Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543960 | XP_013455649.1 | 96.759 | 833 | 25 | 2 | 7 | 839 | 76 | 906 | 0.0 | 1677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543960 | sp|A9LLI8|RP6L3_ARATH | 59.160 | 857 | 254 | 14 | 12 | 840 | 84 | 872 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543960 | A0A072UUX2 | 96.759 | 833 | 25 | 2 | 7 | 839 | 76 | 906 | 0.0 | 1677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052260 | Msa0543960 | 0.810447 | 1.147392e-50 | -8.615850e-47 |
| Msa0543960 | Msa0569200 | 0.803348 | 3.638178e-49 | -8.615850e-47 |
| Msa0543960 | Msa1162150 | 0.803337 | 3.657917e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543960 | MtrunA17_Chr4g0024621 | 96.759 | 833 | 25 | 2 | 7 | 839 | 76 | 906 | 0.0 | 1677 |
| Msa0543960 | MtrunA17_Chr7g0253871 | 40.647 | 278 | 151 | 4 | 54 | 330 | 218 | 482 | 1.19e-55 | 204 |
| Msa0543960 | MtrunA17_Chr6g0460981 | 40.809 | 272 | 147 | 4 | 54 | 324 | 268 | 526 | 6.07e-54 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0543960 | AT2G32415.1 | 58.995 | 856 | 256 | 13 | 12 | 840 | 84 | 871 | 0.0 | 1002 |
| Msa0543960 | AT2G32415.2 | 58.947 | 855 | 256 | 13 | 12 | 839 | 84 | 870 | 0.0 | 1002 |
| Msa0543960 | AT2G32415.3 | 59.160 | 857 | 254 | 14 | 12 | 840 | 84 | 872 | 0.0 | 1001 |
| Msa0543960 | AT5G35910.1 | 44.030 | 268 | 136 | 5 | 54 | 320 | 269 | 523 | 1.18e-57 | 213 |
| Msa0543960 | AT1G54440.4 | 42.647 | 272 | 142 | 5 | 54 | 324 | 124 | 382 | 2.15e-56 | 202 |
| Msa0543960 | AT1G54440.5 | 43.609 | 266 | 136 | 5 | 54 | 318 | 124 | 376 | 5.49e-56 | 204 |
| Msa0543960 | AT1G54440.3 | 43.609 | 266 | 136 | 5 | 54 | 318 | 124 | 376 | 7.63e-56 | 203 |
| Msa0543960 | AT1G54440.2 | 43.609 | 266 | 136 | 5 | 54 | 318 | 124 | 376 | 1.40e-55 | 204 |
| Msa0543960 | AT1G54440.1 | 43.609 | 266 | 136 | 5 | 54 | 318 | 124 | 376 | 1.53e-55 | 203 |
Find 153 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAAGTAGCTTCTGAATT+TGG | 0.118842 | 4_1:-31507273 | Msa0543960:CDS |
| CAGCAAATTAGAATGGAATT+TGG | 0.221935 | 4_1:-31504601 | Msa0543960:CDS |
| CTCATCCTCTGGCCGGCCTT+TGG | 0.224821 | 4_1:+31507497 | None:intergenic |
| TAGATTATAAAGACATATTA+TGG | 0.224988 | 4_1:-31506658 | Msa0543960:CDS |
| TGTTGTATCTTCATCTTTGA+TGG | 0.225483 | 4_1:+31506204 | None:intergenic |
| CGCCGATCATGAGGCATTCT+TGG | 0.246292 | 4_1:+31507129 | None:intergenic |
| TCATCCTCTGGCCGGCCTTT+GGG | 0.260987 | 4_1:+31507498 | None:intergenic |
| CAAATTCCATTCTAATTTGC+TGG | 0.269442 | 4_1:+31504602 | None:intergenic |
| TCATTCGAAACTATCACTTT+TGG | 0.278629 | 4_1:-31506170 | Msa0543960:CDS |
| CAAGTTCAATTTCAGGTTGA+TGG | 0.279949 | 4_1:+31511206 | None:intergenic |
| TCAGCACCAAGTTCAATTTC+AGG | 0.284103 | 4_1:+31511199 | None:intergenic |
| GAATACAAATAAATTGTTAC+AGG | 0.286571 | 4_1:-31510276 | Msa0543960:intron |
| GAAAAGTAGCTTCTGAATTT+GGG | 0.293265 | 4_1:-31507272 | Msa0543960:CDS |
| AAATGAATGATTCATATGTT+TGG | 0.298711 | 4_1:-31511168 | Msa0543960:CDS |
| TCCTAGACAACATTCTAAAA+AGG | 0.318229 | 4_1:-31507791 | Msa0543960:CDS |
| CACAGCTTTAGAACACTTAG+AGG | 0.325839 | 4_1:-31504662 | Msa0543960:CDS |
| CAAAAGTGTCTAGGTCAAAA+TGG | 0.337300 | 4_1:-31507907 | Msa0543960:CDS |
| CTCCTGTTTATCACAATTGC+CGG | 0.338125 | 4_1:-31507729 | Msa0543960:CDS |
| AGTTGCTCTCCATGATTCTA+TGG | 0.341758 | 4_1:-31510888 | Msa0543960:CDS |
| ATGCACCTAGTATGAGTAAT+GGG | 0.345948 | 4_1:-31506480 | Msa0543960:CDS |
| ATTTGTATTCACACCACAAT+AGG | 0.347109 | 4_1:+31510289 | None:intergenic |
| AGACCAAGCAATTGTTGCTT+TGG | 0.350717 | 4_1:-31508118 | Msa0543960:CDS |
| GCAACAAACCTGAGTTTCAT+TGG | 0.355265 | 4_1:+31508959 | None:intergenic |
| TATATTTCAGAGTTACTTGC+TGG | 0.371156 | 4_1:+31508084 | None:intergenic |
| CAAAGGCCGGCCAGAGGATG+AGG | 0.379720 | 4_1:-31507496 | Msa0543960:CDS |
| GACTAGCCTCGAGAACAAAA+TGG | 0.394154 | 4_1:+31509102 | None:intergenic |
| ATCCGGCAATTGTGATAAAC+AGG | 0.396148 | 4_1:+31507727 | None:intergenic |
| GTTGATAAAGCTACTTCAAA+TGG | 0.397942 | 4_1:-31506343 | Msa0543960:CDS |
| GATCATTTACTGAAGGAGTA+TGG | 0.411763 | 4_1:-31506118 | Msa0543960:CDS |
| AGGCTTTACAGGGTTAGTTC+AGG | 0.411870 | 4_1:-31511047 | Msa0543960:intron |
| TGCTTCTGCAGTGCCATATG+AGG | 0.413649 | 4_1:-31506518 | Msa0543960:CDS |
| TCAGTATCATTCCCCTCATA+TGG | 0.414734 | 4_1:+31506505 | None:intergenic |
| TGGAGGAAGGGAGATATCTA+AGG | 0.416428 | 4_1:-31506638 | Msa0543960:CDS |
| TGAGATTCAGTTAATAGAAC+TGG | 0.421845 | 4_1:-31511137 | Msa0543960:CDS |
| TCTTCGTCGCTAACAACAAT+TGG | 0.423447 | 4_1:+31506229 | None:intergenic |
| TTCAATTTCCAATGAAACTC+AGG | 0.423802 | 4_1:-31508967 | Msa0543960:intron |
| GCAAGTTGGCATGACTCCTC+AGG | 0.430444 | 4_1:-31506596 | Msa0543960:CDS |
| TGAGTTTCATTGGAAATTGA+AGG | 0.431190 | 4_1:+31508969 | None:intergenic |
| GATAACAGACAAGATGATTC+GGG | 0.431288 | 4_1:-31506394 | Msa0543960:CDS |
| GCTCAATGAACTCAAACAAC+TGG | 0.431455 | 4_1:-31509497 | Msa0543960:CDS |
| AATGAATGATTCATATGTTT+GGG | 0.432587 | 4_1:-31511167 | Msa0543960:CDS |
| CTTGATTGTAGCGTGAAGAT+TGG | 0.437132 | 4_1:-31509600 | Msa0543960:intron |
| AGATAACAGACAAGATGATT+CGG | 0.439941 | 4_1:-31506395 | Msa0543960:CDS |
| AAGGTTGATAATACTCTTGA+CGG | 0.441550 | 4_1:-31506448 | Msa0543960:CDS |
| TAAGATAAAACAGTAGGTCT+CGG | 0.445508 | 4_1:+31507835 | None:intergenic |
| GGAATTCCAGCAAATTAGAA+TGG | 0.450785 | 4_1:-31504608 | Msa0543960:CDS |
| TGTTCGTAGGGTAATTCATC+CGG | 0.452962 | 4_1:-31507238 | Msa0543960:CDS |
| ACTGATGTCAATGCTGAAAC+GGG | 0.460151 | 4_1:-31508045 | Msa0543960:CDS |
| GTGAGGTGGCTGCAAACAAC+AGG | 0.461524 | 4_1:+31507994 | None:intergenic |
| TGCCGGATATTTGCTAATGA+CGG | 0.463918 | 4_1:-31507712 | Msa0543960:CDS |
| AAATCATTGCCCTCATCCTC+TGG | 0.463930 | 4_1:+31507486 | None:intergenic |
| CTGTGGCTCTTCTACGTCAC+GGG | 0.464858 | 4_1:-31507152 | Msa0543960:CDS |
| TCCGTTTGAAGCAGAGATTA+CGG | 0.467023 | 4_1:-31511242 | Msa0543960:CDS |
| AAATCTCAGCTCTCTAGAAC+AGG | 0.468509 | 4_1:-31504629 | Msa0543960:CDS |
| TTACATACTTTACATATTGA+AGG | 0.470004 | 4_1:+31510839 | None:intergenic |
| TCCCGTCATTAGCAAATATC+CGG | 0.473953 | 4_1:+31507710 | None:intergenic |
