AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024580 MtrunA17_Chr7g0242351 97.802 455 10 0 1 455 1 455 0.0 900
Msa1024580 MtrunA17_Chr5g0429881 70.823 401 110 4 37 434 29 425 0.0 516
Msa1024580 MtrunA17_Chr4g0006841 79.511 327 66 1 130 455 2 328 5.64e-169 478
Msa1024580 MtrunA17_Chr2g0334171 48.958 384 178 5 62 435 63 438 4.96e-118 352
Msa1024580 MtrunA17_Chr3g0120501 45.139 432 208 7 14 434 16 429 1.01e-110 333
Msa1024580 MtrunA17_Chr4g0006831 67.544 114 34 2 8 120 9 120 1.40e-38 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024580 AT3G51860.1 70.721 444 113 6 10 441 6 444 0.0 576
Msa1024580 AT2G38170.1 67.735 437 136 3 10 441 7 443 0.0 575
Msa1024580 AT2G38170.3 68.445 431 131 3 10 435 7 437 0.0 572
Msa1024580 AT3G51860.2 71.324 408 101 5 10 405 6 409 0.0 522
Msa1024580 AT5G01490.2 58.636 440 173 3 13 445 14 451 6.13e-174 496
Msa1024580 AT5G01490.1 58.636 440 173 3 13 445 14 451 6.13e-174 496
Msa1024580 AT2G38170.2 67.733 344 106 3 10 348 7 350 1.53e-152 439
Msa1024580 AT1G55730.1 46.897 435 223 3 11 438 7 440 8.12e-127 375
Msa1024580 AT1G55730.2 46.897 435 223 3 11 438 7 440 8.12e-127 375
Msa1024580 AT3G13320.1 51.330 376 179 2 64 436 64 438 1.49e-125 372
Msa1024580 AT1G55720.2 46.973 413 209 3 25 436 44 447 7.46e-121 360
Msa1024580 AT1G55720.1 46.973 413 209 3 25 436 44 447 1.29e-120 360

Find 186 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTTGCTACTTTGTTAT+TGG 0.090694 7_1:+54032549 Msa1024580:CDS
TTCAGTTGAAATATGATTTA+TGG 0.099819 7_1:-54033318 None:intergenic
ATGCTACCATCCTTCATTTA+TGG 0.126747 7_1:-54032913 None:intergenic
CATTGCATTCTGCAATTAAT+TGG 0.172443 7_1:-54035928 None:intergenic
TATCTATTATTTAATTTATT+GGG 0.172848 7_1:+54035098 Msa1024580:three_prime_UTR
CAGAGGAAACTTATTTAAAA+TGG 0.184683 7_1:+54033254 Msa1024580:three_prime_UTR
ATATCTATTATTTAATTTAT+TGG 0.186522 7_1:+54035097 Msa1024580:three_prime_UTR
TGTTGTCAAGTATTCTCTTT+TGG 0.190793 7_1:+54030475 Msa1024580:CDS
AAGAGGCTGTGATTGGATTT+TGG 0.204843 7_1:+54031332 Msa1024580:CDS
ACTCTACTTGTTTAGATAAT+AGG 0.216940 7_1:+54034848 Msa1024580:three_prime_UTR
TGCATTGGATATCAAATAAA+TGG 0.228234 7_1:+54033136 Msa1024580:three_prime_UTR
AGATTCAATACATTGGTTAT+TGG 0.231443 7_1:+54032954 Msa1024580:three_prime_UTR
AGGGTGTTTGTTTGGATATT+AGG 0.252979 7_1:-54035633 None:intergenic
CTTACTTGATCTTTCAACTA+TGG 0.265436 7_1:+54031145 Msa1024580:CDS
ATTAAAATCGTATATAAAAT+AGG 0.268548 7_1:+54035538 Msa1024580:three_prime_UTR
AGTAGCAAAGTAGGAGAATA+AGG 0.270564 7_1:-54032539 None:intergenic
TGGAATTGTTCTCATGAGTT+TGG 0.279459 7_1:+54033156 Msa1024580:three_prime_UTR
CGAAGGATTGATTTATCTTT+CGG 0.283083 7_1:-54035566 None:intergenic
TTTATGGAAGGAATCAAAAT+AGG 0.286362 7_1:-54032897 None:intergenic
CTTACCCTCATCTATTATAA+TGG 0.292401 7_1:+54036126 Msa1024580:three_prime_UTR
TGCAGAATGCAATGCTTTAT+CGG 0.293855 7_1:+54035937 Msa1024580:three_prime_UTR
CTAGAATTCGCTTAAATTGT+AGG 0.294282 7_1:-54035139 None:intergenic
AGTTCCTCTAATATAACATT+TGG 0.295231 7_1:-54034972 None:intergenic
AATACTTGACAACAGCAATT+TGG 0.296161 7_1:-54030466 None:intergenic
ATGTCCATGTCTTGCTTCCT+TGG 0.298757 7_1:-54029313 None:intergenic
TGTGATTGTTGCTTGGATAA+TGG 0.299937 7_1:+54032291 Msa1024580:CDS
AGAAGAACAACCATGGCTTT+TGG 0.313403 7_1:+54029266 Msa1024580:CDS
TCATCGTCGTCTTCGCCGTT+AGG 0.322680 7_1:-54035812 None:intergenic
GCTTCCTTGGTCAAGACCTT+TGG 0.324710 7_1:-54029300 None:intergenic
GTGATTGTTGCTTGGATAAT+GGG 0.331063 7_1:+54032292 Msa1024580:CDS
TGAGACAGGTTCTCTTGCTT+TGG 0.332421 7_1:+54032345 Msa1024580:CDS
GTGATGTTATTAACACCATT+TGG 0.333001 7_1:-54032733 None:intergenic
CTCTCTGTGTGATTGTTGCT+TGG 0.344128 7_1:+54032284 Msa1024580:CDS
ATTGAATCTGCATTTGAGTT+TGG 0.344977 7_1:-54032940 None:intergenic
AACATCCAAGAGGTTATTCT+TGG 0.346417 7_1:+54029444 Msa1024580:CDS
TTATTGCAAGCTTTGTGAAT+AGG 0.347197 7_1:+54033035 Msa1024580:three_prime_UTR
AGTCACAGGCTTCACTTTGC+AGG 0.348389 7_1:+54032375 Msa1024580:CDS
GTTAAGTTCGACATCGTGAT+AGG 0.352584 7_1:+54033379 Msa1024580:three_prime_UTR
GTACAACTAACCTAAACTTT+AGG 0.357721 7_1:-54035066 None:intergenic
AGGTTCGATGTGCTTCGCTT+AGG 0.358508 7_1:+54029409 Msa1024580:CDS
TACTCAAATTTCAATGTTTG+CGG 0.360322 7_1:+54031982 Msa1024580:CDS
GGAATTGTTCTCATGAGTTT+GGG 0.364979 7_1:+54033157 Msa1024580:three_prime_UTR
TCAAACCTTCTTCTTGTGCT+TGG 0.370945 7_1:+54030509 Msa1024580:CDS
TTGGATAATGGGTGTGAAAA+TGG 0.371356 7_1:+54032303 Msa1024580:CDS
TGATGGAAAGGGTGTTTGTT+TGG 0.371401 7_1:-54035641 None:intergenic
TAATAGGATGGTCGTGCTTA+AGG 0.371648 7_1:+54034864 Msa1024580:three_prime_UTR
CCATCTCTCTTTCGTTTACA+AGG 0.376995 7_1:+54036100 Msa1024580:three_prime_UTR
ACAAAGATATGCCACGAATA+AGG 0.378296 7_1:-54035195 None:intergenic
TGATGTTATTAACACCATTT+GGG 0.378729 7_1:-54032732 None:intergenic
TAGGATTTAAAAGAATCATT+TGG 0.380999 7_1:-54035047 None:intergenic
GGTTCGATGTGCTTCGCTTA+GGG 0.383144 7_1:+54029410 Msa1024580:CDS
AAACCCAAATGTTATATTAG+AGG 0.383993 7_1:+54034968 Msa1024580:three_prime_UTR
TGCTTCTCCTGTGAGAGTTT+CGG 0.386725 7_1:+54035594 Msa1024580:three_prime_UTR
AGTAGCTTTGGTTGGTTGGC+TGG 0.395588 7_1:+54031355 Msa1024580:CDS
AAAAGCAATCGTAAATAAAC+AGG 0.396730 7_1:+54035483 Msa1024580:three_prime_UTR
CATCGTCGTCTTCGCCGTTA+GGG 0.396802 7_1:-54035811 None:intergenic
ATATGTGGTTGATACAATTC+AGG 0.397274 7_1:+54031408 Msa1024580:CDS
ATAACATAGACTTACCTATT+AGG 0.398912 7_1:-54032788 None:intergenic
TCAGCTGCATTGCCAACTAT+TGG 0.400365 7_1:-54031739 None:intergenic
GTTCCTCTAATATAACATTT+GGG 0.407648 7_1:-54034971 None:intergenic
GCCTTCTTCACTGGTCCTAC+AGG 0.422012 7_1:+54030267 Msa1024580:CDS
TTGGAGTAGCTTTGGTTGGT+TGG 0.422886 7_1:+54031351 Msa1024580:CDS
AACAGGATGCATCAGATTCA+TGG 0.429074 7_1:+54031680 Msa1024580:intron
GCCATTGTTGCTCACTACCT+TGG 0.429316 7_1:+54029504 Msa1024580:CDS
AAAAGATTAAGCAATTCAAA+AGG 0.433154 7_1:-54033201 None:intergenic
CATTTCCTTAGGTGTTGCAT+TGG 0.434861 7_1:+54031952 Msa1024580:CDS
TTGATCGAGATCGGCAATGA+AGG 0.439181 7_1:-54035747 None:intergenic
ATTTCCTTAGGTGTTGCATT+GGG 0.439331 7_1:+54031953 Msa1024580:CDS
TTGATTCCTTCCATAAATGA+AGG 0.442321 7_1:+54032903 Msa1024580:three_prime_UTR
TGACTGCAGGACATTTCCTT+AGG 0.447939 7_1:+54031941 Msa1024580:intron
GCAGAAGAAGAGGCTGTGAT+TGG 0.449081 7_1:+54031325 Msa1024580:CDS
GACATGGTTGTCTGAAGAAC+TGG 0.449189 7_1:-54035897 None:intergenic
GAATTCACTAATGCTGCTAT+TGG 0.449882 7_1:+54030999 Msa1024580:CDS
AGATATCAGTATATCGCTGC+TGG 0.453155 7_1:-54035856 None:intergenic
