725-25854744 None:intergenic 40.0%
CCTCGCAGCTATATGTTTAT+TGG - chr4_1:25854722-25854741 Msa0541850:intron 40.0%
CTGCAAATCTTTGGATAGGA+TGG + chr4_1:25854827-25854846 None:intergenic 40.0%
!! AGATTTGCAGTTTGGTTTGG+TGG - chr4_1:25854837-25854856 Msa0541850:intron 40.0%
GTCTCAGAATAAATGTGTCC+AGG + chr4_1:25854978-25854997 None:intergenic 40.0%
TTGTCATGCAATCCATTCAC+CGG + chr4_1:25855094-25855113 None:intergenic 40.0%
CAAATTGTCTTGGAGTTGGA+CGG + chr4_1:25855409-25855428 None:intergenic 40.0%
CCTTCAAATTGTCTTGGAGT+TGG + chr4_1:25855413-25855432 None:intergenic 40.0%
CCAACTCCAAGACAATTTGA+AGG - chr4_1:25855410-25855429 Msa0541850:intron 40.0%
! GTGTTAACTCTCTGGTTCAT+AGG - chr4_1:25855722-25855741 Msa0541850:CDS 40.0%
! GTTAACTCTCTGGTTCATAG+GGG - chr4_1:25855724-25855743 Msa0541850:CDS 40.0%
AGAACCCTAGTTCAATTCCT+GGG + chr4_1:25855815-25855834 None:intergenic 40.0%
GATGGAAACAACCAAGTGAT+GGG + chr4_1:25855883-25855902 None:intergenic 40.0%
CCTTGAAAACAGGATTTGTG+CGG + chr4_1:25856007-25856026 None:intergenic 40.0%
! CGCACAAATCCTGTTTTCAA+GGG - chr4_1:25856005-25856024 Msa0541850:CDS 40.0%
!! GCACAAATCCTGTTTTCAAG+GGG - chr4_1:25856006-25856025 Msa0541850:CDS 40.0%
! ATTTTACACTTCTGCTACCC+TGG + chr4_1:25856157-25856176 None:intergenic 40.0%
! TGACTTGAAATTGGCTTCCT+AGG + chr4_1:25856233-25856252 None:intergenic 40.0%
! GCCAATTTCAAGTCATCATG+TGG - chr4_1:25856238-25856257 Msa0541850:intron 40.0%
! AAAATGTTGGCTGAGCTGAA+TGG - chr4_1:25856322-25856341 Msa0541850:five_prime_UTR 40.0%
AGGCAGGAGATTAAATTCGT+TGG - chr4_1:25856432-25856451 Msa0541850:five_prime_UTR 40.0%
GGCAGGAGATTAAATTCGTT+GGG - chr4_1:25856433-25856452 Msa0541850:five_prime_UTR 40.0%
AGGTATGTAATGCACACTTC+AGG - chr4_1:25856528-25856547 Msa0541850:five_prime_UTR 40.0%
GAGATTTAGGCAGAGGATCA+TGG + chr4_1:25850914-25850933 None:intergenic 45.0%
CAGTAGAGAGATTTAGGCAG+AGG + chr4_1:25850921-25850940 None:intergenic 45.0%
CTCTGCCTAAATCTCTCTAC+TGG - chr4_1:25850919-25850938 Msa0541850:three_prime_UTR 45.0%
!! ATGGAGTGAGAAAAGGTACC+CGG + chr4_1:25851050-25851069 None:intergenic 45.0%
TCGTTAATCGCAACCACACT+AGG + chr4_1:25851308-25851327 None:intergenic 45.0%
TGGATTGCTCAGCATAATGC+TGG - chr4_1:25851368-25851387 Msa0541850:intron 45.0%
GGATTGCTCAGCATAATGCT+GGG - chr4_1:25851369-25851388 Msa0541850:intron 45.0%
GATTGCTCAGCATAATGCTG+GGG - chr4_1:25851370-25851389 Msa0541850:intron 45.0%
TCAGCATAATGCTGGGGTTA+TGG - chr4_1:25851376-25851395 Msa0541850:intron 45.0%
CTCACTTACCCGATTAAGCA+TGG - chr4_1:25851464-25851483 Msa0541850:intron 45.0%
TTACCCGATTAAGCATGGTC+AGG - chr4_1:25851469-25851488 Msa0541850:intron 45.0%
CAACCTGACCATGCTTAATC+GGG + chr4_1:25851475-25851494 None:intergenic 45.0%
!! AGCATGGTCAGGTTGAGAAT+TGG - chr4_1:25851480-25851499 Msa0541850:intron 45.0%