| GGATTCCTCTATATGTTCGT+AGG | 0.474805 | 4_1:-31507251 | Msa0543960:CDS |
| TGATATTGTCCTACTTTGTG+TGG | 0.475868 | 4_1:-31507337 | Msa0543960:CDS |
| ATTGACATCAGTCTGAACTA+TGG | 0.478911 | 4_1:+31508056 | None:intergenic |
| CATCAACCTGAAATTGAACT+TGG | 0.479964 | 4_1:-31511205 | Msa0543960:CDS |
| GGCTGCTTTGTTATTGTGAT+CGG | 0.480068 | 4_1:-31507687 | Msa0543960:CDS |
| CTGAAGGAGTATGGTGAAGA+TGG | 0.482619 | 4_1:-31506109 | Msa0543960:CDS |
| GCCGGATATTTGCTAATGAC+GGG | 0.483039 | 4_1:-31507711 | Msa0543960:CDS |
| TAAAGACATATTATGGAGGA+AGG | 0.483462 | 4_1:-31506651 | Msa0543960:CDS |
| GACTGATGTCAATGCTGAAA+CGG | 0.483557 | 4_1:-31508046 | Msa0543960:CDS |
| TGATTCGGGAAAGCCCTCTC+TGG | 0.484590 | 4_1:-31506380 | Msa0543960:CDS |
| ATTTGTTGATAGGTGTTCCA+TGG | 0.485803 | 4_1:-31510569 | Msa0543960:intron |
| GATACACCTCCCTCATCATT+CGG | 0.487173 | 4_1:+31507198 | None:intergenic |
| GGGCCGACAATGATGTTCTC+TGG | 0.491133 | 4_1:-31510547 | Msa0543960:CDS |
| GCGTCCTCTCTCAGCAGAAA+TGG | 0.491141 | 4_1:-31509572 | Msa0543960:CDS |
| AAAGGAGATTGAAGCTTCGC+CGG | 0.491348 | 4_1:-31509045 | Msa0543960:CDS |
| TTGCCAAAGCAACAATTGCT+TGG | 0.495556 | 4_1:+31508115 | None:intergenic |
| AAATGTATTCTGTAACATGA+TGG | 0.499766 | 4_1:+31507390 | None:intergenic |
| GCCGTAATCTCTGCTTCAAA+CGG | 0.500216 | 4_1:+31511241 | None:intergenic |
| CGAAGCTGCCCATGCTGCTG+CGG | 0.503372 | 4_1:-31507307 | Msa0543960:CDS |
| GTGATTCTTCAAAAGTGTCT+AGG | 0.505169 | 4_1:-31507916 | Msa0543960:CDS |
| AGAAAATTTGAGAAGAAGAG+AGG | 0.510365 | 4_1:-31506568 | Msa0543960:CDS |
| AAGGAGATTGAAGCTTCGCC+GGG | 0.514946 | 4_1:-31509044 | Msa0543960:CDS |
| TTCATTGGAAATTGAAGGAG+AGG | 0.520864 | 4_1:+31508974 | None:intergenic |
| AAGATAAAACAGTAGGTCTC+GGG | 0.520893 | 4_1:+31507836 | None:intergenic |
| ATAGATTAACAACGTATATG+TGG | 0.524039 | 4_1:+31510510 | None:intergenic |
| ATACTTCTCCGCAGCAGCAT+GGG | 0.524832 | 4_1:+31507299 | None:intergenic |
| GTGCACATGGAGAGATTTGA+TGG | 0.525112 | 4_1:-31508839 | Msa0543960:intron |
| TTTGTTGATAGGTGTTCCAT+GGG | 0.526683 | 4_1:-31510568 | Msa0543960:intron |
| AAGATGGAGACAAGTATTTG+TGG | 0.530280 | 4_1:-31506068 | Msa0543960:CDS |
| GCTGTGGCTCTTCTACGTCA+CGG | 0.530419 | 4_1:-31507153 | Msa0543960:CDS |
| AAAGGCCGGCCAGAGGATGA+GGG | 0.533590 | 4_1:-31507495 | Msa0543960:CDS |
| CATTCTGTTAAGACTGTCAT+CGG | 0.535620 | 4_1:+31506255 | None:intergenic |
| TAATCTATTTGATACTTCAA+AGG | 0.535943 | 4_1:-31510495 | Msa0543960:intron |
| TGCAAGATCAGAAGCCAGAG+AGG | 0.537122 | 4_1:+31506366 | None:intergenic |
| AACAAAATGGAATTTGTCAT+CGG | 0.538408 | 4_1:+31509115 | None:intergenic |
| TAGCCAGAGAACATCATTGT+CGG | 0.539599 | 4_1:+31510544 | None:intergenic |
| TGGCTGCAAACAACAGGAGA+TGG | 0.540414 | 4_1:+31508000 | None:intergenic |
| GAGTAATGGGGACACATTGA+AGG | 0.541494 | 4_1:-31506467 | Msa0543960:CDS |
| GTGTCCCCATTACTCATACT+AGG | 0.541822 | 4_1:+31506475 | None:intergenic |
| GTGATCGGAAGAAGCTTGAA+TGG | 0.543374 | 4_1:-31507672 | Msa0543960:intron |
| GGCCAAGAATGCCTCATGAT+CGG | 0.544294 | 4_1:-31507131 | Msa0543960:CDS |
| TACATACTTTACATATTGAA+GGG | 0.544604 | 4_1:+31510840 | None:intergenic |
| GTTCGTAGGGTAATTCATCC+GGG | 0.546795 | 4_1:-31507237 | Msa0543960:CDS |
| TCATCTGCTTGCAAACAAGT+TGG | 0.546891 | 4_1:-31507962 | Msa0543960:CDS |
| ATTACCCTACGAACATATAG+AGG | 0.549240 | 4_1:+31507246 | None:intergenic |
| AATGTATTCTGTAACATGAT+GGG | 0.556230 | 4_1:+31507391 | None:intergenic |
| TATACTTCTCCGCAGCAGCA+TGG | 0.562472 | 4_1:+31507298 | None:intergenic |
| ATATGTGTTGGATGTGGTGA+AGG | 0.564479 | 4_1:-31507441 | Msa0543960:CDS |
| CGTTTATAAGATAAAACAGT+AGG | 0.567833 | 4_1:+31507829 | None:intergenic |
| ACAAATGAAGAAACAAGAAG+TGG | 0.568864 | 4_1:-31506418 | Msa0543960:CDS |
| GCTTCTGCAGTGCCATATGA+GGG | 0.570009 | 4_1:-31506517 | Msa0543960:CDS |
| TATGCACCTAGTATGAGTAA+TGG | 0.570738 | 4_1:-31506481 | Msa0543960:CDS |
| GATTCCTCTATATGTTCGTA+GGG | 0.571939 | 4_1:-31507250 | Msa0543960:CDS |
| CGTGACAATCCACACAAAGT+AGG | 0.573758 | 4_1:+31507328 | None:intergenic |
| CAAACAACAGGAGATGGAGA+AGG | 0.583245 | 4_1:+31508006 | None:intergenic |
| GTATCATCTAAACATTCGAC+GGG | 0.583915 | 4_1:-31506544 | Msa0543960:CDS |
| TCGTGAGGCAGCTGTGCACA+TGG | 0.583978 | 4_1:-31508852 | Msa0543960:CDS |
| GAACATCATTGTCGGCCCCA+TGG | 0.586271 | 4_1:+31510552 | None:intergenic |
| GAAGAATTTCCATAGAATCA+TGG | 0.586889 | 4_1:+31510879 | None:intergenic |
| TATTTGCTAGAAACCTATTG+TGG | 0.593263 | 4_1:-31510302 | Msa0543960:CDS |
| AGTTCTTCACGCCGATCATG+AGG | 0.596604 | 4_1:+31507120 | None:intergenic |
| TACAGTTTCTGTCTATCGTG+AGG | 0.598321 | 4_1:-31508867 | Msa0543960:intron |
| GATAATGCAGCAGATTCTCC+CGG | 0.599666 | 4_1:+31509026 | None:intergenic |
| AGTATCATCTAAACATTCGA+CGG | 0.601098 | 4_1:-31506545 | Msa0543960:CDS |
| ACAATTACGATCAGCTGCTG+TGG | 0.603935 | 4_1:-31507169 | Msa0543960:CDS |
| ACTGGTTAATGTATTGAGCA+AGG | 0.604131 | 4_1:-31511119 | Msa0543960:CDS |
| TACAGTAGAAATGCATGCCG+CGG | 0.606886 | 4_1:-31504703 | Msa0543960:intron |
| AAAGACATATTATGGAGGAA+GGG | 0.609145 | 4_1:-31506650 | Msa0543960:CDS |
| TTATGTTCTGCAGGCGTGTG+AGG | 0.609346 | 4_1:-31510354 | Msa0543960:intron |
| AGTTGTAGATCATTTACTGA+AGG | 0.612138 | 4_1:-31506125 | Msa0543960:CDS |
| ATTATAAAGACATATTATGG+AGG | 0.613272 | 4_1:-31506655 | Msa0543960:CDS |
| AAACAACAGGAGATGGAGAA+GGG | 0.613997 | 4_1:+31508007 | None:intergenic |
| CATTGCCCTCATCCTCTGGC+CGG | 0.614627 | 4_1:+31507490 | None:intergenic |
| TGAACCCAAAGGCCGGCCAG+AGG | 0.618651 | 4_1:-31507502 | Msa0543960:CDS |
| ATGATGTTCTCTGGCTACAG+AGG | 0.626799 | 4_1:-31510538 | Msa0543960:CDS |
| AAAAGAAGCATTATAGCTGG+GGG | 0.627734 | 4_1:+31507525 | None:intergenic |
| TGTACCATTTCTGCTGAGAG+AGG | 0.631527 | 4_1:+31509568 | None:intergenic |
| GAACTCAAACAACTGGACAA+TGG | 0.632134 | 4_1:-31509490 | Msa0543960:intron |
| GCAGCTGATCGTAATTGTAA+CGG | 0.632892 | 4_1:+31507174 | None:intergenic |
| TGATGTTCTCTGGCTACAGA+GGG | 0.638339 | 4_1:-31510537 | Msa0543960:CDS |
| GCAAGATCAGAAGCCAGAGA+GGG | 0.642405 | 4_1:+31506367 | None:intergenic |
| GATGACAGATATCAGTGAGG+TGG | 0.653520 | 4_1:+31507980 | None:intergenic |
