AlfalfaGEDB | Msa1162150

M. sativa cultivar zhongmu-4 / Msa1162150

KEGG: K19036
GO: GO:0000049 GO:0000122 GO:0000166 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003008 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003690 GO:0003697 GO:0003700 GO:0003723 GO:0003724 GO:0003824 GO:0004003 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0007275 GO:0007399 GO:0007417 GO:0008026 GO:0008094 GO:0008134 GO:0008144 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0021510 GO:0021515 GO:0021517 GO:0021522 GO:0021953 GO:0022008 GO:0022607 GO:0030154 GO:0030182 GO:0030424 GO:0030426 GO:0030427 GO:0030554 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032574 GO:0032575 GO:0032991 GO:0033267 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0036477 GO:0042623 GO:0042995 GO:0043005 GO:0043021 GO:0043022 GO:0043025 GO:0043043 GO:0043139 GO:0043141 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043603 GO:0043604 GO:0043621 GO:0043933 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044297 GO:0044424 GO:0044444 GO:0044463 GO:0044464 GO:0044877 GO:0045892 GO:0045934 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050877 GO:0050905 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051259 GO:0051260 GO:0051276 GO:0060255 GO:0065003 GO:0065007 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0097367 GO:0097458 GO:0120025 GO:0120038 GO:0140097 GO:0140098 GO:0140110 GO:0150034 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:1990904 GO:1990955 GO:2000112 GO:2000113 GO:2001141
PFAM: PF13086.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1162150	XP_003625170.1	99.535	645	3	0	1	645	1	645	0.0	1313

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1162150	sp\|Q60560\|SMBP2_MESAU	47.597	645	316	10	12	642	5	641	0.0	551

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1162150	G7KTL0	99.535	645	3	0	1	645	1	645	0.0	1313

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000560	Msa1162150	0.803569	3.274978e-49	-8.615850e-47
Msa0007480	Msa1162150	0.815511	8.905287e-52	-8.615850e-47
Msa0018160	Msa1162150	0.805187	1.506474e-49	-8.615850e-47
Msa0027230	Msa1162150	0.809304	2.021191e-50	-8.615850e-47
Msa0036870	Msa1162150	0.813508	2.469918e-51	-8.615850e-47
Msa0047070	Msa1162150	0.801566	8.474790e-49	-8.615850e-47
Msa0074350	Msa1162150	0.807374	5.216040e-50	-8.615850e-47
Msa0075220	Msa1162150	0.847938	8.423609e-60	-8.615850e-47
Msa0087940	Msa1162150	0.804438	2.160332e-49	-8.615850e-47
Msa0090400	Msa1162150	0.823133	1.631807e-53	-8.615850e-47
Msa0602880	Msa1162150	0.835627	1.503083e-56	-8.615850e-47
Msa0643940	Msa1162150	0.814783	1.292178e-51	-8.615850e-47
Msa0683570	Msa1162150	0.815341	9.716662e-52	-8.615850e-47
Msa0786500	Msa1162150	0.811512	6.747969e-51	-8.615850e-47
Msa0122970	Msa1162150	0.808207	3.468768e-50	-8.615850e-47
Msa0137880	Msa1162150	0.837235	5.857484e-57	-8.615850e-47
Msa0167520	Msa1162150	0.849744	2.655731e-60	-8.615850e-47
Msa0379770	Msa1162150	0.809882	1.518598e-50	-8.615850e-47
Msa0419700	Msa1162150	0.817161	3.806802e-52	-8.615850e-47
Msa0428150	Msa1162150	0.844995	5.351509e-59	-8.615850e-47
Msa0462500	Msa1162150	0.847036	1.490293e-59	-8.615850e-47
Msa0474520	Msa1162150	0.819646	1.041304e-52	-8.615850e-47
Msa0475790	Msa1162150	0.803002	4.291517e-49	-8.615850e-47
Msa1029250	Msa1162150	0.807035	6.151564e-50	-8.615850e-47
Msa1034780	Msa1162150	0.972369	1.183404e-134	-8.615850e-47
Msa1045140	Msa1162150	0.810464	1.138121e-50	-8.615850e-47
Msa1074370	Msa1162150	0.809362	1.964510e-50	-8.615850e-47
Msa1074810	Msa1162150	0.928720	1.936928e-92	-8.615850e-47
Msa1096960	Msa1162150	0.815425	9.304768e-52	-8.615850e-47
Msa1102220	Msa1162150	0.832798	7.694714e-56	-8.615850e-47
Msa0255090	Msa1162150	0.839747	1.316972e-57	-8.615850e-47
Msa0259380	Msa1162150	0.833445	5.311562e-56	-8.615850e-47
Msa0267110	Msa1162150	0.830318	3.141207e-55	-8.615850e-47
Msa0292330	Msa1162150	0.807981	3.876106e-50	-8.615850e-47
Msa0292400	Msa1162150	0.822386	2.435028e-53	-8.615850e-47
Msa0294160	Msa1162150	0.810065	1.387535e-50	-8.615850e-47
Msa0349710	Msa1162150	0.802717	4.913058e-49	-8.615850e-47
Msa1115670	Msa1162150	0.949190	2.099256e-107	-8.615850e-47
Msa1130280	Msa1162150	0.803476	3.423989e-49	-8.615850e-47
Msa1162150	Msa1196450	0.817187	3.755159e-52	-8.615850e-47
Msa1162150	Msa1202620	0.821691	3.528856e-53	-8.615850e-47
Msa1162150	Msa1222850	0.824652	7.187035e-54	-8.615850e-47
Msa1162150	Msa1302830	0.833363	5.569217e-56	-8.615850e-47
Msa1162150	Msa1321340	0.804190	2.433340e-49	-8.615850e-47
Msa1162150	Msa1330410	0.802956	4.385398e-49	-8.615850e-47
Msa1162150	Msa1369550	0.811807	5.820289e-51	-8.615850e-47
Msa1162150	Msa1391770	0.801440	8.994122e-49	-8.615850e-47
Msa1162150	Msa1454140	0.810456	1.142663e-50	-8.615850e-47
Msa0511750	Msa1162150	0.802139	6.463417e-49	-8.615850e-47
Msa0543960	Msa1162150	0.803337	3.657917e-49	-8.615850e-47
Msa0547900	Msa1162150	0.834220	3.399113e-56	-8.615850e-47
Msa0569200	Msa1162150	0.814760	1.307180e-51	-8.615850e-47
Msa0869780	Msa1162150	0.812005	5.268580e-51	-8.615850e-47
Msa0909230	Msa1162150	0.805158	1.527820e-49	-8.615850e-47
Msa0919770	Msa1162150	0.804815	1.801907e-49	-8.615850e-47
Msa0945110	Msa1162150	0.836696	8.042265e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1162150	MtrunA17_Chr7g0257921	99.535	645	3	0	1	645	1	645	0.0	1313
Msa1162150	MtrunA17_Chr1g0165651	34.402	686	373	17	13	634	256	928	1.44e-107	347
Msa1162150	MtrunA17_Chr5g0400101	32.735	446	274	11	195	633	477	903	3.64e-61	221
Msa1162150	MtrunA17_Chr5g0394941	27.855	578	336	20	91	640	296	820	1.22e-43	168
Msa1162150	MtrunA17_Chr2g0304151	27.682	578	337	20	91	640	296	820	3.56e-43	167
Msa1162150	MtrunA17_Chr7g0228141	28.947	532	295	14	107	611	277	752	1.14e-42	164
Msa1162150	MtrunA17_Chr2g0334291	29.691	485	227	17	240	620	1579	2053	1.42e-38	153
Msa1162150	MtrunA17_Chr8g0343741	37.857	280	151	11	351	617	975	1244	1.87e-34	140
Msa1162150	MtrunA17_Chr5g0433321	34.521	365	201	14	300	641	507	856	9.34e-34	138
Msa1162150	MtrunA17_Chr3g0109541	34.062	320	157	12	352	641	585	880	4.84e-33	135
Msa1162150	MtrunA17_Chr5g0422511	31.481	432	220	14	240	641	368	753	2.45e-32	133
Msa1162150	MtrunA17_Chr3g0109551	34.195	348	190	13	318	641	583	915	9.26e-32	132
Msa1162150	MtrunA17_Chr5g0433371	36.644	292	164	11	349	627	583	866	1.49e-31	131
Msa1162150	MtrunA17_Chr5g0433471	37.543	293	157	11	350	627	584	865	9.66e-31	129
Msa1162150	MtrunA17_Chr5g0433421	36.918	279	137	12	370	627	690	950	1.20e-29	125
Msa1162150	MtrunA17_Chr8g0375181	33.333	303	166	11	345	627	631	917	9.02e-29	123
Msa1162150	MtrunA17_Chr3g0094211	34.014	294	168	11	328	605	527	810	5.90e-28	120
Msa1162150	MtrunA17_Chr8g0375151	32.082	293	163	11	345	619	526	800	4.73e-27	117
Msa1162150	MtrunA17_Chr5g0433361	35.570	298	142	14	350	625	564	833	5.13e-25	110
Msa1162150	MtrunA17_Chr1g0173701	32.624	282	154	9	378	641	111	374	5.77e-25	107
Msa1162150	MtrunA17_Chr5g0433511	36.036	222	124	9	370	581	624	837	9.59e-19	90.9
Msa1162150	MtrunA17_Chr5g0433331	40.171	117	65	3	533	644	9	125	2.94e-16	77.0
Msa1162150	MtrunA17_Chr5g0433341	41.525	118	62	4	348	460	11	126	1.75e-14	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1162150	AT2G03270.1	82.520	635	110	1	11	644	5	639	0.0	1080