!! GCATGGTCAGGTTGAGAATT+GGG - chr4_1:25851481-25851500 Msa0541850:intron 45.0%
TTATTTGCGGTGTGATCCTG+AGG - chr4_1:25851541-25851560 Msa0541850:intron 45.0%
CTGAGAGTCGTGAGTATACT+GGG - chr4_1:25851603-25851622 Msa0541850:intron 45.0%
TGAGAGTCGTGAGTATACTG+GGG - chr4_1:25851604-25851623 Msa0541850:intron 45.0%
TTCACGGCAATGTAAAGTCC+AGG + chr4_1:25851656-25851675 None:intergenic 45.0%
GAGAGCAAGCACAGAATTCA+CGG + chr4_1:25851672-25851691 None:intergenic 45.0%
! GTCGTAGTTGATATCGGAGA+TGG - chr4_1:25852173-25852192 Msa0541850:intron 45.0%
! CGTAGTTGATATCGGAGATG+GGG - chr4_1:25852175-25852194 Msa0541850:intron 45.0%
ATCAGTTCCTATTGCGGGAA+AGG - chr4_1:25852250-25852269 Msa0541850:intron 45.0%
GTAACATCCTTTCCCGCAAT+AGG + chr4_1:25852260-25852279 None:intergenic 45.0%
! TTTTCGTCCAGCAGCTAATG+CGG - chr4_1:25852282-25852301 Msa0541850:intron 45.0%
CACCTGCTCTGACATAGTTA+AGG - chr4_1:25852772-25852791 Msa0541850:intron 45.0%
!! AGAGGCGTTAAACCAAAGAC+TGG - chr4_1:25853080-25853099 Msa0541850:CDS 45.0%
! GAGGCGTTAAACCAAAGACT+GGG - chr4_1:25853081-25853100 Msa0541850:CDS 45.0%
AGGCGTTAAACCAAAGACTG+GGG - chr4_1:25853082-25853101 Msa0541850:CDS 45.0%
GCACATCTCTCAGAAAGTTC+TGG - chr4_1:25853192-25853211 Msa0541850:intron 45.0%
TGCCTTGCCCTTATATCTTC+TGG - chr4_1:25853347-25853366 Msa0541850:intron 45.0%
! CGAAGTGCGTTTTCTGTTGT+TGG - chr4_1:25853980-25853999 Msa0541850:intron 45.0%
CCAAACATGTGTACATGTGG+AGG + chr4_1:25854505-25854524 None:intergenic 45.0%
CCTCCACATGTACACATGTT+TGG - chr4_1:25854502-25854521 Msa0541850:CDS 45.0%
TAGATTATGTCTTGCTCCCG+AGG - chr4_1:25855063-25855082 Msa0541850:CDS 45.0%
ACTATGGACTCTGTCTTCCT+GGG + chr4_1:25855640-25855659 None:intergenic 45.0%
AACTATGGACTCTGTCTTCC+TGG + chr4_1:25855641-25855660 None:intergenic 45.0%
! TCTCTGGTTCATAGGGGAAA+GGG - chr4_1:25855730-25855749 Msa0541850:CDS 45.0%
AGCCGAACTCCAGATTACTA+GGG + chr4_1:25855757-25855776 None:intergenic 45.0%
TTCCACCCAGGAATTGAACT+AGG - chr4_1:25855807-25855826 Msa0541850:CDS 45.0%
TCCACCCAGGAATTGAACTA+GGG - chr4_1:25855808-25855827 Msa0541850:CDS 45.0%
GAGAACCCTAGTTCAATTCC+TGG + chr4_1:25855816-25855835 None:intergenic 45.0%
GGTTAATGAGCTCCACCAAT+GGG + chr4_1:25855853-25855872 None:intergenic 45.0%
TGGTTAATGAGCTCCACCAA+TGG + chr4_1:25855854-25855873 None:intergenic 45.0%
GGATGGAAACAACCAAGTGA+TGG + chr4_1:25855884-25855903 None:intergenic 45.0%
! TGGTTGTTTCCATCCGTTCT+TGG - chr4_1:25855889-25855908 Msa0541850:CDS 45.0%
!! CATTAGCTCTGCACCAAGAA+CGG + chr4_1:25855905-25855924 None:intergenic 45.0%
TGTGCAGGCTTGTCATACAA+AGG - chr4_1:25855950-25855969 Msa0541850:CDS 45.0%
! CCGCACAAATCCTGTTTTCA+AGG - chr4_1:25856004-25856023 Msa0541850:CDS 45.0%