ATCTATTATTTAATTTATTG+GGG 0.453576 7_1:+54035099 Msa1024580:three_prime_UTR
TGTATTATCGACTCGAGCTC+TGG 0.455745 7_1:-54036025 None:intergenic
GTTGCTCACTACCTTGGCTT+AGG 0.459775 7_1:+54029510 Msa1024580:CDS
TGCTTTGTTATCTGAATATG+TGG 0.461322 7_1:+54031393 Msa1024580:CDS
AGACAAATTGCCTTCTTCAC+TGG 0.464133 7_1:+54030258 Msa1024580:intron
TAGAATTCGCTTAAATTGTA+GGG 0.466847 7_1:-54035138 None:intergenic
AACTTCAACCTCCTTGAGAC+AGG 0.467800 7_1:+54032331 Msa1024580:CDS
CTTGGAACCTCTCTACTTTG+TGG 0.472185 7_1:+54030527 Msa1024580:CDS
TACTGATATCTTACAGAAAG+TGG 0.474592 7_1:+54035868 Msa1024580:three_prime_UTR
CCCTTCAATCATATACCAAT+AGG 0.475019 7_1:-54033093 None:intergenic
ACAATGGCAGCAGGAATGGC+AGG 0.475255 7_1:-54029489 None:intergenic
GACATGGACATGGCCGGAGC+CGG 0.476259 7_1:+54029325 Msa1024580:CDS
TGCTTCGCTTAGGGTCGTGT+TGG 0.482780 7_1:+54029419 Msa1024580:CDS
ATGAAGGTGAGGATGACATC+TGG 0.489059 7_1:-54034822 None:intergenic
AAGAAGAAGGTTTGAAAGGA+TGG 0.493952 7_1:-54030501 None:intergenic
AGGTTCCAAGCACAAGAAGA+AGG 0.498266 7_1:-54030514 None:intergenic
AGCAACAATGGCAGCAGGAA+TGG 0.498904 7_1:-54029493 None:intergenic
TCCTATTGGTATATGATTGA+AGG 0.499007 7_1:+54033092 Msa1024580:three_prime_UTR
ATCTGCTAGCATTGTGATGT+TGG 0.501905 7_1:+54031110 Msa1024580:CDS
ACAGGATGCATCAGATTCAT+GGG 0.502893 7_1:+54031681 Msa1024580:intron
CAGTATATCGCTGCTGGGAT+CGG 0.504595 7_1:-54035850 None:intergenic
TGAATAGCAATGGAAGCAAA+TGG 0.504609 7_1:-54031032 None:intergenic
CTTACATCTTCAACTACGTC+GGG 0.506959 7_1:+54036157 Msa1024580:three_prime_UTR
GCTTTGGCAATTATAGTCAC+AGG 0.509232 7_1:+54032361 Msa1024580:CDS
AGTACTTGTCTCACTTGCTA+TGG 0.511694 7_1:-54029171 None:intergenic
CAATAACAAAGTAGCAAAGT+AGG 0.513940 7_1:-54032548 None:intergenic
AAGACATGTTATGCGCGGTC+CGG 0.516110 7_1:-54029344 None:intergenic
ATAATCTTGCTACCAATAGT+TGG 0.517828 7_1:+54031727 Msa1024580:CDS
TGATCATACTCTTGTGTCCA+AGG 0.518591 7_1:+54029389 Msa1024580:CDS
ACCTGTAGGACCAGTGAAGA+AGG 0.522080 7_1:-54030268 None:intergenic
TGTGGTGGCATTGCTAACCT+TGG 0.523361 7_1:+54030545 Msa1024580:CDS
TGGAGGGTGTATAATAATAG+AGG 0.524685 7_1:-54035246 None:intergenic
CCTATTGGTATATGATTGAA+GGG 0.526643 7_1:+54033093 Msa1024580:three_prime_UTR
GGCAATGCAGCTGAACATGC+AGG 0.532772 7_1:+54031748 Msa1024580:CDS
ACGACACGAGCATAATCAAT+GGG 0.535487 7_1:-54036052 None:intergenic
AACGACACGAGCATAATCAA+TGG 0.536313 7_1:-54036053 None:intergenic
TAAATAATAGATATAAACTA+AGG 0.540725 7_1:-54035088 None:intergenic
TTCGTTCTACACTGCATGCA+TGG 0.541761 7_1:+54035709 Msa1024580:intron
GCTCGTGTCGTTAAGAACAT+AGG 0.542801 7_1:+54036064 Msa1024580:three_prime_UTR
TGGTACCAAGAATAACCTCT+TGG 0.544158 7_1:-54029449 None:intergenic
GAACAATGAGGCAGAAGAAG+AGG 0.545340 7_1:+54031315 Msa1024580:CDS
AAAGATTAAGCAATTCAAAA+GGG 0.547371 7_1:-54033200 None:intergenic
TTTCTGATCGTGCATTGCAT+TGG 0.547897 7_1:+54033121 Msa1024580:three_prime_UTR
GGTGTATAATAATAGAGGAT+CGG 0.551231 7_1:-54035241 None:intergenic
TAGTGAGCAACAATGGCAGC+AGG 0.554698 7_1:-54029498 None:intergenic
AAGCAAGACATGGACATGGC+CGG 0.556755 7_1:+54029319 Msa1024580:CDS
TTAAGTTCGACATCGTGATA+GGG 0.561521 7_1:+54033380 Msa1024580:three_prime_UTR
ATGATCAGATTTCTTGCGCA+AGG 0.565719 7_1:-54029373 None:intergenic
CTGCTGGGATCGGTGCAACA+TGG 0.566568 7_1:-54035840 None:intergenic
TTTCGCTTTCAAGAACAAGC+TGG 0.567168 7_1:+54031780 Msa1024580:CDS
GCACAAGAAGAAGGTTTGAA+AGG 0.568007 7_1:-54030505 None:intergenic
GGTACTTCTCACTACTTGAA+AGG 0.569583 7_1:+54032516 Msa1024580:CDS
AACTTACTCTTCCTAAGCCA+AGG 0.571467 7_1:-54029521 None:intergenic
GGAACCTCTCTACTTTGTGG+TGG 0.572641 7_1:+54030530 Msa1024580:CDS
AGGAATGGCAGGGAAGAGAA+TGG 0.574003 7_1:-54029478 None:intergenic
AGAACCCAATGCAACACCTA+AGG 0.575365 7_1:-54031957 None:intergenic
TACCATCCTTCATTTATGGA+AGG 0.576158 7_1:-54032909 None:intergenic
GACATCGAGTTGATCGAGAT+CGG 0.576244 7_1:-54035756 None:intergenic
GAAGGTTCTACTGTGAGTGC+AGG 0.577295 7_1:-54031072 None:intergenic
CATCTCTCTTTCGTTTACAA+GGG 0.580023 7_1:+54036101 Msa1024580:three_prime_UTR
AAGCTCACACGTTCAGCAAG+TGG 0.581166 7_1:-54030086 None:intergenic
AAGCAAGAGAACCTGTCTCA+AGG 0.585227 7_1:-54032342 None:intergenic
AAGCGAAGCACATCGAACCT+TGG 0.585577 7_1:-54029406 None:intergenic
GCCAAGGTAGTGAGCAACAA+TGG 0.587406 7_1:-54029505 None:intergenic
CACAACCATTATAATAGATG+AGG 0.589227 7_1:-54036131 None:intergenic
AGGGAAGAGAATGGACAGCT+TGG 0.590813 7_1:-54029469 None:intergenic
TTTGTCACATCCAGATAGGA+GGG 0.591538 7_1:+54032982 Msa1024580:three_prime_UTR
TTGTTGAAATATGTTATCAG+AGG 0.592267 7_1:-54035438 None:intergenic
TTCCTTCCATAAATGAAGGA+TGG 0.592693 7_1:+54032907 Msa1024580:three_prime_UTR
CAAATGCAGATTCAATACAT+TGG 0.596880 7_1:+54032947 Msa1024580:three_prime_UTR
TTACCATTCTCCAAAAGCCA+TGG 0.602438 7_1:-54029276 None:intergenic
ACTTACATCTTCAACTACGT+CGG 0.603268 7_1:+54036156 Msa1024580:three_prime_UTR
GAAGGAATCAAAATAGGCCA+AGG 0.603408 7_1:-54032891 None:intergenic
GGACTTCTTAATGCAACATG+TGG 0.603864 7_1:+54030398 Msa1024580:CDS
GATATCAGTATATCGCTGCT+GGG 0.607661 7_1:-54035855 None:intergenic
ATCGGAAGTTGCGAATCGAT+CGG 0.608379 7_1:-54035223 None:intergenic
GATCTTGACAAGTAGAGTGA+AGG 0.608527 7_1:-54031090 None:intergenic
TTTGGAGAATGGTAATCCAA+AGG 0.613189 7_1:+54029284 Msa1024580:CDS
AAACAAGTAGAGTTTCATGA+AGG 0.614241 7_1:-54034838 None:intergenic
TCTATTATTTAATTTATTGG+GGG 0.617480 7_1:+54035100 Msa1024580:three_prime_UTR
ATAATAACCGAAACTCTCAC+AGG 0.620451 7_1:-54035601 None:intergenic
CCTTGTAAACGAAAGAGAGA+TGG 0.620560 7_1:-54036100 None:intergenic
TTGACCAAGGAAGCAAGACA+TGG 0.622225 7_1:+54029309 Msa1024580:CDS
TGGCATTGCTAACCTTGGAG+TGG 0.622942 7_1:+54030550 Msa1024580:CDS
ACAGGAGAAGCAACAATCGA+AGG 0.624628 7_1:-54035583 None:intergenic
AGTAGAGTTTCATGAAGGTG+AGG 0.628877 7_1:-54034833 None:intergenic
AAGCTCAGTATGAAAACCCA+TGG 0.629810 7_1:-54030050 None:intergenic
TTAATTGGTACTCTGAGACA+TGG 0.630133 7_1:-54035913 None:intergenic
GCACTGAATGTGAATAGCAA+TGG 0.630803 7_1:-54031042 None:intergenic
GACTTCTTAATGCAACATGT+GGG 0.630828 7_1:+54030399 Msa1024580:CDS
GATGGTGGCATAAACCCTAA+CGG 0.637390 7_1:+54035797 Msa1024580:three_prime_UTR
ACAACCATTATAATAGATGA+GGG 0.638192 7_1:-54036130 None:intergenic
ATTGTTGAACAGGAAGGTGA+AGG 0.640185 7_1:+54031289 Msa1024580:intron
CAGGATGCATCAGATTCATG+GGG 0.640272 7_1:+54031682 Msa1024580:intron
CAATGGCAGCAGGAATGGCA+GGG 0.643983 7_1:-54029488 None:intergenic