Msa1162150	AT5G35970.1	34.532	695	394	13	1	639	252	941	3.09e-109	352
Msa1162150	AT5G47010.1	32.960	446	273	11	195	633	489	915	2.74e-62	225
Msa1162150	AT1G08840.1	30.818	477	265	10	168	633	861	1283	1.04e-48	184
Msa1162150	AT1G08840.3	30.818	477	265	10	168	633	896	1318	1.25e-48	184
Msa1162150	AT1G08840.4	30.818	477	265	10	168	633	893	1315	1.32e-48	184
Msa1162150	AT1G08840.2	30.818	477	265	10	168	633	880	1302	1.45e-48	184
Msa1162150	AT4G15570.2	33.103	435	210	16	229	632	276	660	3.52e-42	163
Msa1162150	AT4G15570.4	33.103	435	210	16	229	632	276	660	3.52e-42	163
Msa1162150	AT4G15570.3	33.103	435	210	16	229	632	365	749	8.82e-42	162
Msa1162150	AT4G15570.1	33.103	435	210	16	229	632	365	749	8.82e-42	162
Msa1162150	AT1G05460.2	27.931	580	333	20	90	639	297	821	2.26e-39	155
Msa1162150	AT1G05460.1	27.931	580	333	20	90	639	297	821	6.72e-39	154
Msa1162150	AT1G16800.1	32.345	371	177	14	307	620	1512	1865	7.09e-36	145
Msa1162150	AT1G16800.3	32.345	371	177	14	307	620	1554	1907	7.39e-36	145
Msa1162150	AT1G16800.2	32.345	371	177	14	307	620	1624	1977	8.54e-36	145
Msa1162150	AT2G19120.1	38.545	275	144	11	351	611	755	1018	2.42e-35	143
Msa1162150	AT4G30100.2	38.235	272	149	11	351	611	918	1181	1.22e-34	141
Msa1162150	AT4G30100.1	38.235	272	149	11	351	611	918	1181	1.22e-34	141
Msa1162150	AT5G37030.1	30.474	443	250	16	195	621	204	604	5.94e-32	132
Msa1162150	AT1G65780.1	36.656	311	163	10	351	641	547	843	2.72e-31	131
Msa1162150	AT5G52090.1	33.223	301	146	12	345	616	340	614	9.61e-30	125
Msa1162150	AT5G37150.1	34.114	299	146	13	345	616	503	777	1.36e-29	125
Msa1162150	AT5G37140.1	34.615	286	163	12	342	616	358	630	4.87e-29	123
Msa1162150	AT4G05540.1	33.010	309	153	13	342	621	404	687	4.50e-28	120
Msa1162150	AT5G37165.1	31.313	297	169	12	345	621	89	370	3.19e-27	115
Msa1162150	AT1G65810.2	34.752	282	166	10	349	620	533	806	1.94e-26	115
Msa1162150	AT1G65810.3	34.752	282	166	10	349	620	533	806	2.12e-26	115
Msa1162150	AT1G65810.1	34.752	282	166	10	349	620	533	806	2.14e-26	115
Msa1162150	AT1G08840.5	27.962	211	105	3	168	378	880	1043	5.27e-12	69.7

Find 143 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTAAATTCTAAATAGAAAA+AGG	0.186242	7_4:+52645662	None:intergenic
GATCTAATTCCTGTCTTGTT+TGG	0.187007	7_4:-52650632	Msa1162150:CDS
CTTCAGATTCACCTTCATTA+AGG	0.195895	7_4:+52646396	None:intergenic
ATCTAATTCCTGTCTTGTTT+GGG	0.198645	7_4:-52650631	Msa1162150:CDS
AAACTCAACAAGGCTGATTT+AGG	0.211297	7_4:-52651286	Msa1162150:CDS
CACTGGCGCGTCGAGGAATT+TGG	0.237660	7_4:-52652201	Msa1162150:CDS
CTGAAAATAGACAGGGCTTA+TGG	0.259534	7_4:-52651569	Msa1162150:intron
GATTTAGGTTCTCCTGCTCT+TGG	0.314527	7_4:-52651271	Msa1162150:CDS
AGCATCATCACCTCTCTCTT+TGG	0.316727	7_4:-52652559	Msa1162150:CDS
AGGTGTAGTTTACAGATTAA+AGG	0.323435	7_4:-52651245	Msa1162150:intron
TCGAACCATTGATATAATAA+TGG	0.339172	7_4:+52646082	None:intergenic
ACAGCAACCTTAACAACCTT+TGG	0.342411	7_4:+52645744	None:intergenic
TTCTATACCTGGGCAGCATA+TGG	0.354013	7_4:+52646305	None:intergenic
TGAAAATAGACAGGGCTTAT+GGG	0.356253	7_4:-52651568	Msa1162150:intron
CTCAACAGTTGATGGTTTCC+AGG	0.358877	7_4:-52646120	Msa1162150:CDS
GGACTGTTTAAACCATCTTC+TGG	0.360224	7_4:+52651077	None:intergenic
TTCAGATTCACCTTCATTAA+GGG	0.364033	7_4:+52646397	None:intergenic
TTTGAAGTGTGTGGATGTTC+AGG	0.371561	7_4:-52652144	Msa1162150:intron
GGGGTGCTTCCTTCTGATAT+TGG	0.372398	7_4:-52646338	Msa1162150:CDS
TAATATTGACTACTCTGATT+GGG	0.386813	7_4:-52647784	Msa1162150:CDS
ATTGAAATCTCAACAGTTGA+TGG	0.389005	7_4:-52646128	Msa1162150:CDS
TTCTTGCTACATGGACCTCC+TGG	0.393897	7_4:-52649582	Msa1162150:CDS
AAAATTCCCAAAGGTTGTTA+AGG	0.396559	7_4:-52645751	Msa1162150:three_prime_UTR
AGTGAAAGCTACATCCTTCT+TGG	0.402420	7_4:+52650589	None:intergenic
ATTCTTCGACGATAGGGCTT+TGG	0.402780	7_4:+52649608	None:intergenic
ATTTAGGTTCTCCTGCTCTT+GGG	0.407691	7_4:-52651270	Msa1162150:CDS
GGTACAAGATGTATACTTGC+AGG	0.415286	7_4:-52647232	Msa1162150:CDS
GAAAGACTTGCAGAACTGTA+TGG	0.424395	7_4:-52647136	Msa1162150:CDS
CAGCAACCTTAACAACCTTT+GGG	0.426273	7_4:+52645745	None:intergenic
TGATTGTGTCAGATGTGATA+TGG	0.428874	7_4:-52646447	Msa1162150:intron
GGTTCTCCTGCTCTTGGGCA+AGG	0.430385	7_4:-52651265	Msa1162150:CDS
AGTATTGCCAAGTTTCTTAG+AGG	0.430411	7_4:+52647757	None:intergenic
TCTATACCTGGGCAGCATAT+GGG	0.432716	7_4:+52646306	None:intergenic
TGCCTATTCATTCTGGTACT+CGG	0.437190	7_4:+52645773	None:intergenic
GTTGAGTAAAGGAGTGCATA+AGG	0.439077	7_4:-52650666	Msa1162150:CDS
ATAACAAGAAGAGACTAAAA+TGG	0.439479	7_4:+52645607	None:intergenic
CTACATGGACCTCCTGGAAC+GGG	0.440143	7_4:-52649576	Msa1162150:CDS
GGAAGCCATTATTATATCAA+TGG	0.442437	7_4:-52646087	Msa1162150:CDS
GCTTCAACACTTTGAATCGT+TGG	0.445524	7_4:+52647190	None:intergenic
TAAAGAGCTTTACAACAGTA+AGG	0.451542	7_4:-52647047	Msa1162150:intron
TGCATTTCTCTAACGTTCAC+TGG	0.456415	7_4:-52652650	Msa1162150:five_prime_UTR
TTTGATGATATACCAGAAGA+TGG	0.459661	7_4:-52651089	Msa1162150:CDS
TATCCAGAGAAGAGCGGAAA+AGG	0.461437	7_4:-52647847	Msa1162150:CDS
TGGCTTCCTTCTCTCTTCCC+TGG	0.465068	7_4:+52646102	None:intergenic
CACTCATTTACCTTGTGAGC+AGG	0.466716	7_4:+52651502	None:intergenic
GGGTTGTAATAGAGATGAAT+TGG	0.476356	7_4:+52652535	None:intergenic
CCCTCTTCTCGACTTGGAAA+AGG	0.479488	7_4:-52652514	Msa1162150:intron
GTAATATTGACTACTCTGAT+TGG	0.480849	7_4:-52647785	Msa1162150:CDS
GGGAGATACAGAAGGAACTT+AGG	0.481338	7_4:-52647874	Msa1162150:CDS
TAAGTTGATGCATACGGTAC+TGG	0.485752	7_4:+52647086	None:intergenic
CGAAGCTGCTCAAGCACTTG+AGG	0.488326	7_4:-52647711	Msa1162150:CDS
CCGTATGCATCAACTTATCA+TGG	0.489901	7_4:-52647080	Msa1162150:CDS
GAAGCTGAGAAGAAAGGCTT+AGG	0.491062	7_4:-52647172	Msa1162150:CDS
CATCCACACACTTCAAATTG+AGG	0.491912	7_4:+52652150	None:intergenic
TGCATCAACTTATCATGGAT+TGG	0.497886	7_4:-52647075	Msa1162150:CDS
CAGCCGTGTCTATGAGAAGA+AGG	0.500021	7_4:+52646767	None:intergenic
CTTCTTCTCATAGACACGGC+TGG	0.503095	7_4:-52646766	Msa1162150:CDS
TACAACCCCTCTTCTCGACT+TGG	0.503269	7_4:-52652520	Msa1162150:CDS
TTTAAACAGTCCCCTAAGGC+TGG	0.503315	7_4:-52651066	Msa1162150:CDS
TTCCTGTCTTGTTTGGGGAG+AGG	0.503750	7_4:-52650625	Msa1162150:CDS
AGAGTTAAGCTGGTGAGGAT+TGG	0.508519	7_4:-52648346	Msa1162150:CDS
GTGGTCTCGCAAATGACATT+CGG	0.510543	7_4:-52648173	Msa1162150:CDS
GCAAAGCGATTGGTGCAAAG+TGG	0.512365	7_4:-52646359	Msa1162150:CDS
ACATCCTTCTTGGACACTGT+TGG	0.515633	7_4:+52650599	None:intergenic
GAAAACATTCTTCGACGATA+GGG	0.516250	7_4:+52649602	None:intergenic
TTCTGCAAGTCTTTCAAAGA+GGG	0.517165	7_4:+52647144	None:intergenic
GGGGCTTCCTCTAAGAAACT+TGG	0.520260	7_4:-52647764	Msa1162150:CDS
TTTACAATTTAGGTACTTCG+AGG	0.523785	7_4:-52648204	Msa1162150:intron
TTCTTCTCATAGACACGGCT+GGG	0.525491	7_4:-52646765	Msa1162150:intron
TGCCTCTCCCCAAACAAGAC+AGG	0.527660	7_4:+52650623	None:intergenic
TGACATTCGGAAAGAAATGA+AGG	0.529523	7_4:-52648160	Msa1162150:intron
TATTACCCCATATGCTGCCC+AGG	0.533415	7_4:-52646312	Msa1162150:intron
CTATACCTGGGCAGCATATG+GGG	0.533542	7_4:+52646307	None:intergenic
TCAAGTGGTGGACAGTGCAC+TGG	0.533808	7_4:-52648302	Msa1162150:CDS
TTGTCTTCTTGCACGTGTCA+CGG	0.534246	7_4:+52645893	None:intergenic
ACAATCGACAAATTGATCAA+TGG	0.537895	7_4:+52645716	None:intergenic
ATTGATCAATTTGTCGATTG+TGG	0.540039	7_4:-52645714	Msa1162150:three_prime_UTR
TCTAATTCCTGTCTTGTTTG+GGG	0.542099	7_4:-52650630	Msa1162150:CDS