AAGAGAAGAGACTGCATCCA+TGG + chr4_1:25856062-25856081 None:intergenic 45.0%
AGAGACTGTGAGATGAAACG+AGG + chr4_1:25856123-25856142 None:intergenic 45.0%
AGTCTCTCTTCCAATCTTCC+AGG - chr4_1:25856136-25856155 Msa0541850:intron 45.0%
GTCTCTCTTCCAATCTTCCA+GGG - chr4_1:25856137-25856156 Msa0541850:intron 45.0%
TGGTTAATATGGTTGCCAGC+AGG - chr4_1:25856258-25856277 Msa0541850:CDS 45.0%
CAGGTCCAGATGGTACTTAT+TGG - chr4_1:25856277-25856296 Msa0541850:exon 45.0%
!!! TATTTTTTAGTTTTTTTTAT+TGG - chr4_1:25851155-25851174 Msa0541850:three_prime_UTR 5.0%
CCATTGTCGATGACAACAGC+AGG + chr4_1:25851025-25851044 None:intergenic 50.0%
CCTGCTGTTGTCATCGACAA+TGG - chr4_1:25851022-25851041 Msa0541850:three_prime_UTR 50.0%
GTTGTCATCGACAATGGCTC+CGG - chr4_1:25851028-25851047 Msa0541850:three_prime_UTR 50.0%
TTGTCATCGACAATGGCTCC+GGG - chr4_1:25851029-25851048 Msa0541850:three_prime_UTR 50.0%
GGTTGAGAATTGGGATGCCA+TGG - chr4_1:25851490-25851509 Msa0541850:intron 50.0%
CCAGTATACTCACGACTCTC+AGG + chr4_1:25851605-25851624 None:intergenic 50.0%
CCTGAGAGTCGTGAGTATAC+TGG - chr4_1:25851602-25851621 Msa0541850:intron 50.0%
! TGCTGGCTACACTACGTCTA+AGG - chr4_1:25851694-25851713 Msa0541850:intron 50.0%
TGAGTAAGAACTGGTTGCGG+TGG - chr4_1:25851997-25852016 Msa0541850:intron 50.0%
CATGTTGTACCAGTTGCGGA+TGG - chr4_1:25852203-25852222 Msa0541850:intron 50.0%
TTTCGTCCAGCAGCTAATGC+GGG - chr4_1:25852283-25852302 Msa0541850:intron 50.0%
ACTTCGAACGAGTCTTCTGG+TGG + chr4_1:25852722-25852741 None:intergenic 50.0%
ACCAGAAGACTCGTTCGAAG+TGG - chr4_1:25852721-25852740 Msa0541850:intron 50.0%
AAGACTCGTTCGAAGTGGCT+CGG - chr4_1:25852726-25852745 Msa0541850:intron 50.0%
GAATATGGAGCCCCAGTCTT+TGG + chr4_1:25853095-25853114 None:intergenic 50.0%
! TGGCCCTGAGGTTTGTTCTT+TGG - chr4_1:25853142-25853161 Msa0541850:intron 50.0%
GGGCCAAAGAACAAACCTCA+GGG + chr4_1:25853148-25853167 None:intergenic 50.0%
ATCCTGATAGGGGATGGGAA+AGG - chr4_1:25853424-25853443 Msa0541850:intron 50.0%
TCCTGATAGGGGATGGGAAA+GGG - chr4_1:25853425-25853444 Msa0541850:intron 50.0%
GGAAAGGGATGCTTAAGTGC+AGG - chr4_1:25853440-25853459 Msa0541850:intron 50.0%
AAGTGCAGGCAATGCACATC+CGG - chr4_1:25853454-25853473 Msa0541850:intron 50.0%
AGTCTGCGCCAATTGACACA+AGG - chr4_1:25853764-25853783 Msa0541850:intron 50.0%
! GTTTTCTGTTGTTGGCCCAG+AGG - chr4_1:25853988-25854007 Msa0541850:intron 50.0%
CTTCCGACTGATAAGCCTCT+GGG + chr4_1:25854006-25854025 None:intergenic 50.0%
TCTTCCGACTGATAAGCCTC+TGG + chr4_1:25854007-25854026 None:intergenic 50.0%
! TTGTATGTGTCGTGTCGGTG+TGG - chr4_1:25854636-25854655 Msa0541850:intron 50.0%
! TGTATGTGTCGTGTCGGTGT+GGG - chr4_1:25854637-25854656 Msa0541850:intron 50.0%
!! TATGAAGCACTGGCACTCCT+CGG + chr4_1:25854690-25854709 None:intergenic 50.0%
