AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0543620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0543620 MtrunA17_Chr4g0023801 93.211 545 16 2 1 524 1 545 0.0 1037
Msa0543620 MtrunA17_Chr4g0037661 33.275 568 305 14 6 523 5 548 2.20e-88 282
Msa0543620 MtrunA17_Chr2g0280541 36.735 441 223 10 75 485 3 417 1.87e-85 271
Msa0543620 MtrunA17_Chr1g0163311 33.816 553 283 14 5 506 4 524 3.27e-85 273
Msa0543620 MtrunA17_Chr2g0303541 29.947 571 307 14 14 514 35 582 3.91e-56 198
Msa0543620 MtrunA17_Chr8g0374011 30.616 552 296 16 48 521 82 624 1.07e-54 195
Msa0543620 MtrunA17_Chr2g0320691 27.719 570 332 16 7 511 26 580 3.31e-51 185
Msa0543620 MtrunA17_Chr7g0245201 30.036 556 294 20 5 493 49 576 6.54e-50 181
Msa0543620 MtrunA17_Chr2g0285511 27.036 577 310 18 14 517 35 573 2.16e-48 176
Msa0543620 MtrunA17_Chr1g0199631 29.496 556 297 17 29 519 14 539 1.26e-46 171
Msa0543620 MtrunA17_Chr4g0010091 28.036 560 326 16 17 522 46 582 6.85e-46 170
Msa0543620 MtrunA17_Chr1g0181181 27.125 553 290 19 14 501 35 539 1.50e-44 165
Msa0543620 MtrunA17_Chr2g0279481 26.929 609 328 18 14 522 53 644 3.02e-43 163
Msa0543620 MtrunA17_Chr4g0050021 26.403 606 314 18 7 509 47 623 3.38e-42 160
Msa0543620 MtrunA17_Chr5g0401451 27.208 566 337 20 11 522 43 587 1.38e-41 158
Msa0543620 MtrunA17_Chr1g0195911 26.334 581 334 17 7 522 39 590 4.67e-41 156
Msa0543620 MtrunA17_Chr7g0268781 25.868 576 333 16 14 522 45 593 1.51e-37 146
Msa0543620 MtrunA17_Chr1g0207461 27.051 451 273 12 52 452 74 518 3.05e-36 142
Msa0543620 MtrunA17_Chr4g0053841 26.038 530 318 16 14 493 22 527 3.87e-35 139
Msa0543620 MtrunA17_Chr4g0076521 28.770 431 244 15 40 422 60 475 4.19e-35 139
Msa0543620 MtrunA17_Chr5g0412591 26.915 457 215 15 48 422 70 489 5.66e-35 138
Msa0543620 MtrunA17_Chr8g0382231 24.719 445 237 11 50 424 97 513 2.35e-34 137
Msa0543620 MtrunA17_Chr5g0401341 26.667 465 268 13 14 422 36 483 3.73e-33 133
Msa0543620 MtrunA17_Chr3g0108331 24.092 523 299 15 14 485 33 508 1.60e-30 125
Msa0543620 MtrunA17_Chr1g0150191 25.383 457 285 11 14 420 36 486 3.17e-30 124
Msa0543620 MtrunA17_Chr1g0191711 25.508 443 264 12 14 420 67 479 7.15e-30 123
Msa0543620 MtrunA17_Chr2g0290741 26.667 420 237 16 50 422 70 465 6.87e-27 114
Msa0543620 MtrunA17_Chr8g0367891 24.832 447 244 13 43 422 63 484 2.55e-26 112
Msa0543620 MtrunA17_Chr5g0432861 22.635 539 302 14 14 493 34 516 1.55e-25 110
Msa0543620 MtrunA17_Chr2g0332281 30.797 276 147 7 257 507 106 362 1.79e-24 105
Msa0543620 MtrunA17_Chr4g0003891 25.668 374 228 10 185 519 39 401 8.14e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0543620 AT3G22104.1 46.533 548 227 8 1 524 1 506 1.91e-152 446
Msa0543620 AT3G22104.4 45.127 472 193 8 77 524 2 431 7.58e-119 357
Msa0543620 AT3G22104.2 45.127 472 193 8 77 524 2 431 7.58e-119 357
Msa0543620 AT3G22104.3 45.127 472 193 8 77 524 2 431 7.58e-119 357
Msa0543620 AT3G19850.1 33.216 566 314 16 6 523 5 554 1.07e-83 270
Msa0543620 AT1G50280.1 33.619 467 247 14 7 419 6 463 2.14e-63 216
Msa0543620 AT1G50280.2 34.129 419 217 13 51 419 21 430 1.01e-57 200
Msa0543620 AT5G66560.3 31.144 533 298 12 43 511 71 598 4.32e-56 199
Msa0543620 AT5G66560.4 31.144 533 298 12 43 511 61 588 4.35e-56 198
Msa0543620 AT5G66560.1 30.741 540 291 14 43 511 100 627 5.16e-56 199
Msa0543620 AT3G08570.1 27.768 569 310 17 7 513 37 566 6.31e-53 189
Msa0543620 AT3G50840.1 28.571 553 318 14 7 517 19 536 2.88e-50 181
Msa0543620 AT5G66560.2 35.325 385 208 10 43 391 100 479 1.53e-49 177
Msa0543620 AT3G50840.2 29.586 507 287 12 50 517 25 500 4.38e-49 177
Msa0543620 AT3G50840.3 29.586 507 287 12 50 517 25 500 4.38e-49 177
Msa0543620 AT1G30440.1 28.621 573 326 15 14 514 35 596 6.02e-48 176
Msa0543620 AT5G48800.1 29.055 561 328 19 7 522 44 579 1.80e-47 174
Msa0543620 AT5G03250.1 26.399 572 322 15 14 519 35 573 1.60e-45 169
Msa0543620 AT5G13600.1 27.866 567 306 20 15 517 36 563 3.36e-45 168
Msa0543620 AT3G44820.1 25.668 561 330 13 18 504 36 583 2.74e-44 166
Msa0543620 AT3G08660.1 27.828 557 310 19 10 521 40 549 5.10e-44 164
Msa0543620 AT1G03010.2 28.209 592 323 20 7 524 12 575 7.09e-43 161