TGCACGTTTATTGCCTCAAG+TGG	0.543086	7_4:-52648317	Msa1162150:CDS
GTGGTGATGTGGATCTGTGA+AGG	0.546054	7_4:-52645695	Msa1162150:three_prime_UTR
AGTGTTGAAGCTGAGAAGAA+AGG	0.547783	7_4:-52647178	Msa1162150:CDS
AGAAAACATTCTTCGACGAT+AGG	0.548538	7_4:+52649601	None:intergenic
TCATTAGAGTTAAGCTGGTG+AGG	0.549595	7_4:-52648351	Msa1162150:intron
TCAACACTTTGAATCGTTGG+AGG	0.552861	7_4:+52647193	None:intergenic
TTGAGTAAAGGAGTGCATAA+GGG	0.555201	7_4:-52650665	Msa1162150:CDS
ATCCGAGTACCAGAATGAAT+AGG	0.559558	7_4:-52645775	Msa1162150:exon
GCTACATGGACCTCCTGGAA+CGG	0.561064	7_4:-52649577	Msa1162150:CDS
GAAGATAGCACCCTTAATGA+AGG	0.561749	7_4:-52646407	Msa1162150:CDS
TCTCTGCTGTGTAGCAGTGA+CGG	0.565849	7_4:-52652608	Msa1162150:five_prime_UTR
CCATGATAAGTTGATGCATA+CGG	0.567417	7_4:+52647080	None:intergenic
TGGTTTCCAGGGAAGAGAGA+AGG	0.569802	7_4:-52646108	Msa1162150:CDS
ACTACACCTTGCCCAAGAGC+AGG	0.570086	7_4:+52651259	None:intergenic
AAGCACTTGAGGTTGCATGC+TGG	0.573130	7_4:-52647700	Msa1162150:CDS
AGATGTGCTTCCTGCTCACA+AGG	0.573998	7_4:-52651512	Msa1162150:intron
GTTGTCAACAGCAATATTTG+AGG	0.574432	7_4:+52649482	None:intergenic
TCAACAGTTGATGGTTTCCA+GGG	0.576548	7_4:-52646119	Msa1162150:CDS
CAAAGCGATTGGTGCAAAGT+GGG	0.579114	7_4:-52646358	Msa1162150:CDS
ATATCGAGCTCAATTGCCAC+TGG	0.582686	7_4:-52652218	Msa1162150:CDS
ACTGAGACAGTCAGTAGTGA+TGG	0.583432	7_4:-52645852	Msa1162150:CDS
ACATATGCTATATGATCTTG+AGG	0.584159	7_4:-52646821	Msa1162150:CDS
GCATTAATACAGTTGAGTAA+AGG	0.584207	7_4:-52650677	Msa1162150:CDS
ACAGGAATTAGATCAGAAGC+AGG	0.584261	7_4:+52650641	None:intergenic
ACGTTTATTGCCTCAAGTGG+TGG	0.584581	7_4:-52648314	Msa1162150:CDS
AGGTGAATCTGAAGTTGCTA+TGG	0.584771	7_4:-52646387	Msa1162150:CDS
CATATGCTATATGATCTTGA+GGG	0.586034	7_4:-52646820	Msa1162150:CDS
AATATTGACTACTCTGATTG+GGG	0.591227	7_4:-52647783	Msa1162150:CDS
GTAATAATTCCAATATCAGA+AGG	0.592246	7_4:+52646329	None:intergenic
TCACGGCCACATTCATTCGC+CGG	0.592579	7_4:+52645910	None:intergenic
ACTTGAGGCAATAAACGTGC+AGG	0.593915	7_4:+52648319	None:intergenic
ATGGTTTAAACAGTCCCCTA+AGG	0.596876	7_4:-52651070	Msa1162150:CDS
TATGGCTCATGCAAAGCGAT+TGG	0.598071	7_4:-52646369	Msa1162150:CDS
GGACAGTGCACTGGATGCCC+AGG	0.601569	7_4:-52648293	Msa1162150:intron
CAATTGCCACTGGCGCGTCG+AGG	0.601648	7_4:-52652208	Msa1162150:CDS
AATCCTCAATTTGAAGTGTG+TGG	0.602752	7_4:-52652153	Msa1162150:CDS
TGGGCTTTCTGAGTGATCGC+CGG	0.608515	7_4:-52645929	Msa1162150:CDS
TCGTTGGAGGAAGTTGAAGA+TGG	0.608721	7_4:+52647206	None:intergenic
GTTCTGCAAGTCTTTCAAAG+AGG	0.611190	7_4:+52647143	None:intergenic
GTACTTCGAGGAGATAATAG+TGG	0.611245	7_4:-52648192	Msa1162150:CDS
TTGGATACTGCTCAAAAGAG+AGG	0.611264	7_4:-52652182	Msa1162150:CDS
ATTTGTCGATTGTGGTGATG+TGG	0.614205	7_4:-52645706	Msa1162150:three_prime_UTR
AGTGCACTGTCCACCACTTG+AGG	0.617324	7_4:+52648304	None:intergenic
ATGAATTGGTCCAAAGAGAG+AGG	0.618323	7_4:+52652549	None:intergenic
TCATCCAGGTGACATATCAC+AGG	0.621594	7_4:-52650709	Msa1162150:intron
GTAGTGATGGATTTCTAAAG+CGG	0.625610	7_4:-52645839	Msa1162150:CDS
GCAACCAACAGTGTCCAAGA+AGG	0.633180	7_4:-52650603	Msa1162150:CDS
AAACAAGGAGAACTCACTGA+AGG	0.636587	7_4:-52646153	Msa1162150:CDS
TGATCGCCGGCGAATGAATG+TGG	0.638117	7_4:-52645916	Msa1162150:CDS
TACAAGGAGGGAGATACAGA+AGG	0.638444	7_4:-52647882	Msa1162150:CDS
ATCAACATTACCTTCAGCAG+AGG	0.639923	7_4:+52647674	None:intergenic
AACCCTTCTTCTCATAGACA+CGG	0.649534	7_4:-52646770	Msa1162150:CDS
GTAAAATAGTTATACCTGTG+TGG	0.650990	7_4:+52649441	None:intergenic
AGCCGTGTCTATGAGAAGAA+GGG	0.653328	7_4:+52646768	None:intergenic
CTGTTGACAACATCGTTGAG+CGG	0.655801	7_4:-52649470	Msa1162150:CDS
CAAATTCCTCGACGCGCCAG+TGG	0.660691	7_4:+52652202	None:intergenic
TGAATAGGCAAAATTCCCAA+AGG	0.662098	7_4:-52645760	Msa1162150:exon
GTGTCTATGAGAAGAAGGGT+TGG	0.668959	7_4:+52646772	None:intergenic
GGACTCTATCCAGAGAAGAG+CGG	0.669587	7_4:-52647853	Msa1162150:CDS
ATGCTGGATACCTCTGCTGA+AGG	0.673645	7_4:-52647684	Msa1162150:intron
CTGCTGTGTAGCAGTGACGG+AGG	0.687983	7_4:-52652605	Msa1162150:five_prime_UTR
GCAGTGACGGAGGATTACAA+TGG	0.705557	7_4:-52652595	Msa1162150:exon
TTGAGCGGCTAGTTCCACAC+AGG	0.718510	7_4:-52649455	Msa1162150:intron
AAAGCGATTGGTGCAAAGTG+GGG	0.741815	7_4:-52646357	Msa1162150:CDS
ATATTACAAGAAGTGAAACG+TGG	0.747337	7_4:-52649528	Msa1162150:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATCTTTTTCAAATTTATT+TGG	-	chr7_4:52646121-52646140	Msa1162150:CDS	10.0%
!!!	TATCTTTTTCAAATTTATTT+GGG	-	chr7_4:52646122-52646141	Msa1162150:CDS	10.0%
!!	ATAGATAAAAAAGATATTAA+TGG	+	chr7_4:52647956-52647975	None:intergenic	10.0%
!!	TAGTTATTTAATTATGTAAT+AGG	-	chr7_4:52649116-52649135	Msa1162150:intron	10.0%
!!	ATAAATAGAATCATTATAAA+AGG	+	chr7_4:52649735-52649754	None:intergenic	10.0%
!!	TTTGATTATAATGAATTAAA+TGG	-	chr7_4:52650933-52650952	Msa1162150:intron	10.0%
!!!	TTTTTTTTTTTTTTTGCTTC+AGG	-	chr7_4:52645955-52645974	Msa1162150:intron	15.0%
!!	TTGATTTAATTCATTGAAAA+TGG	+	chr7_4:52646826-52646845	None:intergenic	15.0%
!!	TGATAAAATTCATTTAATCT+AGG	+	chr7_4:52648160-52648179	None:intergenic	15.0%
!!	TATTAAAACACTCAAAATTA+CGG	-	chr7_4:52648296-52648315	Msa1162150:CDS	15.0%
!!!	TTTTTTTTTTAGGTATTGAA+TGG	-	chr7_4:52650272-52650291	Msa1162150:intron	15.0%
!!	AATAAAACATAAACTAACAA+AGG	+	chr7_4:52650631-52650650	None:intergenic	15.0%
!!!	TTTTTTAATTTGCTTCATAT+AGG	-	chr7_4:52652185-52652204	Msa1162150:CDS	15.0%
!!!	TTTTTAATTTGCTTCATATA+GGG	-	chr7_4:52652186-52652205	Msa1162150:CDS	15.0%
!!	CTTAAATTCTAAATAGAAAA+AGG	+	chr7_4:52652545-52652564	None:intergenic	15.0%
!!!	CTTTTTCTATTTAGAATTTA+AGG	-	chr7_4:52652543-52652562	Msa1162150:CDS	15.0%
!!	ATTCAAAATTGCAATTAGAT+GGG	+	chr7_4:52645815-52645834	None:intergenic	20.0%
!!	AATTCAAAATTGCAATTAGA+TGG	+	chr7_4:52645816-52645835	None:intergenic	20.0%
!!!	ATCTAATTGCAATTTTGAAT+TGG	-	chr7_4:52645815-52645834	Msa1162150:CDS	20.0%
!!!	TCTAATTGCAATTTTGAATT+GGG	-	chr7_4:52645816-52645835	Msa1162150:CDS	20.0%
!!	AGTTTCAAACTTTCAAAAAA+TGG	-	chr7_4:52645869-52645888	Msa1162150:CDS	20.0%
!!	AACTTTCAAAAAATGGTTAA+TGG	-	chr7_4:52645876-52645895	Msa1162150:CDS	20.0%
!!	ACTTTCAAAAAATGGTTAAT+GGG	-	chr7_4:52645877-52645896	Msa1162150:CDS	20.0%
!!	TTTCAAATTTATTTGGGAAA+AGG	-	chr7_4:52646128-52646147	Msa1162150:CDS	20.0%
!!	TGTAGTAGTAACAATAAAAT+TGG	-	chr7_4:52646193-52646212	Msa1162150:intron	20.0%
!!!	TTTTCAGAATAAACAACAAA+GGG	+	chr7_4:52646622-52646641	None:intergenic	20.0%
!!!	ATTTTCAGAATAAACAACAA+AGG	+	chr7_4:52646623-52646642	None:intergenic	20.0%
!!	CAAGTTAAATTAATATCCAA+AGG	+	chr7_4:52647050-52647069	None:intergenic	20.0%
!!!	TCTTGTATAGAATAGTTTTA+TGG	-	chr7_4:52647219-52647238	Msa1162150:CDS	20.0%
!!!	GTGATCAAGATTTTTATTAA+TGG	+	chr7_4:52647642-52647661	None:intergenic	20.0%
!!	GTGTTATATAATTTCTTTCT+TGG	-	chr7_4:52647670-52647689	Msa1162150:intron	20.0%
!!	AAAATTCTTAGCTGATTAAT+AGG	+	chr7_4:52648257-52648276	None:intergenic	20.0%
!!	AAATTCAGAGAAATTCAATA+TGG	+	chr7_4:52649983-52650002	None:intergenic	20.0%
!!	TTTCTCTGAATTTACAATTT+AGG	-	chr7_4:52649990-52650009	Msa1162150:intron	20.0%
!!!	CGTAACATGTTTTTTTTTTT+AGG	-	chr7_4:52650262-52650281	Msa1162150:intron	20.0%
!!	AAACCAAAGAAAAAAATACA+AGG	-	chr7_4:52650306-52650325	Msa1162150:intron	20.0%
!!!	TGTTAGTTTATGTTTTATTG+CGG	-	chr7_4:52650632-52650651	Msa1162150:CDS	20.0%
!!	TTGTTGGATATTATTATTAG+TGG	+	chr7_4:52650683-52650702	None:intergenic	20.0%
!!	AATATCATACTTAACTGAAT+TGG	-	chr7_4:52650756-52650775	Msa1162150:intron	20.0%
!!	ATTATAATCAAAGAGACATT+TGG	+	chr7_4:52650925-52650944	None:intergenic	20.0%
!!	GATTATAATGAATTAAATGG+AGG	-	chr7_4:52650936-52650955	Msa1162150:intron	20.0%
!	TGAAAGTTGGAAACTTTAAT+CGG	+	chr7_4:52645750-52645769	None:intergenic	25.0%
!	AGAACGTAAAATGAGATAAA+GGG	+	chr7_4:52645777-52645796	None:intergenic	25.0%
!	AAGAACGTAAAATGAGATAA+AGG	+	chr7_4:52645778-52645797	None:intergenic	25.0%
!	CAATTAGATGGGAAAAAAAT+AGG	+	chr7_4:52645804-52645823	None:intergenic	25.0%
!	CTTTCAAAAAATGGTTAATG+GGG	-	chr7_4:52645878-52645897	Msa1162150:CDS	25.0%
!	AAAGAAGAATAGGAAAAATG+TGG	+	chr7_4:52646089-52646108	None:intergenic	25.0%
!!!	ATTATGATTTCTGAAGCAAA+TGG	-	chr7_4:52646248-52646267	Msa1162150:intron	25.0%
!!	CTAGGTTTATAGTTGATTTA+CGG	-	chr7_4:52646273-52646292	Msa1162150:intron	25.0%
!	TCAAATAAATCAATCCAAAC+AGG	+	chr7_4:52646299-52646318	None:intergenic	25.0%
!!	ACTATTTTCATAAGCTATCT+TGG	+	chr7_4:52646424-52646443	None:intergenic	25.0%
!	AACTTACAACTTAAATGCAT+AGG	+	chr7_4:52646563-52646582	None:intergenic	25.0%
!!	AAGTTGAGCTTTAATTCATA+AGG	-	chr7_4:52646578-52646597	Msa1162150:intron	25.0%
!!	TGTTTATTCTGAAAATAGAC+AGG	-	chr7_4:52646627-52646646	Msa1162150:intron	25.0%
!!	GTTTATTCTGAAAATAGACA+GGG	-	chr7_4:52646628-52646647	Msa1162150:intron	25.0%
!!	CACAAGATGATTTTCTTTTA+TGG	+	chr7_4:52646784-52646803	None:intergenic	25.0%
!	CATAAAAGAAAATCATCTTG+TGG	-	chr7_4:52646782-52646801	Msa1162150:CDS	25.0%
!	ATTAACTCCTGAAAGTAATA+CGG	+	chr7_4:52646851-52646870	None:intergenic	25.0%
!!!	TGTTGTTTTAAAACTCAACA+AGG	-	chr7_4:52646908-52646927	Msa1162150:intron	25.0%
!!!	TGGATATTAATTTAACTTGC+TGG	-	chr7_4:52647051-52647070	Msa1162150:CDS	25.0%
!	TCAATTACTACAATGACATT+CGG	-	chr7_4:52647258-52647277	Msa1162150:intron	25.0%
!	GTTTAAAAATAATCCAGTTG+AGG	+	chr7_4:52647803-52647822	None:intergenic	25.0%
!!	AACTTATGATAATGATCTCA+AGG	-	chr7_4:52647820-52647839	Msa1162150:CDS	25.0%
!	TTAAATTGCGACATGTATTT+AGG	-	chr7_4:52648114-52648133	Msa1162150:intron	25.0%
!	CAAAATTACGGATACAATAA+TGG	-	chr7_4:52648308-52648327	Msa1162150:CDS	25.0%
!	TAATCACACTAAATCTTGTT+AGG	-	chr7_4:52648429-52648448	Msa1162150:intron	25.0%
!	ACACCATTATTGTGATAATA+GGG	+	chr7_4:52648480-52648499	None:intergenic	25.0%
!	AACACCATTATTGTGATAAT+AGG	+	chr7_4:52648481-52648500	None:intergenic	25.0%
!!	ATAAATGATTTTGCAAACAC+AGG	+	chr7_4:52648543-52648562	None:intergenic	25.0%
!!	CAGAAAAGAAGTTTAAAATG+TGG	-	chr7_4:52649020-52649039	Msa1162150:intron	25.0%
!!	CACTCTAGAAGAAAATTATA+CGG	-	chr7_4:52649049-52649068	Msa1162150:intron	25.0%
!	TGTAATAGGACAATTATATG+TGG	-	chr7_4:52649130-52649149	Msa1162150:intron	25.0%
!	GTAATAGGACAATTATATGT+GGG	-	chr7_4:52649131-52649150	Msa1162150:intron	25.0%
!!!	CACTTAATTTATTTTCGTGT+TGG	+	chr7_4:52649325-52649344	None:intergenic	25.0%
!	TAAACAGGATAGAATTAGAA+AGG	-	chr7_4:52649385-52649404	Msa1162150:intron	25.0%
!!!	ATCATCATTATTTTGTCAAG+AGG	+	chr7_4:52649689-52649708	None:intergenic	25.0%
!!!	TTGTTATTTTTCTCATTCTG+TGG	-	chr7_4:52649759-52649778	Msa1162150:intron	25.0%
!	CTTAACTCTAATGAAAATGT+TGG	+	chr7_4:52649847-52649866	None:intergenic	25.0%
!!	TTGTCATTGATGATTTATGT+CGG	-	chr7_4:52650183-52650202	Msa1162150:intron	25.0%
!	CAAAGAAAAAAATACAAGGA+GGG	-	chr7_4:52650310-52650329	Msa1162150:intron	25.0%
!!	TAATATTGACTACTCTGATT+GGG	-	chr7_4:52650420-52650439	Msa1162150:intron	25.0%
!!!	AGACAAGTGCTTTTAAAATT+AGG	+	chr7_4:52651187-52651206	None:intergenic	25.0%
!!!	TTGCTCTTTAGTAGTTTTTT+TGG	+	chr7_4:52651249-52651268	None:intergenic	25.0%
!	ACTGAATAGTCAGATTATAT+TGG	-	chr7_4:52651284-52651303	Msa1162150:CDS	25.0%
!	CTGAATAGTCAGATTATATT+GGG	-	chr7_4:52651285-52651304	Msa1162150:CDS	25.0%
!	TGAATAGTCAGATTATATTG+GGG	-	chr7_4:52651286-52651305	Msa1162150:CDS	25.0%
!	AATCATTATATACGACATGA+TGG	+	chr7_4:52651580-52651599	None:intergenic	25.0%
!	TCATGTCGTATATAATGATT+TGG	-	chr7_4:52651580-52651599	Msa1162150:intron	25.0%
!	TGTTTGGTAAAACTCTTATA+CGG	+	chr7_4:52651633-52651652	None:intergenic	25.0%
!	GTAATAATTCCAATATCAGA+AGG	+	chr7_4:52651878-52651897	None:intergenic	25.0%
!	AACATTTACTATGAATGTTG+TGG	-	chr7_4:52651940-52651959	Msa1162150:intron	25.0%
!	ACATTTACTATGAATGTTGT+GGG	-	chr7_4:52651941-52651960	Msa1162150:intron	25.0%
!!!	AAGATGGTAAATGTTGTTTT+TGG	-	chr7_4:52652002-52652021	Msa1162150:intron	25.0%
!	ACTGAAGATGTTAAAAAACA+AGG	-	chr7_4:52652036-52652055	Msa1162150:intron	25.0%
!	TCGAACCATTGATATAATAA+TGG	+	chr7_4:52652125-52652144	None:intergenic	25.0%
!!!	ATGTGACAAATTTGTTAGTA+TGG	-	chr7_4:52652212-52652231	Msa1162150:CDS	25.0%
!!!	ATTGAATATTTTGAAGAGCA+TGG	-	chr7_4:52652391-52652410	Msa1162150:intron	25.0%
!	ATAACAAGAAGAGACTAAAA+TGG	+	chr7_4:52652600-52652619	None:intergenic	25.0%
!	CTTTAATCGGAGTTTTTGAA+TGG	+	chr7_4:52645737-52645756	None:intergenic	30.0%
	TCAGAAAAGATGATGAATCA+TGG	-	chr7_4:52645906-52645925	Msa1162150:CDS	30.0%
	CAGAAACAAGAAAGAAGAAT+AGG	+	chr7_4:52646099-52646118	None:intergenic	30.0%
	ATTTATTTGAGCTTAGCTAC+TGG	-	chr7_4:52646309-52646328	Msa1162150:intron	30.0%
!!!	ATAAGTTTTCTGAGACTGTT+TGG	-	chr7_4:52646333-52646352	Msa1162150:CDS	30.0%
!!!	TAAGTTTTCTGAGACTGTTT+GGG	-	chr7_4:52646334-52646353	Msa1162150:CDS	30.0%
	TTATTTGCAGCTTATAACAC+TGG	+	chr7_4:52646506-52646525	None:intergenic	30.0%
	TCTTCTGTTCAATATCAAAC+TGG	-	chr7_4:52646742-52646761	Msa1162150:intron	30.0%
!	AATGGTCTTAATCCTTATCA+GGG	+	chr7_4:52646808-52646827	None:intergenic	30.0%
!	AAATGGTCTTAATCCTTATC+AGG	+	chr7_4:52646809-52646828	None:intergenic	30.0%
!!!	GATTTTTTGTTGTTGCAGTT+TGG	-	chr7_4:52646873-52646892	Msa1162150:intron	30.0%
	AGGTGTAGTTTACAGATTAA+AGG	-	chr7_4:52646959-52646978	Msa1162150:intron	30.0%
!	TTTGATGATATACCAGAAGA+TGG	-	chr7_4:52647115-52647134	Msa1162150:CDS	30.0%
	CTAATAAGAACTTACTGTGA+AGG	-	chr7_4:52647331-52647350	Msa1162150:intron	30.0%
!!!	GATATATTTTTTGCTCATCC+AGG	-	chr7_4:52647481-52647500	Msa1162150:intron	30.0%
	GCATTAATACAGTTGAGTAA+AGG	-	chr7_4:52647527-52647546	Msa1162150:intron	30.0%
!!	ATCTAATTCCTGTCTTGTTT+GGG	-	chr7_4:52647573-52647592	Msa1162150:intron	30.0%
	TAAAAATCTTGATCACTCTC+AGG	-	chr7_4:52647646-52647665	Msa1162150:intron	30.0%
	ATTATAATTAAGGCCTCAAC+TGG	-	chr7_4:52647787-52647806	Msa1162150:CDS	30.0%
	ATGATCTCAAGGAATAATAC+AGG	-	chr7_4:52647831-52647850	Msa1162150:CDS	30.0%
	TGATCTCAAGGAATAATACA+GGG	-	chr7_4:52647832-52647851	Msa1162150:CDS	30.0%
	GACATGTATTTAGAAAAGGA+GGG	+	chr7_4:52647894-52647913	None:intergenic	30.0%
!	CTCCTTTTCTAAATACATGT+CGG	-	chr7_4:52647893-52647912	Msa1162150:CDS	30.0%
	TAATGGTCTAAGTTGTGTAT+TGG	+	chr7_4:52647939-52647958	None:intergenic	30.0%
	ATTAGTTGGTTGGAAATAAG+TGG	-	chr7_4:52648230-52648249	Msa1162150:intron	30.0%
	TAACTACAGAGTAATAGATG+GGG	+	chr7_4:52648371-52648390	None:intergenic	30.0%
	CTAACTACAGAGTAATAGAT+GGG	+	chr7_4:52648372-52648391	None:intergenic	30.0%
	CATCTATTACTCTGTAGTTA+GGG	-	chr7_4:52648371-52648390	Msa1162150:intron	30.0%
	ATCTATTACTCTGTAGTTAG+GGG	-	chr7_4:52648372-52648391	Msa1162150:intron	30.0%
	ACTGAATATACACTGTTCTT+TGG	-	chr7_4:52648395-52648414	Msa1162150:intron	30.0%
	GATCCCTATTATCACAATAA+TGG	-	chr7_4:52648474-52648493	Msa1162150:intron	30.0%
!!	ATCATTTTTCTTTGCACATC+TGG	-	chr7_4:52648517-52648536	Msa1162150:intron	30.0%