TACTTGTTTAGATAATAGGA+TGG 0.644732 7_1:+54034852 Msa1024580:three_prime_UTR
TTTGTGCAAAGAACACCCAA+TGG 0.650624 7_1:+54032582 Msa1024580:CDS
TCTTTCAACTATGGACACAC+AGG 0.659181 7_1:+54031154 Msa1024580:CDS
AAGTTGCGAATCGATCGGAA+TGG 0.671495 7_1:-54035218 None:intergenic
TGCCACCATCAAAATCAGCA+TGG 0.672804 7_1:-54035784 None:intergenic
TGATATCTTACAGAAAGTGG+AGG 0.674235 7_1:+54035871 Msa1024580:three_prime_UTR
CGTGTTGGTTAACATCCAAG+AGG 0.687464 7_1:+54029434 Msa1024580:CDS
AAATTCAAGAAGAACAACCA+TGG 0.691332 7_1:+54029259 Msa1024580:CDS
TAATCCAAAGGTCTTGACCA+AGG 0.693880 7_1:+54029296 Msa1024580:CDS
TTGGTAGCAAGATTATGCTG+AGG 0.695132 7_1:-54031720 None:intergenic
AATGCCACCACAAAGTAGAG+AGG 0.697147 7_1:-54030534 None:intergenic
CTGAGAAGACATGTTATGCG+CGG 0.699994 7_1:-54029349 None:intergenic
AGGTGAAGGTGAGAACAATG+AGG 0.701302 7_1:+54031303 Msa1024580:CDS
CAAGAGAACCTGTCTCAAGG+AGG 0.707842 7_1:-54032339 None:intergenic
AAGGAAGCAAGACATGGACA+TGG 0.708462 7_1:+54029315 Msa1024580:CDS
CAAGCAACAATCACACAGAG+AGG 0.724811 7_1:-54032283 None:intergenic
CTATTGGTATATGATTGAAG+GGG 0.727665 7_1:+54033094 Msa1024580:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAAAAAATATATAA+GGG - chr7_1:54035170-54035189 None:intergenic 0.0%
!!! AATTTTTAAAAAAATATATA+AGG - chr7_1:54035171-54035190 None:intergenic 0.0%
!! ATTAATTAGTAAAAATTAGT+TGG - chr7_1:54029793-54029812 None:intergenic 10.0%
!! AATGATTCAAATATAAATAA+GGG - chr7_1:54030147-54030166 None:intergenic 10.0%
!!! TTATTTTTAATATTTGATTC+TGG + chr7_1:54030193-54030212 Msa1024580:intron 10.0%
!! TCAAAATTAAACATTAATTA+AGG - chr7_1:54030313-54030332 None:intergenic 10.0%
!! TTAAAAAAATATTGATATTG+TGG + chr7_1:54030841-54030860 Msa1024580:intron 10.0%
!! ACTAATAAATTTCAATATAT+AGG + chr7_1:54032258-54032277 Msa1024580:intron 10.0%
!! ATAATTTAGATGAATAAAAA+CGG - chr7_1:54033724-54033743 None:intergenic 10.0%
!! AATTTATTAAATCTTATGAA+TGG + chr7_1:54033760-54033779 Msa1024580:intron 10.0%
!!! TTATTAATTTAAAACATTGT+GGG + chr7_1:54034067-54034086 Msa1024580:intron 10.0%
!!! AAAATATGGTTTTTATTTAT+AGG + chr7_1:54034250-54034269 Msa1024580:intron 10.0%
!!! AAATATGGTTTTTATTTATA+GGG + chr7_1:54034251-54034270 Msa1024580:intron 10.0%
!! AATAGAATTAATTAAACAAA+TGG - chr7_1:54034306-54034325 None:intergenic 10.0%
!! CTTATAATTAATAAAAAATG+GGG - chr7_1:54034410-54034429 None:intergenic 10.0%
!! TTTATAATTTAAAAGATCAA+CGG - chr7_1:54034659-54034678 None:intergenic 10.0%
!!! TCTTTTAAATTATAAATCAA+AGG + chr7_1:54034663-54034682 Msa1024580:intron 10.0%
!! TAAATAATAGATATAAACTA+AGG - chr7_1:54035091-54035110 None:intergenic 10.0%
!!! ATCTATTATTTAATTTATTG+GGG + chr7_1:54035099-54035118 Msa1024580:three_prime_UTR 10.0%
!!! TTTTTTTTTTAATGAAATGT+GGG - chr7_1:54035509-54035528 None:intergenic 10.0%
!!! TTTTTTTTTTTAATGAAATG+TGG - chr7_1:54035510-54035529 None:intergenic 10.0%
!!! ATTTTATATACGATTTTAAT+GGG - chr7_1:54035538-54035557 None:intergenic 10.0%
!!! TATTTTATATACGATTTTAA+TGG - chr7_1:54035539-54035558 None:intergenic 10.0%
!! ATTAAAATCGTATATAAAAT+AGG + chr7_1:54035538-54035557 Msa1024580:three_prime_UTR 10.0%
!! TAACATCATTAAAATTTAGT+CGG - chr7_1:54029596-54029615 None:intergenic 15.0%
!!! GCTAATTTTTAATTAAAACA+AGG + chr7_1:54029875-54029894 Msa1024580:intron 15.0%
!! TATTATTCTATTCTATGATT+AGG + chr7_1:54029941-54029960 Msa1024580:intron 15.0%
!! CAATGATTCAAATATAAATA+AGG - chr7_1:54030148-54030167 None:intergenic 15.0%
!! ATTAACTATAATTGATTATG+TGG + chr7_1:54030338-54030357 Msa1024580:intron 15.0%
!! CTAAAAAAATTTCAATCATT+AGG - chr7_1:54030910-54030929 None:intergenic 15.0%
!! TTAATTATAAGTTAGATGAA+AGG - chr7_1:54031850-54031869 None:intergenic 15.0%
!!! AATACTATAGCTTTAAATTA+TGG + chr7_1:54032039-54032058 Msa1024580:intron 15.0%
!!! ATGAAAATTGTTTTAAATTC+CGG - chr7_1:54032207-54032226 None:intergenic 15.0%
!! AAATTCAGAATTTAAAAGAA+TGG - chr7_1:54032669-54032688 None:intergenic 15.0%
!! AATTGCACAAAATTAATTAA+AGG - chr7_1:54032824-54032843 None:intergenic 15.0%
!! TGATTAAAAAAATCTTAAAG+AGG - chr7_1:54033061-54033080 None:intergenic 15.0%
!! AATTCTAAATTATAGATCAA+TGG - chr7_1:54033549-54033568 None:intergenic 15.0%
!!! TCTATAATTTAGAATTTCAA+TGG + chr7_1:54033553-54033572 Msa1024580:intron 15.0%
!! AAAAAAAAAAGATCAAATCT+TGG + chr7_1:54033848-54033867 Msa1024580:intron 15.0%
!!! CTTATTAATTTAAAACATTG+TGG + chr7_1:54034066-54034085 Msa1024580:intron 15.0%
!!! ATATTTTCTTTTAGCATTTT+AGG - chr7_1:54034218-54034237 None:intergenic 15.0%
!! ATTACAGTGATTAAAAAATA+TGG + chr7_1:54034236-54034255 Msa1024580:intron 15.0%
!!! AAAAGAAGTTATTTTTTTGA+CGG + chr7_1:54034384-54034403 Msa1024580:intron 15.0%
!!! CATTACTTTTTTTTTTTTGA+AGG + chr7_1:54034466-54034485 Msa1024580:intron 15.0%
!!! TCTATTATTTAATTTATTGG+GGG + chr7_1:54035100-54035119 Msa1024580:three_prime_UTR 15.0%
!!! TTCCCTTTTTGTTTTAAATA+AGG + chr7_1:54029828-54029847 Msa1024580:intron 20.0%
!!! AGCCTTATTTAAAACAAAAA+GGG - chr7_1:54029833-54029852 None:intergenic 20.0%
!!! AAGCCTTATTTAAAACAAAA+AGG - chr7_1:54029834-54029853 None:intergenic 20.0%
!!! AAAGTGTGAAATTGATTTTA+GGG - chr7_1:54030599-54030618 None:intergenic 20.0%
!!! CAATTTATCGTTTTCATATA+TGG - chr7_1:54031220-54031239 None:intergenic 20.0%
!! AATTGTACTAAACTGTTTAT+AGG + chr7_1:54031432-54031451 Msa1024580:intron 20.0%
!! ACAAAAATTTCATTCTTAAC+AGG + chr7_1:54031663-54031682 Msa1024580:intron 20.0%
!! ATTCATAATTCACATTCAAA+AGG - chr7_1:54032022-54032041 None:intergenic 20.0%
!!! TACATATTTTACTTACCATT+GGG - chr7_1:54032600-54032619 None:intergenic 20.0%
!!! ATACATATTTTACTTACCAT+TGG - chr7_1:54032601-54032620 None:intergenic 20.0%
!! TTGACAATTAATGTAAACTT+AGG - chr7_1:54032631-54032650 None:intergenic 20.0%
!! TGTGAATTTGAATTAATTTC+AGG + chr7_1:54032868-54032887 Msa1024580:intron 20.0%
!! AAAGATTAAGCAATTCAAAA+GGG - chr7_1:54033203-54033222 None:intergenic 20.0%
!! AAAAGATTAAGCAATTCAAA+AGG - chr7_1:54033204-54033223 None:intergenic 20.0%
!! TTCAGTTGAAATATGATTTA+TGG - chr7_1:54033321-54033340 None:intergenic 20.0%
!! TTAAAAAGAACTTTGTCTTT+CGG + chr7_1:54033465-54033484 Msa1024580:three_prime_UTR 20.0%
!! ATAACATGTTATAAGAAGTA+TGG + chr7_1:54033592-54033611 Msa1024580:intron 20.0%
!!! ATGGGTCTTAAATTTTTTTA+TGG + chr7_1:54033694-54033713 Msa1024580:intron 20.0%
!!! GTTTTGAAAAGAAGAATATT+TGG - chr7_1:54034926-54034945 None:intergenic 20.0%
!! TAGGATTTAAAAGAATCATT+TGG - chr7_1:54035050-54035069 None:intergenic 20.0%
!!! TCTTTTAAATCCTAAAGTTT+AGG + chr7_1:54035056-54035075 Msa1024580:three_prime_UTR 20.0%