| GCAAACAAGTTGGTTAACCA+CGG | 0.657284 | 4_1:-31507952 | Msa0543960:CDS |
| GGACAATATCATGAGAGCGG+TGG | 0.668883 | 4_1:+31507349 | None:intergenic |
| TTGTCATGTTTGTAAAACCG+CGG | 0.669830 | 4_1:+31504686 | None:intergenic |
| GGATATTTGCTAATGACGGG+AGG | 0.670237 | 4_1:-31507708 | Msa0543960:CDS |
| CTTCTGCAGTGCCATATGAG+GGG | 0.672137 | 4_1:-31506516 | Msa0543960:CDS |
| TCTTGCAAAAGTTGTCGATG+AGG | 0.677552 | 4_1:-31507550 | Msa0543960:CDS |
| TTCGTAGGGTAATTCATCCG+GGG | 0.681408 | 4_1:-31507236 | Msa0543960:CDS |
| TCTACAACTTGTTTCCCATG+TGG | 0.683424 | 4_1:+31506139 | None:intergenic |
| TGCACCTAGTATGAGTAATG+GGG | 0.696880 | 4_1:-31506479 | Msa0543960:CDS |
| GGGGATGGGATGTAAAACAC+AGG | 0.700494 | 4_1:-31506018 | Msa0543960:intron |
| GTAGGACAATATCATGAGAG+CGG | 0.703306 | 4_1:+31507346 | None:intergenic |
| TCGGCGTGAAGAACTGACTG+AGG | 0.715204 | 4_1:-31507112 | Msa0543960:intron |
| TTGTTGATAGGTGTTCCATG+GGG | 0.750118 | 4_1:-31510567 | Msa0543960:intron |
| TCACAGAATAAATATCACCG+TGG | 0.784160 | 4_1:+31507935 | None:intergenic |
| GCAGATGACAGATATCAGTG+AGG | 0.789635 | 4_1:+31507977 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAACCTAATTTCTTTTAA+TGG | - | chr4_1:31505132-31505151 | Msa0543960:intron | 15.0% |
| !!! | TTAATGAAAAATTTGTTGAT+AGG | - | chr4_1:31505298-31505317 | Msa0543960:intron | 15.0% |
| !!! | TTATTTTGCAAATTATGATA+TGG | - | chr4_1:31507165-31507184 | Msa0543960:CDS | 15.0% |
| !! | CATTTATAAAAACATCAAAA+GGG | - | chr4_1:31508255-31508274 | Msa0543960:intron | 15.0% |
| !! | ATTTATAAAAACATCAAAAG+GGG | - | chr4_1:31508256-31508275 | Msa0543960:intron | 15.0% |
| !!! | CACATATATTTTTTTTACTT+TGG | + | chr4_1:31508423-31508442 | None:intergenic | 15.0% |
| !! | AGTAAAAAAAATATATGTGT+TGG | - | chr4_1:31508424-31508443 | Msa0543960:intron | 15.0% |
| !!! | GTAAACATTTTTAAAGATAA+AGG | - | chr4_1:31509064-31509083 | Msa0543960:CDS | 15.0% |
| !! | TAGATTATAAAGACATATTA+TGG | - | chr4_1:31509219-31509238 | Msa0543960:intron | 15.0% |
| !! | AAATTATGTAATCATTACTT+TGG | - | chr4_1:31510058-31510077 | Msa0543960:intron | 15.0% |
| !! | ATAGGTGATATTAAATAAAA+GGG | + | chr4_1:31510166-31510185 | None:intergenic | 15.0% |
| !! | AATAGGTGATATTAAATAAA+AGG | + | chr4_1:31510167-31510186 | None:intergenic | 15.0% |
| !!! | ACCTATTTATCTTTTTTATA+AGG | - | chr4_1:31510180-31510199 | Msa0543960:intron | 15.0% |
| !! | TAGTAAAATGAGAAAATTAT+GGG | + | chr4_1:31510500-31510519 | None:intergenic | 15.0% |
| !! | TTAGTAAAATGAGAAAATTA+TGG | + | chr4_1:31510501-31510520 | None:intergenic | 15.0% |
| !!! | TTTCTTTAAAAAAAAGTACA+AGG | + | chr4_1:31510979-31510998 | None:intergenic | 15.0% |
| !! | AAATGAATGATTCATATGTT+TGG | - | chr4_1:31504709-31504728 | Msa0543960:intron | 20.0% |
| !! | AATGAATGATTCATATGTTT+GGG | - | chr4_1:31504710-31504729 | Msa0543960:intron | 20.0% |
| !! | AACTATCAAAAATAAGTTGT+TGG | + | chr4_1:31504897-31504916 | None:intergenic | 20.0% |
| !! | TACATACTTTACATATTGAA+GGG | + | chr4_1:31505040-31505059 | None:intergenic | 20.0% |
| !! | TTACATACTTTACATATTGA+AGG | + | chr4_1:31505041-31505060 | None:intergenic | 20.0% |
| !! | AAAAAAGACAATTTCGAAAT+CGG | + | chr4_1:31505114-31505133 | None:intergenic | 20.0% |
| !! | TAACTCCATTAAAAGAAATT+AGG | + | chr4_1:31505140-31505159 | None:intergenic | 20.0% |
| !! | GCTTTAATTCAATTAATATG+TGG | + | chr4_1:31505206-31505225 | None:intergenic | 20.0% |
| !! | TAATCTATTTGATACTTCAA+AGG | - | chr4_1:31505382-31505401 | Msa0543960:intron | 20.0% |
| !! | GAATACAAATAAATTGTTAC+AGG | - | chr4_1:31505601-31505620 | Msa0543960:intron | 20.0% |
| !!! | GCAATTTTAACTTGTAATAA+AGG | - | chr4_1:31505931-31505950 | Msa0543960:intron | 20.0% |
| !!! | TAACTTGTAATAAAGGATTT+CGG | - | chr4_1:31505938-31505957 | Msa0543960:intron | 20.0% |
| !!! | ACAGAAATTTTTGTTTCTAT+TGG | + | chr4_1:31506448-31506467 | None:intergenic | 20.0% |
| !!! | TTTTACACAAAATAAACCTT+TGG | - | chr4_1:31507272-31507291 | Msa0543960:CDS | 20.0% |
| !! | TTTACACAAAATAAACCTTT+GGG | - | chr4_1:31507273-31507292 | Msa0543960:CDS | 20.0% |
| !!! | TTATTTAAGACCATAATTAC+AGG | + | chr4_1:31507307-31507326 | None:intergenic | 20.0% |
| !!! | GTAATTATGGTCTTAAATAA+AGG | - | chr4_1:31507307-31507326 | Msa0543960:CDS | 20.0% |
| !! | AATGTCAAGTACTTAAAAAT+TGG | + | chr4_1:31507423-31507442 | None:intergenic | 20.0% |
| !!! | CATTTTTAATTATGCTTTGT+TGG | - | chr4_1:31508008-31508027 | Msa0543960:CDS | 20.0% |
| !! | TTTATAAATGGAATAAGAAC+AGG | + | chr4_1:31508245-31508264 | None:intergenic | 20.0% |
| !!! | CCTTTTGATGTTTTTATAAA+TGG | + | chr4_1:31508257-31508276 | None:intergenic | 20.0% |
| !! | CCATTTATAAAAACATCAAA+AGG | - | chr4_1:31508254-31508273 | Msa0543960:intron | 20.0% |
| !!! | ATGTATCACATTAATTTTGA+TGG | + | chr4_1:31508890-31508909 | None:intergenic | 20.0% |
| !! | TACACAAGTTCATAAAAAAA+AGG | - | chr4_1:31509014-31509033 | Msa0543960:CDS | 20.0% |
| !!! | CTTTAACTTAAGTTTCAAAT+AGG | + | chr4_1:31509120-31509139 | None:intergenic | 20.0% |
| !!! | CTATTTGAAACTTAAGTTAA+AGG | - | chr4_1:31509118-31509137 | Msa0543960:CDS | 20.0% |
| !! | ATTATAAAGACATATTATGG+AGG | - | chr4_1:31509222-31509241 | Msa0543960:intron | 20.0% |
| !! | GCTTAATAAGTATTTATTCA+AGG | - | chr4_1:31509968-31509987 | Msa0543960:intron | 20.0% |
| !! | GCCTTATAAAAAAGATAAAT+AGG | + | chr4_1:31510184-31510203 | None:intergenic | 20.0% |
| !!! | CATATTTTAATCAGTTATGT+AGG | - | chr4_1:31510203-31510222 | Msa0543960:intron | 20.0% |
| !! | TTGCAAAAGATATTAACATT+AGG | - | chr4_1:31510301-31510320 | Msa0543960:CDS | 20.0% |
| !! | AAAAATATCAGTAAGTTATC+AGG | - | chr4_1:31510356-31510375 | Msa0543960:intron | 20.0% |
| !! | AAAATATCAGTAAGTTATCA+GGG | - | chr4_1:31510357-31510376 | Msa0543960:intron | 20.0% |
| !! | AAAATTAACCAAATTGTTGA+CGG | + | chr4_1:31511041-31511060 | None:intergenic | 20.0% |
| !!! | TAAGAATGTCATCATTTTTA+CGG | + | chr4_1:31511148-31511167 | None:intergenic | 20.0% |
| !!! | TTCTGATTCTTTTGAGTTTT+TGG | - | chr4_1:31505166-31505185 | Msa0543960:intron | 25.0% |
| ! | ATAGATTAACAACGTATATG+TGG | + | chr4_1:31505370-31505389 | None:intergenic | 25.0% |
| !! | AAATAAGCAAGTGATTTTTG+TGG | + | chr4_1:31505560-31505579 | None:intergenic | 25.0% |