CTGAGTACATTGACCTCGAC+TGG + chr4_1:25854804-25854823 None:intergenic 50.0%
TGGATTGCATGACAATGCCC+TGG - chr4_1:25855099-25855118 Msa0541850:CDS 50.0%
! CTCTCTGGTTCATAGGGGAA+AGG - chr4_1:25855729-25855748 Msa0541850:CDS 50.0%
! CTCTGGTTCATAGGGGAAAG+GGG - chr4_1:25855731-25855750 Msa0541850:CDS 50.0%
! GGCCCTAGTAATCTGGAGTT+CGG - chr4_1:25855752-25855771 Msa0541850:CDS 50.0%
CAGCCGAACTCCAGATTACT+AGG + chr4_1:25855758-25855777 None:intergenic 50.0%
! TAATCTGGAGTTCGGCTGTG+TGG - chr4_1:25855760-25855779 Msa0541850:CDS 50.0%
GCTGTGTGGTAAGTAAAGCC+TGG - chr4_1:25855774-25855793 Msa0541850:CDS 50.0%
TTCCTGGGTGGAACAGTTCT+TGG + chr4_1:25855800-25855819 None:intergenic 50.0%
ACCCTAGTTCAATTCCTGGG+TGG + chr4_1:25855812-25855831 None:intergenic 50.0%
AACCACTTGAGCCCATCACT+TGG - chr4_1:25855869-25855888 Msa0541850:CDS 50.0%
!! AACCAAGTGATGGGCTCAAG+TGG + chr4_1:25855874-25855893 None:intergenic 50.0%
!! ATTTCTGGCTCGCAATGTGC+AGG - chr4_1:25855935-25855954 Msa0541850:CDS 50.0%
CTTCTGCTACCCTGGAAGAT+TGG + chr4_1:25856149-25856168 None:intergenic 50.0%
TAAGTACCATCTGGACCTGC+TGG + chr4_1:25856276-25856295 None:intergenic 50.0%
! GGGATGCCATGGAGCGATTT+TGG - chr4_1:25851501-25851520 Msa0541850:intron 55.0%
CTGCTGCCAAAATCGCTCCA+TGG + chr4_1:25851510-25851529 None:intergenic 55.0%
TACCTACCCGCATTAGCTGC+TGG + chr4_1:25852292-25852311 None:intergenic 55.0%
GCCACTTCGAACGAGTCTTC+TGG + chr4_1:25852725-25852744 None:intergenic 55.0%
! CGAAGTGGCTCGGAAAGTGA+AGG - chr4_1:25852736-25852755 Msa0541850:intron 55.0%
TGAACGCTTTCTTGGCCCTG+AGG - chr4_1:25853130-25853149 Msa0541850:CDS 55.0%
CGGGCCAAAGAACAAACCTC+AGG + chr4_1:25853149-25853168 None:intergenic 55.0%
TCCCTTTCCCATCCCCTATC+AGG + chr4_1:25853429-25853448 None:intergenic 55.0%
AGTGCAGGCAATGCACATCC+GGG - chr4_1:25853455-25853474 Msa0541850:intron 55.0%
AGGCAATGCACATCCGGGTT+GGG - chr4_1:25853460-25853479 Msa0541850:intron 55.0%
! ATGCACATCCGGGTTGGGAT+TGG - chr4_1:25853465-25853484 Msa0541850:intron 55.0%
TGGCCCAGAGGCTTATCAGT+CGG - chr4_1:25854000-25854019 Msa0541850:intron 55.0%
ACCAGGACACGTCTAATCCG+AGG - chr4_1:25854670-25854689 Msa0541850:intron 55.0%
! TCCTCGGATTAGACGTGTCC+TGG + chr4_1:25854674-25854693 None:intergenic 55.0%
TCCACAGTCACATCCAGTCG+AGG - chr4_1:25854788-25854807 Msa0541850:intron 55.0%
ACCTCGACTGGATGTGACTG+TGG + chr4_1:25854792-25854811 None:intergenic 55.0%
TCCATTCACCGGTGCTTCCT+CGG + chr4_1:25855083-25855102 None:intergenic 55.0%
GGAAAGGGGCCCTAGTAATC+TGG - chr4_1:25855745-25855764 Msa0541850:CDS 55.0%
CTCTCGAACGATTCGCCCAT+TGG - chr4_1:25855835-25855854 Msa0541850:CDS 55.0%
TCGAACGATTCGCCCATTGG+TGG - chr4_1:25855838-25855857 Msa0541850:CDS 55.0%
AGCTCTGCACCAAGAACGGA+TGG + chr4_1:25855901-25855920 None:intergenic 55.0%