! CTTAAAACTACAAAAAGTGA+AGG - chr7_1:54029207-54029226 None:intergenic 25.0%
!! ATTTTGTCCTCTTTTTACAA+TGG + chr7_1:54029227-54029246 Msa1024580:exon 25.0%
!! TTTTGTCCTCTTTTTACAAT+GGG + chr7_1:54029228-54029247 Msa1024580:exon 25.0%
!!! AATTCTCAATGTTTTTGCAA+CGG - chr7_1:54029701-54029720 None:intergenic 25.0%
!!! TACTTTTTTTAAACAGCCAT+GGG + chr7_1:54030034-54030053 Msa1024580:intron 25.0%
!! TGAACAATTTTATTACCTGT+AGG - chr7_1:54030285-54030304 None:intergenic 25.0%
!!! GTATTCTCTATTTTTACAGT+TGG + chr7_1:54030374-54030393 Msa1024580:intron 25.0%
!!! GAAAGTGTGAAATTGATTTT+AGG - chr7_1:54030600-54030619 None:intergenic 25.0%
!! GTTCTTTAATTTCTCTATAG+CGG + chr7_1:54030929-54030948 Msa1024580:intron 25.0%
! AAACTGTTTATAGGCTTATT+TGG + chr7_1:54031441-54031460 Msa1024580:intron 25.0%
! CATTCATCAACTTTATAGTT+TGG - chr7_1:54031884-54031903 None:intergenic 25.0%
! ATTTCAGTTTCACTAGAATA+AGG - chr7_1:54031913-54031932 None:intergenic 25.0%
! TACTCAAATTTCAATGTTTG+CGG + chr7_1:54031982-54032001 Msa1024580:CDS 25.0%
!!! ATAGCTTTAAATTATGGTTG+TGG + chr7_1:54032045-54032064 Msa1024580:intron 25.0%
!! TATAATAGTTTGCAGAGTAT+CGG - chr7_1:54032084-54032103 None:intergenic 25.0%
!!! ATAACCACCATTTTATTTGT+AGG + chr7_1:54032491-54032510 Msa1024580:intron 25.0%
! TGATGTTATTAACACCATTT+GGG - chr7_1:54032735-54032754 None:intergenic 25.0%
! ATAACATAGACTTACCTATT+AGG - chr7_1:54032791-54032810 None:intergenic 25.0%
! TTTATGGAAGGAATCAAAAT+AGG - chr7_1:54032900-54032919 None:intergenic 25.0%
!! AGATTCAATACATTGGTTAT+TGG + chr7_1:54032954-54032973 Msa1024580:three_prime_UTR 25.0%
! TGCATTGGATATCAAATAAA+TGG + chr7_1:54033136-54033155 Msa1024580:three_prime_UTR 25.0%
! CAGAGGAAACTTATTTAAAA+TGG + chr7_1:54033254-54033273 Msa1024580:three_prime_UTR 25.0%
!!! ATACGATGATTTTTTTTGAG+AGG + chr7_1:54033277-54033296 Msa1024580:three_prime_UTR 25.0%
!!! TACGATGATTTTTTTTGAGA+GGG + chr7_1:54033278-54033297 Msa1024580:three_prime_UTR 25.0%
!!! TCTACACTTTGAAACATTTT+GGG + chr7_1:54034090-54034109 Msa1024580:intron 25.0%
!!! CATTTTTTACCTGAAAAACA+AGG - chr7_1:54034747-54034766 None:intergenic 25.0%
! ACTCTACTTGTTTAGATAAT+AGG + chr7_1:54034848-54034867 Msa1024580:three_prime_UTR 25.0%
! TACTTGTTTAGATAATAGGA+TGG + chr7_1:54034852-54034871 Msa1024580:three_prime_UTR 25.0%
!! TAGATTCTTCTTTTTGGATT+AGG + chr7_1:54034899-54034918 Msa1024580:three_prime_UTR 25.0%
!! GGTTTGTATAAAAAGTACAT+GGG - chr7_1:54034953-54034972 None:intergenic 25.0%
! AAACCCAAATGTTATATTAG+AGG + chr7_1:54034968-54034987 Msa1024580:three_prime_UTR 25.0%
! GTTCCTCTAATATAACATTT+GGG - chr7_1:54034974-54034993 None:intergenic 25.0%
! AGTTCCTCTAATATAACATT+TGG - chr7_1:54034975-54034994 None:intergenic 25.0%
! TAGAATTCGCTTAAATTGTA+GGG - chr7_1:54035141-54035160 None:intergenic 25.0%
! AAAAATTTCAACCTTATTCG+TGG + chr7_1:54035184-54035203 Msa1024580:three_prime_UTR 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr7_1:54035378-54035397 Msa1024580:intron 25.0%
! TTGTTGAAATATGTTATCAG+AGG - chr7_1:54035441-54035460 None:intergenic 25.0%
! AAAAGCAATCGTAAATAAAC+AGG + chr7_1:54035483-54035502 Msa1024580:three_prime_UTR 25.0%
! GAAAAAAGTAAGAAAAAGAG+GGG - chr7_1:54035685-54035704 None:intergenic 25.0%
! GGAAAAAAGTAAGAAAAAGA+GGG - chr7_1:54035686-54035705 None:intergenic 25.0%
! TGGAAAAAAGTAAGAAAAAG+AGG - chr7_1:54035687-54035706 None:intergenic 25.0%
! ACAACCATTATAATAGATGA+GGG - chr7_1:54036133-54036152 None:intergenic 25.0%
AAATTCAAGAAGAACAACCA+TGG + chr7_1:54029259-54029278 Msa1024580:CDS 30.0%
GTGACAACAATTTACAACTA+TGG + chr7_1:54029747-54029766 Msa1024580:intron 30.0%
CAACAATTTACAACTATGGT+TGG + chr7_1:54029751-54029770 Msa1024580:intron 30.0%
!!! CTACTTTTTTTAAACAGCCA+TGG + chr7_1:54030033-54030052 Msa1024580:intron 30.0%
! TTTTCATACTGAGCTTACTT+GGG + chr7_1:54030057-54030076 Msa1024580:CDS 30.0%
!!! TTCTCTATTTTTACAGTTGG+AGG + chr7_1:54030377-54030396 Msa1024580:intron 30.0%
AATACTTGACAACAGCAATT+TGG - chr7_1:54030469-54030488 None:intergenic 30.0%
! TGTTGTCAAGTATTCTCTTT+TGG + chr7_1:54030475-54030494 Msa1024580:CDS 30.0%
! GTTGTCAAGTATTCTCTTTT+GGG + chr7_1:54030476-54030495 Msa1024580:CDS 30.0%
AATCACAGTATTTAACCAAG+TGG + chr7_1:54030629-54030648 Msa1024580:intron 30.0%
! AATCCTGGTAATCTAAAGTT+CGG - chr7_1:54030755-54030774 None:intergenic 30.0%
AAGATCTGCAACTGAAATTT+AGG - chr7_1:54030867-54030886 None:intergenic 30.0%
!!! CAGATCTTTTTCAAATTCTG+CGG + chr7_1:54030879-54030898 Msa1024580:intron 30.0%
CTTACTTGATCTTTCAACTA+TGG + chr7_1:54031145-54031164 Msa1024580:CDS 30.0%
CATGATATACATTGTTGAAC+AGG + chr7_1:54031279-54031298 Msa1024580:intron 30.0%
ATATACATTGTTGAACAGGA+AGG + chr7_1:54031283-54031302 Msa1024580:intron 30.0%
! TGCTTTGTTATCTGAATATG+TGG + chr7_1:54031393-54031412 Msa1024580:CDS 30.0%
! ATATGTGGTTGATACAATTC+AGG + chr7_1:54031408-54031427 Msa1024580:CDS 30.0%
CATAAGCGCTTATCATATAA+GGG - chr7_1:54031601-54031620 None:intergenic 30.0%
ATAATCTTGCTACCAATAGT+TGG + chr7_1:54031727-54031746 Msa1024580:CDS 30.0%
GTTAGATGAAAGGAAACATA+TGG - chr7_1:54031840-54031859 None:intergenic 30.0%
CTCTGCAAACTATTATATTG+CGG + chr7_1:54032087-54032106 Msa1024580:intron 30.0%
TATTATATTGCGGAAAAGTG+TGG + chr7_1:54032097-54032116 Msa1024580:intron 30.0%
GTACCATCCTACAAATAAAA+TGG - chr7_1:54032501-54032520 None:intergenic 30.0%
CAATAACAAAGTAGCAAAGT+AGG - chr7_1:54032551-54032570 None:intergenic 30.0%
!! CTACTTTGCTACTTTGTTAT+TGG + chr7_1:54032549-54032568 Msa1024580:CDS 30.0%
GTGATGTTATTAACACCATT+TGG - chr7_1:54032736-54032755 None:intergenic 30.0%
TTTGAATTAATTTCAGGCCT+TGG + chr7_1:54032874-54032893 Msa1024580:intron 30.0%
TTGATTCCTTCCATAAATGA+AGG + chr7_1:54032903-54032922 Msa1024580:three_prime_UTR 30.0%
! ATTGAATCTGCATTTGAGTT+TGG - chr7_1:54032943-54032962 None:intergenic 30.0%
CAAATGCAGATTCAATACAT+TGG + chr7_1:54032947-54032966 Msa1024580:three_prime_UTR 30.0%
! TTATTGCAAGCTTTGTGAAT+AGG + chr7_1:54033035-54033054 Msa1024580:three_prime_UTR 30.0%
! TCATATGTTTTGTGTCCTAT+TGG + chr7_1:54033078-54033097 Msa1024580:three_prime_UTR 30.0%
TCCTATTGGTATATGATTGA+AGG + chr7_1:54033092-54033111 Msa1024580:three_prime_UTR 30.0%
CCTATTGGTATATGATTGAA+GGG + chr7_1:54033093-54033112 Msa1024580:three_prime_UTR 30.0%
CTATTGGTATATGATTGAAG+GGG + chr7_1:54033094-54033113 Msa1024580:three_prime_UTR 30.0%
! ATTTTTCTTTACGAAAGCAG+AGG + chr7_1:54033237-54033256 Msa1024580:three_prime_UTR 30.0%
!! CAATGGTTAGCATTACTTTT+GGG - chr7_1:54033532-54033551 None:intergenic 30.0%
! TCAATGGTTAGCATTACTTT+TGG - chr7_1:54033533-54033552 None:intergenic 30.0%
! GAAGTATGGAATCTTTTGTT+CGG + chr7_1:54033606-54033625 Msa1024580:intron 30.0%
! TGTTCGGTTAAAAAAGTACA+AGG + chr7_1:54033622-54033641 Msa1024580:intron 30.0%
! GTTCGGTTAAAAAAGTACAA+GGG + chr7_1:54033623-54033642 Msa1024580:intron 30.0%
!! TATTGATTTACCAGAGAAAG+TGG + chr7_1:54033656-54033675 Msa1024580:intron 30.0%
ACAATCATTAATCTAGTCGT+GGG - chr7_1:54033907-54033926 None:intergenic 30.0%
AACAATCATTAATCTAGTCG+TGG - chr7_1:54033908-54033927 None:intergenic 30.0%
TTACCTACACACTTAATTGT+AGG + chr7_1:54033930-54033949 Msa1024580:intron 30.0%
TTACCTACAATTAAGTGTGT+AGG - chr7_1:54033936-54033955 None:intergenic 30.0%
!! TGTTTAAAAGAAAGTGTTGC+TGG - chr7_1:54034026-54034045 None:intergenic 30.0%
!!! GTCTACACTTTGAAACATTT+TGG + chr7_1:54034089-54034108 Msa1024580:intron 30.0%
AAAATTGAACTCACACAAAG+TGG + chr7_1:54034124-54034143 Msa1024580:intron 30.0%
ACACAAACTCACAAAGTATA+CGG - chr7_1:54034579-54034598 None:intergenic 30.0%
! TTTTTACCTGAAAAACAAGG+TGG - chr7_1:54034744-54034763 None:intergenic 30.0%
!!! AACTTTTTAGCTCTAGTTTG+AGG - chr7_1:54034793-54034812 None:intergenic 30.0%
AAACAAGTAGAGTTTCATGA+AGG - chr7_1:54034841-54034860 None:intergenic 30.0%
! GTGAAGTAGATTCTTCTTTT+TGG + chr7_1:54034893-54034912 Msa1024580:three_prime_UTR 30.0%
! GGGTTTGTATAAAAAGTACA+TGG - chr7_1:54034954-54034973 None:intergenic 30.0%
GTACAACTAACCTAAACTTT+AGG - chr7_1:54035069-54035088 None:intergenic 30.0%
CTAGAATTCGCTTAAATTGT+AGG - chr7_1:54035142-54035161 None:intergenic 30.0%
GGTGTATAATAATAGAGGAT+CGG - chr7_1:54035244-54035263 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+TGG - chr7_1:54035269-54035288 None:intergenic 30.0%
! CGAAGGATTGATTTATCTTT+CGG - chr7_1:54035569-54035588 None:intergenic 30.0%
TACTGATATCTTACAGAAAG+TGG + chr7_1:54035868-54035887 Msa1024580:three_prime_UTR 30.0%
CATTGCATTCTGCAATTAAT+TGG - chr7_1:54035931-54035950 None:intergenic 30.0%
CTTACCCTCATCTATTATAA+TGG + chr7_1:54036126-54036145 Msa1024580:three_prime_UTR 30.0%
CACAACCATTATAATAGATG+AGG - chr7_1:54036134-54036153 None:intergenic 30.0%
TTTGGAGAATGGTAATCCAA+AGG + chr7_1:54029284-54029303 Msa1024580:CDS 35.0%
AACATCCAAGAGGTTATTCT+TGG + chr7_1:54029444-54029463 Msa1024580:CDS 35.0%
GTCACAAAATTGTTGAGTTC+AGG + chr7_1:54029646-54029665 Msa1024580:intron 35.0%
! GTTTTCATACTGAGCTTACT+TGG + chr7_1:54030056-54030075 Msa1024580:CDS 35.0%
! TAAGGGTGCAATAAGTTCAT+TGG - chr7_1:54030130-54030149 None:intergenic 35.0%
GACTTCTTAATGCAACATGT+GGG + chr7_1:54030399-54030418 Msa1024580:CDS 35.0%
AAGAAGAAGGTTTGAAAGGA+TGG - chr7_1:54030504-54030523 None:intergenic 35.0%
GTGAGTTCAACAAATCGTTT+AGG + chr7_1:54030669-54030688 Msa1024580:intron 35.0%
TGATTGATGCAGTCTCAATT+CGG + chr7_1:54030797-54030816 Msa1024580:intron 35.0%
GAATTCACTAATGCTGCTAT+TGG + chr7_1:54030999-54031018 Msa1024580:CDS 35.0%
TGAATAGCAATGGAAGCAAA+TGG - chr7_1:54031035-54031054 None:intergenic 35.0%
!!! ATTGGATTTTGGAGTAGCTT+TGG + chr7_1:54031343-54031362 Msa1024580:CDS 35.0%
GCATAAGCGCTTATCATATA+AGG - chr7_1:54031602-54031621 None:intergenic 35.0%
GAAATGAATTTCATGACTGC+AGG + chr7_1:54031928-54031947 Msa1024580:intron 35.0%
! ATTTCCTTAGGTGTTGCATT+GGG + chr7_1:54031953-54031972 Msa1024580:CDS 35.0%
! GACTTTTTATGTGTCTGCAT+TGG - chr7_1:54032152-54032171 None:intergenic 35.0%
ATAAAAAGTCCCTTGTATCG+CGG + chr7_1:54032162-54032181 Msa1024580:intron 35.0%
! TGTGATTGTTGCTTGGATAA+TGG + chr7_1:54032291-54032310 Msa1024580:CDS 35.0%
! GTGATTGTTGCTTGGATAAT+GGG + chr7_1:54032292-54032311 Msa1024580:CDS 35.0%
!! TTGGATAATGGGTGTGAAAA+TGG + chr7_1:54032303-54032322 Msa1024580:CDS 35.0%
CCATCCTACAAATAAAATGG+TGG - chr7_1:54032498-54032517 None:intergenic 35.0%
!! CCACCATTTTATTTGTAGGA+TGG + chr7_1:54032495-54032514 Msa1024580:intron 35.0%
AGTAGCAAAGTAGGAGAATA+AGG - chr7_1:54032542-54032561 None:intergenic 35.0%
!!! TGCAGTTTTAAGTGCCTAAT+AGG + chr7_1:54032774-54032793 Msa1024580:exon 35.0%
TTCCTTCCATAAATGAAGGA+TGG + chr7_1:54032907-54032926 Msa1024580:three_prime_UTR 35.0%
TACCATCCTTCATTTATGGA+AGG - chr7_1:54032912-54032931 None:intergenic 35.0%
ATGCTACCATCCTTCATTTA+TGG - chr7_1:54032916-54032935 None:intergenic 35.0%
! TCATTTTGTCACATCCAGAT+AGG + chr7_1:54032978-54032997 Msa1024580:three_prime_UTR 35.0%
CCCTTCAATCATATACCAAT+AGG - chr7_1:54033096-54033115 None:intergenic 35.0%
TGGAATTGTTCTCATGAGTT+TGG + chr7_1:54033156-54033175 Msa1024580:three_prime_UTR 35.0%
GGAATTGTTCTCATGAGTTT+GGG + chr7_1:54033157-54033176 Msa1024580:three_prime_UTR 35.0%
TTAAGTTCGACATCGTGATA+GGG + chr7_1:54033380-54033399 Msa1024580:three_prime_UTR 35.0%
AAAAGAACTTTGTCTTTCGG+TGG + chr7_1:54033468-54033487 Msa1024580:intron 35.0%
!! GTTAGCATTACTTTTGGGTA+TGG - chr7_1:54033527-54033546 None:intergenic 35.0%
TAAGACCCATGCAGTTTATT+GGG - chr7_1:54033684-54033703 None:intergenic 35.0%
TTAAGACCCATGCAGTTTAT+TGG - chr7_1:54033685-54033704 None:intergenic 35.0%
! TGCTGACGGAAATTTTTACA+AGG - chr7_1:54034186-54034205 None:intergenic 35.0%
! AAAATTTCCGTCAGCAGTTT+TGG + chr7_1:54034190-54034209 Msa1024580:intron 35.0%
!! CAAAACACTGATAGTTTTGC+AGG - chr7_1:54034359-54034378 None:intergenic 35.0%
! TCTAATGGGTACTATGTTGT+AGG - chr7_1:54034629-54034648 None:intergenic 35.0%
CAACATAGTACCCATTAGAA+TGG + chr7_1:54034630-54034649 Msa1024580:intron 35.0%
TGAAAAACAAGGTGGCATTT+AGG - chr7_1:54034736-54034755 None:intergenic 35.0%
!!! TAAATGCCACCTTGTTTTTC+AGG + chr7_1:54034735-54034754 Msa1024580:intron 35.0%
ACAAAGATATGCCACGAATA+AGG - chr7_1:54035198-54035217 None:intergenic 35.0%
! TGGAGGGTGTATAATAATAG+AGG - chr7_1:54035249-54035268 None:intergenic 35.0%
TGCTTATATTAGTGACTGGA+GGG - chr7_1:54035265-54035284 None:intergenic 35.0%
TTGCTTATATTAGTGACTGG+AGG - chr7_1:54035266-54035285 None:intergenic 35.0%
! TTTTAACATAGTACACCCTC+CGG - chr7_1:54035400-54035419 None:intergenic 35.0%
! CAACAAAGTGAGCAATTTTG+AGG + chr7_1:54035455-54035474 Msa1024580:three_prime_UTR 35.0%
ATAATAACCGAAACTCTCAC+AGG - chr7_1:54035604-54035623 None:intergenic 35.0%
! AGGGTGTTTGTTTGGATATT+AGG - chr7_1:54035636-54035655 None:intergenic 35.0%
TTGGTGTGAATTGATGGAAA+GGG - chr7_1:54035655-54035674 None:intergenic 35.0%
! TTTGGTGTGAATTGATGGAA+AGG - chr7_1:54035656-54035675 None:intergenic 35.0%
!! AGAGATTTGGTGTGAATTGA+TGG - chr7_1:54035661-54035680 None:intergenic 35.0%
TGATATCTTACAGAAAGTGG+AGG + chr7_1:54035871-54035890 Msa1024580:three_prime_UTR 35.0%
!! TTAATTGGTACTCTGAGACA+TGG - chr7_1:54035916-54035935 None:intergenic 35.0%
TGCAGAATGCAATGCTTTAT+CGG + chr7_1:54035937-54035956 Msa1024580:three_prime_UTR 35.0%
CATCTCTCTTTCGTTTACAA+GGG + chr7_1:54036101-54036120 Msa1024580:three_prime_UTR 35.0%
ACTTACATCTTCAACTACGT+CGG + chr7_1:54036156-54036175 Msa1024580:three_prime_UTR 35.0%
! AGTACTTGTCTCACTTGCTA+TGG - chr7_1:54029174-54029193 None:intergenic 40.0%
CGAGAACCCATTGTAAAAAG+AGG - chr7_1:54029237-54029256 None:intergenic 40.0%
! AGAAGAACAACCATGGCTTT+TGG + chr7_1:54029266-54029285 Msa1024580:CDS 40.0%
TTACCATTCTCCAAAAGCCA+TGG - chr7_1:54029279-54029298 None:intergenic 40.0%
TAATCCAAAGGTCTTGACCA+AGG + chr7_1:54029296-54029315 Msa1024580:CDS 40.0%
ATGATCAGATTTCTTGCGCA+AGG - chr7_1:54029376-54029395 None:intergenic 40.0%
TGATCATACTCTTGTGTCCA+AGG + chr7_1:54029389-54029408 Msa1024580:CDS 40.0%
TGGTACCAAGAATAACCTCT+TGG - chr7_1:54029452-54029471 None:intergenic 40.0%
AACTTACTCTTCCTAAGCCA+AGG - chr7_1:54029524-54029543 None:intergenic 40.0%
TGTTGTCACAACTACAACTG+CGG - chr7_1:54029736-54029755 None:intergenic 40.0%
AAGCTCAGTATGAAAACCCA+TGG - chr7_1:54030053-54030072 None:intergenic 40.0%
AGACAAATTGCCTTCTTCAC+TGG + chr7_1:54030258-54030277 Msa1024580:intron 40.0%
GGACTTCTTAATGCAACATG+TGG + chr7_1:54030398-54030417 Msa1024580:CDS 40.0%
GCACAAGAAGAAGGTTTGAA+AGG - chr7_1:54030508-54030527 None:intergenic 40.0%
TCAAACCTTCTTCTTGTGCT+TGG + chr7_1:54030509-54030528 Msa1024580:CDS 40.0%
!! CATATTTTTGCTCCACTCCA+AGG - chr7_1:54030565-54030584 None:intergenic 40.0%
ACCAAGTGGTTGATCTTAAG+TGG + chr7_1:54030643-54030662 Msa1024580:intron 40.0%
ACCACTTAAGATCAACCACT+TGG - chr7_1:54030647-54030666 None:intergenic 40.0%
!! TTCCTTTCCTCTGGAATCAA+AGG + chr7_1:54030773-54030792 Msa1024580:intron 40.0%
!! TCCTTTCCTCTGGAATCAAA+GGG + chr7_1:54030774-54030793 Msa1024580:intron 40.0%
! GTCTCAATTCGGTTTTACTG+TGG + chr7_1:54030808-54030827 Msa1024580:intron 40.0%
GCACTGAATGTGAATAGCAA+TGG - chr7_1:54031045-54031064 None:intergenic 40.0%
GATCTTGACAAGTAGAGTGA+AGG - chr7_1:54031093-54031112 None:intergenic 40.0%
ATCTGCTAGCATTGTGATGT+TGG + chr7_1:54031110-54031129 Msa1024580:CDS 40.0%
TCTTTCAACTATGGACACAC+AGG + chr7_1:54031154-54031173 Msa1024580:CDS 40.0%
ATTGTTGAACAGGAAGGTGA+AGG + chr7_1:54031289-54031308 Msa1024580:intron 40.0%
! AAGAGGCTGTGATTGGATTT+TGG + chr7_1:54031332-54031351 Msa1024580:CDS 40.0%
!!! GATTTTGGAGTAGCTTTGGT+TGG + chr7_1:54031347-54031366 Msa1024580:CDS 40.0%
!!! AGGCTTATTTGGTGTGCTTT+TGG + chr7_1:54031452-54031471 Msa1024580:intron 40.0%
GTATAAGCTATGAGCGTGTT+TGG + chr7_1:54031507-54031526 Msa1024580:intron 40.0%
AACAGGATGCATCAGATTCA+TGG + chr7_1:54031680-54031699 Msa1024580:intron 40.0%
ACAGGATGCATCAGATTCAT+GGG + chr7_1:54031681-54031700 Msa1024580:intron 40.0%
! TTGGTAGCAAGATTATGCTG+AGG - chr7_1:54031723-54031742 None:intergenic 40.0%
TTTCGCTTTCAAGAACAAGC+TGG + chr7_1:54031780-54031799 Msa1024580:CDS 40.0%
! CATTTCCTTAGGTGTTGCAT+TGG + chr7_1:54031952-54031971 Msa1024580:CDS 40.0%
TAAATTATGGTTGTGGTCCG+TGG + chr7_1:54032052-54032071 Msa1024580:intron 40.0%
GCTTTGGCAATTATAGTCAC+AGG + chr7_1:54032361-54032380 Msa1024580:CDS 40.0%
GGTACTTCTCACTACTTGAA+AGG + chr7_1:54032516-54032535 Msa1024580:CDS 40.0%
TTTGTGCAAAGAACACCCAA+TGG + chr7_1:54032582-54032601 Msa1024580:CDS 40.0%
CATTTGGGTCTGTGGAAAAA+AGG - chr7_1:54032720-54032739 None:intergenic 40.0%
!!! CTTTTTTCCACAGACCCAAA+TGG + chr7_1:54032718-54032737 Msa1024580:intron 40.0%
ATTAACACCATTTGGGTCTG+TGG - chr7_1:54032728-54032747 None:intergenic 40.0%
GAAGGAATCAAAATAGGCCA+AGG - chr7_1:54032894-54032913 None:intergenic 40.0%
! TTTTGTCACATCCAGATAGG+AGG + chr7_1:54032981-54033000 Msa1024580:three_prime_UTR 40.0%
TTTGTCACATCCAGATAGGA+GGG + chr7_1:54032982-54033001 Msa1024580:three_prime_UTR 40.0%
! ACTTTTTGTTCCCTCCTATC+TGG - chr7_1:54032995-54033014 None:intergenic 40.0%
GTTAAGTTCGACATCGTGAT+AGG + chr7_1:54033379-54033398 Msa1024580:three_prime_UTR 40.0%
TTATTGGGTTCCACTTTCTC+TGG - chr7_1:54033669-54033688 None:intergenic 40.0%
TGGAACCCAATAAACTGCAT+GGG + chr7_1:54033676-54033695 Msa1024580:intron 40.0%
ATTGAACTCACACAAAGTGG+TGG + chr7_1:54034127-54034146 Msa1024580:intron 40.0%
TTGAACTCACACAAAGTGGT+GGG + chr7_1:54034128-54034147 Msa1024580:intron 40.0%
TTAGGAACCAAAACTGCTGA+CGG - chr7_1:54034200-54034219 None:intergenic 40.0%
TCAACGGTGACCATTCTAAT+GGG - chr7_1:54034643-54034662 None:intergenic 40.0%
ATCAACGGTGACCATTCTAA+TGG - chr7_1:54034644-54034663 None:intergenic 40.0%
!!! TCAAAGGCTAGTGTTGCTTT+TGG + chr7_1:54034679-54034698 Msa1024580:intron 40.0%
!!! CAAAGGCTAGTGTTGCTTTT+GGG + chr7_1:54034680-54034699 Msa1024580:intron 40.0%
AGTAGAGTTTCATGAAGGTG+AGG - chr7_1:54034836-54034855 None:intergenic 40.0%
TAATAGGATGGTCGTGCTTA+AGG + chr7_1:54034864-54034883 Msa1024580:three_prime_UTR 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr7_1:54035381-54035400 Msa1024580:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + chr7_1:54035382-54035401 Msa1024580:intron 40.0%
!! TGATGGAAAGGGTGTTTGTT+TGG - chr7_1:54035644-54035663 None:intergenic 40.0%
GAAAAAGAGGGGAAGAGATT+TGG - chr7_1:54035674-54035693 None:intergenic 40.0%
GATATCAGTATATCGCTGCT+GGG - chr7_1:54035858-54035877 None:intergenic 40.0%
AGATATCAGTATATCGCTGC+TGG - chr7_1:54035859-54035878 None:intergenic 40.0%
ACGACACGAGCATAATCAAT+GGG - chr7_1:54036055-54036074 None:intergenic 40.0%
AACGACACGAGCATAATCAA+TGG - chr7_1:54036056-54036075 None:intergenic 40.0%
CCTTGTAAACGAAAGAGAGA+TGG - chr7_1:54036103-54036122 None:intergenic 40.0%
CCATCTCTCTTTCGTTTACA+AGG + chr7_1:54036100-54036119 Msa1024580:three_prime_UTR 40.0%
CTTACATCTTCAACTACGTC+GGG + chr7_1:54036157-54036176 Msa1024580:three_prime_UTR 40.0%
!! CAACCATGGCTTTTGGAGAA+TGG + chr7_1:54029273-54029292 Msa1024580:CDS 45.0%
TTGACCAAGGAAGCAAGACA+TGG + chr7_1:54029309-54029328 Msa1024580:CDS 45.0%
ATGTCCATGTCTTGCTTCCT+TGG - chr7_1:54029316-54029335 None:intergenic 45.0%
AAGGAAGCAAGACATGGACA+TGG + chr7_1:54029315-54029334 Msa1024580:CDS 45.0%
CTGAGAAGACATGTTATGCG+CGG - chr7_1:54029352-54029371 None:intergenic 45.0%
!! CGTGTTGGTTAACATCCAAG+AGG + chr7_1:54029434-54029453 Msa1024580:CDS 45.0%
GTGAGCTTTCTCACAGAGTA+AGG + chr7_1:54030101-54030120 Msa1024580:intron 45.0%
AGGTTCCAAGCACAAGAAGA+AGG - chr7_1:54030517-54030536 None:intergenic 45.0%
CTTGGAACCTCTCTACTTTG+TGG + chr7_1:54030527-54030546 Msa1024580:CDS 45.0%
AATGCCACCACAAAGTAGAG+AGG - chr7_1:54030537-54030556 None:intergenic 45.0%
GAGAACCTAAGTTCGAATCC+TGG + chr7_1:54030691-54030710 Msa1024580:intron 45.0%
ACCTAAGTTCGAATCCTGGT+TGG + chr7_1:54030695-54030714 Msa1024580:intron 45.0%
TCCAACCAGGATTCGAACTT+AGG - chr7_1:54030699-54030718 None:intergenic 45.0%
AGTTCGAATCCTGGTTGGAA+CGG + chr7_1:54030700-54030719 Msa1024580:intron 45.0%
ACCAGACTTTACTTACCTCC+TGG + chr7_1:54030729-54030748 Msa1024580:intron 45.0%
! TAATCTAAAGTTCGGCCAGG+AGG - chr7_1:54030747-54030766 None:intergenic 45.0%
! TGGTAATCTAAAGTTCGGCC+AGG - chr7_1:54030750-54030769 None:intergenic 45.0%
TGGCCGAACTTTAGATTACC+AGG + chr7_1:54030749-54030768 Msa1024580:intron 45.0%
TTACCAGGATTCCTTTCCTC+TGG + chr7_1:54030764-54030783 Msa1024580:intron 45.0%
ATTCCAGAGGAAAGGAATCC+TGG - chr7_1:54030770-54030789 None:intergenic 45.0%
ACCCTTTGATTCCAGAGGAA+AGG - chr7_1:54030778-54030797 None:intergenic 45.0%
CAATCACCCTTTGATTCCAG+AGG - chr7_1:54030783-54030802 None:intergenic 45.0%
AGGTGAAGGTGAGAACAATG+AGG + chr7_1:54031303-54031322 Msa1024580:CDS 45.0%
GAACAATGAGGCAGAAGAAG+AGG + chr7_1:54031315-54031334 Msa1024580:CDS 45.0%
!! TTGGAGTAGCTTTGGTTGGT+TGG + chr7_1:54031351-54031370 Msa1024580:CDS 45.0%
CAGGATGCATCAGATTCATG+GGG + chr7_1:54031682-54031701 Msa1024580:intron 45.0%
TCAGCTGCATTGCCAACTAT+TGG - chr7_1:54031742-54031761 None:intergenic 45.0%
TGACTGCAGGACATTTCCTT+AGG + chr7_1:54031941-54031960 Msa1024580:intron 45.0%
AGAACCCAATGCAACACCTA+AGG - chr7_1:54031960-54031979 None:intergenic 45.0%
GGCAGATATGGTCGAAATTG+CGG + chr7_1:54032118-54032137 Msa1024580:intron 45.0%
CAAGCAACAATCACACAGAG+AGG - chr7_1:54032286-54032305 None:intergenic 45.0%
CTCTCTGTGTGATTGTTGCT+TGG + chr7_1:54032284-54032303 Msa1024580:CDS 45.0%
AACTTCAACCTCCTTGAGAC+AGG + chr7_1:54032331-54032350 Msa1024580:CDS 45.0%
AAGCAAGAGAACCTGTCTCA+AGG - chr7_1:54032345-54032364 None:intergenic 45.0%
TGAGACAGGTTCTCTTGCTT+TGG + chr7_1:54032345-54032364 Msa1024580:CDS 45.0%
GTGGAACCCAATAAACTGCA+TGG + chr7_1:54033675-54033694 Msa1024580:intron 45.0%
CGGAAGTGAGCTGTACTATT+TGG - chr7_1:54034559-54034578 None:intergenic 45.0%
!!! GCTAGTGTTGCTTTTGGGTA+TGG + chr7_1:54034685-54034704 Msa1024580:intron 45.0%
ATGAAGGTGAGGATGACATC+TGG - chr7_1:54034825-54034844 None:intergenic 45.0%
AAGTTGCGAATCGATCGGAA+TGG - chr7_1:54035221-54035240 None:intergenic 45.0%
ATCGGAAGTTGCGAATCGAT+CGG - chr7_1:54035226-54035245 None:intergenic 45.0%
ACAGGAGAAGCAACAATCGA+AGG - chr7_1:54035586-54035605 None:intergenic 45.0%
TGCTTCTCCTGTGAGAGTTT+CGG + chr7_1:54035594-54035613 Msa1024580:three_prime_UTR 45.0%
CATGCAGTGTAGAACGAAGA+TGG - chr7_1:54035707-54035726 None:intergenic 45.0%
TTCGTTCTACACTGCATGCA+TGG + chr7_1:54035709-54035728 Msa1024580:intron 45.0%
TTGATCGAGATCGGCAATGA+AGG - chr7_1:54035750-54035769 None:intergenic 45.0%
!! GACATCGAGTTGATCGAGAT+CGG - chr7_1:54035759-54035778 None:intergenic 45.0%
!!! GTCGACCATGCTGATTTTGA+TGG + chr7_1:54035779-54035798 Msa1024580:three_prime_UTR 45.0%
!!! GACCATGCTGATTTTGATGG+TGG + chr7_1:54035782-54035801 Msa1024580:three_prime_UTR 45.0%
TGCCACCATCAAAATCAGCA+TGG - chr7_1:54035787-54035806 None:intergenic 45.0%
! GATGGTGGCATAAACCCTAA+CGG + chr7_1:54035797-54035816 Msa1024580:three_prime_UTR 45.0%
GACATGGTTGTCTGAAGAAC+TGG - chr7_1:54035900-54035919 None:intergenic 45.0%
!! TGTATTATCGACTCGAGCTC+TGG - chr7_1:54036028-54036047 None:intergenic 45.0%
! GCTCGTGTCGTTAAGAACAT+AGG + chr7_1:54036064-54036083 Msa1024580:three_prime_UTR 45.0%
!!! TAAATTATTAATTCTTTTTT+AGG + chr7_1:54033736-54033755 Msa1024580:intron 5.0%
!! ACTTATAATTAATAAAAAAT+GGG - chr7_1:54034411-54034430 None:intergenic 5.0%
!! AACTTATAATTAATAAAAAA+TGG - chr7_1:54034412-54034431 None:intergenic 5.0%
!! AAAAATGAAATATAATAATT+TGG - chr7_1:54034998-54035017 None:intergenic 5.0%
!!! TTATTATATTTCATTTTTTT+AGG + chr7_1:54035000-54035019 Msa1024580:three_prime_UTR 5.0%
!!! TATTATATTTCATTTTTTTA+GGG + chr7_1:54035001-54035020 Msa1024580:three_prime_UTR 5.0%
!!! ATATCTATTATTTAATTTAT+TGG + chr7_1:54035097-54035116 Msa1024580:three_prime_UTR 5.0%
!!! TATCTATTATTTAATTTATT+GGG + chr7_1:54035098-54035117 Msa1024580:three_prime_UTR 5.0%
GCTTCCTTGGTCAAGACCTT+TGG - chr7_1:54029303-54029322 None:intergenic 50.0%
AAGCAAGACATGGACATGGC+CGG + chr7_1:54029319-54029338 Msa1024580:CDS 50.0%
AAGACATGTTATGCGCGGTC+CGG - chr7_1:54029347-54029366 None:intergenic 50.0%
AAGCGAAGCACATCGAACCT+TGG - chr7_1:54029409-54029428 None:intergenic 50.0%
AGGTTCGATGTGCTTCGCTT+AGG + chr7_1:54029409-54029428 Msa1024580:CDS 50.0%
GGTTCGATGTGCTTCGCTTA+GGG + chr7_1:54029410-54029429 Msa1024580:CDS 50.0%
AGGGAAGAGAATGGACAGCT+TGG - chr7_1:54029472-54029491 None:intergenic 50.0%
AGGAATGGCAGGGAAGAGAA+TGG - chr7_1:54029481-54029500 None:intergenic 50.0%
AGCAACAATGGCAGCAGGAA+TGG - chr7_1:54029496-54029515 None:intergenic 50.0%
TAGTGAGCAACAATGGCAGC+AGG - chr7_1:54029501-54029520 None:intergenic 50.0%
GCCATTGTTGCTCACTACCT+TGG + chr7_1:54029504-54029523 Msa1024580:CDS 50.0%
GCCAAGGTAGTGAGCAACAA+TGG - chr7_1:54029508-54029527 None:intergenic 50.0%
GTTGCTCACTACCTTGGCTT+AGG + chr7_1:54029510-54029529 Msa1024580:CDS 50.0%
AAGCTCACACGTTCAGCAAG+TGG - chr7_1:54030089-54030108 None:intergenic 50.0%
ACCTGTAGGACCAGTGAAGA+AGG - chr7_1:54030271-54030290 None:intergenic 50.0%
GGAACCTCTCTACTTTGTGG+TGG + chr7_1:54030530-54030549 Msa1024580:CDS 50.0%
TGTGGTGGCATTGCTAACCT+TGG + chr7_1:54030545-54030564 Msa1024580:CDS 50.0%
TGGCATTGCTAACCTTGGAG+TGG + chr7_1:54030550-54030569 Msa1024580:CDS 50.0%
GCCAGGAGGTAAGTAAAGTC+TGG - chr7_1:54030733-54030752 None:intergenic 50.0%
GAAGGTTCTACTGTGAGTGC+AGG - chr7_1:54031075-54031094 None:intergenic 50.0%
GCAGAAGAAGAGGCTGTGAT+TGG + chr7_1:54031325-54031344 Msa1024580:CDS 50.0%
!! AGTAGCTTTGGTTGGTTGGC+TGG + chr7_1:54031355-54031374 Msa1024580:CDS 50.0%
ATGGTTGTGGTCCGTGGTTA+CGG + chr7_1:54032058-54032077 Msa1024580:intron 50.0%
! GCGGAAAAGTGTGGCAGATA+TGG + chr7_1:54032106-54032125 Msa1024580:intron 50.0%
CAATTGCAGCCGCGATACAA+GGG - chr7_1:54032174-54032193 None:intergenic 50.0%
TTGTATCGCGGCTGCAATTG+CGG + chr7_1:54032174-54032193 Msa1024580:intron 50.0%
CAAGAGAACCTGTCTCAAGG+AGG - chr7_1:54032342-54032361 None:intergenic 50.0%
AGTCACAGGCTTCACTTTGC+AGG + chr7_1:54032375-54032394 Msa1024580:CDS 50.0%
CAGTATATCGCTGCTGGGAT+CGG - chr7_1:54035853-54035872 None:intergenic 50.0%
TGCTTCGCTTAGGGTCGTGT+TGG + chr7_1:54029419-54029438 Msa1024580:CDS 55.0%
CAATGGCAGCAGGAATGGCA+GGG - chr7_1:54029491-54029510 None:intergenic 55.0%
ACAATGGCAGCAGGAATGGC+AGG - chr7_1:54029492-54029511 None:intergenic 55.0%
GCCTTCTTCACTGGTCCTAC+AGG + chr7_1:54030267-54030286 Msa1024580:CDS 55.0%
GGTCAATGACCGTTCCAACC+AGG - chr7_1:54030712-54030731 None:intergenic 55.0%
GGCAATGCAGCTGAACATGC+AGG + chr7_1:54031748-54031767 Msa1024580:CDS 55.0%
!! CAGAGTATCGGCCGTAACCA+CGG - chr7_1:54032072-54032091 None:intergenic 55.0%
GCAATTGCAGCCGCGATACA+AGG - chr7_1:54032175-54032194 None:intergenic 55.0%
CTGCAATTGCGGTTGCTGAC+CGG + chr7_1:54032185-54032204 Msa1024580:intron 55.0%
CATCGTCGTCTTCGCCGTTA+GGG - chr7_1:54035814-54035833 None:intergenic 55.0%
TCATCGTCGTCTTCGCCGTT+AGG - chr7_1:54035815-54035834 None:intergenic 55.0%
CTGCTGGGATCGGTGCAACA+TGG - chr7_1:54035843-54035862 None:intergenic 60.0%
GACATGGACATGGCCGGAGC+CGG + chr7_1:54029325-54029344 Msa1024580:CDS 65.0%
TGTTATGCGCGGTCCGGCTC+CGG - chr7_1:54029341-54029360 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 54029131 54036180 54029131 ID=Msa1024580;Name=Msa1024580
chr7_1 mRNA 54029131 54036180 54029131 ID=Msa1024580-mRNA-1;Parent=Msa1024580;Name=Msa1024580-mRNA-1;_AED=0.13;_eAED=0.13;_QI=115|1|1|1|0.71|0.66|15|1807|455
chr7_1 exon 54029131 54029536 54029131 ID=Msa1024580-mRNA-1:exon:10693;Parent=Msa1024580-mRNA-1
chr7_1 exon 54030050 54030117 54030050 ID=Msa1024580-mRNA-1:exon:10694;Parent=Msa1024580-mRNA-1
chr7_1 exon 54030260 54030288 54030260 ID=Msa1024580-mRNA-1:exon:10695;Parent=Msa1024580-mRNA-1
chr7_1 exon 54030393 54030589 54030393 ID=Msa1024580-mRNA-1:exon:10696;Parent=Msa1024580-mRNA-1
chr7_1 exon 54030985 54031197 54030985 ID=Msa1024580-mRNA-1:exon:10697;Parent=Msa1024580-mRNA-1
chr7_1 exon 54031301 54031429 54031301 ID=Msa1024580-mRNA-1:exon:10698;Parent=Msa1024580-mRNA-1
chr7_1 exon 54031685 54031801 54031685 ID=Msa1024580-mRNA-1:exon:10699;Parent=Msa1024580-mRNA-1
chr7_1 exon 54031950 54032003 54031950 ID=Msa1024580-mRNA-1:exon:10700;Parent=Msa1024580-mRNA-1
chr7_1 exon 54032280 54032396 54032280 ID=Msa1024580-mRNA-1:exon:10701;Parent=Msa1024580-mRNA-1
chr7_1 exon 54032513 54032603 54032513 ID=Msa1024580-mRNA-1:exon:10702;Parent=Msa1024580-mRNA-1
chr7_1 exon 54032731 54032795 54032731 ID=Msa1024580-mRNA-1:exon:10703;Parent=Msa1024580-mRNA-1
chr7_1 exon 54032890 54033486 54032890 ID=Msa1024580-mRNA-1:exon:10704;Parent=Msa1024580-mRNA-1
chr7_1 exon 54034757 54035268 54034757 ID=Msa1024580-mRNA-1:exon:10705;Parent=Msa1024580-mRNA-1
chr7_1 exon 54035418 54035652 54035418 ID=Msa1024580-mRNA-1:exon:10706;Parent=Msa1024580-mRNA-1
chr7_1 exon 54035721 54036180 54035721 ID=Msa1024580-mRNA-1:exon:10707;Parent=Msa1024580-mRNA-1
chr7_1 five_prime_UTR 54029131 54029245 54029131 ID=Msa1024580-mRNA-1:five_prime_utr;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54029246 54029536 54029246 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54030050 54030117 54030050 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54030260 54030288 54030260 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54030393 54030589 54030393 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54030985 54031197 54030985 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54031301 54031429 54031301 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54031685 54031801 54031685 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54031950 54032003 54031950 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54032280 54032396 54032280 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54032513 54032603 54032513 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 CDS 54032731 54032792 54032731 ID=Msa1024580-mRNA-1:cds;Parent=Msa1024580-mRNA-1
chr7_1 three_prime_UTR 54032793 54032795 54032793 ID=Msa1024580-mRNA-1:three_prime_utr;Parent=Msa1024580-mRNA-1
chr7_1 three_prime_UTR 54032890 54033486 54032890 ID=Msa1024580-mRNA-1:three_prime_utr;Parent=Msa1024580-mRNA-1
chr7_1 three_prime_UTR 54034757 54035268 54034757 ID=Msa1024580-mRNA-1:three_prime_utr;Parent=Msa1024580-mRNA-1
chr7_1 three_prime_UTR 54035418 54035652 54035418 ID=Msa1024580-mRNA-1:three_prime_utr;Parent=Msa1024580-mRNA-1
chr7_1 three_prime_UTR 54035721 54036180 54035721 ID=Msa1024580-mRNA-1:three_prime_utr;Parent=Msa1024580-mRNA-1
Gene Sequence

>Msa1024580

ATGGGTTCTCGTCAAATTCAAGAAGAACAACCATGGCTTTTGGAGAATGGTAATCCAAAGGTCTTGACCAAGGAAGCAAGACATGGACATGGCCGGAGCCGGACCGCGCATAACATGTCTTCTCAGTCCTTGCGCAAGAAATCTGATCATACTCTTGTGTCCAAGGTTCGATGTGCTTCGCTTAGGGTCGTGTTGGTTAACATCCAAGAGGTTATTCTTGGTACCAAGCTGTCCATTCTCTTCCCTGCCATTCCTGCTGCCATTGTTGCTCACTACCTTGGCTTAGGAAGACCATGGGTTTTCATACTGAGCTTACTTGGGCTTACACCACTTGCTGAACGTGTGAGCTTTCTCACAGAACAAATTGCCTTCTTCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATATTACTGAGCTGATCATAGCAATATTTGCTCTTAGCAGCAACCAAATTGCTGTTGTCAAGTATTCTCTTTTGGGTTCCATCCTTTCAAACCTTCTTCTTGTGCTTGGAACCTCTCTACTTTGTGGTGGCATTGCTAACCTTGGAGTGGAGCAAAAATATGACAGAAGACAAGCAGATGTGAATTCACTAATGCTGCTATTGGCATTGTTATGCCATTTGCTTCCATTGCTATTCACATTCAGTGCTGCATCACCTGCACTCACAGTAGAACCTTCACTCTACTTGTCAAGATCTGCTAGCATTGTGATGTTGGCTGCATATTTTGCTTACTTGATCTTTCAACTATGGACACACAGGCAATTATTTGAAGCTGAAGATGAAGGTGAAGGTGAGAACAATGAGGCAGAAGAAGAGGCTGTGATTGGATTTTGGAGTAGCTTTGGTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTATCTGAATATGTGGTTGATACAATTCAGGATGCATCAGATTCATGGGGTTTGTCTGTCAGTTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTCGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGTTCTGCTACTCAAATTTCAATGTTTGCGGTTCCTCTCTGTGTGATTGTTGCTTGGATAATGGGTGTGAAAATGGACTTGAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTTTGGCAATTATAGTCACAGGCTTCACTTTGCAGGATGGTACTTCTCACTACTTGAAAGGCCTTATTCTCCTACTTTGCTACTTTGTTATTGGTGCTTGCTTCTTTGTGCAAAGAACACCCAATGACCCAAATGGTGTTAATAACATCACAATTAAATCAGTCACTGATGCAGTTTTAAGTGCCTAA
Protein sequence

>Msa1024580

MGSRQIQEEQPWLLENGNPKVLTKEARHGHGRSRTAHNMSSQSLRKKSDHTLVSKVRCASLRVVLVNIQEVILGTKLSILFPAIPAAIVAHYLGLGRPWVFILSLLGLTPLAERVSFLTEQIAFFTGPTVGGLLNATCGNITELIIAIFALSSNQIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLGVEQKYDRRQADVNSLMLLLALLCHLLPLLFTFSAASPALTVEPSLYLSRSASIVMLAAYFAYLIFQLWTHRQLFEAEDEGEGENNEAEEEAVIGFWSSFGWLAGMTVFIALLSEYVVDTIQDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFAVPLCVIVAWIMGVKMDLNFNLLETGSLALAIIVTGFTLQDGTSHYLKGLILLLCYFVIGACFFVQRTPNDPNGVNNITIKSVTDAVLSA*