| ! | CAAATAAATTGTTACAGGTT+TGG | - | chr4_1:31505606-31505625 | Msa0543960:intron | 25.0% |
| ! | TACATGAGTATGAAAAACAT+GGG | + | chr4_1:31505714-31505733 | None:intergenic | 25.0% |
| ! | TTACATGAGTATGAAAAACA+TGG | + | chr4_1:31505715-31505734 | None:intergenic | 25.0% |
| !! | TTGAAGTACTAATTCAGTTT+AGG | + | chr4_1:31505755-31505774 | None:intergenic | 25.0% |
| ! | TTGAGTTTATTGAACTAATG+AGG | - | chr4_1:31505977-31505996 | Msa0543960:intron | 25.0% |
| ! | TGAGTTTATTGAACTAATGA+GGG | - | chr4_1:31505978-31505997 | Msa0543960:intron | 25.0% |
| ! | ACTGTTTATTGAACTAAACA+GGG | - | chr4_1:31506053-31506072 | Msa0543960:CDS | 25.0% |
| !! | ATTGCACTCTTTTAAATATG+TGG | - | chr4_1:31506159-31506178 | Msa0543960:CDS | 25.0% |
| !! | AAGGTAGATATTAAAAGTGT+TGG | + | chr4_1:31506496-31506515 | None:intergenic | 25.0% |
| ! | ATCATTCTTTGTTAATATGC+TGG | - | chr4_1:31506697-31506716 | Msa0543960:intron | 25.0% |
| ! | TCATTCTTTGTTAATATGCT+GGG | - | chr4_1:31506698-31506717 | Msa0543960:intron | 25.0% |
| ! | AACAAAATGGAATTTGTCAT+CGG | + | chr4_1:31506765-31506784 | None:intergenic | 25.0% |
| ! | TGCAAAATAACATGTTAAAG+TGG | + | chr4_1:31507155-31507174 | None:intergenic | 25.0% |
| ! | TGCAAATTATGATATGGAAT+AGG | - | chr4_1:31507171-31507190 | Msa0543960:CDS | 25.0% |
| ! | GGAAATAAAACCTGTAATTA+TGG | - | chr4_1:31507294-31507313 | Msa0543960:CDS | 25.0% |
| ! | TTCTATTGCTATAAACTTGA+TGG | + | chr4_1:31507470-31507489 | None:intergenic | 25.0% |
| !!! | CTTAGTTTTGCATATTCTTT+TGG | + | chr4_1:31507531-31507550 | None:intergenic | 25.0% |
| ! | CGTTTATAAGATAAAACAGT+AGG | + | chr4_1:31508051-31508070 | None:intergenic | 25.0% |
| ! | AAAAATATATGTGTTGGATG+TGG | - | chr4_1:31508430-31508449 | Msa0543960:intron | 25.0% |
| ! | AATGTATTCTGTAACATGAT+GGG | + | chr4_1:31508489-31508508 | None:intergenic | 25.0% |
| ! | AAATGTATTCTGTAACATGA+TGG | + | chr4_1:31508490-31508509 | None:intergenic | 25.0% |
| !!! | ATCTGTAGTTTTAACAAAGA+TGG | + | chr4_1:31509565-31509584 | None:intergenic | 25.0% |
| !!! | CATTTTTAGTTGAGAGAAAA+CGG | + | chr4_1:31509925-31509944 | None:intergenic | 25.0% |
| !!! | ACATGTTTTGAAGAATTAAG+AGG | - | chr4_1:31510249-31510268 | Msa0543960:intron | 25.0% |
| ! | TGTACATGTTGAATTATTCA+TGG | - | chr4_1:31510458-31510477 | Msa0543960:intron | 25.0% |
| !! | CTATCAATTACTTTAGAAAC+CGG | + | chr4_1:31510562-31510581 | None:intergenic | 25.0% |
| ! | TGACGGAATTATCAAAATAA+AGG | + | chr4_1:31511024-31511043 | None:intergenic | 25.0% |
| !!! | AGTCAAGTGTTTTTTTCTAC+AGG | - | chr4_1:31504594-31504613 | Msa0543960:CDS | 30.0% |
| !!! | GTGTTTTTTTCTACAGGAAA+TGG | - | chr4_1:31504600-31504619 | Msa0543960:CDS | 30.0% |
| TGAGATTCAGTTAATAGAAC+TGG | - | chr4_1:31504740-31504759 | Msa0543960:intron | 30.0% | |
| TTGAGCAAGGAAAAATTCTT+TGG | - | chr4_1:31504771-31504790 | Msa0543960:intron | 30.0% | |
| !!! | GTTCTTTTTTAGGCTTTACA+GGG | - | chr4_1:31504820-31504839 | Msa0543960:intron | 30.0% |
| GAAGAATTTCCATAGAATCA+TGG | + | chr4_1:31505001-31505020 | None:intergenic | 30.0% | |
| !!! | TCATTGTCATGTTTTTTCCA+AGG | - | chr4_1:31505065-31505084 | Msa0543960:intron | 30.0% |
| !!! | CATTGTCATGTTTTTTCCAA+GGG | - | chr4_1:31505066-31505085 | Msa0543960:intron | 30.0% |
| !!! | ATTGTCATGTTTTTTCCAAG+GGG | - | chr4_1:31505067-31505086 | Msa0543960:intron | 30.0% |
| AAAAACCTGAAGCATAAAGT+TGG | + | chr4_1:31505278-31505297 | None:intergenic | 30.0% | |
| TGTATGGTACAATGTAAATG+AGG | + | chr4_1:31505423-31505442 | None:intergenic | 30.0% | |
| AATAAGAAGTTGCTAGTCAA+TGG | + | chr4_1:31505492-31505511 | None:intergenic | 30.0% | |
| ! | TATTTGCTAGAAACCTATTG+TGG | - | chr4_1:31505575-31505594 | Msa0543960:intron | 30.0% |
| ATTTGTATTCACACCACAAT+AGG | + | chr4_1:31505591-31505610 | None:intergenic | 30.0% | |
| AAAAGTTTGTCAAAGAGAGT+TGG | + | chr4_1:31505832-31505851 | None:intergenic | 30.0% | |
| GAGTTTATTGAACTAATGAG+GGG | - | chr4_1:31505979-31505998 | Msa0543960:intron | 30.0% | |
| AGTTTATTGAACTAATGAGG+GGG | - | chr4_1:31505980-31505999 | Msa0543960:intron | 30.0% | |
| CACTGTTTATTGAACTAAAC+AGG | - | chr4_1:31506052-31506071 | Msa0543960:CDS | 30.0% | |
| AATCACAACATCAGTTAAGA+AGG | + | chr4_1:31506417-31506436 | None:intergenic | 30.0% | |
| ACTGATGTTGTGATTAAAGA+TGG | - | chr4_1:31506422-31506441 | Msa0543960:CDS | 30.0% | |
| GTCAAAATGACAAAATGCTT+GGG | + | chr4_1:31506621-31506640 | None:intergenic | 30.0% | |
| TGTCAAAATGACAAAATGCT+TGG | + | chr4_1:31506622-31506641 | None:intergenic | 30.0% | |
| !!! | AAGCATTTTGTCATTTTGAC+AGG | - | chr4_1:31506621-31506640 | Msa0543960:CDS | 30.0% |
| ! | TTGTTTGCAACTTTTCACAA+AGG | - | chr4_1:31506814-31506833 | Msa0543960:intron | 30.0% |
| TGAGTTTCATTGGAAATTGA+AGG | + | chr4_1:31506911-31506930 | None:intergenic | 30.0% | |
| TTCAATTTCCAATGAAACTC+AGG | - | chr4_1:31506910-31506929 | Msa0543960:intron | 30.0% | |
| GTAACAAAACTGTTCTTTAG+TGG | + | chr4_1:31507097-31507116 | None:intergenic | 30.0% | |
| !!! | TTACAGGTTTTATTTCCCAA+AGG | + | chr4_1:31507291-31507310 | None:intergenic | 30.0% |
| CACATCAAAATTTGTACATC+AGG | + | chr4_1:31507615-31507634 | None:intergenic | 30.0% | |
| !! | CTGATGTACAAATTTTGATG+TGG | - | chr4_1:31507613-31507632 | Msa0543960:intron | 30.0% |
| TATATTTCAGAGTTACTTGC+TGG | + | chr4_1:31507796-31507815 | None:intergenic | 30.0% | |
| TAAGATAAAACAGTAGGTCT+CGG | + | chr4_1:31508045-31508064 | None:intergenic | 30.0% | |
| !! | AATGTTGTCTAGGATTTTTC+AGG | + | chr4_1:31508080-31508099 | None:intergenic | 30.0% |
| ! | TCCTAGACAACATTCTAAAA+AGG | - | chr4_1:31508086-31508105 | Msa0543960:CDS | 30.0% |
| TGATAAATGTTCATTTCTCC+AGG | - | chr4_1:31508290-31508309 | Msa0543960:intron | 30.0% | |
| !! | AAAAAGAAGCATTATAGCTG+GGG | + | chr4_1:31508356-31508375 | None:intergenic | 30.0% |
| !! | CAAAAAGAAGCATTATAGCT+GGG | + | chr4_1:31508357-31508376 | None:intergenic | 30.0% |
| !! | TCAAAAAGAAGCATTATAGC+TGG | + | chr4_1:31508358-31508377 | None:intergenic | 30.0% |
| AGAAAAGTAGCTTCTGAATT+TGG | - | chr4_1:31508604-31508623 | Msa0543960:intron | 30.0% | |
| GAAAAGTAGCTTCTGAATTT+GGG | - | chr4_1:31508605-31508624 | Msa0543960:intron | 30.0% | |