Msa0543620 AT1G03010.3 28.041 592 324 20 7 524 38 601 1.04e-42 161
Msa0543620 AT3G08660.3 28.046 517 283 17 50 521 17 489 1.05e-42 159
Msa0543620 AT1G03010.1 28.041 592 324 20 7 524 39 602 1.19e-42 161
Msa0543620 AT5G67385.1 28.289 456 269 13 14 424 34 476 1.98e-39 152
Msa0543620 AT2G47860.1 27.208 566 311 18 7 504 40 572 5.76e-39 150
Msa0543620 AT5G67385.4 28.539 438 255 13 32 424 7 431 1.26e-38 149
Msa0543620 AT5G67385.5 28.539 438 255 13 32 424 7 431 1.26e-38 149
Msa0543620 AT5G67385.2 28.539 438 255 13 32 424 7 431 1.26e-38 149
Msa0543620 AT5G67385.3 28.539 438 255 13 32 424 7 431 1.26e-38 149
Msa0543620 AT2G47860.3 27.746 519 279 16 54 504 105 595 2.52e-37 146
Msa0543620 AT2G23050.1 27.638 398 232 10 52 420 78 448 2.39e-36 141
Msa0543620 AT3G08660.2 28.607 402 241 11 10 391 40 415 5.91e-36 139
Msa0543620 AT2G14820.2 27.152 453 267 13 53 450 74 518 1.03e-34 138
Msa0543620 AT2G14820.1 27.152 453 267 13 53 450 74 518 1.03e-34 138
Msa0543620 AT5G47800.3 27.546 432 239 14 43 420 63 474 1.38e-34 137
Msa0543620 AT5G47800.1 27.546 432 239 14 43 420 63 474 1.38e-34 137
Msa0543620 AT5G47800.4 27.546 432 239 14 43 420 63 474 1.38e-34 137
Msa0543620 AT5G47800.2 27.546 432 239 14 43 420 176 587 3.80e-34 137
Msa0543620 AT3G26490.1 28.105 459 242 14 52 436 75 519 1.32e-33 135
Msa0543620 AT3G26490.3 28.105 459 242 14 52 436 75 519 1.32e-33 135
Msa0543620 AT3G26490.4 28.105 459 242 14 52 436 75 519 1.32e-33 135
Msa0543620 AT3G49970.1 25.692 506 287 15 17 493 6 451 5.75e-33 132
Msa0543620 AT3G49970.2 25.692 506 287 15 17 493 6 451 5.75e-33 132
Msa0543620 AT2G47860.4 28.904 429 236 14 7 391 40 443 1.12e-32 130
Msa0543620 AT5G03250.2 25.155 485 267 12 100 519 8 461 1.23e-32 130
Msa0543620 AT3G26490.2 28.186 408 227 12 52 405 75 470 3.58e-32 129
Msa0543620 AT5G67440.3 24.644 491 301 15 10 455 32 498 2.83e-31 128
Msa0543620 AT5G67440.1 24.644 491 301 15 10 455 32 498 2.83e-31 128
Msa0543620 AT2G47860.6 29.843 382 204 12 54 391 105 466 4.65e-31 126
Msa0543620 AT5G67440.2 24.788 472 286 15 29 455 14 461 1.75e-30 125
Msa0543620 AT1G67900.5 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT1G67900.1 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT1G67900.3 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT1G67900.6 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT1G67900.2 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT1G67900.4 25.721 451 245 12 52 422 69 509 1.96e-30 125
Msa0543620 AT2G30520.1 26.509 464 259 11 14 425 39 472 8.90e-30 123
Msa0543620 AT2G30520.2 26.712 438 240 10 40 425 16 424 2.49e-28 119
Msa0543620 AT2G30520.3 26.712 438 240 10 40 425 16 424 2.49e-28 119
Msa0543620 AT4G37590.1 27.158 475 264 16 14 437 36 479 1.23e-27 117
Msa0543620 AT4G31820.1 25.299 502 295 18 7 460 26 495 3.06e-27 115
Msa0543620 AT2G47860.5 26.105 475 257 14 98 504 6 454 1.41e-25 110
Msa0543620 AT2G47860.2 26.105 475 257 14 98 504 6 454 1.41e-25 110
Msa0543620 AT4G31820.2 25.106 470 276 16 35 460 5 442 1.92e-25 110
Msa0543620 AT2G23050.2 26.257 358 209 9 92 420 1 332 9.15e-25 106
Msa0543620 AT1G52770.1 29.712 313 175 8 236 519 96 392 1.75e-22 100
Msa0543620 AT3G15570.1 27.974 311 175 6 236 516 101 392 3.31e-21 96.7
Msa0543620 AT5G64330.1 30.029 343 167 10 245 522 376 710 4.99e-21 97.4
Msa0543620 AT5G64330.1 24.590 244 140 7 14 229 61 288 4.54e-15 79.0
Msa0543620 AT5G64330.2 31.765 255 112 6 245 442 376 625 5.05e-20 94.4
Msa0543620 AT5G64330.2 24.590 244 140 7 14 229 61 288 2.83e-15 79.3
Msa0543620 AT5G64330.3 31.765 255 112 6 245 442 317 566 6.49e-20 93.6
Msa0543620 AT5G64330.3 25.714 210 113 6 48 229 35 229 1.44e-14 77.0
Msa0543620 AT5G10250.2 26.027 292 159 7 260 516 311 580 1.45e-19 92.8
Msa0543620 AT5G10250.2 33.600 125 80 3 7 131 53 174 1.45e-12 70.5
Msa0543620 AT5G10250.1 25.979 281 158 6 260 516 311 565 1.92e-17 85.9
Msa0543620 AT5G10250.1 33.600 125 80 3 7 131 53 174 1.70e-12 70.5

Find 104 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTTCAAAACATTATT+TGG 0.102995 4_1:+30141073 Msa0543620:CDS
AGCAAATTGGCTAAAGTATT+TGG 0.117951 4_1:+30140380 Msa0543620:CDS
GTCAATGCTTTCGAGTAAAT+TGG 0.197083 4_1:+30140922 Msa0543620:CDS
CGAAAGTGTTTCTAACTTAC+TGG 0.232347 4_1:+30140580 Msa0543620:CDS
CGGTTCAAGGGATTAGTTAT+TGG 0.270197 4_1:+30140618 Msa0543620:CDS
CGAATGACAGTTCAGGGATT+AGG 0.302390 4_1:+30140786 Msa0543620:CDS
ATCATTGTATGGAGTTGAAA+TGG 0.302995 4_1:-30142116 None:intergenic
AAACATTATTTGGGATTCTT+CGG 0.325788 4_1:+30141083 Msa0543620:CDS
TACTCAATACTCGAGCAAAT+TGG 0.347083 4_1:+30140367 Msa0543620:CDS
AATCTTGAAGTGGATGTAAA+TGG 0.347819 4_1:+30139161 Msa0543620:CDS
AACATTATTTGGGATTCTTC+GGG 0.354248 4_1:+30141084 Msa0543620:CDS
ATACAACACAACTTGTTCAT+TGG 0.360188 4_1:-30142188 None:intergenic
TTTCTTTCAAAACATTATTT+GGG 0.363196 4_1:+30141074 Msa0543620:CDS
AAAGAATCCCTAGCAGAATC+TGG 0.366057 4_1:-30141406 None:intergenic
GATTATGATTGGTTCACAAT+TGG 0.371651 4_1:+30141153 Msa0543620:CDS
TGTAGTTGGGAGGCTGGTTT+CGG 0.375981 4_1:+30140730 Msa0543620:CDS
AGTTGTTCGAATGACAGTTC+AGG 0.376305 4_1:+30140779 Msa0543620:CDS
AGGAATGCAGTGGAGGGTTA+TGG 0.389720 4_1:+30142264 Msa0543620:CDS
TTCAAGTGGTTCTTCTCAAA+AGG 0.390409 4_1:+30142150 Msa0543620:CDS
AATAAGTTGGAGATTATGAT+TGG 0.392496 4_1:+30141142 Msa0543620:CDS
GAAAGACAAAACCAAGGAAA+AGG 0.412154 4_1:-30138967 None:intergenic
GGATGCTGTAGTTGGGAGGC+TGG 0.417675 4_1:+30140724 Msa0543620:CDS
TTTCTAGTTATTATGGAAGA+AGG 0.429606 4_1:+30139131 Msa0543620:exon
AGAAACTTTCATGGTGGATA+AGG 0.429758 4_1:+30139187 Msa0543620:CDS
AGGTTGAATATCGAAATTTC+CGG 0.430532 4_1:-30142212 None:intergenic
TGGATCATTATGTTATAAGT+AGG 0.433791 4_1:+30140942 Msa0543620:CDS
GCAACTTTCCGCATCTGAAC+GGG 0.435207 4_1:-30141298 None:intergenic
AATGGGGATGGAAGAGGAAA+AGG 0.439990 4_1:-30139059 None:intergenic
TGAACATAAGTAAATGTAGT+AGG 0.441739 4_1:+30141119 Msa0543620:CDS
GTGTTCCTGCGGCAAGGAAC+TGG 0.443397 4_1:+30141265 Msa0543620:CDS
GAAGTGCAAAATCGTTGAAA+TGG 0.446736 4_1:+30141015 Msa0543620:CDS
TCAAAACCTTCTGCGCCTCC+TGG 0.447820 4_1:-30140452 None:intergenic
TCTGATGCTAGAGAAGTGTT+TGG 0.449847 4_1:+30140703 Msa0543620:CDS
AAAGCATCTGGTCATAGTTA+TGG 0.455369 4_1:+30142343 Msa0543620:CDS
GGAAAAGGGTTGTGGTCAAT+TGG 0.456525 4_1:-30138952 None:intergenic
TTACCAACATGATAACCATC+TGG 0.456686 4_1:-30140898 None:intergenic
TTGCTTGTTCCATCTCCCTA+TGG 0.458028 4_1:+30141196 Msa0543620:CDS
CCACACAAAGAATCATTGTA+TGG 0.462883 4_1:-30142127 None:intergenic
ATGACAAAATCAAAAGCATC+TGG 0.463126 4_1:+30142331 Msa0543620:CDS
GGGTTATAGTTGTGTTGGAA+TGG 0.469151 4_1:-30138905 None:intergenic
TCATTGTATGGAGTTGAAAT+GGG 0.472028 4_1:-30142115 None:intergenic
CAAATTTCACTCGTTCGACT+TGG 0.473240 4_1:+30140846 Msa0543620:CDS
TTCTGTTATAACAATGGAAA+AGG 0.474857 4_1:+30140488 Msa0543620:CDS
ATATAAGTAGTTTATTCCAT+AGG 0.480644 4_1:-30141212 None:intergenic
AGTGTTTGGATGCTGTAGTT+GGG 0.482062 4_1:+30140717 Msa0543620:CDS
TAAATGTAGTAGGAATAAGT+TGG 0.484168 4_1:+30141129 Msa0543620:CDS
AAGTGTTTGGATGCTGTAGT+TGG 0.484528 4_1:+30140716 Msa0543620:CDS
GGAAAATCAAGTGGTGGAAG+TGG 0.490165 4_1:+30140401 Msa0543620:CDS
ATTTCACTCGTTCGACTTGG+TGG 0.490861 4_1:+30140849 Msa0543620:CDS
AAGAGTCATGAACATAGCTT+TGG 0.491223 4_1:-30142376 None:intergenic
TATAAGTAGTTTATTCCATA+GGG 0.496705 4_1:-30141211 None:intergenic
GTTGTTCGAATGACAGTTCA+GGG 0.497978 4_1:+30140780 Msa0543620:CDS
AAATGGAGAAGAAACTTTCA+TGG 0.499209 4_1:+30139178 Msa0543620:CDS
TCAAGTGGTTCTTCTCAAAA+GGG 0.512620 4_1:+30142151 Msa0543620:CDS
AAAGACAAAACCAAGGAAAA+GGG 0.518371 4_1:-30138966 None:intergenic
CAGCTCTTCCAGATTCTGCT+AGG 0.520217 4_1:+30141398 Msa0543620:CDS
CCATACAATGATTCTTTGTG+TGG 0.523116 4_1:+30142127 Msa0543620:CDS
AAGGGATTAGTTATTGGTCA+TGG 0.523562 4_1:+30140624 Msa0543620:CDS
GAGACAGAAGTAGTGCGGTT+GGG 0.532780 4_1:-30138925 None:intergenic
TACCAACATGATAACCATCT+GGG 0.536405 4_1:-30140897 None:intergenic
CGGTTGGGTTATAGTTGTGT+TGG 0.537400 4_1:-30138910 None:intergenic
ACAATTGGATCAAGTAACAT+TGG 0.540829 4_1:+30141168 Msa0543620:CDS
GTTTCTTCTGTATTATCAGA+AGG 0.541194 4_1:+30140964 Msa0543620:CDS
CCGCACCAGTTCCTTGCCGC+AGG 0.541269 4_1:-30141270 None:intergenic
TAGTTTATTCCATAGGGAGA+TGG 0.542308 4_1:-30141205 None:intergenic
TTAAGATTCTGTTATAACAA+TGG 0.544300 4_1:+30140482 Msa0543620:CDS
TCCCCAGATGGTTATCATGT+TGG 0.544832 4_1:+30140895 Msa0543620:CDS
AGCAACTTTCCGCATCTGAA+CGG 0.556641 4_1:-30141299 None:intergenic
AGAGACAGAAGTAGTGCGGT+TGG 0.558217 4_1:-30138926 None:intergenic
ACATGAAGTGATATTCTAAG+AGG 0.561631 4_1:-30139017 None:intergenic
AAAACCAAGGAAAAGGGTTG+TGG 0.564062 4_1:-30138960 None:intergenic
AGCTCTTCCAGATTCTGCTA+GGG 0.564119 4_1:+30141399 Msa0543620:CDS
TTGAAAGTGTTCCTGCGGCA+AGG 0.565024 4_1:+30141259 Msa0543620:CDS
TGATGAACTCTACCATGCAA+TGG 0.566425 4_1:+30141429 Msa0543620:CDS
ATTTGCAAGGAATGCAGTGG+AGG 0.572628 4_1:+30142257 Msa0543620:CDS
GATTCTTTGTGTGGTTCAAG+TGG 0.575011 4_1:+30142136 Msa0543620:CDS
CGCGCGAGTAACAGATTCGA+AGG 0.577244 4_1:-30140521 None:intergenic
ATATGCATTACGAAATAGAC+CGG 0.586731 4_1:+30141044 Msa0543620:CDS
GTTACATATAATATGTGTGG+AGG 0.588032 4_1:-30138822 None:intergenic
AGGTTTCTGTAATCTTGAAG+TGG 0.588076 4_1:+30139151 Msa0543620:CDS
TTCGAACAACTCGAGGGACA+CGG 0.589174 4_1:-30140767 None:intergenic
GCGTTGTGCTGCTGAATACA+TGG 0.598711 4_1:+30140541 Msa0543620:CDS
CGGTTGCTCCCGTTCAGATG+CGG 0.601268 4_1:+30141290 Msa0543620:CDS
AAAGTATTTGGAAAATCAAG+TGG 0.604972 4_1:+30140392 Msa0543620:CDS
GAACAAGTTGTGTTGTATGC+CGG 0.605824 4_1:+30142193 Msa0543620:CDS
AACATTTGCAAGGAATGCAG+TGG 0.611430 4_1:+30142254 Msa0543620:CDS
CTTCTCATCTGTAGTAGCAG+TGG 0.611616 4_1:-30140996 None:intergenic
CGAGATACATGTCCATTGCA+TGG 0.615686 4_1:-30141441 None:intergenic
AAAATGAAAGAACATTTGCA+AGG 0.616420 4_1:+30142244 Msa0543620:CDS
TTTGCAAGGAATGCAGTGGA+GGG 0.620645 4_1:+30142258 Msa0543620:CDS
GTTTGGATGCTGTAGTTGGG+AGG 0.620714 4_1:+30140720 Msa0543620:CDS
AGTGTTACATATAATATGTG+TGG 0.624792 4_1:-30138825 None:intergenic
GAAAGGTGTAGGCATGCTTG+TGG 0.632184 4_1:-30142001 None:intergenic
TGCAATGGACATGTATCTCG+AGG 0.652835 4_1:+30141444 Msa0543620:CDS
GTATTTGGAAAATCAAGTGG+TGG 0.653932 4_1:+30140395 Msa0543620:CDS
AAGACAGAAAGACAAAACCA+AGG 0.657843 4_1:-30138973 None:intergenic
ACTGTCATTCGAACAACTCG+AGG 0.659603 4_1:-30140774 None:intergenic
AATGGATACAACAAGGACAA+AGG 0.667374 4_1:-30138887 None:intergenic
CCTGCGGCAAGGAACTGGTG+CGG 0.676159 4_1:+30141270 Msa0543620:CDS
TGGAGAAGAAACTTTCATGG+TGG 0.676896 4_1:+30139181 Msa0543620:CDS
ACCAACATGATAACCATCTG+GGG 0.676918 4_1:-30140896 None:intergenic
CTGTCATTCGAACAACTCGA+GGG 0.677499 4_1:-30140773 None:intergenic
GTGCAGAGACAGAAGTAGTG+CGG 0.703525 4_1:-30138930 None:intergenic
GTGTTGGAATGGATACAACA+AGG 0.725933 4_1:-30138894 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTGTATGTTTTAAT+AGG + chr4_1:30139501-30139520 Msa0543620:intron 10.0%
!! TATAAAAATAGGAAAATATA+TGG - chr4_1:30140167-30140186 None:intergenic 10.0%
!!! TAATCTAAAATTGTTTAAAT+TGG + chr4_1:30140325-30140344 Msa0543620:intron 10.0%
!!! TCAAAATTTAAAATTCAAAA+TGG - chr4_1:30141484-30141503 None:intergenic 10.0%
!!! ATTTTTCTTTCTAGTTATTA+TGG + chr4_1:30139124-30139143 Msa0543620:exon 15.0%
!! TTTATATTATAGGATTTACA+AGG + chr4_1:30139546-30139565 Msa0543620:intron 15.0%
!!! CTTTAATTTAGAAATGATTA+TGG + chr4_1:30139627-30139646 Msa0543620:intron 15.0%
!! GTGAAAATAAAAAATTACTA+GGG - chr4_1:30139666-30139685 None:intergenic 15.0%
!! AGTGAAAATAAAAAATTACT+AGG - chr4_1:30139667-30139686 None:intergenic 15.0%
!! AAAAAATAATAAATCAAGCA+TGG - chr4_1:30140026-30140045 None:intergenic 15.0%
!! TTTCTTTCAAAACATTATTT+GGG + chr4_1:30141074-30141093 Msa0543620:CDS 15.0%
!!! TTTAAAAACTTCAAAGTTTT+TGG + chr4_1:30141366-30141385 Msa0543620:CDS 15.0%
!!! ATAAAGATTTCTTACAATTT+TGG - chr4_1:30141709-30141728 None:intergenic 15.0%
!! GTACTAGTAGTTTATATTAT+AGG + chr4_1:30139536-30139555 Msa0543620:intron 20.0%
!! TTGGTTATTATGATGATTAA+TGG + chr4_1:30139577-30139596 Msa0543620:intron 20.0%
!! ATTTAGGTGCAAATTTATTA+TGG - chr4_1:30139734-30139753 None:intergenic 20.0%
!!! TTTTTGTTAACATTTTTGAC+AGG + chr4_1:30139955-30139974 Msa0543620:intron 20.0%
!!! TTTCTGTGCTTTAATTATTT+TGG + chr4_1:30140122-30140141 Msa0543620:intron 20.0%
!!! ATGTTTTTGGTAAGTTATTT+TGG + chr4_1:30140225-30140244 Msa0543620:intron 20.0%
!!! TGTTTAATTTCTTTCTAGTT+TGG + chr4_1:30140248-30140267 Msa0543620:intron 20.0%
!! TTAAGATTCTGTTATAACAA+TGG + chr4_1:30140482-30140501 Msa0543620:CDS 20.0%
!! GTTTCTTTCAAAACATTATT+TGG + chr4_1:30141073-30141092 Msa0543620:CDS 20.0%
!! TATAAGTAGTTTATTCCATA+GGG - chr4_1:30141214-30141233 None:intergenic 20.0%
!! ATATAAGTAGTTTATTCCAT+AGG - chr4_1:30141215-30141234 None:intergenic 20.0%
!!! AACTTTGAAGTTTTTAAACA+AGG - chr4_1:30141364-30141383 None:intergenic 20.0%
!!! AATTTTGAAGTCTATAACTT+TGG + chr4_1:30141496-30141515 Msa0543620:intron 20.0%
!! TAACATAGTAAATTTGAATG+CGG + chr4_1:30141672-30141691 Msa0543620:intron 20.0%
!!! TTTCTTACAATTTTGGATAA+GGG - chr4_1:30141702-30141721 None:intergenic 20.0%
!!! ATTTCTTACAATTTTGGATA+AGG - chr4_1:30141703-30141722 None:intergenic 20.0%
! AGTGTTACATATAATATGTG+TGG - chr4_1:30138828-30138847 None:intergenic 25.0%
! TCAGTTGAGAAAACAAAAAT+GGG - chr4_1:30139079-30139098 None:intergenic 25.0%
! TTCAGTTGAGAAAACAAAAA+TGG - chr4_1:30139080-30139099 None:intergenic 25.0%
!!! TTTCTAGTTATTATGGAAGA+AGG + chr4_1:30139131-30139150 Msa0543620:exon 25.0%
!!! TTTTTTGTAAAGTGTATGTC+TGG + chr4_1:30139213-30139232 Msa0543620:intron 25.0%
! TACAATCATAAAGTTACCAA+GGG - chr4_1:30139699-30139718 None:intergenic 25.0%
! CAAAAACAAACAAAATACGA+AGG - chr4_1:30139941-30139960 None:intergenic 25.0%
! GACAATAAATTGTAGAATGA+GGG - chr4_1:30140075-30140094 None:intergenic 25.0%
! AGACAATAAATTGTAGAATG+AGG - chr4_1:30140076-30140095 None:intergenic 25.0%
! AAGTAAGCAGGTATAAAAAT+AGG - chr4_1:30140178-30140197 None:intergenic 25.0%
!!! CTCTAGTTATTTCATGTTTT+TGG + chr4_1:30140212-30140231 Msa0543620:intron 25.0%
!!! GGTTTAATTTCTTTCTAGTT+TGG + chr4_1:30140269-30140288 Msa0543620:intron 25.0%
!! AAAGTATTTGGAAAATCAAG+TGG + chr4_1:30140392-30140411 Msa0543620:CDS 25.0%
!! GTAATATTTCATGATTTTCC+AGG + chr4_1:30140434-30140453 Msa0543620:CDS 25.0%
! TTCTGTTATAACAATGGAAA+AGG + chr4_1:30140488-30140507 Msa0543620:CDS 25.0%
! TGGATCATTATGTTATAAGT+AGG + chr4_1:30140942-30140961 Msa0543620:CDS 25.0%
!! AAACATTATTTGGGATTCTT+CGG + chr4_1:30141083-30141102 Msa0543620:CDS 25.0%
! TGAACATAAGTAAATGTAGT+AGG + chr4_1:30141119-30141138 Msa0543620:CDS 25.0%
! TAAATGTAGTAGGAATAAGT+TGG + chr4_1:30141129-30141148 Msa0543620:CDS 25.0%
!! AATAAGTTGGAGATTATGAT+TGG + chr4_1:30141142-30141161 Msa0543620:CDS 25.0%
! CTTTCAAAAATCTCAAAACA+AGG - chr4_1:30141246-30141265 None:intergenic 25.0%
! AATCTTTATCTTCTACTCAT+TGG + chr4_1:30141720-30141739 Msa0543620:intron 25.0%
! TAATCACATCTACATCAAAA+CGG + chr4_1:30141852-30141871 Msa0543620:intron 25.0%
! ATAATTTCCTCTTCTGTTAT+AGG + chr4_1:30141910-30141929 Msa0543620:intron 25.0%
!! TCTTTCATTTTCTCATTATC+AGG - chr4_1:30142235-30142254 None:intergenic 25.0%
! AAAATGAAAGAACATTTGCA+AGG + chr4_1:30142244-30142263 Msa0543620:CDS 25.0%
AAAGACAAAACCAAGGAAAA+GGG - chr4_1:30138969-30138988 None:intergenic 30.0%
ACATGAAGTGATATTCTAAG+AGG - chr4_1:30139020-30139039 None:intergenic 30.0%
CAGTTGAGAAAACAAAAATG+GGG - chr4_1:30139078-30139097 None:intergenic 30.0%
AATCTTGAAGTGGATGTAAA+TGG + chr4_1:30139161-30139180 Msa0543620:CDS 30.0%
AAATGGAGAAGAAACTTTCA+TGG + chr4_1:30139178-30139197 Msa0543620:CDS 30.0%
! GATTTACAAGGTTTGTCTTT+TGG + chr4_1:30139558-30139577 Msa0543620:intron 30.0%
CTACAATCATAAAGTTACCA+AGG - chr4_1:30139700-30139719 None:intergenic 30.0%
AGGTGCAAATTTATTATGGA+TGG - chr4_1:30139730-30139749 None:intergenic 30.0%
!! AAAAAAGTGTCTTGTGTTTG+TGG - chr4_1:30139824-30139843 None:intergenic 30.0%
! ATGGTCTTCTAATGCTTTTA+TGG + chr4_1:30139911-30139930 Msa0543620:intron 30.0%
GAAACCAAAAACATTGAATG+AGG - chr4_1:30140106-30140125 None:intergenic 30.0%
! AGCAAATTGGCTAAAGTATT+TGG + chr4_1:30140380-30140399 Msa0543620:CDS 30.0%
! ATATTTCATGATTTTCCAGG+AGG + chr4_1:30140437-30140456 Msa0543620:CDS 30.0%
ACTGGATCAAACTGAAAAAT+CGG + chr4_1:30140598-30140617 Msa0543620:CDS 30.0%
! AAACTGAAAAATCGGTTCAA+GGG + chr4_1:30140606-30140625 Msa0543620:CDS 30.0%
GTTTCTTCTGTATTATCAGA+AGG + chr4_1:30140964-30140983 Msa0543620:CDS 30.0%
ATATGCATTACGAAATAGAC+CGG + chr4_1:30141044-30141063 Msa0543620:CDS 30.0%
!! TTTTGAAAGAAACAGAACTC+CGG - chr4_1:30141066-30141085 None:intergenic 30.0%
! AACATTATTTGGGATTCTTC+GGG + chr4_1:30141084-30141103 Msa0543620:CDS 30.0%
! GATTATGATTGGTTCACAAT+TGG + chr4_1:30141153-30141172 Msa0543620:CDS 30.0%
ACAATTGGATCAAGTAACAT+TGG + chr4_1:30141168-30141187 Msa0543620:CDS 30.0%
! GAAGTTTTTAAACAAGGATC+AGG - chr4_1:30141358-30141377 None:intergenic 30.0%
TAATCAAGTAGTTAACTGCA+TGG - chr4_1:30141522-30141541 None:intergenic 30.0%
!! ACAAAACTAATCGACTTGTA+AGG - chr4_1:30141622-30141641 None:intergenic 30.0%
!!! TACAAGTCGATTAGTTTTGT+AGG + chr4_1:30141622-30141641 Msa0543620:intron 30.0%
!!! ACAAGTCGATTAGTTTTGTA+GGG + chr4_1:30141623-30141642 Msa0543620:intron 30.0%
ACATCAAAACGGTTGTAATA+CGG + chr4_1:30141863-30141882 Msa0543620:intron 30.0%
!!! GGAATTTCGTGTTTTTTGAA+AGG - chr4_1:30142021-30142040 None:intergenic 30.0%
TCATTGTATGGAGTTGAAAT+GGG - chr4_1:30142118-30142137 None:intergenic 30.0%
ATCATTGTATGGAGTTGAAA+TGG - chr4_1:30142119-30142138 None:intergenic 30.0%
! ATACAACACAACTTGTTCAT+TGG - chr4_1:30142191-30142210 None:intergenic 30.0%
AGGTTGAATATCGAAATTTC+CGG - chr4_1:30142215-30142234 None:intergenic 30.0%
!! ATGACAAAATCAAAAGCATC+TGG + chr4_1:30142331-30142350 Msa0543620:CDS 30.0%
AATGGATACAACAAGGACAA+AGG - chr4_1:30138890-30138909 None:intergenic 35.0%
GAAAGACAAAACCAAGGAAA+AGG - chr4_1:30138970-30138989 None:intergenic 35.0%
AAGACAGAAAGACAAAACCA+AGG - chr4_1:30138976-30138995 None:intergenic 35.0%
TGAGAAAACAAAAATGGGGA+TGG - chr4_1:30139074-30139093 None:intergenic 35.0%
! TGTTTTCTCAACTGAACAGA+AGG + chr4_1:30139084-30139103 Msa0543620:five_prime_UTR 35.0%
AGGTTTCTGTAATCTTGAAG+TGG + chr4_1:30139151-30139170 Msa0543620:CDS 35.0%
!! AGAAACTTTCATGGTGGATA+AGG + chr4_1:30139187-30139206 Msa0543620:CDS 35.0%
AAAGTGTATGTCTGGTATCA+CGG + chr4_1:30139221-30139240 Msa0543620:intron 35.0%
CAAGTGTATGTCTGATATCA+TGG + chr4_1:30139289-30139308 Msa0543620:intron 35.0%
AAGGAAAATCATTGCAAGCA+TGG - chr4_1:30139786-30139805 None:intergenic 35.0%
! AACATTTTTGACAGGATCTG+AGG + chr4_1:30139963-30139982 Msa0543620:intron 35.0%
! ACATTTTTGACAGGATCTGA+GGG + chr4_1:30139964-30139983 Msa0543620:intron 35.0%
! ACGACCTCATTCAATGTTTT+TGG + chr4_1:30140099-30140118 Msa0543620:intron 35.0%
CATACACTAGAAAAGTAAGC+AGG - chr4_1:30140190-30140209 None:intergenic 35.0%
TACTCAATACTCGAGCAAAT+TGG + chr4_1:30140367-30140386 Msa0543620:CDS 35.0%
GTATTTGGAAAATCAAGTGG+TGG + chr4_1:30140395-30140414 Msa0543620:CDS 35.0%
!! CGAAAGTGTTTCTAACTTAC+TGG + chr4_1:30140580-30140599 Msa0543620:CDS 35.0%
! CAAACTGAAAAATCGGTTCA+AGG + chr4_1:30140605-30140624 Msa0543620:CDS 35.0%
!! AAGGGATTAGTTATTGGTCA+TGG + chr4_1:30140624-30140643 Msa0543620:CDS 35.0%
TACCAACATGATAACCATCT+GGG - chr4_1:30140900-30140919 None:intergenic 35.0%
TTACCAACATGATAACCATC+TGG - chr4_1:30140901-30140920 None:intergenic 35.0%
! GTCAATGCTTTCGAGTAAAT+TGG + chr4_1:30140922-30140941 Msa0543620:CDS 35.0%
GAAGTGCAAAATCGTTGAAA+TGG + chr4_1:30141015-30141034 Msa0543620:CDS 35.0%
TAGTTTATTCCATAGGGAGA+TGG - chr4_1:30141208-30141227 None:intergenic 35.0%
!!! GATTTTTGAAAGTGTTCCTG+CGG + chr4_1:30141254-30141273 Msa0543620:CDS 35.0%
!! TTGAGAGTCGACTTGAAATA+TGG + chr4_1:30141561-30141580 Msa0543620:intron 35.0%
!!! TCGTGTTTTTTGAAAGGTGT+AGG - chr4_1:30142015-30142034 None:intergenic 35.0%
!!! CTTGAACTGCTGATTTTGAT+GGG - chr4_1:30142042-30142061 None:intergenic 35.0%
CCACACAAAGAATCATTGTA+TGG - chr4_1:30142130-30142149 None:intergenic 35.0%
CCATACAATGATTCTTTGTG+TGG + chr4_1:30142127-30142146 Msa0543620:CDS 35.0%
TTCAAGTGGTTCTTCTCAAA+AGG + chr4_1:30142150-30142169 Msa0543620:CDS 35.0%
TCAAGTGGTTCTTCTCAAAA+GGG + chr4_1:30142151-30142170 Msa0543620:CDS 35.0%
! AAAGCATCTGGTCATAGTTA+TGG + chr4_1:30142343-30142362 Msa0543620:CDS 35.0%
GTGTTGGAATGGATACAACA+AGG - chr4_1:30138897-30138916 None:intergenic 40.0%
GGGTTATAGTTGTGTTGGAA+TGG - chr4_1:30138908-30138927 None:intergenic 40.0%
AAAACCAAGGAAAAGGGTTG+TGG - chr4_1:30138963-30138982 None:intergenic 40.0%
AACAAAAATGGGGATGGAAG+AGG - chr4_1:30139068-30139087 None:intergenic 40.0%
TGGAGAAGAAACTTTCATGG+TGG + chr4_1:30139181-30139200 Msa0543620:CDS 40.0%
AACCAGTATGACTTTGAGTC+TGG + chr4_1:30139333-30139352 Msa0543620:intron 40.0%
TTCCAGACTCAAAGTCATAC+TGG - chr4_1:30139338-30139357 None:intergenic 40.0%
!! TTTCACTTTCTAGCTACCCT+TGG + chr4_1:30139680-30139699 Msa0543620:intron 40.0%
CACCTAAATAGCAGTGAAGT+GGG + chr4_1:30139745-30139764 Msa0543620:intron 40.0%
ACCTAAATAGCAGTGAAGTG+GGG + chr4_1:30139746-30139765 Msa0543620:intron 40.0%
GTGGTTAGTGAAAGTAGTGA+AGG - chr4_1:30139805-30139824 None:intergenic 40.0%
CACATTTAATGCTGCTGCTA+TGG + chr4_1:30139892-30139911 Msa0543620:intron 40.0%
TAGAATGAGGGTGAGTATCA+AGG - chr4_1:30140063-30140082 None:intergenic 40.0%
!! CGGTTCAAGGGATTAGTTAT+TGG + chr4_1:30140618-30140637 Msa0543620:CDS 40.0%
!! TCTGATGCTAGAGAAGTGTT+TGG + chr4_1:30140703-30140722 Msa0543620:CDS 40.0%
AAGTGTTTGGATGCTGTAGT+TGG + chr4_1:30140716-30140735 Msa0543620:CDS 40.0%
AGTGTTTGGATGCTGTAGTT+GGG + chr4_1:30140717-30140736 Msa0543620:CDS 40.0%
AGTTGTTCGAATGACAGTTC+AGG + chr4_1:30140779-30140798 Msa0543620:CDS 40.0%
GTTGTTCGAATGACAGTTCA+GGG + chr4_1:30140780-30140799 Msa0543620:CDS 40.0%
CAAATTTCACTCGTTCGACT+TGG + chr4_1:30140846-30140865 Msa0543620:CDS 40.0%
ACCAACATGATAACCATCTG+GGG - chr4_1:30140899-30140918 None:intergenic 40.0%
AAAGAATCCCTAGCAGAATC+TGG - chr4_1:30141409-30141428 None:intergenic 40.0%
TGATGAACTCTACCATGCAA+TGG + chr4_1:30141429-30141448 Msa0543620:CDS 40.0%
!!! TAGTTTTGTAGGGTCGTGTT+AGG + chr4_1:30141633-30141652 Msa0543620:intron 40.0%
GGATGTACCTATAACAGAAG+AGG - chr4_1:30141920-30141939 None:intergenic 40.0%
GAACGGATAAAGATATGCTG+TGG + chr4_1:30141956-30141975 Msa0543620:intron 40.0%
!!! GCTTGAACTGCTGATTTTGA+TGG - chr4_1:30142043-30142062 None:intergenic 40.0%
GATTCTTTGTGTGGTTCAAG+TGG + chr4_1:30142136-30142155 Msa0543620:CDS 40.0%
GAACAAGTTGTGTTGTATGC+CGG + chr4_1:30142193-30142212 Msa0543620:CDS 40.0%
AACATTTGCAAGGAATGCAG+TGG + chr4_1:30142254-30142273 Msa0543620:CDS 40.0%
CGGTTGGGTTATAGTTGTGT+TGG - chr4_1:30138913-30138932 None:intergenic 45.0%
GGAAAAGGGTTGTGGTCAAT+TGG - chr4_1:30138955-30138974 None:intergenic 45.0%
! TTGACCACAACCCTTTTCCT+TGG + chr4_1:30138956-30138975 Msa0543620:five_prime_UTR 45.0%
AATGGGGATGGAAGAGGAAA+AGG - chr4_1:30139062-30139081 None:intergenic 45.0%
CGGTAGATTCGTCGAAATCA+TGG + chr4_1:30139241-30139260 Msa0543620:intron 45.0%
GCACCTAAATAGCAGTGAAG+TGG + chr4_1:30139744-30139763 Msa0543620:intron 45.0%
! GGAAAATCAAGTGGTGGAAG+TGG + chr4_1:30140401-30140420 Msa0543620:CDS 45.0%
CTGTCATTCGAACAACTCGA+GGG - chr4_1:30140776-30140795 None:intergenic 45.0%
ACTGTCATTCGAACAACTCG+AGG - chr4_1:30140777-30140796 None:intergenic 45.0%
CGAATGACAGTTCAGGGATT+AGG + chr4_1:30140786-30140805 Msa0543620:CDS 45.0%
!! ATTTCACTCGTTCGACTTGG+TGG + chr4_1:30140849-30140868 Msa0543620:CDS 45.0%
!!! CTTGTTTTTGACTCCCCAGA+TGG + chr4_1:30140883-30140902 Msa0543620:CDS 45.0%
TCCCCAGATGGTTATCATGT+TGG + chr4_1:30140895-30140914 Msa0543620:CDS 45.0%
CTTCTCATCTGTAGTAGCAG+TGG - chr4_1:30140999-30141018 None:intergenic 45.0%
TTGCTTGTTCCATCTCCCTA+TGG + chr4_1:30141196-30141215 Msa0543620:CDS 45.0%
AGCAACTTTCCGCATCTGAA+CGG - chr4_1:30141302-30141321 None:intergenic 45.0%
AGCTCTTCCAGATTCTGCTA+GGG + chr4_1:30141399-30141418 Msa0543620:CDS 45.0%
CGAGATACATGTCCATTGCA+TGG - chr4_1:30141444-30141463 None:intergenic 45.0%
TGCAATGGACATGTATCTCG+AGG + chr4_1:30141444-30141463 Msa0543620:CDS 45.0%
GTAAAACATCGTCACGCTGT+TGG - chr4_1:30141785-30141804 None:intergenic 45.0%
CTCAACTCTCACAAGACGAA+CGG + chr4_1:30141939-30141958 Msa0543620:intron 45.0%
ATTTGCAAGGAATGCAGTGG+AGG + chr4_1:30142257-30142276 Msa0543620:CDS 45.0%
TTTGCAAGGAATGCAGTGGA+GGG + chr4_1:30142258-30142277 Msa0543620:CDS 45.0%
GAGACAGAAGTAGTGCGGTT+GGG - chr4_1:30138928-30138947 None:intergenic 50.0%
AGAGACAGAAGTAGTGCGGT+TGG - chr4_1:30138929-30138948 None:intergenic 50.0%
GTGCAGAGACAGAAGTAGTG+CGG - chr4_1:30138933-30138952 None:intergenic 50.0%
! GCCCCACTTCACTGCTATTT+AGG - chr4_1:30139750-30139769 None:intergenic 50.0%
! GCGTTGTGCTGCTGAATACA+TGG + chr4_1:30140541-30140560 Msa0543620:CDS 50.0%
GTTTGGATGCTGTAGTTGGG+AGG + chr4_1:30140720-30140739 Msa0543620:CDS 50.0%
!! TGTAGTTGGGAGGCTGGTTT+CGG + chr4_1:30140730-30140749 Msa0543620:CDS 50.0%
TTCGAACAACTCGAGGGACA+CGG - chr4_1:30140770-30140789 None:intergenic 50.0%
!! TTGAAAGTGTTCCTGCGGCA+AGG + chr4_1:30141259-30141278 Msa0543620:CDS 50.0%
GCAACTTTCCGCATCTGAAC+GGG - chr4_1:30141301-30141320 None:intergenic 50.0%
CAGCTCTTCCAGATTCTGCT+AGG + chr4_1:30141398-30141417 Msa0543620:CDS 50.0%
CGTTCGTCTTGTGAGAGTTG+AGG - chr4_1:30141941-30141960 None:intergenic 50.0%
! GAAAGGTGTAGGCATGCTTG+TGG - chr4_1:30142004-30142023 None:intergenic 50.0%
AGGAATGCAGTGGAGGGTTA+TGG + chr4_1:30142264-30142283 Msa0543620:CDS 50.0%
!! GATTTTCCAGGAGGCGCAGA+AGG + chr4_1:30140446-30140465 Msa0543620:CDS 55.0%
TCAAAACCTTCTGCGCCTCC+TGG - chr4_1:30140455-30140474 None:intergenic 55.0%
CGCGCGAGTAACAGATTCGA+AGG - chr4_1:30140524-30140543 None:intergenic 55.0%
GGATGCTGTAGTTGGGAGGC+TGG + chr4_1:30140724-30140743 Msa0543620:CDS 60.0%
GTGTTCCTGCGGCAAGGAAC+TGG + chr4_1:30141265-30141284 Msa0543620:CDS 60.0%
CGGTTGCTCCCGTTCAGATG+CGG + chr4_1:30141290-30141309 Msa0543620:CDS 60.0%
CCTGCGGCAAGGAACTGGTG+CGG + chr4_1:30141270-30141289 Msa0543620:CDS 65.0%
CCGCACCAGTTCCTTGCCGC+AGG - chr4_1:30141273-30141292 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 30138825 30142393 30138825 ID=Msa0543620;Name=Msa0543620
chr4_1 mRNA 30138825 30142393 30138825 ID=Msa0543620-mRNA-1;Parent=Msa0543620;Name=Msa0543620-mRNA-1;_AED=0.19;_eAED=0.19;_QI=318|0.5|0.66|1|1|1|3|0|524
chr4_1 exon 30138825 30139208 30138825 ID=Msa0543620-mRNA-1:exon:7975;Parent=Msa0543620-mRNA-1
chr4_1 exon 30140359 30141465 30140359 ID=Msa0543620-mRNA-1:exon:7976;Parent=Msa0543620-mRNA-1
chr4_1 exon 30141992 30142393 30141992 ID=Msa0543620-mRNA-1:exon:7977;Parent=Msa0543620-mRNA-1
chr4_1 five_prime_UTR 30138825 30139142 30138825 ID=Msa0543620-mRNA-1:five_prime_utr;Parent=Msa0543620-mRNA-1
chr4_1 CDS 30139143 30139208 30139143 ID=Msa0543620-mRNA-1:cds;Parent=Msa0543620-mRNA-1
chr4_1 CDS 30140359 30141465 30140359 ID=Msa0543620-mRNA-1:cds;Parent=Msa0543620-mRNA-1
chr4_1 CDS 30141992 30142393 30141992 ID=Msa0543620-mRNA-1:cds;Parent=Msa0543620-mRNA-1
Gene Sequence

>Msa0543620

ATGGAAGAAGGTTTCTGTAATCTTGAAGTGGATGTAAATGGAGAAGAAACTTTCATGGTGGATAAGACGATTATTACTCAATACTCGAGCAAATTGGCTAAAGTATTTGGAAAATCAAGTGGTGGAAGTGGAAAGCTTAAAGTAATATTTCATGATTTTCCAGGAGGCGCAGAAGGTTTTGAGCTTATGTTAAGATTCTGTTATAACAATGGAAAAGGTAATTTAAGTCCTTCGAATCTGTTACTCGCGCGTTGTGCTGCTGAATACATGGAAATGAATGAATCTGTCGAAAGTGTTTCTAACTTACTGGATCAAACTGAAAAATCGGTTCAAGGGATTAGTTATTGGTCATGGTCAGAAATTTTGATTGCTTTGAAGCAATGTCAGAATTTGCTAGTTGATGATTCTTCTCTGATGCTAGAGAAGTGTTTGGATGCTGTAGTTGGGAGGCTGGTTTCGGCGAGTGAAGCAAGTCCGTGTCCCTCGAGTTGTTCGAATGACAGTTCAGGGATTAGGTTTTCGTGTGACTCGAAAAGTACTGAGAGTATAAAGACAAATTTCACTCGTTCGACTTGGTGGTTTGAAGATCTCTTGTTTTTGACTCCCCAGATGGTTATCATGTTGGTAAAGTCAATGCTTTCGAGTAAATTGGATCATTATGTTATAAGTAGGTTTCTTCTGTATTATCAGAAGGCGAAATTCGCCACTGCTACTACAGATGAGAAGTGCAAAATCGTTGAAATGGTCATAGATATGCATTACGAAATAGACCGGAGTTCTGTTTCTTTCAAAACATTATTTGGGATTCTTCGGGTGACTTTGTGTTTGAACATAAGTAAATGTAGTAGGAATAAGTTGGAGATTATGATTGGTTCACAATTGGATCAAGTAACATTGGACAATTTGCTTGTTCCATCTCCCTATGGAATAAACTACTTATATGATGTGAACCTTGTTTTGAGATTTTTGAAAGTGTTCCTGCGGCAAGGAACTGGTGCGGTTGCTCCCGTTCAGATGCGGAAAGTTGCTAGCTTAATAGATTTGTATATAGCTGAAATTGCACCTGATCCTTGTTTAAAAACTTCAAAGTTTTTGGCTCTTGCTACAGCTCTTCCAGATTCTGCTAGGGATTCTTTTGATGAACTCTACCATGCAATGGACATGTATCTCGAGAAACTTTCACCACAAGCATGCCTACACCTTTCAAAAAACACGAAATTCCCATCAAAATCAGCAGTTCAAGCTCTCATATCTCAACAATCTAAGCTAAAAAATTTACTTCTCACTACTACTACTCCCATTTCAACTCCATACAATGATTCTTTGTGTGGTTCAAGTGGTTCTTCTCAAAAGGGAAAGAAAGAAAGAACCAATGAACAAGTTGTGTTGTATGCCGGAAATTTCGATATTCAACCTGATAATGAGAAAATGAAAGAACATTTGCAAGGAATGCAGTGGAGGGTTATGGAATTAGAGAAAGTATGTAAGAAAATGCAAACTCAGATTGTTAAGATGACAAAATCAAAAGCATCTGGTCATAGTTATGGTAAATCTTTGCCAAAGCTATGTTCATGA
Protein sequence

>Msa0543620

MEEGFCNLEVDVNGEETFMVDKTIITQYSSKLAKVFGKSSGGSGKLKVIFHDFPGGAEGFELMLRFCYNNGKGNLSPSNLLLARCAAEYMEMNESVESVSNLLDQTEKSVQGISYWSWSEILIALKQCQNLLVDDSSLMLEKCLDAVVGRLVSASEASPCPSSCSNDSSGIRFSCDSKSTESIKTNFTRSTWWFEDLLFLTPQMVIMLVKSMLSSKLDHYVISRFLLYYQKAKFATATTDEKCKIVEMVIDMHYEIDRSSVSFKTLFGILRVTLCLNISKCSRNKLEIMIGSQLDQVTLDNLLVPSPYGINYLYDVNLVLRFLKVFLRQGTGAVAPVQMRKVASLIDLYIAEIAPDPCLKTSKFLALATALPDSARDSFDELYHAMDMYLEKLSPQACLHLSKNTKFPSKSAVQALISQQSKLKNLLLTTTTPISTPYNDSLCGSSGSSQKGKKERTNEQVVLYAGNFDIQPDNEKMKEHLQGMQWRVMELEKVCKKMQTQIVKMTKSKASGHSYGKSLPKLCS*