CAGCAGGACGAGAAGCAGCT+GGG + chr4_1:25851009-25851028 None:intergenic 60.0%
ACAGCAGGACGAGAAGCAGC+TGG + chr4_1:25851010-25851029 None:intergenic 60.0%
! AGGCGCTGTCAACGGACTCT+CGG + chr4_1:25851585-25851604 None:intergenic 60.0%
! CGACTCTCAGGCGCTGTCAA+CGG + chr4_1:25851593-25851612 None:intergenic 60.0%
TCTGTGCTTGCTCTCGCTGC+TGG - chr4_1:25851677-25851696 Msa0541850:intron 60.0%
GCCTAGCGGAAAGATGCTGC+CGG - chr4_1:25851794-25851813 Msa0541850:intron 60.0%
GTCCAGCAGCTAATGCGGGT+AGG - chr4_1:25852287-25852306 Msa0541850:intron 60.0%
CAGGCAATGCACATCCGGGT+TGG - chr4_1:25853459-25853478 Msa0541850:intron 60.0%
! TCCGGGTTGGGATTGGAACC+TGG - chr4_1:25853472-25853491 Msa0541850:intron 60.0%
CCCAGGTTCCAATCCCAACC+CGG + chr4_1:25853476-25853495 None:intergenic 60.0%
! CCGGGTTGGGATTGGAACCT+GGG - chr4_1:25853473-25853492 Msa0541850:intron 60.0%
TAAGGCGCGCTTCAGCTGCA+AGG + chr4_1:25854228-25854247 None:intergenic 60.0%
GCAGCTGAAGCGCGCCTTAA+TGG - chr4_1:25854229-25854248 Msa0541850:CDS 60.0%
GTGTGGGACACGACAACACC+AGG - chr4_1:25854653-25854672 Msa0541850:intron 60.0%
! TCTTGCTCCCGAGGAAGCAC+CGG - chr4_1:25855072-25855091 Msa0541850:CDS 60.0%
CCATTCACCGGTGCTTCCTC+GGG + chr4_1:25855082-25855101 None:intergenic 60.0%
GGGTGGAACAGTTCTTGGCC+AGG + chr4_1:25855795-25855814 None:intergenic 60.0%
GGCCAAGAACTGTTCCACCC+AGG - chr4_1:25855795-25855814 Msa0541850:CDS 60.0%
TGGTTGCCAGCAGGTCCAGA+TGG - chr4_1:25856267-25856286 Msa0541850:CDS 60.0%
GCCGGCAGCATCTTTCCGCT+AGG + chr4_1:25851798-25851817 None:intergenic 65.0%
!! CCCGAGGAAGCACCGGTGAA+TGG - chr4_1:25855079-25855098 Msa0541850:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 25850683 25856609 25850683 ID=Msa0541850;Name=Msa0541850
chr4_1 mRNA 25850683 25856609 25850683 ID=Msa0541850-mRNA-1;Parent=Msa0541850;Name=Msa0541850-mRNA-1;_AED=0.05;_eAED=0.05;_QI=318|1|1|1|1|1|9|572|428
chr4_1 exon 25850683 25851335 25850683 ID=Msa0541850-mRNA-1:exon:7015;Parent=Msa0541850-mRNA-1
chr4_1 exon 25852399 25852497 25852399 ID=Msa0541850-mRNA-1:exon:7014;Parent=Msa0541850-mRNA-1
chr4_1 exon 25853031 25853156 25853031 ID=Msa0541850-mRNA-1:exon:7013;Parent=Msa0541850-mRNA-1
chr4_1 exon 25853491 25853601 25853491 ID=Msa0541850-mRNA-1:exon:7012;Parent=Msa0541850-mRNA-1
chr4_1 exon 25854141 25854260 25854141 ID=Msa0541850-mRNA-1:exon:7011;Parent=Msa0541850-mRNA-1
chr4_1 exon 25854499 25854591 25854499 ID=Msa0541850-mRNA-1:exon:7010;Parent=Msa0541850-mRNA-1
chr4_1 exon 25854988 25855134 25854988 ID=Msa0541850-mRNA-1:exon:7009;Parent=Msa0541850-mRNA-1
chr4_1 exon 25855577 25856036 25855577 ID=Msa0541850-mRNA-1:exon:7008;Parent=Msa0541850-mRNA-1
chr4_1 exon 25856242 25856609 25856242 ID=Msa0541850-mRNA-1:exon:7007;Parent=Msa0541850-mRNA-1