| AAAAACCAACCTTGATTCAA+CGG | - | chr4_1:31509040-31509059 | Msa0543960:CDS | 30.0% | |
| TTATTGTTATCTACTGCTAC+TGG | - | chr4_1:31509165-31509184 | Msa0543960:intron | 30.0% | |
| TAAAGACATATTATGGAGGA+AGG | - | chr4_1:31509226-31509245 | Msa0543960:intron | 30.0% | |
| AAAGACATATTATGGAGGAA+GGG | - | chr4_1:31509227-31509246 | Msa0543960:intron | 30.0% | |
| AGAAAATTTGAGAAGAAGAG+AGG | - | chr4_1:31509309-31509328 | Msa0543960:intron | 30.0% | |
| AGTATCATCTAAACATTCGA+CGG | - | chr4_1:31509332-31509351 | Msa0543960:intron | 30.0% | |
| !! | AAGGTTGATAATACTCTTGA+CGG | - | chr4_1:31509429-31509448 | Msa0543960:intron | 30.0% |
| ACAAATGAAGAAACAAGAAG+TGG | - | chr4_1:31509459-31509478 | Msa0543960:intron | 30.0% | |
| AGATAACAGACAAGATGATT+CGG | - | chr4_1:31509482-31509501 | Msa0543960:intron | 30.0% | |
| ! | GTTGATAAAGCTACTTCAAA+TGG | - | chr4_1:31509534-31509553 | Msa0543960:CDS | 30.0% |
| TGTTGTATCTTCATCTTTGA+TGG | + | chr4_1:31509676-31509695 | None:intergenic | 30.0% | |
| ! | TCATTCGAAACTATCACTTT+TGG | - | chr4_1:31509707-31509726 | Msa0543960:intron | 30.0% |
| !! | CATTCGAAACTATCACTTTT+GGG | - | chr4_1:31509708-31509727 | Msa0543960:intron | 30.0% |
| AGTTGTAGATCATTTACTGA+AGG | - | chr4_1:31509752-31509771 | Msa0543960:intron | 30.0% | |
| !! | TTAGAGAGTTTTGTCAAAGA+TGG | - | chr4_1:31509793-31509812 | Msa0543960:intron | 30.0% |
| ! | CGTTTTCTCTCAACTAAAAA+TGG | - | chr4_1:31509923-31509942 | Msa0543960:intron | 30.0% |
| AATTATTACTCCTTTCTTCG+AGG | - | chr4_1:31510781-31510800 | Msa0543960:intron | 30.0% | |
| AAAATCAAATCCTCGAAGAA+AGG | + | chr4_1:31510794-31510813 | None:intergenic | 30.0% | |
| !! | TTTCTTCGAGGATTTGATTT+TGG | - | chr4_1:31510793-31510812 | Msa0543960:intron | 30.0% |
| ! | AGAAAATTCGATAGCATTGA+AGG | + | chr4_1:31510943-31510962 | None:intergenic | 30.0% |
| GGAATTATCAAAATAAAGGC+GGG | + | chr4_1:31511020-31511039 | None:intergenic | 30.0% | |
| CGGAATTATCAAAATAAAGG+CGG | + | chr4_1:31511021-31511040 | None:intergenic | 30.0% | |
| TGATAATTCCGTCAACAATT+TGG | - | chr4_1:31511030-31511049 | Msa0543960:intron | 30.0% | |
| ! | CAAATTCCATTCTAATTTGC+TGG | + | chr4_1:31511278-31511297 | None:intergenic | 30.0% |
| CAGCAAATTAGAATGGAATT+TGG | - | chr4_1:31511276-31511295 | Msa0543960:CDS | 30.0% | |
| !!! | AGGTTGATGGTTTTGTAACA+AGG | + | chr4_1:31504661-31504680 | None:intergenic | 35.0% |
| !! | CAAGTTCAATTTCAGGTTGA+TGG | + | chr4_1:31504674-31504693 | None:intergenic | 35.0% |
| CATCAACCTGAAATTGAACT+TGG | - | chr4_1:31504672-31504691 | Msa0543960:CDS | 35.0% | |
| ACTGGTTAATGTATTGAGCA+AGG | - | chr4_1:31504758-31504777 | Msa0543960:intron | 35.0% | |
| CAAGGAAAAATTCTTTGGTG+TGG | - | chr4_1:31504776-31504795 | Msa0543960:intron | 35.0% | |
| !!! | CATAGCTTGCGTTCTTTTTT+AGG | - | chr4_1:31504810-31504829 | Msa0543960:intron | 35.0% |
| !!! | CGTTCTTTTTTAGGCTTTAC+AGG | - | chr4_1:31504819-31504838 | Msa0543960:intron | 35.0% |
| !!! | ATGTTTTTTCCAAGGGGAAT+GGG | - | chr4_1:31505073-31505092 | Msa0543960:intron | 35.0% |
| ! | ATTTGTTGATAGGTGTTCCA+TGG | - | chr4_1:31505308-31505327 | Msa0543960:intron | 35.0% |
| ! | TTTGTTGATAGGTGTTCCAT+GGG | - | chr4_1:31505309-31505328 | Msa0543960:intron | 35.0% |
| ! | GCATGAGGAGAAATTTTGTA+TGG | + | chr4_1:31505439-31505458 | None:intergenic | 35.0% |
| TACACTCATTATCATGCATG+AGG | + | chr4_1:31505454-31505473 | None:intergenic | 35.0% | |
| GCAGGAAATCAAGCATAATT+GGG | + | chr4_1:31505632-31505651 | None:intergenic | 35.0% | |
| TGCAGGAAATCAAGCATAAT+TGG | + | chr4_1:31505633-31505652 | None:intergenic | 35.0% | |
| GTTTATTGAACTAATGAGGG+GGG | - | chr4_1:31505981-31506000 | Msa0543960:intron | 35.0% | |
| ! | CAAATTCCATTTTGTTCTCG+AGG | - | chr4_1:31506769-31506788 | Msa0543960:intron | 35.0% |
| TTCATTGGAAATTGAAGGAG+AGG | + | chr4_1:31506906-31506925 | None:intergenic | 35.0% | |
| ! | TTGTTGCTTCAATGTCGATT+TGG | - | chr4_1:31506934-31506953 | Msa0543960:intron | 35.0% |
| CTAGTAGTGAGTGATCTAAT+TGG | - | chr4_1:31506961-31506980 | Msa0543960:intron | 35.0% | |
| TTAAAGTGGTCTACAACTCA+AGG | + | chr4_1:31507141-31507160 | None:intergenic | 35.0% | |
| CTACATGTTCACAGTCAATT+GGG | - | chr4_1:31507205-31507224 | Msa0543960:CDS | 35.0% | |
| ATTGACATCAGTCTGAACTA+TGG | + | chr4_1:31507824-31507843 | None:intergenic | 35.0% | |
| TCACAGAATAAATATCACCG+TGG | + | chr4_1:31507945-31507964 | None:intergenic | 35.0% | |
| !! | GTGATTCTTCAAAAGTGTCT+AGG | - | chr4_1:31507961-31507980 | Msa0543960:CDS | 35.0% |
| !! | CAAAAGTGTCTAGGTCAAAA+TGG | - | chr4_1:31507970-31507989 | Msa0543960:CDS | 35.0% |
| AAGATAAAACAGTAGGTCTC+GGG | + | chr4_1:31508044-31508063 | None:intergenic | 35.0% | |
| !!! | GCCTTTTTAGAATGTTGTCT+AGG | + | chr4_1:31508090-31508109 | None:intergenic | 35.0% |
| !! | AAAAGAAGCATTATAGCTGG+GGG | + | chr4_1:31508355-31508374 | None:intergenic | 35.0% |
| ! | ATGCTTCTTTTTGAACCCAA+AGG | - | chr4_1:31508364-31508383 | Msa0543960:intron | 35.0% |
| TGATATTGTCCTACTTTGTG+TGG | - | chr4_1:31508540-31508559 | Msa0543960:intron | 35.0% | |
| GATTCCTCTATATGTTCGTA+GGG | - | chr4_1:31508627-31508646 | Msa0543960:intron | 35.0% | |
| ATTACCCTACGAACATATAG+AGG | + | chr4_1:31508634-31508653 | None:intergenic | 35.0% | |
| ACTGAAAAACCGAATGATGA+GGG | - | chr4_1:31508670-31508689 | Msa0543960:intron | 35.0% | |
| ! | CAAGTTGACTATCATCAGAA+GGG | + | chr4_1:31508846-31508865 | None:intergenic | 35.0% |
| !! | TCAAGTTGACTATCATCAGA+AGG | + | chr4_1:31508847-31508866 | None:intergenic | 35.0% |
| AACTCTCGTTGAGAATAACA+GGG | + | chr4_1:31508937-31508956 | None:intergenic | 35.0% | |
| AAACTCTCGTTGAGAATAAC+AGG | + | chr4_1:31508938-31508957 | None:intergenic | 35.0% | |
| TCTCAACGAGAGTTTAATTG+TGG | - | chr4_1:31508943-31508962 | Msa0543960:intron | 35.0% | |
| ATGTTTACACCGTTGAATCA+AGG | + | chr4_1:31509052-31509071 | None:intergenic | 35.0% | |
| GCAACAAAAAACTGAATCAG+AGG | + | chr4_1:31509145-31509164 | None:intergenic | 35.0% | |
| CTAGAAAAAGCTTTGCAAGT+TGG | - | chr4_1:31509267-31509286 | Msa0543960:intron | 35.0% | |
| ! | TCAAATTTTCTTCTCTCCTG+AGG | + | chr4_1:31509300-31509319 | None:intergenic | 35.0% |
| GTATCATCTAAACATTCGAC+GGG | - | chr4_1:31509333-31509352 | Msa0543960:intron | 35.0% | |
| TATGCACCTAGTATGAGTAA+TGG | - | chr4_1:31509396-31509415 | Msa0543960:intron | 35.0% | |
| ATGCACCTAGTATGAGTAAT+GGG | - | chr4_1:31509397-31509416 | Msa0543960:intron | 35.0% | |
| GATAACAGACAAGATGATTC+GGG | - | chr4_1:31509483-31509502 | Msa0543960:intron | 35.0% | |
| CATTCTGTTAAGACTGTCAT+CGG | + | chr4_1:31509625-31509644 | None:intergenic | 35.0% | |
| !!! | AAACTATCACTTTTGGGACA+TGG | - | chr4_1:31509714-31509733 | Msa0543960:intron | 35.0% |
| GATCATTTACTGAAGGAGTA+TGG | - | chr4_1:31509759-31509778 | Msa0543960:intron | 35.0% | |
| AAGATGGAGACAAGTATTTG+TGG | - | chr4_1:31509809-31509828 | Msa0543960:intron | 35.0% | |
| ! | TAAAACCGTGTTTTCTTCCT+GGG | - | chr4_1:31509838-31509857 | Msa0543960:intron | 35.0% |
| CTTGACTCTAAATGCTCTTA+GGG | + | chr4_1:31510017-31510036 | None:intergenic | 35.0% | |
| TCTTGACTCTAAATGCTCTT+AGG | + | chr4_1:31510018-31510037 | None:intergenic | 35.0% | |
| !! | TAAGAGCATTTAGAGTCAAG+AGG | - | chr4_1:31510017-31510036 | Msa0543960:intron | 35.0% |
| TTCTTTACGGACTCTATAAG+AGG | + | chr4_1:31510117-31510136 | None:intergenic | 35.0% | |
| TGTCCTAAGGACATTCTTTA+CGG | + | chr4_1:31510130-31510149 | None:intergenic | 35.0% | |
| TCAGTAAGTTATCAGGGATA+AGG | - | chr4_1:31510363-31510382 | Msa0543960:intron | 35.0% | |
| GATATTGCCTGAGAAAAATC+TGG | - | chr4_1:31510581-31510600 | Msa0543960:intron | 35.0% | |
| ! | CTATTTTACCAGTGGAAGAA+GGG | - | chr4_1:31510819-31510838 | Msa0543960:intron | 35.0% |
| TTGTCATGTTTGTAAAACCG+CGG | + | chr4_1:31511194-31511213 | None:intergenic | 35.0% | |
| GGAATTCCAGCAAATTAGAA+TGG | - | chr4_1:31511269-31511288 | Msa0543960:CDS | 35.0% | |
| ! | TCCGTTTGAAGCAGAGATTA+CGG | - | chr4_1:31504635-31504654 | Msa0543960:CDS | 40.0% |
| TCAGCACCAAGTTCAATTTC+AGG | + | chr4_1:31504681-31504700 | None:intergenic | 40.0% | |
| AGTTGCTCTCCATGATTCTA+TGG | - | chr4_1:31504989-31505008 | Msa0543960:intron | 40.0% | |
| TTGAAGGGTCAGCAAAAACT+GGG | + | chr4_1:31505025-31505044 | None:intergenic | 40.0% | |
| ATTGAAGGGTCAGCAAAAAC+TGG | + | chr4_1:31505026-31505045 | None:intergenic | 40.0% | |
| !!! | CATGTTTTTTCCAAGGGGAA+TGG | - | chr4_1:31505072-31505091 | Msa0543960:intron | 40.0% |
| !!! | TGTTTTTTCCAAGGGGAATG+GGG | - | chr4_1:31505074-31505093 | Msa0543960:intron | 40.0% |
| ! | TTGTTGATAGGTGTTCCATG+GGG | - | chr4_1:31505310-31505329 | Msa0543960:intron | 40.0% |
| TAGCCAGAGAACATCATTGT+CGG | + | chr4_1:31505336-31505355 | None:intergenic | 40.0% | |
| CCAATGAATTCACTCAATGC+AGG | + | chr4_1:31505650-31505669 | None:intergenic | 40.0% | |
| CCTGCATTGAGTGAATTCAT+TGG | - | chr4_1:31505647-31505666 | Msa0543960:intron | 40.0% | |
| AAACTCAAGTCAACCTGCTT+GGG | + | chr4_1:31505965-31505984 | None:intergenic | 40.0% | |
| TAAACTCAAGTCAACCTGCT+TGG | + | chr4_1:31505966-31505985 | None:intergenic | 40.0% | |
| CTTGATTGTAGCGTGAAGAT+TGG | - | chr4_1:31506277-31506296 | Msa0543960:CDS | 40.0% | |
| GCTCAATGAACTCAAACAAC+TGG | - | chr4_1:31506380-31506399 | Msa0543960:CDS | 40.0% | |
| GAACTCAAACAACTGGACAA+TGG | - | chr4_1:31506387-31506406 | Msa0543960:CDS | 40.0% | |
| AGGAGAAAGAGAGTTTGACA+AGG | + | chr4_1:31506515-31506534 | None:intergenic | 40.0% | |
| ! | ATTTTGTTCTCGAGGCTAGT+CGG | - | chr4_1:31506777-31506796 | Msa0543960:intron | 40.0% |
| GCAACAAACCTGAGTTTCAT+TGG | + | chr4_1:31506921-31506940 | None:intergenic | 40.0% | |
| TACAGTTTCTGTCTATCGTG+AGG | - | chr4_1:31507010-31507029 | Msa0543960:intron | 40.0% | |
| GCTACATGTTCACAGTCAAT+TGG | - | chr4_1:31507204-31507223 | Msa0543960:CDS | 40.0% | |
| ! | TTTTGCATGCTCATCCTTTC+AGG | - | chr4_1:31507699-31507718 | Msa0543960:CDS | 40.0% |
| ATCATGAATACGAGCCTGAA+AGG | + | chr4_1:31507716-31507735 | None:intergenic | 40.0% | |
| ! | AGACCAAGCAATTGTTGCTT+TGG | - | chr4_1:31507759-31507778 | Msa0543960:CDS | 40.0% |
| TTGCCAAAGCAACAATTGCT+TGG | + | chr4_1:31507765-31507784 | None:intergenic | 40.0% | |
| GACTGATGTCAATGCTGAAA+CGG | - | chr4_1:31507831-31507850 | Msa0543960:CDS | 40.0% | |
| ACTGATGTCAATGCTGAAAC+GGG | - | chr4_1:31507832-31507851 | Msa0543960:CDS | 40.0% | |
| AAACAACAGGAGATGGAGAA+GGG | + | chr4_1:31507873-31507892 | None:intergenic | 40.0% | |
| TCATCTGCTTGCAAACAAGT+TGG | - | chr4_1:31507915-31507934 | Msa0543960:CDS | 40.0% | |
| !! | GCAAACAAGTTGGTTAACCA+CGG | - | chr4_1:31507925-31507944 | Msa0543960:CDS | 40.0% |
| CTCCTGTTTATCACAATTGC+CGG | - | chr4_1:31508148-31508167 | Msa0543960:CDS | 40.0% | |
| ATCCGGCAATTGTGATAAAC+AGG | + | chr4_1:31508153-31508172 | None:intergenic | 40.0% | |
| ! | TGCCGGATATTTGCTAATGA+CGG | - | chr4_1:31508165-31508184 | Msa0543960:intron | 40.0% |
| TCCCGTCATTAGCAAATATC+CGG | + | chr4_1:31508170-31508189 | None:intergenic | 40.0% | |
| !! | GGCTGCTTTGTTATTGTGAT+CGG | - | chr4_1:31508190-31508209 | Msa0543960:intron | 40.0% |
| ! | CGACAACTTTTGCAAGATCT+CGG | + | chr4_1:31508324-31508343 | None:intergenic | 40.0% |
| TCTTGCAAAAGTTGTCGATG+AGG | - | chr4_1:31508327-31508346 | Msa0543960:intron | 40.0% | |
| ! | TTCTTTTTGAACCCAAAGGC+CGG | - | chr4_1:31508368-31508387 | Msa0543960:intron | 40.0% |
| ATATGTGTTGGATGTGGTGA+AGG | - | chr4_1:31508436-31508455 | Msa0543960:intron | 40.0% | |
| GTAGGACAATATCATGAGAG+CGG | + | chr4_1:31508534-31508553 | None:intergenic | 40.0% | |
| GGATTCCTCTATATGTTCGT+AGG | - | chr4_1:31508626-31508645 | Msa0543960:intron | 40.0% | |
| TGTTCGTAGGGTAATTCATC+CGG | - | chr4_1:31508639-31508658 | Msa0543960:intron | 40.0% | |
| GACTGAAAAACCGAATGATG+AGG | - | chr4_1:31508669-31508688 | Msa0543960:intron | 40.0% | |
| GCAGCTGATCGTAATTGTAA+CGG | + | chr4_1:31508706-31508725 | None:intergenic | 40.0% | |
| ATCAGAAGGGACTCTACAAT+AGG | + | chr4_1:31508833-31508852 | None:intergenic | 40.0% | |
| TTACACCGTTGAATCAAGGT+TGG | + | chr4_1:31509048-31509067 | None:intergenic | 40.0% | |
| TCAGTATCATTCCCCTCATA+TGG | + | chr4_1:31509375-31509394 | None:intergenic | 40.0% | |
| TGCACCTAGTATGAGTAATG+GGG | - | chr4_1:31509398-31509417 | Msa0543960:intron | 40.0% | |
| TCTTCGTCGCTAACAACAAT+TGG | + | chr4_1:31509651-31509670 | None:intergenic | 40.0% | |