	TTGGAAATTGCATCTTTCTT+TGG	+	chr7_4:52648580-52648599	None:intergenic	30.0%
!	AAGAATGTTTTCTTGCTACA+TGG	-	chr7_4:52648613-52648632	Msa1162150:intron	30.0%
	ATATTACAAGAAGTGAAACG+TGG	-	chr7_4:52648676-52648695	Msa1162150:intron	30.0%
	GTAAAATAGTTATACCTGTG+TGG	+	chr7_4:52648766-52648785	None:intergenic	30.0%
	AGAAGTAAAATATGCCAATG+AGG	+	chr7_4:52648823-52648842	None:intergenic	30.0%
	TGGAAAATTGTTCACAGAAT+TGG	-	chr7_4:52648911-52648930	Msa1162150:intron	30.0%
	TTATATGTGGGATAGTTATG+TGG	-	chr7_4:52649143-52649162	Msa1162150:intron	30.0%
	AAGTCTCAAATGTGAGAAAA+TGG	+	chr7_4:52649256-52649275	None:intergenic	30.0%
!!	ATTTTCTCACATTTGAGACT+TGG	-	chr7_4:52649255-52649274	Msa1162150:intron	30.0%
!	TCTACCATCTTTTCTACTAT+AGG	+	chr7_4:52649446-52649465	None:intergenic	30.0%
	GGATCTAGAGATAAATGAAT+TGG	-	chr7_4:52649603-52649622	Msa1162150:CDS	30.0%
	AAATGAATTGGAGAAAGACA+TGG	-	chr7_4:52649615-52649634	Msa1162150:CDS	30.0%
!	ATGGTTTTTGATAGAATGCT+AGG	-	chr7_4:52649634-52649653	Msa1162150:intron	30.0%
	ATGAGTATTAAGTACACACT+TGG	+	chr7_4:52649815-52649834	None:intergenic	30.0%
!	CATTTTCATTAGAGTTAAGC+TGG	-	chr7_4:52649848-52649867	Msa1162150:intron	30.0%
	CAGAGAAATTCAATATGGAA+GGG	+	chr7_4:52649978-52649997	None:intergenic	30.0%
	TCAGAGAAATTCAATATGGA+AGG	+	chr7_4:52649979-52649998	None:intergenic	30.0%
	TTTACAATTTAGGTACTTCG+AGG	-	chr7_4:52650000-52650019	Msa1162150:intron	30.0%
!!!	CCTCCTTGTATTTTTTTCTT+TGG	+	chr7_4:52650312-52650331	None:intergenic	30.0%
	CCAAAGAAAAAAATACAAGG+AGG	-	chr7_4:52650309-52650328	Msa1162150:intron	30.0%
!	GTAATATTGACTACTCTGAT+TGG	-	chr7_4:52650419-52650438	Msa1162150:intron	30.0%
!	AATATTGACTACTCTGATTG+GGG	-	chr7_4:52650421-52650440	Msa1162150:intron	30.0%
!	AAAACAAAGTTGCTTTGAAC+TGG	-	chr7_4:52650819-52650838	Msa1162150:intron	30.0%
	TTTAATGTTGAATCAAGCAC+AGG	+	chr7_4:52650869-52650888	None:intergenic	30.0%
	TAAAGAGCTTTACAACAGTA+AGG	-	chr7_4:52651157-52651176	Msa1162150:intron	30.0%
	ACATATGCTATATGATCTTG+AGG	-	chr7_4:52651383-52651402	Msa1162150:intron	30.0%
	CATATGCTATATGATCTTGA+GGG	-	chr7_4:52651384-52651403	Msa1162150:intron	30.0%
	ATATAATGACTTTCTCTCTC+CGG	+	chr7_4:52651676-52651695	None:intergenic	30.0%
	TTCAGATTCACCTTCATTAA+GGG	+	chr7_4:52651810-52651829	None:intergenic	30.0%
	TACAGAACAATTCTATACCT+GGG	+	chr7_4:52651912-52651931	None:intergenic	30.0%
!!	ACGTTTTAGTAGTTTTACGA+AGG	-	chr7_4:52651974-52651993	Msa1162150:intron	30.0%
	ATTGAAATCTCAACAGTTGA+TGG	-	chr7_4:52652076-52652095	Msa1162150:intron	30.0%
	GGAAGCCATTATTATATCAA+TGG	-	chr7_4:52652117-52652136	Msa1162150:intron	30.0%
	GGTTCGATCAAATTCAAAAA+AGG	-	chr7_4:52652138-52652157	Msa1162150:intron	30.0%
	TCGATCAAATTCAAAAAAGG+AGG	-	chr7_4:52652141-52652160	Msa1162150:intron	30.0%
	AAAATTCCCAAAGGTTGTTA+AGG	-	chr7_4:52652453-52652472	Msa1162150:intron	30.0%
	ACAATCGACAAATTGATCAA+TGG	+	chr7_4:52652491-52652510	None:intergenic	30.0%
!	ATTGATCAATTTGTCGATTG+TGG	-	chr7_4:52652490-52652509	Msa1162150:intron	30.0%
	GGGTTGTAATAGAGATGAAT+TGG	+	chr7_4:52645672-52645691	None:intergenic	35.0%
	TTTGAATGGTGAATGCAAGA+AGG	+	chr7_4:52645723-52645742	None:intergenic	35.0%
!!	GATAAAGGGTATCTGAAAGT+TGG	+	chr7_4:52645763-52645782	None:intergenic	35.0%
!	AATCCTCAATTTGAAGTGTG+TGG	-	chr7_4:52646051-52646070	Msa1162150:intron	35.0%
	TGCATAGGAAAACATGAACA+AGG	+	chr7_4:52646548-52646567	None:intergenic	35.0%
	TCAGAATAAACAACAAAGGG+AGG	+	chr7_4:52646619-52646638	None:intergenic	35.0%
	TGAAAATAGACAGGGCTTAT+GGG	-	chr7_4:52646636-52646655	Msa1162150:intron	35.0%
	ATCAATGCCGTATTACTTTC+AGG	-	chr7_4:52646841-52646860	Msa1162150:CDS	35.0%
!	AAACTCAACAAGGCTGATTT+AGG	-	chr7_4:52646918-52646937	Msa1162150:intron	35.0%
	AAAAAAATTGCCCATGCTGT+TGG	-	chr7_4:52647009-52647028	Msa1162150:intron	35.0%
	GGTTTGATACAATTGCTAAC+AGG	-	chr7_4:52647072-52647091	Msa1162150:CDS	35.0%
	AACAATAAGTGCCTAAGATC+AGG	+	chr7_4:52647196-52647215	None:intergenic	35.0%
!	GAAGGTTTGAATCTTGCTTT+TGG	-	chr7_4:52647349-52647368	Msa1162150:intron	35.0%
	TAAAATCAATTACTTGCCCC+TGG	-	chr7_4:52647444-52647463	Msa1162150:intron	35.0%
	AAAATCAATTACTTGCCCCT+GGG	-	chr7_4:52647445-52647464	Msa1162150:intron	35.0%
!	TTGAGTAAAGGAGTGCATAA+GGG	-	chr7_4:52647539-52647558	Msa1162150:intron	35.0%
!	GATCTAATTCCTGTCTTGTT+TGG	-	chr7_4:52647572-52647591	Msa1162150:intron	35.0%
!!	TCTAATTCCTGTCTTGTTTG+GGG	-	chr7_4:52647574-52647593	Msa1162150:intron	35.0%
	GATCTCAAGGAATAATACAG+GGG	-	chr7_4:52647833-52647852	Msa1162150:CDS	35.0%
	CGACATGTATTTAGAAAAGG+AGG	+	chr7_4:52647895-52647914	None:intergenic	35.0%
	CTCCGACATGTATTTAGAAA+AGG	+	chr7_4:52647898-52647917	None:intergenic	35.0%
	TTGCGACATGTATTTAGGAA+CGG	-	chr7_4:52648119-52648138	Msa1162150:intron	35.0%
	AACATGCTCTGCATATTAGT+TGG	-	chr7_4:52648216-52648235	Msa1162150:intron	35.0%
	CCTAACTACAGAGTAATAGA+TGG	+	chr7_4:52648373-52648392	None:intergenic	35.0%
	CCATCTATTACTCTGTAGTT+AGG	-	chr7_4:52648370-52648389	Msa1162150:intron	35.0%
	GAAAACATTCTTCGACGATA+GGG	+	chr7_4:52648605-52648624	None:intergenic	35.0%
	AGAAAACATTCTTCGACGAT+AGG	+	chr7_4:52648606-52648625	None:intergenic	35.0%
	GTTGTCAACAGCAATATTTG+AGG	+	chr7_4:52648725-52648744	None:intergenic	35.0%
	TTATCATAGCAGCAAAGAGA+TGG	+	chr7_4:52648788-52648807	None:intergenic	35.0%
	CTCTTTGCTGCTATGATAAT+TGG	-	chr7_4:52648789-52648808	Msa1162150:intron	35.0%
!	TTCTGTGAACAATTTTCCAC+AGG	+	chr7_4:52648910-52648929	None:intergenic	35.0%
	CACTGACAAACTTAAAGAGT+AGG	+	chr7_4:52648967-52648986	None:intergenic	35.0%
	GGCAAATATGTAACTGTAAG+CGG	-	chr7_4:52649164-52649183	Msa1162150:intron	35.0%
	AAATATGTAACTGTAAGCGG+CGG	-	chr7_4:52649167-52649186	Msa1162150:intron	35.0%
	AATTAAGTGTAGCAGAGATG+AGG	-	chr7_4:52649336-52649355	Msa1162150:intron	35.0%
	GATGTGTAGTAAGACTAAAC+AGG	-	chr7_4:52649370-52649389	Msa1162150:intron	35.0%
	AGCACCTATAGTAGAAAAGA+TGG	-	chr7_4:52649439-52649458	Msa1162150:intron	35.0%
	AGATGGTAGAAACTAGACTT+AGG	-	chr7_4:52649456-52649475	Msa1162150:CDS	35.0%
	AAACTAGACTTAGGTGGTTT+GGG	-	chr7_4:52649465-52649484	Msa1162150:CDS	35.0%
	CATAAGAGAAGCTATCAAGA+AGG	-	chr7_4:52649582-52649601	Msa1162150:CDS	35.0%
	TGACATTCGGAAAGAAATGA+AGG	-	chr7_4:52650044-52650063	Msa1162150:intron	35.0%
	TTCGGAAAGAAATGAAGGTA+AGG	-	chr7_4:52650049-52650068	Msa1162150:intron	35.0%
	AGTATTGCCAAGTTTCTTAG+AGG	+	chr7_4:52650450-52650469	None:intergenic	35.0%
	ATATCATTGAGTGTAGTGTG+AGG	+	chr7_4:52650557-52650576	None:intergenic	35.0%
	GGAGGAATGAACTATATTGT+TGG	+	chr7_4:52650699-52650718	None:intergenic	35.0%
	ATCAATTCCAGGACACTTAT+TGG	+	chr7_4:52650720-52650739	None:intergenic	35.0%
	TATCATGTTGCATCAATTCC+AGG	+	chr7_4:52650731-52650750	None:intergenic	35.0%
!!!	AAATGGAGGTCCTTGTTTTT+AGG	-	chr7_4:52650950-52650969	Msa1162150:intron	35.0%
!!!	AATGGAGGTCCTTGTTTTTA+GGG	-	chr7_4:52650951-52650970	Msa1162150:intron	35.0%
	CATCTTGTACCCTAAAAACA+AGG	+	chr7_4:52650963-52650982	None:intergenic	35.0%
	TTCTGCAAGTCTTTCAAAGA+GGG	+	chr7_4:52651063-52651082	None:intergenic	35.0%
!!	CCATGATAAGTTGATGCATA+CGG	+	chr7_4:52651127-52651146	None:intergenic	35.0%
	TGCATCAACTTATCATGGAT+TGG	-	chr7_4:52651129-52651148	Msa1162150:intron	35.0%
!	TGGGGAGATAAACATTTTGT+TGG	-	chr7_4:52651304-52651323	Msa1162150:CDS	35.0%
!	TTTTGTTGGATCTTCATGCA+TGG	-	chr7_4:52651318-52651337	Msa1162150:intron	35.0%
	CACATATCAGTTCAGTTGTT+TGG	+	chr7_4:52651649-52651668	None:intergenic	35.0%
	CAAACAACTGAACTGATATG+TGG	-	chr7_4:52651647-52651666	Msa1162150:intron	35.0%
	TGATTGTGTCAGATGTGATA+TGG	-	chr7_4:52651757-52651776	Msa1162150:intron	35.0%
	CTTCAGATTCACCTTCATTA+AGG	+	chr7_4:52651811-52651830	None:intergenic	35.0%
	CTACAGAACAATTCTATACC+TGG	+	chr7_4:52651913-52651932	None:intergenic	35.0%
	CAGGTATAGAATTGTTCTGT+AGG	-	chr7_4:52651911-52651930	Msa1162150:intron	35.0%
	ATAGAATTGTTCTGTAGGTG+TGG	-	chr7_4:52651916-52651935	Msa1162150:intron	35.0%
	TAGAATTGTTCTGTAGGTGT+GGG	-	chr7_4:52651917-52651936	Msa1162150:intron	35.0%
!	TTTTACGAAGGATGACAAGA+TGG	-	chr7_4:52651986-52652005	Msa1162150:intron	35.0%
!!!	TGGTAAATGTTGTTTTTGGC+AGG	-	chr7_4:52652006-52652025	Msa1162150:intron	35.0%
	GAGACTTGAATATACGTTTC+AGG	-	chr7_4:52652252-52652271	Msa1162150:intron	35.0%
	ACTTGAATATACGTTTCAGG+TGG	-	chr7_4:52652255-52652274	Msa1162150:intron	35.0%
!	CTTGAATATACGTTTCAGGT+GGG	-	chr7_4:52652256-52652275	Msa1162150:intron	35.0%
!!	GTAGTGATGGATTTCTAAAG+CGG	-	chr7_4:52652365-52652384	Msa1162150:intron	35.0%
!	GGAATTTTGCCTATTCATTC+TGG	+	chr7_4:52652441-52652460	None:intergenic	35.0%
	TGAATAGGCAAAATTCCCAA+AGG	-	chr7_4:52652444-52652463	Msa1162150:intron	35.0%
	TGCATTTCTCTAACGTTCAC+TGG	-	chr7_4:52645554-52645573	Msa1162150:three_prime_UTR	40.0%
	ATGAATTGGTCCAAAGAGAG+AGG	+	chr7_4:52645658-52645677	None:intergenic	40.0%
	TTGGATACTGCTCAAAAGAG+AGG	-	chr7_4:52646022-52646041	Msa1162150:intron	40.0%
	CATCCACACACTTCAAATTG+AGG	+	chr7_4:52646057-52646076	None:intergenic	40.0%
!	TTTGAAGTGTGTGGATGTTC+AGG	-	chr7_4:52646060-52646079	Msa1162150:intron	40.0%
	CACGTGTGTGTGTAATTTGA+TGG	-	chr7_4:52646162-52646181	Msa1162150:CDS	40.0%
!!	TTTCTGAAGCAAATGGAGCT+AGG	-	chr7_4:52646255-52646274	Msa1162150:intron	40.0%
!	TAGTTGATTTACGGCCTGTT+TGG	-	chr7_4:52646282-52646301	Msa1162150:intron	40.0%
	AACATGAACAAGGCTCTGTT+TGG	+	chr7_4:52646538-52646557	None:intergenic	40.0%
	CTGAAAATAGACAGGGCTTA+TGG	-	chr7_4:52646635-52646654	Msa1162150:intron	40.0%
!	ATTTAGGTTCTCCTGCTCTT+GGG	-	chr7_4:52646934-52646953	Msa1162150:intron	40.0%
	GGACTGTTTAAACCATCTTC+TGG	+	chr7_4:52647130-52647149	None:intergenic	40.0%
	ATGGTTTAAACAGTCCCCTA+AGG	-	chr7_4:52647134-52647153	Msa1162150:CDS	40.0%
!!	TGCAACTTTTTCCAGCCTTA+GGG	+	chr7_4:52647152-52647171	None:intergenic	40.0%
!!	TTGCAACTTTTTCCAGCCTT+AGG	+	chr7_4:52647153-52647172	None:intergenic	40.0%
	GCTGGAAAAAGTTGCAAATG+AGG	-	chr7_4:52647156-52647175	Msa1162150:CDS	40.0%
	GCTGATAAGTTCCTGATCTT+AGG	-	chr7_4:52647182-52647201	Msa1162150:CDS	40.0%
	ATCCCGTATATAAGAACCCA+GGG	+	chr7_4:52647464-52647483	None:intergenic	40.0%
	TATCCCGTATATAAGAACCC+AGG	+	chr7_4:52647465-52647484	None:intergenic	40.0%
!	GTTGAGTAAAGGAGTGCATA+AGG	-	chr7_4:52647538-52647557	Msa1162150:intron	40.0%
	ACAGGAATTAGATCAGAAGC+AGG	+	chr7_4:52647566-52647585	None:intergenic	40.0%
	AGTGAAAGCTACATCCTTCT+TGG	+	chr7_4:52647618-52647637	None:intergenic	40.0%
	GACATGTATTTAGGAACGGA+GGG	-	chr7_4:52648123-52648142	Msa1162150:intron	40.0%
	TGCTCTGCATATTAGTTGGT+TGG	-	chr7_4:52648220-52648239	Msa1162150:intron	40.0%
	AACGGGAAAAACTACAACAG+TGG	-	chr7_4:52648645-52648664	Msa1162150:intron	40.0%
	TTGCTGCTATGATAATTGGC+TGG	-	chr7_4:52648793-52648812	Msa1162150:intron	40.0%
!!	AATTGGCTGGTTTACCTCAT+TGG	-	chr7_4:52648806-52648825	Msa1162150:intron	40.0%
!	GTGAACAATTTTCCACAGGA+GGG	+	chr7_4:52648906-52648925	None:intergenic	40.0%
!	TGTGAACAATTTTCCACAGG+AGG	+	chr7_4:52648907-52648926	None:intergenic	40.0%
!!	ACATTTGAGACTTGGCTCTA+AGG	-	chr7_4:52649263-52649282	Msa1162150:intron	40.0%
	GCAAGGTGTATCTACTAGAT+TGG	-	chr7_4:52649292-52649311	Msa1162150:intron	40.0%
	ATTAGAGAGAGAGAGAGAGT+TGG	-	chr7_4:52649413-52649432	Msa1162150:intron	40.0%
	TTAGAGAGAGAGAGAGAGTT+GGG	-	chr7_4:52649414-52649433	Msa1162150:intron	40.0%
	TGGTAGAAACTAGACTTAGG+TGG	-	chr7_4:52649459-52649478	Msa1162150:CDS	40.0%
	GAAACTAGACTTAGGTGGTT+TGG	-	chr7_4:52649464-52649483	Msa1162150:CDS	40.0%
	GACTTGTGGATTCTGTAGTA+TGG	-	chr7_4:52649501-52649520	Msa1162150:CDS	40.0%
	TGTAGTATGGAGAGTAGATC+AGG	-	chr7_4:52649514-52649533	Msa1162150:CDS	40.0%
	CAAGAGGAAGAACTTTGACA+GGG	+	chr7_4:52649673-52649692	None:intergenic	40.0%
	TCAAGAGGAAGAACTTTGAC+AGG	+	chr7_4:52649674-52649693	None:intergenic	40.0%
	TGGTGAGACATGTTCATACT+TGG	-	chr7_4:52649779-52649798	Msa1162150:intron	40.0%
	TCATTAGAGTTAAGCTGGTG+AGG	-	chr7_4:52649853-52649872	Msa1162150:intron	40.0%
	AGTATGACAAGTGTGTACCT+GGG	+	chr7_4:52649931-52649950	None:intergenic	40.0%
	AAGTATGACAAGTGTGTACC+TGG	+	chr7_4:52649932-52649951	None:intergenic	40.0%
	CACACTTGTCATACTTGTCA+TGG	-	chr7_4:52649936-52649955	Msa1162150:intron	40.0%
	GTACTTCGAGGAGATAATAG+TGG	-	chr7_4:52650012-52650031	Msa1162150:intron	40.0%
	CCAGGCGACACTAATAATAT+TGG	+	chr7_4:52650136-52650155	None:intergenic	40.0%
	CCAATATTATTAGTGTCGCC+TGG	-	chr7_4:52650133-52650152	Msa1162150:intron	40.0%
	TACGCACTGTGAAAACTGAA+AGG	+	chr7_4:52650246-52650265	None:intergenic	40.0%
	ATCAACATTACCTTCAGCAG+AGG	+	chr7_4:52650533-52650552	None:intergenic	40.0%
	AATTCCAGGACACTTATTGG+AGG	+	chr7_4:52650717-52650736	None:intergenic	40.0%
	GGTACAAGATGTATACTTGC+AGG	-	chr7_4:52650972-52650991	Msa1162150:intron	40.0%
	TCAACACTTTGAATCGTTGG+AGG	+	chr7_4:52651014-52651033	None:intergenic	40.0%
	GCTTCAACACTTTGAATCGT+TGG	+	chr7_4:52651017-52651036	None:intergenic	40.0%
!	AGTGTTGAAGCTGAGAAGAA+AGG	-	chr7_4:52651026-52651045	Msa1162150:intron	40.0%
	GTTCTGCAAGTCTTTCAAAG+AGG	+	chr7_4:52651064-52651083	None:intergenic	40.0%
	GAAAGACTTGCAGAACTGTA+TGG	-	chr7_4:52651068-52651087	Msa1162150:CDS	40.0%
!!	TAAGTTGATGCATACGGTAC+TGG	+	chr7_4:52651121-52651140	None:intergenic	40.0%
	CCGTATGCATCAACTTATCA+TGG	-	chr7_4:52651124-52651143	Msa1162150:intron	40.0%
	CACTATGTGATAACAGGTCA+AGG	-	chr7_4:52651341-52651360	Msa1162150:intron	40.0%
	AACCCTTCTTCTCATAGACA+CGG	-	chr7_4:52651434-52651453	Msa1162150:intron	40.0%
	GAAGATAGCACCCTTAATGA+AGG	-	chr7_4:52651797-52651816	Msa1162150:intron	40.0%
!	AGGTGAATCTGAAGTTGCTA+TGG	-	chr7_4:52651817-52651836	Msa1162150:intron	40.0%
	AAACAAGGAGAACTCACTGA+AGG	-	chr7_4:52652051-52652070	Msa1162150:intron	40.0%
!!	TCAACAGTTGATGGTTTCCA+GGG	-	chr7_4:52652085-52652104	Msa1162150:intron	40.0%
	ATCCGAGTACCAGAATGAAT+AGG	-	chr7_4:52652429-52652448	Msa1162150:intron	40.0%
	TGCCTATTCATTCTGGTACT+CGG	+	chr7_4:52652434-52652453	None:intergenic	40.0%
	CAGCAACCTTAACAACCTTT+GGG	+	chr7_4:52652462-52652481	None:intergenic	40.0%
	ACAGCAACCTTAACAACCTT+TGG	+	chr7_4:52652463-52652482	None:intergenic	40.0%
!	ATTTGTCGATTGTGGTGATG+TGG	-	chr7_4:52652498-52652517	Msa1162150:intron	40.0%
	AGCATCATCACCTCTCTCTT+TGG	-	chr7_4:52645645-52645664	Msa1162150:three_prime_UTR	45.0%
!	CTTTTCCAAGTCGAGAAGAG+GGG	+	chr7_4:52645692-52645711	None:intergenic	45.0%
!	CCTTTTCCAAGTCGAGAAGA+GGG	+	chr7_4:52645693-52645712	None:intergenic	45.0%
!	ACCTTTTCCAAGTCGAGAAG+AGG	+	chr7_4:52645694-52645713	None:intergenic	45.0%
	ATATCGAGCTCAATTGCCAC+TGG	-	chr7_4:52645986-52646005	Msa1162150:intron	45.0%
!!	AGGAAGCACATCTGCTTTTG+TGG	+	chr7_4:52646685-52646704	None:intergenic	45.0%
	CACTCATTTACCTTGTGAGC+AGG	+	chr7_4:52646705-52646724	None:intergenic	45.0%
	ATCATCTTGTGGCCCTGATA+AGG	-	chr7_4:52646793-52646812	Msa1162150:CDS	45.0%
!	GATTTAGGTTCTCCTGCTCT+TGG	-	chr7_4:52646933-52646952	Msa1162150:intron	45.0%