chr4_1 five_prime_UTR 25856292 25856609 25856292 ID=Msa0541850-mRNA-1:five_prime_utr;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25856242 25856291 25856242 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25855577 25856036 25855577 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25854988 25855134 25854988 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25854499 25854591 25854499 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25854141 25854260 25854141 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25853491 25853601 25853491 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25853031 25853156 25853031 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25852399 25852497 25852399 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 CDS 25851255 25851335 25851255 ID=Msa0541850-mRNA-1:cds;Parent=Msa0541850-mRNA-1
chr4_1 three_prime_UTR 25850683 25851254 25850683 ID=Msa0541850-mRNA-1:three_prime_utr;Parent=Msa0541850-mRNA-1
Gene Sequence

>Msa0541850

ATGGACCCAGCTGCTTCTCGTCCTGCTGTTGTCATCGACAATGGCTCCGGGTATACGAAAATGGGCTTTGCTGGTAATGTTGAACCTTGTTTTATTGTTCCTAGTGTGGTTGCGATTAACGAGTCGTTTCTGAATCAATCGAGAAGTTCTTCTAAAGGAAATTGGATTGCTCAGCATAATGCTGGGGTTATGGCTGATCTTGATTTCTTTATTGGAGATGATGCTCTTTCTAAGTCTCGATCTAGTAGTACTTATAATCTCACTTACCCGATTAAGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGATTTTGGCAGCAGTGTATATTCAATTATTTGCGGTGTGATCCTGAGGATCATTATTTTCTTTTGACCGAGAGTCCGTTGACAGCGCCTGAGAGTCGTGAGTATACTGGGGAAATTATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCCGTGAATTCTGTGCTTGCTCTCGCTGCTGGCTACACTACGTCTAAGTGTGAGATGACAGGAGTCGTAGTTGATATCGGAGATGGGGCTACACATGTTGTACCAGTTGCGGATGGTTATGTTATTGGAAGTAGCATCAAATCAGTTCCTATTGCGGGAAAGGATGTTACTCTTTTCGTCCAGCAGCTAATGCGGGAAAGAGGAGAGAATATACCACCAGAAGACTCGTTCGAAGTGGCTCGGAAAGTGAAGGAAATGCATTGCTACACCTGCTCTGACATAGTTAAGGAATATAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGAGAGGCGTTAAACCAAAGACTGGGGCTCCATATTCTTGTGATATTGGCTATGAACGCTTTCTTGGCCCTGAGGTTTTCTTTAATCCCGAGATATATAGCAGCGACTTCACCACTCCTTTGCCTGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATATAAGAATATAGTGTTGTCAGGAGGATCAACAATGTTCAAGGATTTTCACAGGAGATTACAACGTGATATAAAGAAAATAGTTGATGCTCGTGTCCTTGCAGCTGAAGCGCGCCTTAATGGAGAGATAAAATCACATCCAGTCGAGGTCAATGTACTCAGCCATCCTATCCAAAGATTTGCAGTTTGGTTTGGTGGATCAGTGCTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATACGAAGAATATGGAGCAAGCATTTGCCGCACAAATCCTGTTTTCAAGGGGATGTATTAA
Protein sequence

>Msa0541850

MDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPSVVAINESFLNQSRSSSKGNWIAQHNAGVMADLDFFIGDDALSKSRSSSTYNLTYPIKHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENIPPEDSFEVARKVKEMHCYTCSDIVKEYNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDIKKIVDARVLAAEARLNGEIKSHPVEVNVLSHPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY*