Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543880 | XP_003605903.1 | 97.464 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543880 | sp|P87027|SPG1_SCHPO | 45.455 | 187 | 102 | 0 | 90 | 276 | 9 | 195 | 2.65e-57 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543880 | G7JDG8 | 97.464 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 0.0 | 562 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0543880 | Msa0640410 | 0.855037 | 8.254090e-62 | -8.615850e-47 |
| Msa0543880 | Msa0678840 | 0.820849 | 5.519981e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543880 | MtrunA17_Chr4g0024431 | 97.464 | 276 | 7 | 0 | 1 | 276 | 1 | 276 | 0.0 | 562 |
| Msa0543880 | MtrunA17_Chr5g0443631 | 63.707 | 259 | 91 | 1 | 21 | 276 | 31 | 289 | 3.23e-111 | 322 |
| Msa0543880 | MtrunA17_Chr3g0109721 | 30.539 | 167 | 106 | 4 | 93 | 256 | 12 | 171 | 4.21e-14 | 69.3 |
| Msa0543880 | MtrunA17_Chr5g0433561 | 29.670 | 182 | 112 | 5 | 78 | 256 | 3 | 171 | 6.21e-14 | 68.9 |
| Msa0543880 | MtrunA17_Chr7g0265001 | 26.667 | 180 | 124 | 3 | 90 | 266 | 15 | 189 | 2.47e-13 | 67.4 |
| Msa0543880 | MtrunA17_Chr8g0390561 | 27.879 | 165 | 113 | 2 | 93 | 256 | 11 | 170 | 4.91e-13 | 66.2 |
| Msa0543880 | MtrunA17_Chr1g0180291 | 26.667 | 180 | 123 | 4 | 90 | 266 | 13 | 186 | 1.30e-12 | 65.5 |
| Msa0543880 | MtrunA17_Chr4g0055081 | 24.260 | 169 | 122 | 2 | 89 | 256 | 7 | 170 | 1.56e-12 | 65.1 |
| Msa0543880 | MtrunA17_Chr5g0400131 | 24.260 | 169 | 122 | 2 | 89 | 256 | 7 | 170 | 2.98e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543880 | AT3G21700.3 | 60.269 | 297 | 92 | 5 | 1 | 276 | 1 | 292 | 2.43e-111 | 323 |
| Msa0543880 | AT3G21700.1 | 59.933 | 297 | 92 | 6 | 1 | 276 | 1 | 291 | 1.92e-109 | 318 |
| Msa0543880 | AT5G54840.1 | 53.191 | 282 | 119 | 8 | 1 | 276 | 12 | 286 | 2.79e-91 | 272 |
| Msa0543880 | AT3G21700.2 | 52.459 | 244 | 89 | 6 | 1 | 223 | 1 | 238 | 2.43e-68 | 212 |
| Msa0543880 | AT5G54840.2 | 44.444 | 198 | 101 | 5 | 1 | 194 | 12 | 204 | 2.51e-40 | 139 |
| Msa0543880 | AT5G54840.3 | 55.714 | 140 | 57 | 3 | 59 | 194 | 66 | 204 | 7.96e-40 | 139 |
| Msa0543880 | AT4G19640.1 | 28.824 | 170 | 111 | 4 | 90 | 256 | 9 | 171 | 2.13e-14 | 70.5 |
| Msa0543880 | AT5G45130.1 | 28.824 | 170 | 111 | 4 | 90 | 256 | 9 | 171 | 5.52e-14 | 69.3 |
| Msa0543880 | AT2G44610.1 | 25.444 | 169 | 120 | 2 | 89 | 256 | 7 | 170 | 3.86e-13 | 67.4 |
| Msa0543880 | AT5G45130.2 | 29.268 | 164 | 106 | 4 | 96 | 256 | 23 | 179 | 6.40e-13 | 66.6 |
| Msa0543880 | AT5G03530.2 | 27.222 | 180 | 122 | 4 | 90 | 266 | 12 | 185 | 9.06e-13 | 66.2 |
| Msa0543880 | AT5G03530.1 | 27.222 | 180 | 122 | 4 | 90 | 266 | 12 | 185 | 9.06e-13 | 66.2 |
| Msa0543880 | AT5G59150.1 | 26.667 | 180 | 125 | 3 | 81 | 259 | 3 | 176 | 2.00e-12 | 65.5 |
| Msa0543880 | AT1G07410.1 | 24.852 | 169 | 121 | 2 | 92 | 259 | 13 | 176 | 6.14e-11 | 61.2 |
| Msa0543880 | AT4G19640.3 | 27.119 | 118 | 85 | 1 | 90 | 206 | 9 | 126 | 9.38e-11 | 60.5 |
Find 69 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAACTGTAAGGGTAATT+TGG | 0.157269 | 4_1:+31250163 | None:intergenic |
| TGAAACTGTAAGGGTAATTT+GGG | 0.232830 | 4_1:+31250164 | None:intergenic |
| CACGTATATCCTATTGTATC+TGG | 0.293441 | 4_1:-31249222 | Msa0543880:CDS |
| CTCAGCCATGAAAATGAAAA+AGG | 0.319557 | 4_1:+31250114 | None:intergenic |
| ACCTGGCTGCTTGCCTGAGC+AGG | 0.330688 | 4_1:+31249809 | None:intergenic |
| GCCTGCTCAGGCAAGCAGCC+AGG | 0.335224 | 4_1:-31249810 | Msa0543880:CDS |
| CACCGACTGCTTGCCTGCTC+AGG | 0.346195 | 4_1:-31249822 | Msa0543880:CDS |
| TTGTTGGGTGATTGCCAAAT+TGG | 0.353624 | 4_1:-31249636 | Msa0543880:CDS |
| ATATATGACTCTGAGCAAAA+TGG | 0.357355 | 4_1:+31250017 | None:intergenic |
| TTCACTCAAAATTAGCTTGT+TGG | 0.360359 | 4_1:-31249652 | Msa0543880:CDS |
| ATTGTTGTAGACGGCAATTC+CGG | 0.362768 | 4_1:-31248599 | Msa0543880:intron |
| TCACTCAAAATTAGCTTGTT+GGG | 0.368585 | 4_1:-31249651 | Msa0543880:CDS |
| ATGGTCCATTGCATATCAAT+AGG | 0.376812 | 4_1:+31248538 | None:intergenic |
| TTCGTAGTATTGAAACTGTA+AGG | 0.389486 | 4_1:+31250154 | None:intergenic |
| ATCTCCGCGGGCTTCGCTGT+TGG | 0.390597 | 4_1:-31249742 | Msa0543880:CDS |
| GTATTGGACATCTTTAGATT+TGG | 0.409338 | 4_1:-31246218 | Msa0543880:three_prime_UTR |
| CCAGCTTCCAATGGCATGTA+AGG | 0.422047 | 4_1:-31249092 | Msa0543880:CDS |
| GGTACAAAGAAGCAAGGAAA+TGG | 0.432118 | 4_1:-31248708 | Msa0543880:CDS |
| CAAGTCGATGCACATTAAAC+AGG | 0.439545 | 4_1:-31249036 | Msa0543880:intron |
| AGAAGCAAGGAAATGGAATC+AGG | 0.446817 | 4_1:-31248701 | Msa0543880:intron |
| TTGTACTTCCCAGATACAAT+AGG | 0.464379 | 4_1:+31249213 | None:intergenic |
| CAAAACTCTTCGACTTACCT+TGG | 0.467610 | 4_1:-31246898 | Msa0543880:CDS |
| CTGAATGAAATCATCAAACT+TGG | 0.473260 | 4_1:+31248564 | None:intergenic |
| TAAACAAATCAAATTACATA+TGG | 0.475223 | 4_1:-31246264 | Msa0543880:three_prime_UTR |
| ACGGCAATTCCGGTGTTGAT+AGG | 0.475548 | 4_1:-31248589 | Msa0543880:CDS |
| TGGAATGGAATGGGGTTGGA+TGG | 0.480211 | 4_1:+31250068 | None:intergenic |
| TTCAGCATTGCCATCTCCGC+GGG | 0.486533 | 4_1:-31249754 | Msa0543880:CDS |
| AACAGCGAAGCCCGCGGAGA+TGG | 0.486569 | 4_1:+31249744 | None:intergenic |
| GTTTATTTCAGCAGACACTT+TGG | 0.492544 | 4_1:+31246282 | None:intergenic |
| ACTCCTTCGCGCTGCGAAGG+AGG | 0.493460 | 4_1:-31249893 | Msa0543880:CDS |
| GAGGAAAGGACCAAATCAAA+TGG | 0.496937 | 4_1:-31249269 | Msa0543880:CDS |
| TTTATTTCAGTGTTCTGGGA+TGG | 0.498640 | 4_1:-31248729 | Msa0543880:intron |
| GTCACTCCTTCGCGCTGCGA+AGG | 0.504957 | 4_1:-31249896 | Msa0543880:CDS |
| TGCCTGAGCAGGCAAGCAGT+CGG | 0.509410 | 4_1:+31249820 | None:intergenic |
| CCTTACATGCCATTGGAAGC+TGG | 0.517454 | 4_1:+31249092 | None:intergenic |
| GTGGAAAGGAATCTAAATGT+TGG | 0.519478 | 4_1:-31246872 | Msa0543880:CDS |
| AGATTCCTTTCCACTGTCCA+AGG | 0.525285 | 4_1:+31246881 | None:intergenic |
| ACTGAGTCCTTACATGCCAT+TGG | 0.527947 | 4_1:+31249085 | None:intergenic |
| AAAATGGAATGGAATGGGGT+TGG | 0.535669 | 4_1:+31250064 | None:intergenic |
| TGGTCCATTGCATATCAATA+GGG | 0.535828 | 4_1:+31248539 | None:intergenic |
| CTTCGACTTACCTTGGACAG+TGG | 0.548530 | 4_1:-31246891 | Msa0543880:CDS |
| AGCTCCCTATTGATATGCAA+TGG | 0.560194 | 4_1:-31248543 | Msa0543880:CDS |
| ACGTATATCCTATTGTATCT+GGG | 0.564779 | 4_1:-31249221 | Msa0543880:CDS |
| AAATCAAATGGACAAAACAT+TGG | 0.567322 | 4_1:-31249257 | Msa0543880:CDS |
| AAGAGCAGGGAGTGGAACAG+AGG | 0.569125 | 4_1:-31249288 | Msa0543880:CDS |
| CTGTACGTAGCATTAGCACC+TGG | 0.570834 | 4_1:+31249792 | None:intergenic |
| GTGTTGCAGGTGAAATATGT+TGG | 0.573288 | 4_1:-31249319 | Msa0543880:intron |
| TATTGTATCTGGGAAGTACA+AGG | 0.574671 | 4_1:-31249211 | Msa0543880:intron |
| ACTTACCTTGGACAGTGGAA+AGG | 0.576381 | 4_1:-31246886 | Msa0543880:CDS |
| ATCTCCGGAGCAACGATACA+CGG | 0.577259 | 4_1:+31249862 | None:intergenic |
| AAGCCTCCTTCGCAGCGCGA+AGG | 0.580558 | 4_1:+31249890 | None:intergenic |
| ACAGCCGTGTATCGTTGCTC+CGG | 0.583287 | 4_1:-31249866 | Msa0543880:CDS |
| GAGCTCGAAGAATACATCTC+CGG | 0.586436 | 4_1:+31249847 | None:intergenic |
| CAGGGAGTGGAACAGAGGAA+AGG | 0.595988 | 4_1:-31249283 | Msa0543880:CDS |
| ATCAGAAGACCAGCTTCCAA+TGG | 0.601240 | 4_1:-31249101 | Msa0543880:CDS |
| TCGTAGTATTGAAACTGTAA+GGG | 0.609858 | 4_1:+31250155 | None:intergenic |
| GCAATGGACCATCGCTAGTG+AGG | 0.615352 | 4_1:-31248527 | Msa0543880:intron |
| CTGAGCAAAATGGAATGAAG+CGG | 0.624941 | 4_1:+31250027 | None:intergenic |
| AGCGATTACCTCACTAGCGA+TGG | 0.627900 | 4_1:+31248519 | None:intergenic |
| ATTCAGCATTGCCATCTCCG+CGG | 0.630663 | 4_1:-31249755 | Msa0543880:CDS |
| GACAAAACATTGGTTGTGAG+TGG | 0.635995 | 4_1:-31249247 | Msa0543880:CDS |
| ACAGGCAAGAACATATGCAA+AGG | 0.636144 | 4_1:-31246996 | Msa0543880:intron |
| TGGGATGGTACAAAGAAGCA+AGG | 0.641092 | 4_1:-31248714 | Msa0543880:CDS |
| AACTTGGTTCCTATCAACAC+CGG | 0.647380 | 4_1:+31248580 | None:intergenic |
| TTGCAGAGAAGTTTCGACAG+TGG | 0.652079 | 4_1:+31249716 | None:intergenic |
| TGCACTTGAAAAGAACAAAG+TGG | 0.664540 | 4_1:+31246964 | None:intergenic |
| GAATCCAACAGCGAAGCCCG+CGG | 0.676951 | 4_1:+31249738 | None:intergenic |
| GAAACTGTAAGGGTAATTTG+GGG | 0.677919 | 4_1:+31250165 | None:intergenic |
| AATGGCATGTAAGGACTCAG+TGG | 0.696623 | 4_1:-31249083 | Msa0543880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATTTGATGATTTT+AGG | - | chr4_1:31247282-31247301 | Msa0543880:intron | 10.0% |
| !! | ATGTTTAATATTATATATGA+AGG | - | chr4_1:31247330-31247349 | Msa0543880:intron | 10.0% |
| !! | TGTTTAATATTATATATGAA+GGG | - | chr4_1:31247331-31247350 | Msa0543880:intron | 10.0% |
| !!! | ATTTTCATTTCAATTATATT+TGG | - | chr4_1:31247658-31247677 | Msa0543880:intron | 10.0% |
| !! | TATGAATATAAATTTATAAG+AGG | - | chr4_1:31248311-31248330 | Msa0543880:intron | 10.0% |
| !! | ATGAATATAAATTTATAAGA+GGG | - | chr4_1:31248312-31248331 | Msa0543880:intron | 10.0% |
| !!! | TAAATTTTGTCAAAATATTA+TGG | - | chr4_1:31248946-31248965 | Msa0543880:intron | 10.0% |
| !! | AATTGTAAATAAATGATTAT+GGG | + | chr4_1:31249383-31249402 | None:intergenic | 10.0% |
| !! | TAATTGTAAATAAATGATTA+TGG | + | chr4_1:31249384-31249403 | None:intergenic | 10.0% |
| !! | TTAAAAATTATTAGTTGTGT+CGG | - | chr4_1:31246996-31247015 | Msa0543880:intron | 15.0% |
| !! | GTTTAATATTATATATGAAG+GGG | - | chr4_1:31247332-31247351 | Msa0543880:intron | 15.0% |
| !! | TTAAGAATGAAAAATTGATT+CGG | + | chr4_1:31248228-31248247 | None:intergenic | 15.0% |
| !! | TCAATGTTTATCTTAAAATA+TGG | + | chr4_1:31248369-31248388 | None:intergenic | 15.0% |
| !! | CATATACTATAAAGTTAAAT+TGG | + | chr4_1:31248522-31248541 | None:intergenic | 15.0% |
| !! | TGTTTAATAATCATAATCAT+AGG | + | chr4_1:31248580-31248599 | None:intergenic | 15.0% |
| !! | ATTCATGATCAATTTAATTA+TGG | - | chr4_1:31248991-31249010 | Msa0543880:intron | 15.0% |
| !! | TAAACAAATCAAATTACATA+TGG | - | chr4_1:31250199-31250218 | Msa0543880:five_prime_UTR | 15.0% |
| !!! | GTTTTTTATTTATGAAGTAT+TGG | - | chr4_1:31250229-31250248 | Msa0543880:five_prime_UTR | 15.0% |
| !! | TTAAGTGTAATTACAAGTTT+CGG | + | chr4_1:31246964-31246983 | None:intergenic | 20.0% |
| !! | AGAAAATTACAAATTCACAT+TGG | + | chr4_1:31247631-31247650 | None:intergenic | 20.0% |
| !! | CTGAAATAAAACCAAAAAAT+AGG | + | chr4_1:31247724-31247743 | None:intergenic | 20.0% |
| !!! | TCAGGTAACATATATTATTT+TGG | - | chr4_1:31247780-31247799 | Msa0543880:intron | 20.0% |
| !!! | CAATCTTCTAAAAATTAAGA+TGG | + | chr4_1:31248042-31248061 | None:intergenic | 20.0% |
| !! | AAATTAGTAATAGTGTCAAT+AGG | + | chr4_1:31248717-31248736 | None:intergenic | 20.0% |
| !! | ACTATTACTAATTTCTTTGT+AGG | - | chr4_1:31248723-31248742 | Msa0543880:intron | 20.0% |
| !! | CTATTACTAATTTCTTTGTA+GGG | - | chr4_1:31248724-31248743 | Msa0543880:intron | 20.0% |
| !! | CGATCTAATAATTATTAATG+TGG | + | chr4_1:31249136-31249155 | None:intergenic | 20.0% |
| !!! | GAAAAACCAAATTTGAAATA+TGG | + | chr4_1:31249171-31249190 | None:intergenic | 20.0% |
| !! | TAAATAAATGATTATGGGTT+GGG | + | chr4_1:31249378-31249397 | None:intergenic | 20.0% |
| !! | TTTAAATGGATAGCAATAAA+AGG | - | chr4_1:31249837-31249856 | Msa0543880:CDS | 20.0% |
| ! | AAACAAAAATGGAATGGAAT+GGG | + | chr4_1:31246407-31246426 | None:intergenic | 25.0% |
| ! | AGAATGAAACAAAAATGGAA+TGG | + | chr4_1:31246413-31246432 | None:intergenic | 25.0% |
| ! | GGAATAGAATGAAACAAAAA+TGG | + | chr4_1:31246418-31246437 | None:intergenic | 25.0% |
| !! | TCAGACTTTTGTCTAAAAAA+TGG | - | chr4_1:31246545-31246564 | Msa0543880:intron | 25.0% |
| !! | TGTTTTTCACACAAATGAAT+TGG | - | chr4_1:31246775-31246794 | Msa0543880:intron | 25.0% |
| !!! | AAAAACTGGTTTTTCCAATT+TGG | + | chr4_1:31246844-31246863 | None:intergenic | 25.0% |
| !!! | AATTGGAAAAACCAGTTTTT+TGG | - | chr4_1:31246844-31246863 | Msa0543880:exon | 25.0% |
| ! | TCATATACTTACCAAAAAAC+TGG | + | chr4_1:31246858-31246877 | None:intergenic | 25.0% |
| !! | AATGTTTTGTCCATTTGATT+TGG | + | chr4_1:31247207-31247226 | None:intergenic | 25.0% |
| ! | AAATCAAATGGACAAAACAT+TGG | - | chr4_1:31247206-31247225 | Msa0543880:intron | 25.0% |
| ! | AATATTATATATGAAGGGGA+TGG | - | chr4_1:31247336-31247355 | Msa0543880:intron | 25.0% |
| !!! | GAAGAATCATTCCTATTTTT+TGG | - | chr4_1:31247710-31247729 | Msa0543880:intron | 25.0% |
| ! | AATTTCTGCTGAAAATTGAT+TGG | - | chr4_1:31247808-31247827 | Msa0543880:intron | 25.0% |
| !!! | TAACAACGTTTTATTCCAAA+AGG | - | chr4_1:31248408-31248427 | Msa0543880:intron | 25.0% |
| ! | ACATGTAAGACTAATCAATT+TGG | - | chr4_1:31248462-31248481 | Msa0543880:intron | 25.0% |
| !! | TATTCAGCTTTTCTCAATAA+AGG | + | chr4_1:31248495-31248514 | None:intergenic | 25.0% |
| ! | TAGGAATGACAAAACAATAA+AGG | + | chr4_1:31248561-31248580 | None:intergenic | 25.0% |
| ! | TTATTTACCAATTTGGTCAA+TGG | + | chr4_1:31249058-31249077 | None:intergenic | 25.0% |
| !!! | TAGAGTGTTATTTACCAATT+TGG | + | chr4_1:31249065-31249084 | None:intergenic | 25.0% |
| ! | AACGATCCATATTTCAAATT+TGG | - | chr4_1:31249162-31249181 | Msa0543880:intron | 25.0% |
| ! | GTAAATAAATGATTATGGGT+TGG | + | chr4_1:31249379-31249398 | None:intergenic | 25.0% |
| ! | CATTTGAACATTGAATTAAC+AGG | - | chr4_1:31249449-31249468 | Msa0543880:intron | 25.0% |
| !! | GATTTTCAGAAATCAATGAT+GGG | + | chr4_1:31249621-31249640 | None:intergenic | 25.0% |
| !! | AGATTTTCAGAAATCAATGA+TGG | + | chr4_1:31249622-31249641 | None:intergenic | 25.0% |
| !! | TTGAACATAGTTATTTCCAT+TGG | + | chr4_1:31249789-31249808 | None:intergenic | 25.0% |
| !!! | ACAAAAAGTGTGGTTTTAAA+TGG | - | chr4_1:31249823-31249842 | Msa0543880:CDS | 25.0% |
| ! | CTAGTGAGAAATAAAAGAAA+TGG | - | chr4_1:31249860-31249879 | Msa0543880:CDS | 25.0% |
| ! | TAGTGTGTGTTATGTTATTA+TGG | - | chr4_1:31249955-31249974 | Msa0543880:five_prime_UTR | 25.0% |
| !!! | TTATGGTTTTGTCAAACTTA+TGG | - | chr4_1:31249972-31249991 | Msa0543880:five_prime_UTR | 25.0% |
| ! | TCGATTCAAACATGTTATTA+AGG | - | chr4_1:31249995-31250014 | Msa0543880:five_prime_UTR | 25.0% |
| ! | AAGCAAGATAAAAAACATCA+TGG | + | chr4_1:31250036-31250055 | None:intergenic | 25.0% |
| !!! | TGTTTTTTATCTTGCTTTGA+AGG | - | chr4_1:31250039-31250058 | Msa0543880:five_prime_UTR | 25.0% |
| ! | GAGAAATAAAAGGAAACAAA+AGG | + | chr4_1:31250137-31250156 | None:intergenic | 25.0% |
| ! | AAAACTGTGTGAGAAATAAA+AGG | + | chr4_1:31250147-31250166 | None:intergenic | 25.0% |
| !!! | TTTTATTTCTCACACAGTTT+TGG | - | chr4_1:31250146-31250165 | Msa0543880:five_prime_UTR | 25.0% |
| TGAAACTGTAAGGGTAATTT+GGG | + | chr4_1:31246302-31246321 | None:intergenic | 30.0% | |
| TTGAAACTGTAAGGGTAATT+TGG | + | chr4_1:31246303-31246322 | None:intergenic | 30.0% | |
| ! | TCGTAGTATTGAAACTGTAA+GGG | + | chr4_1:31246311-31246330 | None:intergenic | 30.0% |
| ! | TTCGTAGTATTGAAACTGTA+AGG | + | chr4_1:31246312-31246331 | None:intergenic | 30.0% |
| !! | AAGCTCCTTTTTCATTTTCA+TGG | - | chr4_1:31246344-31246363 | Msa0543880:intron | 30.0% |
| AACAAAAATGGAATGGAATG+GGG | + | chr4_1:31246406-31246425 | None:intergenic | 30.0% | |
| GAAACAAAAATGGAATGGAA+TGG | + | chr4_1:31246408-31246427 | None:intergenic | 30.0% | |
| ATATATGACTCTGAGCAAAA+TGG | + | chr4_1:31246449-31246468 | None:intergenic | 30.0% | |
| TCATTTGTGTGAAAAACAGA+CGG | + | chr4_1:31246773-31246792 | None:intergenic | 30.0% | |
| !! | TTCACTCAAAATTAGCTTGT+TGG | - | chr4_1:31246811-31246830 | Msa0543880:three_prime_UTR | 30.0% |
| !! | TCACTCAAAATTAGCTTGTT+GGG | - | chr4_1:31246812-31246831 | Msa0543880:three_prime_UTR | 30.0% |
| TTGTTGAAAAAATGTGTTGC+AGG | - | chr4_1:31247131-31247150 | Msa0543880:intron | 30.0% | |
| ACGTATATCCTATTGTATCT+GGG | - | chr4_1:31247242-31247261 | Msa0543880:intron | 30.0% | |
| !!! | TTGGTTTTATTTCAGTGTTC+TGG | - | chr4_1:31247729-31247748 | Msa0543880:intron | 30.0% |
| !!! | TGGTTTTATTTCAGTGTTCT+GGG | - | chr4_1:31247730-31247749 | Msa0543880:intron | 30.0% |
| CTGAATGAAATCATCAAACT+TGG | + | chr4_1:31247902-31247921 | None:intergenic | 30.0% | |
| !! | CTTTCTAGTTAGTGTATGTT+TGG | - | chr4_1:31247971-31247990 | Msa0543880:intron | 30.0% |
| CGTTCAAATTTGCATAAAGA+CGG | - | chr4_1:31248167-31248186 | Msa0543880:intron | 30.0% | |
| GTTCAAATTTGCATAAAGAC+GGG | - | chr4_1:31248168-31248187 | Msa0543880:intron | 30.0% | |
| ! | TAATCTTCATCTAAGGTTGT+AGG | - | chr4_1:31248337-31248356 | Msa0543880:intron | 30.0% |
| ! | TTATGGAATTGAACTCCTTT+TGG | + | chr4_1:31248426-31248445 | None:intergenic | 30.0% |
| !!! | TAGATTTTGTTGGCTTCTTA+TGG | + | chr4_1:31248443-31248462 | None:intergenic | 30.0% |
| ! | GTCTTACATGTAGATTTTGT+TGG | + | chr4_1:31248453-31248472 | None:intergenic | 30.0% |
| GTAACGTGTAAAGAAAATAG+GGG | + | chr4_1:31248695-31248714 | None:intergenic | 30.0% | |
| GGTAACGTGTAAAGAAAATA+GGG | + | chr4_1:31248696-31248715 | None:intergenic | 30.0% | |
| AGGTAACGTGTAAAGAAAAT+AGG | + | chr4_1:31248697-31248716 | None:intergenic | 30.0% | |
| ATTCTAATTGGAACACTATG+CGG | + | chr4_1:31248774-31248793 | None:intergenic | 30.0% | |
| CAAATTTGTGGTATATGCAT+GGG | + | chr4_1:31248836-31248855 | None:intergenic | 30.0% | |
| CTAAAAAAGGACCAAATTTG+TGG | + | chr4_1:31248848-31248867 | None:intergenic | 30.0% | |
| !! | ACTGCTTATAATGGATTATG+GGG | + | chr4_1:31249311-31249330 | None:intergenic | 30.0% |
| !! | GACTGCTTATAATGGATTAT+GGG | + | chr4_1:31249312-31249331 | None:intergenic | 30.0% |
| !! | TGACTGCTTATAATGGATTA+TGG | + | chr4_1:31249313-31249332 | None:intergenic | 30.0% |
| ! | TTTGATGATCATTGATCCTA+AGG | - | chr4_1:31249340-31249359 | Msa0543880:intron | 30.0% |
| TTGACTTAAACATCTCTACT+TGG | + | chr4_1:31249713-31249732 | None:intergenic | 30.0% | |
| AGTCAAAATATCATCACTCT+TGG | - | chr4_1:31249727-31249746 | Msa0543880:CDS | 30.0% | |
| GTCAAAATATCATCACTCTT+GGG | - | chr4_1:31249728-31249747 | Msa0543880:CDS | 30.0% | |
| TCAAAATATCATCACTCTTG+GGG | - | chr4_1:31249729-31249748 | Msa0543880:CDS | 30.0% | |
| GTATTGGACATCTTTAGATT+TGG | - | chr4_1:31250245-31250264 | Msa0543880:five_prime_UTR | 30.0% | |
| !! | ATGTTTCTGCTTTTACGCTT+CGG | + | chr4_1:31246250-31246269 | None:intergenic | 35.0% |
| GAAACTGTAAGGGTAATTTG+GGG | + | chr4_1:31246301-31246320 | None:intergenic | 35.0% | |
| CTCAGCCATGAAAATGAAAA+AGG | + | chr4_1:31246352-31246371 | None:intergenic | 35.0% | |
| TGTGTTCAATCTATGAAGCA+CGG | - | chr4_1:31246888-31246907 | Msa0543880:CDS | 35.0% | |
| !! | TATTAGTTGTGTCGGCTTAT+CGG | - | chr4_1:31247004-31247023 | Msa0543880:intron | 35.0% |
| TGTTGGAAATGAAAAAGAGC+AGG | - | chr4_1:31247161-31247180 | Msa0543880:intron | 35.0% | |
| GTTGGAAATGAAAAAGAGCA+GGG | - | chr4_1:31247162-31247181 | Msa0543880:intron | 35.0% | |
| CACGTATATCCTATTGTATC+TGG | - | chr4_1:31247241-31247260 | Msa0543880:intron | 35.0% | |
| TTGTACTTCCCAGATACAAT+AGG | + | chr4_1:31247253-31247272 | None:intergenic | 35.0% | |
| ! | TATTGTATCTGGGAAGTACA+AGG | - | chr4_1:31247252-31247271 | Msa0543880:intron | 35.0% |
| AAATTCAGAATGTGTGTAGC+CGG | - | chr4_1:31247458-31247477 | Msa0543880:intron | 35.0% | |
| CATCGATGGTAATTGGATAT+TGG | - | chr4_1:31247483-31247502 | Msa0543880:intron | 35.0% | |
| TAACTACATTAGTCCGATCT+CGG | + | chr4_1:31247510-31247529 | None:intergenic | 35.0% | |
| !! | TTTATTTCAGTGTTCTGGGA+TGG | - | chr4_1:31247734-31247753 | Msa0543880:intron | 35.0% |
| GTGTGATTGATTGTTGTAGA+CGG | - | chr4_1:31247855-31247874 | Msa0543880:intron | 35.0% | |
| TGGTCCATTGCATATCAATA+GGG | + | chr4_1:31247927-31247946 | None:intergenic | 35.0% | |
| ATGGTCCATTGCATATCAAT+AGG | + | chr4_1:31247928-31247947 | None:intergenic | 35.0% | |
| AAGATTGAAAATCCGTCTTG+AGG | - | chr4_1:31248055-31248074 | Msa0543880:intron | 35.0% | |
| GTCTCACATTGAATGAGATA+AGG | - | chr4_1:31248288-31248307 | Msa0543880:intron | 35.0% | |
| GAGGGTTTAATCTTCATCTA+AGG | - | chr4_1:31248330-31248349 | Msa0543880:intron | 35.0% | |
| TTCAGTTGCAATGTCAATTC+AGG | - | chr4_1:31248625-31248644 | Msa0543880:intron | 35.0% | |
| CAATGTCAATTCAGGTGAAA+GGG | - | chr4_1:31248633-31248652 | Msa0543880:intron | 35.0% | |
| AAGGGATTGATAGGATTCTT+AGG | - | chr4_1:31248651-31248670 | Msa0543880:intron | 35.0% | |
| ! | AGCAGGTGATTGATTCTAAT+TGG | + | chr4_1:31248786-31248805 | None:intergenic | 35.0% |
| CCAAATTTGTGGTATATGCA+TGG | + | chr4_1:31248837-31248856 | None:intergenic | 35.0% | |
| CCATGCATATACCACAAATT+TGG | - | chr4_1:31248834-31248853 | Msa0543880:intron | 35.0% | |
| ACATGCACATGCACTAAAAA+AGG | + | chr4_1:31248861-31248880 | None:intergenic | 35.0% | |
| ! | TTTTAGTGCATGTGCATGTT+TGG | - | chr4_1:31248862-31248881 | Msa0543880:intron | 35.0% |
| GTGAAATCCATTGACCAAAT+TGG | - | chr4_1:31249048-31249067 | Msa0543880:CDS | 35.0% | |
| TTATTAATGTGGTGAGTGTG+TGG | + | chr4_1:31249125-31249144 | None:intergenic | 35.0% | |
| GGATCAATGATCATCAAACA+TGG | + | chr4_1:31249338-31249357 | None:intergenic | 35.0% | |
| !! | TAAATGATTATGGGTTGGGT+AGG | + | chr4_1:31249374-31249393 | None:intergenic | 35.0% |
| TGCACTTGAAAAGAACAAAG+TGG | + | chr4_1:31249502-31249521 | None:intergenic | 35.0% | |
| GTGGAAAGGAATCTAAATGT+TGG | - | chr4_1:31249591-31249610 | Msa0543880:intron | 35.0% | |
| CTTAAACATCTCTACTTGGT+CGG | + | chr4_1:31249709-31249728 | None:intergenic | 35.0% | |
| ! | CATAGACATGTCATTTCCAA+TGG | - | chr4_1:31249770-31249789 | Msa0543880:CDS | 35.0% |
| CAATCATCACACAAAAAGTG+TGG | - | chr4_1:31249813-31249832 | Msa0543880:CDS | 35.0% | |
| ACAAAAGGAGAATCAGTACA+TGG | + | chr4_1:31250122-31250141 | None:intergenic | 35.0% | |
| GTTTATTTCAGCAGACACTT+TGG | + | chr4_1:31250184-31250203 | None:intergenic | 35.0% | |
| AAAATGGAATGGAATGGGGT+TGG | + | chr4_1:31246402-31246421 | None:intergenic | 40.0% | |
| CTGAGCAAAATGGAATGAAG+CGG | + | chr4_1:31246439-31246458 | None:intergenic | 40.0% | |
| TTGTTGGGTGATTGCCAAAT+TGG | - | chr4_1:31246827-31246846 | Msa0543880:three_prime_UTR | 40.0% | |
| CACATATACCAGACACAACA+CGG | + | chr4_1:31247041-31247060 | None:intergenic | 40.0% | |
| GTGTCTGGTATATGTGTTCA+AGG | - | chr4_1:31247045-31247064 | Msa0543880:intron | 40.0% | |
| GTGTTGCAGGTGAAATATGT+TGG | - | chr4_1:31247144-31247163 | Msa0543880:intron | 40.0% | |
| AAATGAAAAAGAGCAGGGAG+TGG | - | chr4_1:31247167-31247186 | Msa0543880:intron | 40.0% | |
| GAGGAAAGGACCAAATCAAA+TGG | - | chr4_1:31247194-31247213 | Msa0543880:intron | 40.0% | |
| ! | GACAAAACATTGGTTGTGAG+TGG | - | chr4_1:31247216-31247235 | Msa0543880:intron | 40.0% |
| CAAGTCGATGCACATTAAAC+AGG | - | chr4_1:31247427-31247446 | Msa0543880:intron | 40.0% | |
| ATTGGATATTGGACCGAGAT+CGG | - | chr4_1:31247494-31247513 | Msa0543880:intron | 40.0% | |
| GGTACAAAGAAGCAAGGAAA+TGG | - | chr4_1:31247755-31247774 | Msa0543880:intron | 40.0% | |
| AGAAGCAAGGAAATGGAATC+AGG | - | chr4_1:31247762-31247781 | Msa0543880:intron | 40.0% | |
| ATTGTTGTAGACGGCAATTC+CGG | - | chr4_1:31247864-31247883 | Msa0543880:intron | 40.0% | |
| AACTTGGTTCCTATCAACAC+CGG | + | chr4_1:31247886-31247905 | None:intergenic | 40.0% | |
| AGCTCCCTATTGATATGCAA+TGG | - | chr4_1:31247920-31247939 | Msa0543880:intron | 40.0% | |
| TCCTGATTTCACTGAAAACG+CGG | + | chr4_1:31248127-31248146 | None:intergenic | 40.0% | |
| CGTTTGTTTGAATTGGCGTT+AGG | + | chr4_1:31248205-31248224 | None:intergenic | 40.0% | |
| GATTCGGCGTTTGTTTGAAT+TGG | + | chr4_1:31248212-31248231 | None:intergenic | 40.0% | |
| GCAATGTCAATTCAGGTGAA+AGG | - | chr4_1:31248632-31248651 | Msa0543880:intron | 40.0% | |
| TTCAGGTGAAAGGGATTGAT+AGG | - | chr4_1:31248642-31248661 | Msa0543880:intron | 40.0% | |
| ATCACCTGCTAATAGCATAG+TGG | - | chr4_1:31248796-31248815 | Msa0543880:intron | 40.0% | |
| !! | ACATAGATGTCGATTTGCTC+TGG | - | chr4_1:31249091-31249110 | Msa0543880:CDS | 40.0% |
| ! | CATGGACTGACTGCTTATAA+TGG | + | chr4_1:31249320-31249339 | None:intergenic | 40.0% |
| ACAGGCAAGAACATATGCAA+AGG | - | chr4_1:31249467-31249486 | Msa0543880:intron | 40.0% | |
| CAAAACTCTTCGACTTACCT+TGG | - | chr4_1:31249565-31249584 | Msa0543880:intron | 40.0% | |
| !! | TGGTCGGTTGACTTACTTTT+TGG | + | chr4_1:31249693-31249712 | None:intergenic | 40.0% |
| GAGCTCGAAGAATACATCTC+CGG | + | chr4_1:31246619-31246638 | None:intergenic | 45.0% | |
| TTGCAGAGAAGTTTCGACAG+TGG | + | chr4_1:31246750-31246769 | None:intergenic | 45.0% | |
| ATCAGAAGACCAGCTTCCAA+TGG | - | chr4_1:31247362-31247381 | Msa0543880:intron | 45.0% | |
| ACTGAGTCCTTACATGCCAT+TGG | + | chr4_1:31247381-31247400 | None:intergenic | 45.0% | |
| AATGGCATGTAAGGACTCAG+TGG | - | chr4_1:31247380-31247399 | Msa0543880:intron | 45.0% | |
| TCCAATTACCATCGATGTGC+CGG | + | chr4_1:31247480-31247499 | None:intergenic | 45.0% | |
| ! | ATGTGCTGCTGGGTAATTGT+GGG | - | chr4_1:31247589-31247608 | Msa0543880:intron | 45.0% |
| TGGGATGGTACAAAGAAGCA+AGG | - | chr4_1:31247749-31247768 | Msa0543880:intron | 45.0% | |
| ! | TCCGCGTTTTCAGTGAAATC+AGG | - | chr4_1:31248123-31248142 | Msa0543880:intron | 45.0% |
| ATATGCATGGGATCCACAAG+TGG | + | chr4_1:31248824-31248843 | None:intergenic | 45.0% | |
| ACTTACCTTGGACAGTGGAA+AGG | - | chr4_1:31249577-31249596 | Msa0543880:intron | 45.0% | |
| AGATTCCTTTCCACTGTCCA+AGG | + | chr4_1:31249585-31249604 | None:intergenic | 45.0% | |
| GGAGAATCAGTACATGGCTA+AGG | + | chr4_1:31250116-31250135 | None:intergenic | 45.0% | |
| !!! | CTCACACAGTTTTGGAGTTG+TGG | - | chr4_1:31250154-31250173 | Msa0543880:five_prime_UTR | 45.0% |
| !! | AAATTAAAATCATATAAATA+TGG | - | chr4_1:31249284-31249303 | Msa0543880:CDS | 5.0% |
| TGGAATGGAATGGGGTTGGA+TGG | + | chr4_1:31246398-31246417 | None:intergenic | 50.0% | |
| ATCTCCGGAGCAACGATACA+CGG | + | chr4_1:31246604-31246623 | None:intergenic | 50.0% | |
| CTGTACGTAGCATTAGCACC+TGG | + | chr4_1:31246674-31246693 | None:intergenic | 50.0% | |
| ATTCAGCATTGCCATCTCCG+CGG | - | chr4_1:31246708-31246727 | Msa0543880:intron | 50.0% | |
| ATCGGGACACGACTAATCTG+AGG | + | chr4_1:31246919-31246938 | None:intergenic | 50.0% | |
| TGACACGACGTGTCTGACAT+CGG | + | chr4_1:31246937-31246956 | None:intergenic | 50.0% | |
| !! | GTGTCGGCTTATCGGCTTAT+CGG | - | chr4_1:31247012-31247031 | Msa0543880:intron | 50.0% |
| CCTTACATGCCATTGGAAGC+TGG | + | chr4_1:31247374-31247393 | None:intergenic | 50.0% | |
| CCAGCTTCCAATGGCATGTA+AGG | - | chr4_1:31247371-31247390 | Msa0543880:intron | 50.0% | |
| ATTACCCAGCAGCACATCAG+TGG | + | chr4_1:31247586-31247605 | None:intergenic | 50.0% | |
| ! | GATGTGCTGCTGGGTAATTG+TGG | - | chr4_1:31247588-31247607 | Msa0543880:intron | 50.0% |
| !! | ACGGCAATTCCGGTGTTGAT+AGG | - | chr4_1:31247874-31247893 | Msa0543880:intron | 50.0% |
| AGCGATTACCTCACTAGCGA+TGG | + | chr4_1:31247947-31247966 | None:intergenic | 50.0% | |
| GAAAATCCGTCTTGAGGCTG+TGG | - | chr4_1:31248061-31248080 | Msa0543880:intron | 50.0% | |
| !! | GTCGTGATTTTGACCTCACG+TGG | + | chr4_1:31248098-31248117 | None:intergenic | 50.0% |
| GGCACCACTATGCTATTAGC+AGG | + | chr4_1:31248803-31248822 | None:intergenic | 50.0% | |
| !! | TAGCATAGTGGTGCCACTTG+TGG | - | chr4_1:31248808-31248827 | Msa0543880:intron | 50.0% |
| GAATTCACGCATTCACGCAG+AGG | + | chr4_1:31249259-31249278 | None:intergenic | 50.0% | |
| GCGTGAATGCGTGAATTCAC+TGG | - | chr4_1:31249261-31249280 | Msa0543880:CDS | 50.0% | |
| TGGGTAGGCTTGTCTTCCTT+AGG | + | chr4_1:31249359-31249378 | None:intergenic | 50.0% | |
| CTTCGACTTACCTTGGACAG+TGG | - | chr4_1:31249572-31249591 | Msa0543880:intron | 50.0% | |
| ! | CTTGGGGCAATCGAGTTGTT+AGG | - | chr4_1:31249745-31249764 | Msa0543880:CDS | 50.0% |
| ACAGCCGTGTATCGTTGCTC+CGG | - | chr4_1:31246597-31246616 | Msa0543880:intron | 55.0% | |
| TTCAGCATTGCCATCTCCGC+GGG | - | chr4_1:31246709-31246728 | Msa0543880:intron | 55.0% | |
| GACACGACGTGTCTGACATC+GGG | + | chr4_1:31246936-31246955 | None:intergenic | 55.0% | |
| ! | ATCGGTGTCCGTGTTGTGTC+TGG | - | chr4_1:31247030-31247049 | Msa0543880:intron | 55.0% |
| AAGAGCAGGGAGTGGAACAG+AGG | - | chr4_1:31247175-31247194 | Msa0543880:intron | 55.0% | |
| CAGGGAGTGGAACAGAGGAA+AGG | - | chr4_1:31247180-31247199 | Msa0543880:intron | 55.0% | |
| GCCGGCACATCGATGGTAAT+TGG | - | chr4_1:31247476-31247495 | Msa0543880:intron | 55.0% | |
| AGCAGCACATCAGTGGCTGA+TGG | + | chr4_1:31247579-31247598 | None:intergenic | 55.0% | |
| ATCAGCCACTGATGTGCTGC+TGG | - | chr4_1:31247578-31247597 | Msa0543880:intron | 55.0% | |
| ! | TCAGCCACTGATGTGCTGCT+GGG | - | chr4_1:31247579-31247598 | Msa0543880:intron | 55.0% |
| GCAATGGACCATCGCTAGTG+AGG | - | chr4_1:31247936-31247955 | Msa0543880:intron | 55.0% | |
| AATCCGTCTTGAGGCTGTGG+CGG | - | chr4_1:31248064-31248083 | Msa0543880:intron | 55.0% | |
| TGCCTGAGCAGGCAAGCAGT+CGG | + | chr4_1:31246646-31246665 | None:intergenic | 60.0% | |
| GAATCCAACAGCGAAGCCCG+CGG | + | chr4_1:31246728-31246747 | None:intergenic | 60.0% | |
| GTGTGTAGCCGGCACATCGA+TGG | - | chr4_1:31247469-31247488 | Msa0543880:intron | 60.0% | |
| GTCACTCCTTCGCGCTGCGA+AGG | - | chr4_1:31246567-31246586 | Msa0543880:intron | 65.0% | |
| ACTCCTTCGCGCTGCGAAGG+AGG | - | chr4_1:31246570-31246589 | Msa0543880:intron | 65.0% | |
| AAGCCTCCTTCGCAGCGCGA+AGG | + | chr4_1:31246576-31246595 | None:intergenic | 65.0% | |
| ! | CACCGACTGCTTGCCTGCTC+AGG | - | chr4_1:31246641-31246660 | Msa0543880:intron | 65.0% |
| ACCTGGCTGCTTGCCTGAGC+AGG | + | chr4_1:31246657-31246676 | None:intergenic | 65.0% | |
| AACAGCGAAGCCCGCGGAGA+TGG | + | chr4_1:31246722-31246741 | None:intergenic | 65.0% | |
| ATCTCCGCGGGCTTCGCTGT+TGG | - | chr4_1:31246721-31246740 | Msa0543880:intron | 65.0% | |
| CCACCGCCACAGCCTCAAGA+CGG | + | chr4_1:31248070-31248089 | None:intergenic | 65.0% | |
| CGTCTTGAGGCTGTGGCGGT+GGG | - | chr4_1:31248068-31248087 | Msa0543880:intron | 65.0% | |
| GGCGGTGGGAATTCCACGTG+AGG | - | chr4_1:31248082-31248101 | Msa0543880:intron | 65.0% | |
| GCCTGCTCAGGCAAGCAGCC+AGG | - | chr4_1:31246653-31246672 | Msa0543880:intron | 70.0% | |
| CCGTCTTGAGGCTGTGGCGG+TGG | - | chr4_1:31248067-31248086 | Msa0543880:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 31246217 | 31250268 | 31246217 | ID=Msa0543880;Name=Msa0543880 |
| chr4_1 | mRNA | 31246217 | 31250268 | 31246217 | ID=Msa0543880-mRNA-1;Parent=Msa0543880;Name=Msa0543880-mRNA-1;_AED=0.20;_eAED=0.20;_QI=325|1|1|1|0.83|0.71|7|167|276 |
| chr4_1 | exon | 31246217 | 31246322 | 31246217 | ID=Msa0543880-mRNA-1:exon:8109;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31246789 | 31247014 | 31246789 | ID=Msa0543880-mRNA-1:exon:8108;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31248528 | 31248611 | 31248528 | ID=Msa0543880-mRNA-1:exon:8107;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31248702 | 31248741 | 31248702 | ID=Msa0543880-mRNA-1:exon:8106;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31249037 | 31249133 | 31249037 | ID=Msa0543880-mRNA-1:exon:8105;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31249212 | 31249332 | 31249212 | ID=Msa0543880-mRNA-1:exon:8104;Parent=Msa0543880-mRNA-1 |
| chr4_1 | exon | 31249620 | 31250268 | 31249620 | ID=Msa0543880-mRNA-1:exon:8103;Parent=Msa0543880-mRNA-1 |
| chr4_1 | five_prime_UTR | 31249944 | 31250268 | 31249944 | ID=Msa0543880-mRNA-1:five_prime_utr;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31249620 | 31249943 | 31249620 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31249212 | 31249332 | 31249212 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31249037 | 31249133 | 31249037 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31248702 | 31248741 | 31248702 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31248528 | 31248611 | 31248528 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | CDS | 31246850 | 31247014 | 31246850 | ID=Msa0543880-mRNA-1:cds;Parent=Msa0543880-mRNA-1 |
| chr4_1 | three_prime_UTR | 31246789 | 31246849 | 31246789 | ID=Msa0543880-mRNA-1:three_prime_utr;Parent=Msa0543880-mRNA-1 |
| chr4_1 | three_prime_UTR | 31246217 | 31246322 | 31246217 | ID=Msa0543880-mRNA-1:three_prime_utr;Parent=Msa0543880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