	TTTAAACAGTCCCCTAAGGC+TGG	-	chr7_4:52647138-52647157	Msa1162150:CDS	45.0%
!!	GCAACTTTTTCCAGCCTTAG+GGG	+	chr7_4:52647151-52647170	None:intergenic	45.0%
	TGCCCCTGGGTTCTTATATA+CGG	-	chr7_4:52647458-52647477	Msa1162150:intron	45.0%
	TCCCGTATATAAGAACCCAG+GGG	+	chr7_4:52647463-52647482	None:intergenic	45.0%
	TCATCCAGGTGACATATCAC+AGG	-	chr7_4:52647495-52647514	Msa1162150:intron	45.0%
	TCATCCTGTGATATGTCACC+TGG	+	chr7_4:52647502-52647521	None:intergenic	45.0%
	ACATCCTTCTTGGACACTGT+TGG	+	chr7_4:52647608-52647627	None:intergenic	45.0%
!	GTTGTGTATTGGCATGTGCA+AGG	+	chr7_4:52647928-52647947	None:intergenic	45.0%
	CGACATGTATTTAGGAACGG+AGG	-	chr7_4:52648122-52648141	Msa1162150:intron	45.0%
	GGAACAAGTTACTGTTCAGG+TGG	+	chr7_4:52648347-52648366	None:intergenic	45.0%
	GGAGGAACAAGTTACTGTTC+AGG	+	chr7_4:52648350-52648369	None:intergenic	45.0%
	CTACAGAGTAATAGATGGGG+AGG	+	chr7_4:52648368-52648387	None:intergenic	45.0%
	ATTCTTCGACGATAGGGCTT+TGG	+	chr7_4:52648599-52648618	None:intergenic	45.0%
!	GTTGTAGTTTTTCCCGTTCC+AGG	+	chr7_4:52648643-52648662	None:intergenic	45.0%
	GGGAAAAACTACAACAGTGG+TGG	-	chr7_4:52648648-52648667	Msa1162150:intron	45.0%
	CTGTTGACAACATCGTTGAG+CGG	-	chr7_4:52648734-52648753	Msa1162150:intron	45.0%
	TTTCTGCATGATCCAGAACC+CGG	+	chr7_4:52649006-52649025	None:intergenic	45.0%
	TAGAGAGAGAGAGAGAGTTG+GGG	-	chr7_4:52649415-52649434	Msa1162150:intron	45.0%
	GCATGTAGAGAGAAGACTTG+TGG	-	chr7_4:52649487-52649506	Msa1162150:CDS	45.0%
	ATGGAGAGTAGATCAGGTAG+AGG	-	chr7_4:52649520-52649539	Msa1162150:CDS	45.0%
	TGGAGAGTAGATCAGGTAGA+GGG	-	chr7_4:52649521-52649540	Msa1162150:CDS	45.0%
	AGAGTTAAGCTGGTGAGGAT+TGG	-	chr7_4:52649858-52649877	Msa1162150:intron	45.0%
	ACTTGAGGCAATAAACGTGC+AGG	+	chr7_4:52649888-52649907	None:intergenic	45.0%
	TGCACGTTTATTGCCTCAAG+TGG	-	chr7_4:52649887-52649906	Msa1162150:intron	45.0%
	ACGTTTATTGCCTCAAGTGG+TGG	-	chr7_4:52649890-52649909	Msa1162150:intron	45.0%
	GTGGTCTCGCAAATGACATT+CGG	-	chr7_4:52650031-52650050	Msa1162150:intron	45.0%
	TACAAGGAGGGAGATACAGA+AGG	-	chr7_4:52650322-52650341	Msa1162150:intron	45.0%
	GGGAGATACAGAAGGAACTT+AGG	-	chr7_4:52650330-52650349	Msa1162150:intron	45.0%
	TATCCAGAGAAGAGCGGAAA+AGG	-	chr7_4:52650357-52650376	Msa1162150:intron	45.0%
	CATTCCTCCAATAAGTGTCC+TGG	-	chr7_4:52650710-52650729	Msa1162150:intron	45.0%
	TCGTTGGAGGAAGTTGAAGA+TGG	+	chr7_4:52651001-52651020	None:intergenic	45.0%
	GAAGCTGAGAAGAAAGGCTT+AGG	-	chr7_4:52651032-52651051	Msa1162150:intron	45.0%
	GCATGGCACTATGTGATAAC+AGG	-	chr7_4:52651335-52651354	Msa1162150:intron	45.0%
	GTGTCTATGAGAAGAAGGGT+TGG	+	chr7_4:52651435-52651454	None:intergenic	45.0%
	AGCCGTGTCTATGAGAAGAA+GGG	+	chr7_4:52651439-52651458	None:intergenic	45.0%
	TTCTTCTCATAGACACGGCT+GGG	-	chr7_4:52651439-52651458	Msa1162150:intron	45.0%
	CTGAACTGATATGTGGAAGC+CGG	-	chr7_4:52651654-52651673	Msa1162150:intron	45.0%
	TATGGCTCATGCAAAGCGAT+TGG	-	chr7_4:52651835-52651854	Msa1162150:intron	45.0%
	CAAAGCGATTGGTGCAAAGT+GGG	-	chr7_4:52651846-52651865	Msa1162150:intron	45.0%
	AAAGCGATTGGTGCAAAGTG+GGG	-	chr7_4:52651847-52651866	Msa1162150:intron	45.0%
	TCTATACCTGGGCAGCATAT+GGG	+	chr7_4:52651901-52651920	None:intergenic	45.0%
	TTCTATACCTGGGCAGCATA+TGG	+	chr7_4:52651902-52651921	None:intergenic	45.0%
!!	CTCAACAGTTGATGGTTTCC+AGG	-	chr7_4:52652084-52652103	Msa1162150:intron	45.0%
	TTGTCTTCTTGCACGTGTCA+CGG	+	chr7_4:52652314-52652333	None:intergenic	45.0%
	ACTGAGACAGTCAGTAGTGA+TGG	-	chr7_4:52652352-52652371	Msa1162150:intron	45.0%
!!	TAAATACTTTATTATAATTA+AGG	-	chr7_4:52647777-52647796	Msa1162150:CDS	5.0%
!!!	TATATATTGATTAAAAAATA+TGG	-	chr7_4:52648060-52648079	Msa1162150:intron	5.0%
	TCTCTGCTGTGTAGCAGTGA+CGG	-	chr7_4:52645596-52645615	Msa1162150:three_prime_UTR	50.0%
!	GCAGTGACGGAGGATTACAA+TGG	-	chr7_4:52645609-52645628	Msa1162150:three_prime_UTR	50.0%
	TACAACCCCTCTTCTCGACT+TGG	-	chr7_4:52645684-52645703	Msa1162150:three_prime_UTR	50.0%
!!	CCCTCTTCTCGACTTGGAAA+AGG	-	chr7_4:52645690-52645709	Msa1162150:three_prime_UTR	50.0%
	AGATGTGCTTCCTGCTCACA+AGG	-	chr7_4:52646692-52646711	Msa1162150:intron	50.0%
	GCCCCTGGGTTCTTATATAC+GGG	-	chr7_4:52647459-52647478	Msa1162150:intron	50.0%
!!	TTCCTGTCTTGTTTGGGGAG+AGG	-	chr7_4:52647579-52647598	Msa1162150:intron	50.0%
	GCAACCAACAGTGTCCAAGA+AGG	-	chr7_4:52647601-52647620	Msa1162150:intron	50.0%
!	GTGTATTGGCATGTGCAAGG+TGG	+	chr7_4:52647925-52647944	None:intergenic	50.0%
	TTCTTGCTACATGGACCTCC+TGG	-	chr7_4:52648622-52648641	Msa1162150:intron	50.0%
!	GTAGTTTTTCCCGTTCCAGG+AGG	+	chr7_4:52648640-52648659	None:intergenic	50.0%
	AAACAACGTCTACCCTCCTG+TGG	-	chr7_4:52648891-52648910	Msa1162150:intron	50.0%
	GTGCCAAAGTCAGTAAGTGC+CGG	-	chr7_4:52648984-52649003	Msa1162150:intron	50.0%
	TGCCAAAGTCAGTAAGTGCC+GGG	-	chr7_4:52648985-52649004	Msa1162150:intron	50.0%
!!	AACCCGGCACTTACTGACTT+TGG	+	chr7_4:52648990-52649009	None:intergenic	50.0%
!!	TTGAGACTTGGCTCTAAGGC+TGG	-	chr7_4:52649267-52649286	Msa1162150:intron	50.0%
	CAGAGATGAGGATGTTGCGT+TGG	-	chr7_4:52649348-52649367	Msa1162150:intron	50.0%
	GGAGAGTAGATCAGGTAGAG+GGG	-	chr7_4:52649522-52649541	Msa1162150:CDS	50.0%
	GAAGCAACAGAACATCAGCC+AGG	+	chr7_4:52650154-52650173	None:intergenic	50.0%
	GGACTCTATCCAGAGAAGAG+CGG	-	chr7_4:52650351-52650370	Msa1162150:intron	50.0%
!	GGGGCTTCCTCTAAGAAACT+TGG	-	chr7_4:52650440-52650459	Msa1162150:intron	50.0%
	AAGCACTTGAGGTTGCATGC+TGG	-	chr7_4:52650504-52650523	Msa1162150:intron	50.0%
	ATGCTGGATACCTCTGCTGA+AGG	-	chr7_4:52650520-52650539	Msa1162150:intron	50.0%
	CAGCCGTGTCTATGAGAAGA+AGG	+	chr7_4:52651440-52651459	None:intergenic	50.0%
	CTTCTTCTCATAGACACGGC+TGG	-	chr7_4:52651438-52651457	Msa1162150:intron	50.0%
	ATAGACACGGCTGGGTATGT+TGG	-	chr7_4:52651447-52651466	Msa1162150:intron	50.0%
	TAGACACGGCTGGGTATGTT+GGG	-	chr7_4:52651448-52651467	Msa1162150:intron	50.0%
!	TCAGAGCTGCTTGACTAGTC+TGG	-	chr7_4:52651505-52651524	Msa1162150:intron	50.0%
!!	GCTTGACTAGTCTGGACATG+TGG	-	chr7_4:52651513-52651532	Msa1162150:CDS	50.0%
	GCAAAGCGATTGGTGCAAAG+TGG	-	chr7_4:52651845-52651864	Msa1162150:intron	50.0%
!	GGGGTGCTTCCTTCTGATAT+TGG	-	chr7_4:52651866-52651885	Msa1162150:intron	50.0%
	TATTACCCCATATGCTGCCC+AGG	-	chr7_4:52651892-52651911	Msa1162150:intron	50.0%
	CTATACCTGGGCAGCATATG+GGG	+	chr7_4:52651900-52651919	None:intergenic	50.0%
	TGGTTTCCAGGGAAGAGAGA+AGG	-	chr7_4:52652096-52652115	Msa1162150:intron	50.0%
!	GTGGTGATGTGGATCTGTGA+AGG	-	chr7_4:52652509-52652528	Msa1162150:intron	50.0%
	CACAGCAGAGAGAGAGAGAG+AGG	+	chr7_4:52645587-52645606	None:intergenic	55.0%
	ACTACACCTTGCCCAAGAGC+AGG	+	chr7_4:52646948-52646967	None:intergenic	55.0%
!	ATTGCCCATGCTGTTGGCTG+TGG	-	chr7_4:52647015-52647034	Msa1162150:intron	55.0%
	CTGTCCACAGCCAACAGCAT+GGG	+	chr7_4:52647022-52647041	None:intergenic	55.0%
	ACTGTCCACAGCCAACAGCA+TGG	+	chr7_4:52647023-52647042	None:intergenic	55.0%
	GCTGTGGACAGTCTCACCTT+TGG	-	chr7_4:52647031-52647050	Msa1162150:intron	55.0%
	TGCCTCTCCCCAAACAAGAC+AGG	+	chr7_4:52647584-52647603	None:intergenic	55.0%
	GCTACATGGACCTCCTGGAA+CGG	-	chr7_4:52648627-52648646	Msa1162150:intron	55.0%
	CTACATGGACCTCCTGGAAC+GGG	-	chr7_4:52648628-52648647	Msa1162150:intron	55.0%
!	TTGAGCGGCTAGTTCCACAC+AGG	-	chr7_4:52648749-52648768	Msa1162150:intron	55.0%
!!	AGTCAGTAAGTGCCGGGTTC+TGG	-	chr7_4:52648991-52649010	Msa1162150:intron	55.0%
	TGTAACTGTAAGCGGCGGTG+TGG	-	chr7_4:52649172-52649191	Msa1162150:intron	55.0%
!!	TGGCTCTAAGGCTGGTAGCA+AGG	-	chr7_4:52649275-52649294	Msa1162150:intron	55.0%
	AGTGCACTGTCCACCACTTG+AGG	+	chr7_4:52649903-52649922	None:intergenic	55.0%
!!	TCAAGTGGTGGACAGTGCAC+TGG	-	chr7_4:52649902-52649921	Msa1162150:intron	55.0%
!	CTGCCTTTTCCGCTCTTCTC+TGG	+	chr7_4:52650363-52650382	None:intergenic	55.0%
	CGAAGCTGCTCAAGCACTTG+AGG	-	chr7_4:52650493-52650512	Msa1162150:intron	55.0%
	TGGCTTCCTTCTCTCTTCCC+TGG	+	chr7_4:52652105-52652124	None:intergenic	55.0%
	TGGGCTTTCTGAGTGATCGC+CGG	-	chr7_4:52652275-52652294	Msa1162150:intron	55.0%
	TGATCGCCGGCGAATGAATG+TGG	-	chr7_4:52652288-52652307	Msa1162150:intron	55.0%
	TCACGGCCACATTCATTCGC+CGG	+	chr7_4:52652297-52652316	None:intergenic	55.0%
	CTGCTGTGTAGCAGTGACGG+AGG	-	chr7_4:52645599-52645618	Msa1162150:three_prime_UTR	60.0%
	CAAATTCCTCGACGCGCCAG+TGG	+	chr7_4:52646005-52646024	None:intergenic	60.0%
	CACTGGCGCGTCGAGGAATT+TGG	-	chr7_4:52646003-52646022	Msa1162150:intron	60.0%
	GGTTCTCCTGCTCTTGGGCA+AGG	-	chr7_4:52646939-52646958	Msa1162150:intron	60.0%
	ACTGTAAGCGGCGGTGTGGA+AGG	-	chr7_4:52649176-52649195	Msa1162150:intron	60.0%
	CAATTGCCACTGGCGCGTCG+AGG	-	chr7_4:52645996-52646015	Msa1162150:intron	65.0%
	GGACAGTGCACTGGATGCCC+AGG	-	chr7_4:52649911-52649930	Msa1162150:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	52645548	52652678	52645548	ID=Msa1162150;Name=Msa1162150
chr7_4	mRNA	52645548	52652678	52645548	ID=Msa1162150-mRNA-1;Parent=Msa1162150;Name=Msa1162150-mRNA-1;_AED=0.07;_eAED=0.07;_QI=80\|1\|1\|1\|1\|1\|15\|228\|645
chr7_4	exon	52645548	52645952	52645548	ID=Msa1162150-mRNA-1:exon:15167;Parent=Msa1162150-mRNA-1
chr7_4	exon	52646064	52646198	52646064	ID=Msa1162150-mRNA-1:exon:15166;Parent=Msa1162150-mRNA-1
chr7_4	exon	52646313	52646457	52646313	ID=Msa1162150-mRNA-1:exon:15165;Parent=Msa1162150-mRNA-1
chr7_4	exon	52646766	52646869	52646766	ID=Msa1162150-mRNA-1:exon:15164;Parent=Msa1162150-mRNA-1
chr7_4	exon	52647048	52647254	52647048	ID=Msa1162150-mRNA-1:exon:15163;Parent=Msa1162150-mRNA-1
chr7_4	exon	52647685	52647942	52647685	ID=Msa1162150-mRNA-1:exon:15162;Parent=Msa1162150-mRNA-1
chr7_4	exon	52648161	52648214	52648161	ID=Msa1162150-mRNA-1:exon:15161;Parent=Msa1162150-mRNA-1
chr7_4	exon	52648294	52648366	52648294	ID=Msa1162150-mRNA-1:exon:15160;Parent=Msa1162150-mRNA-1
chr7_4	exon	52649456	52649643	52649456	ID=Msa1162150-mRNA-1:exon:15159;Parent=Msa1162150-mRNA-1
chr7_4	exon	52650559	52650723	52650559	ID=Msa1162150-mRNA-1:exon:15158;Parent=Msa1162150-mRNA-1
chr7_4	exon	52651049	52651132	52651049	ID=Msa1162150-mRNA-1:exon:15157;Parent=Msa1162150-mRNA-1
chr7_4	exon	52651246	52651335	52651246	ID=Msa1162150-mRNA-1:exon:15156;Parent=Msa1162150-mRNA-1
chr7_4	exon	52651513	52651581	52651513	ID=Msa1162150-mRNA-1:exon:15155;Parent=Msa1162150-mRNA-1
chr7_4	exon	52652145	52652249	52652145	ID=Msa1162150-mRNA-1:exon:15154;Parent=Msa1162150-mRNA-1
chr7_4	exon	52652515	52652678	52652515	ID=Msa1162150-mRNA-1:exon:15153;Parent=Msa1162150-mRNA-1
chr7_4	five_prime_UTR	52652599	52652678	52652599	ID=Msa1162150-mRNA-1:five_prime_utr;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52652515	52652598	52652515	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52652145	52652249	52652145	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52651513	52651581	52651513	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52651246	52651335	52651246	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52651049	52651132	52651049	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52650559	52650723	52650559	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52649456	52649643	52649456	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52648294	52648366	52648294	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52648161	52648214	52648161	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52647685	52647942	52647685	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52647048	52647254	52647048	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52646766	52646869	52646766	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52646313	52646457	52646313	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52646064	52646198	52646064	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	CDS	52645776	52645952	52645776	ID=Msa1162150-mRNA-1:cds;Parent=Msa1162150-mRNA-1
chr7_4	three_prime_UTR	52645548	52645775	52645548	ID=Msa1162150-mRNA-1:three_prime_utr;Parent=Msa1162150-mRNA-1

Gene Sequence

>Msa1162150

ATGGAGAGTAAAAAGAAAGCATCATCACCTCTCTCTTTGGACCAATTCATCTCTATTACAACCCCTCTTCTCGACTTGGAAAAGGATGCTGAGATATCGAGCTCAATTGCCACTGGCGCGTCGAGGAATTTGGATACTGCTCAAAAGAGAGGATCAACAATCCTCAATTTGAAGTGTGTGGATGTTCAGACAGGGCTTATGGGAAAGTCTCTGATCGAGTTACAATCCACAAAAGCAGATGTGCTTCCTGCTCACAAGTTTGGCACTCATGATGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGGCAAGGTGTAGTTTACAGATTAAAGGACTCGTCAATTACTGTTGCTTTTGATGATATACCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTTGCAAATGAGGTGACATATCACAGGATGAAAGATGCATTAATACAGTTGAGTAAAGGAGTGCATAAGGGTCCTGCTTCTGATCTAATTCCTGTCTTGTTTGGGGAGAGGCAACCAACAGTGTCCAAGAAGGATGTAGCTTTCACTTCCATTAATAAAAATCTTGATCACTCTCAGAAAGATGCAATTTCCAAAGCCCTATCGTCGAAGAATGTTTTCTTGCTACATGGACCTCCTGGAACGGGAAAAACTACAACAGTGGTGGAAATTATATTACAAGAAGTGAAACGTGGATCTAAGATTCTTGCTTGTGCTGCCTCAAATATTGCTGTTGACAACATCGTTGAGCGGCTAGTTCCACACAGAGTTAAGCTGGTGAGGATTGGTCATCCTGCACGTTTATTGCCTCAAGTGGTGGACAGTGCACTGGATGCCCAGGTACTTCGAGGAGATAATAGTGGTCTCGCAAATGACATTCGGAAAGAAATGAAGGTATTGAATGGAAAGCTGCTAAAAACCAAAGAAAAAAATACAAGGAGGGAGATACAGAAGGAACTTAGGACTCTATCCAGAGAAGAGCGGAAAAGGCAGCAGCTTGCTGTTACAGACGTGATTAAAACTTCAGATGTAATATTGACTACTCTGATTGGGGCTTCCTCTAAGAAACTTGGCAATACTTCATTTGATTTAGTGATTATTGACGAAGCTGCTCAAGCACTTGAGGTTGCATGCTGGATACCTCTGCTGAAGGGTACAAGATGTATACTTGCAGGAGACCATCTTCAACTTCCTCCAACGATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACCCTCTTTGAAAGACTTGCAGAACTGTATGGAGATGAAGTCACATCTATGCTTACTGTCCAGTACCGTATGCATCAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGTAAGGTCAAGGCTCATGCATGTGTTGCTGCACATATGCTATATGATCTTGAGGGCGTGAAGAAGACATCTTCAACTGAACCAACCCTTCTTCTCATAGACACGGCTGGATGTGATATGGAAGAAAAGAAAGATGAAGAAGATAGCACCCTTAATGAAGGTGAATCTGAAGTTGCTATGGCTCATGCAAAGCGATTGGTGCAAAGTGGGGTGCTTCCTTCTGATATTGGAATTATTACCCCATATGCTGCCCAGGTTGTTTTACTGAAGATGTTAAAAAACAAGGAGAACTCACTGAAGGATATTGAAATCTCAACAGTTGATGGTTTCCAGGGAAGAGAGAAGGAAGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAGGAGGTGGGCTTTCTGAGTGATCGCCGGCGAATGAATGTGGCCGTGACACGTGCAAGAAGACAATGCTGTATTGTCTGTGACACTGAGACAGTCAGTAGTGATGGATTTCTAAAGCGGTTGATTGAATATTTTGAAGAGCATGGCGAATATCAGAGTGCATCCGAGTACCAGAATGAATAG

Protein sequence

>Msa1162150

MESKKKASSPLSLDQFISITTPLLDLEKDAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKSLIELQSTKADVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYHRMKDALIQLSKGVHKGPASDLIPVLFGERQPTVSKKDVAFTSINKNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLKTKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLGNTSFDLVIIDEAAQALEVACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAELYGDEVTSMLTVQYRMHQLIMDWSSKELYNSKVKAHACVAAHMLYDLEGVKKTSSTEPTLLLIDTAGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIVCDTETVSSDGFLKRLIEYFEEHGEYQSASEYQNE*