| ! | TCTACAACTTGTTTCCCATG+TGG | + | chr4_1:31509741-31509760 | None:intergenic | 40.0% |
| ! | CTAAAACCGTGTTTTCTTCC+TGG | - | chr4_1:31509837-31509856 | Msa0543960:intron | 40.0% |
| ! | AAAACCGTGTTTTCTTCCTG+GGG | - | chr4_1:31509839-31509858 | Msa0543960:intron | 40.0% |
| TAAGCAAAGCTAGTGATGCA+AGG | + | chr4_1:31509953-31509972 | None:intergenic | 40.0% | |
| AGTCCGTAAAGAATGTCCTT+AGG | - | chr4_1:31510124-31510143 | Msa0543960:intron | 40.0% | |
| TCATGTTAGTGAGTGTCCTA+AGG | + | chr4_1:31510143-31510162 | None:intergenic | 40.0% | |
| ! | TTCACTCGCTGATTAAGAAG+AGG | + | chr4_1:31510391-31510410 | None:intergenic | 40.0% |
| !! | TTTGGACGCTATTTTACCAG+TGG | - | chr4_1:31510811-31510830 | Msa0543960:intron | 40.0% |
| !! | GCTATTTTACCAGTGGAAGA+AGG | - | chr4_1:31510818-31510837 | Msa0543960:intron | 40.0% |
| AAGAGAGACTGCTGATAGTA+TGG | - | chr4_1:31510876-31510895 | Msa0543960:CDS | 40.0% | |
| ATAGTATGGAGTAACTCTGC+TGG | - | chr4_1:31510890-31510909 | Msa0543960:CDS | 40.0% | |
| !! | CACAGCTTTAGAACACTTAG+AGG | - | chr4_1:31511215-31511234 | Msa0543960:CDS | 40.0% |
| !! | AAATCTCAGCTCTCTAGAAC+AGG | - | chr4_1:31511248-31511267 | Msa0543960:CDS | 40.0% |
| GCCGTAATCTCTGCTTCAAA+CGG | + | chr4_1:31504639-31504658 | None:intergenic | 45.0% | |
| !! | AGGCTTTACAGGGTTAGTTC+AGG | - | chr4_1:31504830-31504849 | Msa0543960:intron | 45.0% |
| GCTGTCCAACTTTATGCTTC+AGG | - | chr4_1:31505270-31505289 | Msa0543960:intron | 45.0% | |
| ATGATGTTCTCTGGCTACAG+AGG | - | chr4_1:31505339-31505358 | Msa0543960:intron | 45.0% | |
| TGATGTTCTCTGGCTACAGA+GGG | - | chr4_1:31505340-31505359 | Msa0543960:intron | 45.0% | |
| TCTGCGTGTTTATGTTCTGC+AGG | - | chr4_1:31505514-31505533 | Msa0543960:intron | 45.0% | |
| ACGAAAACGTGTGATGCTAG+AGG | + | chr4_1:31505792-31505811 | None:intergenic | 45.0% | |
| TGTACCATTTCTGCTGAGAG+AGG | + | chr4_1:31506312-31506331 | None:intergenic | 45.0% | |
| GGCACGGGAAATATCAAATG+AGG | + | chr4_1:31506535-31506554 | None:intergenic | 45.0% | |
| TATTTCCCGTGCCCAAAACT+CGG | - | chr4_1:31506542-31506561 | Msa0543960:CDS | 45.0% | |
| ! | TGAAACAGCTGCCGAGTTTT+GGG | + | chr4_1:31506556-31506575 | None:intergenic | 45.0% |
| ! | ATGAAACAGCTGCCGAGTTT+TGG | + | chr4_1:31506557-31506576 | None:intergenic | 45.0% |
| !! | GACTAGCCTCGAGAACAAAA+TGG | + | chr4_1:31506778-31506797 | None:intergenic | 45.0% |
| AAAGGAGATTGAAGCTTCGC+CGG | - | chr4_1:31506832-31506851 | Msa0543960:intron | 45.0% | |
| GATAATGCAGCAGATTCTCC+CGG | + | chr4_1:31506854-31506873 | None:intergenic | 45.0% | |
| GTGCACATGGAGAGATTTGA+TGG | - | chr4_1:31507038-31507057 | Msa0543960:intron | 45.0% | |
| CAAACAACAGGAGATGGAGA+AGG | + | chr4_1:31507874-31507893 | None:intergenic | 45.0% | |
| GATGACAGATATCAGTGAGG+TGG | + | chr4_1:31507900-31507919 | None:intergenic | 45.0% | |
| GCAGATGACAGATATCAGTG+AGG | + | chr4_1:31507903-31507922 | None:intergenic | 45.0% | |
| ! | GCCGGATATTTGCTAATGAC+GGG | - | chr4_1:31508166-31508185 | Msa0543960:intron | 45.0% |
| ! | GGATATTTGCTAATGACGGG+AGG | - | chr4_1:31508169-31508188 | Msa0543960:intron | 45.0% |
| GTGATCGGAAGAAGCTTGAA+TGG | - | chr4_1:31508205-31508224 | Msa0543960:intron | 45.0% | |
| TCGGAAGAAGCTTGAATGGT+TGG | - | chr4_1:31508209-31508228 | Msa0543960:intron | 45.0% | |
| ! | CTTTTGCAAGATCTCGGCTA+AGG | + | chr4_1:31508318-31508337 | None:intergenic | 45.0% |
| AAATCATTGCCCTCATCCTC+TGG | + | chr4_1:31508394-31508413 | None:intergenic | 45.0% | |
| CGTGACAATCCACACAAAGT+AGG | + | chr4_1:31508552-31508571 | None:intergenic | 45.0% | |
| GTTCGTAGGGTAATTCATCC+GGG | - | chr4_1:31508640-31508659 | Msa0543960:intron | 45.0% | |
| TTCGTAGGGTAATTCATCCG+GGG | - | chr4_1:31508641-31508660 | Msa0543960:intron | 45.0% | |
| GAAAAACCGAATGATGAGGG+AGG | - | chr4_1:31508673-31508692 | Msa0543960:intron | 45.0% | |
| GATACACCTCCCTCATCATT+CGG | + | chr4_1:31508682-31508701 | None:intergenic | 45.0% | |
| ACAATTACGATCAGCTGCTG+TGG | - | chr4_1:31508708-31508727 | Msa0543960:intron | 45.0% | |
| TGGAGGAAGGGAGATATCTA+AGG | - | chr4_1:31509239-31509258 | Msa0543960:intron | 45.0% | |
| GTGTCCCCATTACTCATACT+AGG | + | chr4_1:31509405-31509424 | None:intergenic | 45.0% | |
| ! | GAGTAATGGGGACACATTGA+AGG | - | chr4_1:31509410-31509429 | Msa0543960:intron | 45.0% |
| !!! | TTTTGGGACATGGTCCACAT+GGG | - | chr4_1:31509724-31509743 | Msa0543960:intron | 45.0% |
| ! | CTGAAGGAGTATGGTGAAGA+TGG | - | chr4_1:31509768-31509787 | Msa0543960:intron | 45.0% |
| ! | AAACCGTGTTTTCTTCCTGG+GGG | - | chr4_1:31509840-31509859 | Msa0543960:intron | 45.0% |
| ! | AGAAACCGGCTAGTCAATGA+CGG | + | chr4_1:31510548-31510567 | None:intergenic | 45.0% |
| GCCTGAGAAAAATCTGGTGA+CGG | - | chr4_1:31510587-31510606 | Msa0543960:intron | 45.0% | |
| ! | ACCGTCACCAGATTTTTCTC+AGG | + | chr4_1:31510591-31510610 | None:intergenic | 45.0% |
| TACAGTAGAAATGCATGCCG+CGG | - | chr4_1:31511174-31511193 | Msa0543960:CDS | 45.0% | |
| ! | TTTTTCCAAGGGGAATGGGG+AGG | - | chr4_1:31505077-31505096 | Msa0543960:intron | 50.0% |
| ! | TTTTCCAAGGGGAATGGGGA+GGG | - | chr4_1:31505078-31505097 | Msa0543960:intron | 50.0% |
| TTATGTTCTGCAGGCGTGTG+AGG | - | chr4_1:31505523-31505542 | Msa0543960:intron | 50.0% | |
| AAAGGATTTCGGTCCCAAGC+AGG | - | chr4_1:31505949-31505968 | Msa0543960:intron | 50.0% | |
| AAGGAGATTGAAGCTTCGCC+GGG | - | chr4_1:31506833-31506852 | Msa0543960:intron | 50.0% | |
| TGGTCTACAACTCAAGGACG+TGG | + | chr4_1:31507135-31507154 | None:intergenic | 50.0% | |
| TGGCTGCAAACAACAGGAGA+TGG | + | chr4_1:31507880-31507899 | None:intergenic | 50.0% | |
| ! | AAGATCTCGGCTAAGGTACC+TGG | + | chr4_1:31508311-31508330 | None:intergenic | 50.0% |
| ! | GGTGGCTTTTCAAATGCTCG+GGG | + | chr4_1:31508513-31508532 | None:intergenic | 50.0% |
| ! | CGGTGGCTTTTCAAATGCTC+GGG | + | chr4_1:31508514-31508533 | None:intergenic | 50.0% |
| ! | GCGGTGGCTTTTCAAATGCT+CGG | + | chr4_1:31508515-31508534 | None:intergenic | 50.0% |
| GGACAATATCATGAGAGCGG+TGG | + | chr4_1:31508531-31508550 | None:intergenic | 50.0% | |
| !! | GGTTTTTCAGTCTCTTGCCC+CGG | + | chr4_1:31508661-31508680 | None:intergenic | 50.0% |
| GGCCAAGAATGCCTCATGAT+CGG | - | chr4_1:31508746-31508765 | Msa0543960:intron | 50.0% | |
| AGTTCTTCACGCCGATCATG+AGG | + | chr4_1:31508760-31508779 | None:intergenic | 50.0% | |
| TGCTTCTGCAGTGCCATATG+AGG | - | chr4_1:31509359-31509378 | Msa0543960:intron | 50.0% | |
| GCTTCTGCAGTGCCATATGA+GGG | - | chr4_1:31509360-31509379 | Msa0543960:intron | 50.0% | |
| CTTCTGCAGTGCCATATGAG+GGG | - | chr4_1:31509361-31509380 | Msa0543960:intron | 50.0% | |
| GCAAGATCAGAAGCCAGAGA+GGG | + | chr4_1:31509513-31509532 | None:intergenic | 50.0% | |
| TGCAAGATCAGAAGCCAGAG+AGG | + | chr4_1:31509514-31509533 | None:intergenic | 50.0% | |
| !!! | CTTTTGGGACATGGTCCACA+TGG | - | chr4_1:31509723-31509742 | Msa0543960:intron | 50.0% |
| CATCCCCCAGGAAGAAAACA+CGG | + | chr4_1:31509846-31509865 | None:intergenic | 50.0% | |
| ! | GTGTTTTCTTCCTGGGGGAT+GGG | - | chr4_1:31509845-31509864 | Msa0543960:intron | 50.0% |
| ! | TGTTTTACATCCCATCCCCC+AGG | + | chr4_1:31509858-31509877 | None:intergenic | 50.0% |
| GGGGATGGGATGTAAAACAC+AGG | - | chr4_1:31509859-31509878 | Msa0543960:intron | 50.0% | |
| ! | CAGATCCGTCATTGACTAGC+CGG | - | chr4_1:31510540-31510559 | Msa0543960:CDS | 50.0% |
| ACCAGTGGAAGAAGGGACTT+TGG | - | chr4_1:31510826-31510845 | Msa0543960:intron | 50.0% | |
| ACCAAAGTCCCTTCTTCCAC+TGG | + | chr4_1:31510830-31510849 | None:intergenic | 50.0% | |
| TTTCCAAGGGGAATGGGGAG+GGG | - | chr4_1:31505079-31505098 | Msa0543960:intron | 55.0% | |
| GAACATCATTGTCGGCCCCA+TGG | + | chr4_1:31505328-31505347 | None:intergenic | 55.0% | |
| GGGCCGACAATGATGTTCTC+TGG | - | chr4_1:31505330-31505349 | Msa0543960:intron | 55.0% | |
| GCGTCCTCTCTCAGCAGAAA+TGG | - | chr4_1:31506305-31506324 | Msa0543960:CDS | 55.0% | |
| GTGAGGTGGCTGCAAACAAC+AGG | + | chr4_1:31507886-31507905 | None:intergenic | 55.0% | |
| GCTGTGGCTCTTCTACGTCA+CGG | - | chr4_1:31508724-31508743 | Msa0543960:intron | 55.0% | |
| CTGTGGCTCTTCTACGTCAC+GGG | - | chr4_1:31508725-31508744 | Msa0543960:intron | 55.0% | |
| ! | CGCCGATCATGAGGCATTCT+TGG | + | chr4_1:31508751-31508770 | None:intergenic | 55.0% |
| TCGGCGTGAAGAACTGACTG+AGG | - | chr4_1:31508765-31508784 | Msa0543960:intron | 55.0% | |
| ! | GCAAGTTGGCATGACTCCTC+AGG | - | chr4_1:31509281-31509300 | Msa0543960:intron | 55.0% |
| ! | TGATTCGGGAAAGCCCTCTC+TGG | - | chr4_1:31509497-31509516 | Msa0543960:CDS | 55.0% |
| ! | CGTGTTTTCTTCCTGGGGGA+TGG | - | chr4_1:31509844-31509863 | Msa0543960:intron | 55.0% |
| TTCCAAGGGGAATGGGGAGG+GGG | - | chr4_1:31505080-31505099 | Msa0543960:intron | 60.0% | |
| !!! | AGCTGCCGAGTTTTGGGCAC+GGG | + | chr4_1:31506550-31506569 | None:intergenic | 60.0% |
| !!! | CAGCTGCCGAGTTTTGGGCA+CGG | + | chr4_1:31506551-31506570 | None:intergenic | 60.0% |
| TCGTGAGGCAGCTGTGCACA+TGG | - | chr4_1:31507025-31507044 | Msa0543960:intron | 60.0% | |
| TCATCCTCTGGCCGGCCTTT+GGG | + | chr4_1:31508382-31508401 | None:intergenic | 60.0% | |
| AAAGGCCGGCCAGAGGATGA+GGG | - | chr4_1:31508382-31508401 | Msa0543960:intron | 60.0% | |
| CATTGCCCTCATCCTCTGGC+CGG | + | chr4_1:31508390-31508409 | None:intergenic | 60.0% | |
| TGAACCCAAAGGCCGGCCAG+AGG | - | chr4_1:31508375-31508394 | Msa0543960:intron | 65.0% | |
| CTCATCCTCTGGCCGGCCTT+TGG | + | chr4_1:31508383-31508402 | None:intergenic | 65.0% | |
| CAAAGGCCGGCCAGAGGATG+AGG | - | chr4_1:31508381-31508400 | Msa0543960:intron | 65.0% | |
| CACCCCCTCCCCATTCCCCT+TGG | + | chr4_1:31505085-31505104 | None:intergenic | 70.0% | |
| GGGGAATGGGGAGGGGGTGA+TGG | - | chr4_1:31505086-31505105 | Msa0543960:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 31504591 | 31511308 | 31504591 | ID=Msa0543960;Name=Msa0543960 |
| chr4_1 | mRNA | 31504591 | 31511308 | 31504591 | ID=Msa0543960-mRNA-1;Parent=Msa0543960;Name=Msa0543960-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0.9|0.81|0.90|1|1|11|0|882 |
| chr4_1 | exon | 31511048 | 31511308 | 31511048 | ID=Msa0543960-mRNA-1:exon:8176;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31510847 | 31510945 | 31510847 | ID=Msa0543960-mRNA-1:exon:8175;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31510496 | 31510579 | 31510496 | ID=Msa0543960-mRNA-1:exon:8174;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31510277 | 31510363 | 31510277 | ID=Msa0543960-mRNA-1:exon:8173;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31509491 | 31509611 | 31509491 | ID=Msa0543960-mRNA-1:exon:8172;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31508968 | 31509149 | 31508968 | ID=Msa0543960-mRNA-1:exon:8171;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31508840 | 31508884 | 31508840 | ID=Msa0543960-mRNA-1:exon:8170;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31507673 | 31508178 | 31507673 | ID=Msa0543960-mRNA-1:exon:8169;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31507113 | 31507587 | 31507113 | ID=Msa0543960-mRNA-1:exon:8168;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31506019 | 31506677 | 31506019 | ID=Msa0543960-mRNA-1:exon:8167;Parent=Msa0543960-mRNA-1 |
| chr4_1 | exon | 31504591 | 31504720 | 31504591 | ID=Msa0543960-mRNA-1:exon:8166;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31511048 | 31511308 | 31511048 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31510847 | 31510945 | 31510847 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31510496 | 31510579 | 31510496 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31510277 | 31510363 | 31510277 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31509491 | 31509611 | 31509491 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31508968 | 31509149 | 31508968 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31508840 | 31508884 | 31508840 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31507673 | 31508178 | 31507673 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31507113 | 31507587 | 31507113 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31506019 | 31506677 | 31506019 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| chr4_1 | CDS | 31504591 | 31504720 | 31504591 | ID=Msa0543960-mRNA-1:cds;Parent=Msa0543960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
