Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052260 | XP_003589097.1 | 95.185 | 623 | 27 | 2 | 1 | 622 | 1 | 621 | 0.0 | 1074 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052260 | sp|Q94AI1|QWRF2_ARATH | 42.402 | 691 | 284 | 24 | 1 | 618 | 1 | 650 | 2.52e-124 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052260 | G7ICE7 | 95.185 | 623 | 27 | 2 | 1 | 622 | 1 | 621 | 0.0 | 1074 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000510 | Msa0052260 | 0.840651 | 7.646803e-58 | -8.615850e-47 |
| Msa0002580 | Msa0052260 | 0.800506 | 1.395698e-48 | -8.615850e-47 |
| Msa0005890 | Msa0052260 | 0.849405 | 3.302996e-60 | -8.615850e-47 |
| Msa0018160 | Msa0052260 | 0.938262 | 8.991325e-99 | -8.615850e-47 |
| Msa0025580 | Msa0052260 | 0.815447 | 9.204245e-52 | -8.615850e-47 |
| Msa0027280 | Msa0052260 | 0.823422 | 1.397024e-53 | -8.615850e-47 |
| Msa0028420 | Msa0052260 | 0.826346 | 2.853857e-54 | -8.615850e-47 |
| Msa0032460 | Msa0052260 | 0.802592 | 5.214528e-49 | -8.615850e-47 |
| Msa0034810 | Msa0052260 | 0.807053 | 6.098072e-50 | -8.615850e-47 |
| Msa0035140 | Msa0052260 | 0.818360 | 2.041845e-52 | -8.615850e-47 |
| Msa0035340 | Msa0052260 | 0.800111 | 1.680017e-48 | -8.615850e-47 |
| Msa0036870 | Msa0052260 | 0.870117 | 1.859563e-66 | -8.615850e-47 |
| Msa0042610 | Msa0052260 | 0.812273 | 4.606311e-51 | -8.615850e-47 |
| Msa0052260 | Msa0054690 | 0.816345 | 5.801760e-52 | -8.615850e-47 |
| Msa0052260 | Msa0061290 | 0.807866 | 4.099582e-50 | -8.615850e-47 |
| Msa0052260 | Msa0071860 | 0.809800 | 1.581975e-50 | -8.615850e-47 |
| Msa0052260 | Msa0071880 | 0.808344 | 3.244191e-50 | -8.615850e-47 |
| Msa0052260 | Msa0081090 | 0.803484 | 3.409751e-49 | -8.615850e-47 |
| Msa0052260 | Msa0082260 | 0.800039 | 1.737602e-48 | -8.615850e-47 |
| Msa0052260 | Msa0087940 | 0.800574 | 1.352356e-48 | -8.615850e-47 |
| Msa0052260 | Msa0090400 | 0.872504 | 3.023130e-67 | -8.615850e-47 |
| Msa0052260 | Msa0097260 | 0.905133 | 5.922032e-80 | -8.615850e-47 |
| Msa0052260 | Msa0115080 | 0.812119 | 4.977021e-51 | -8.615850e-47 |
| Msa0052260 | Msa0117480 | 0.834111 | 3.619849e-56 | -8.615850e-47 |
| Msa0052260 | Msa0121330 | 0.807486 | 4.938595e-50 | -8.615850e-47 |
| Msa0052260 | Msa0122040 | 0.811084 | 8.355404e-51 | -8.615850e-47 |
| Msa0052260 | Msa0124060 | 0.803383 | 3.579455e-49 | -8.615850e-47 |
| Msa0052260 | Msa0128310 | 0.807982 | 3.874075e-50 | -8.615850e-47 |
| Msa0052260 | Msa0136650 | 0.806005 | 1.014711e-49 | -8.615850e-47 |
| Msa0052260 | Msa0137880 | 0.858690 | 6.926363e-63 | -8.615850e-47 |
| Msa0052260 | Msa0140280 | 0.810539 | 1.096313e-50 | -8.615850e-47 |
| Msa0052260 | Msa0146040 | 0.935583 | 6.746827e-97 | -8.615850e-47 |
| Msa0052260 | Msa0152350 | 0.804361 | 2.241951e-49 | -8.615850e-47 |
| Msa0052260 | Msa0168500 | 0.807688 | 4.472189e-50 | -8.615850e-47 |
| Msa0052260 | Msa0174290 | 0.806308 | 8.763655e-50 | -8.615850e-47 |
| Msa0052260 | Msa0178560 | 0.843017 | 1.814981e-58 | -8.615850e-47 |
| Msa0052260 | Msa0180650 | 0.813621 | 2.333594e-51 | -8.615850e-47 |
| Msa0052260 | Msa0182240 | 0.805843 | 1.097837e-49 | -8.615850e-47 |
| Msa0052260 | Msa0188610 | 0.807380 | 5.200902e-50 | -8.615850e-47 |
| Msa0052260 | Msa0190570 | 0.819467 | 1.143993e-52 | -8.615850e-47 |
| Msa0052260 | Msa0198050 | 0.809580 | 1.763649e-50 | -8.615850e-47 |
| Msa0052260 | Msa0200050 | 0.818449 | 1.949104e-52 | -8.615850e-47 |
| Msa0052260 | Msa0209980 | 0.820649 | 6.136162e-53 | -8.615850e-47 |
| Msa0052260 | Msa0225100 | 0.804959 | 1.681929e-49 | -8.615850e-47 |
| Msa0052260 | Msa0225860 | 0.864035 | 1.623913e-64 | -8.615850e-47 |
| Msa0052260 | Msa0230800 | 0.811965 | 5.377252e-51 | -8.615850e-47 |
| Msa0052260 | Msa0242590 | 0.838487 | 2.792559e-57 | -8.615850e-47 |
| Msa0052260 | Msa0260510 | 0.827564 | 1.459027e-54 | -8.615850e-47 |
| Msa0052260 | Msa0267110 | 0.847177 | 1.363529e-59 | -8.615850e-47 |
| Msa0052260 | Msa0270340 | 0.817955 | 2.520447e-52 | -8.615850e-47 |
| Msa0052260 | Msa0280790 | 0.821903 | 3.152520e-53 | -8.615850e-47 |
| Msa0052260 | Msa0281350 | 0.818784 | 1.635970e-52 | -8.615850e-47 |
| Msa0052260 | Msa0281390 | 0.828100 | 1.084620e-54 | -8.615850e-47 |
| Msa0052260 | Msa0287740 | 0.807898 | 4.036550e-50 | -8.615850e-47 |
| Msa0052260 | Msa0292160 | 0.809114 | 2.219923e-50 | -8.615850e-47 |
| Msa0052260 | Msa0292330 | 0.819492 | 1.128713e-52 | -8.615850e-47 |
| Msa0052260 | Msa0298470 | 0.820096 | 8.215064e-53 | -8.615850e-47 |
| Msa0052260 | Msa0337480 | 0.809378 | 1.949286e-50 | -8.615850e-47 |
| Msa0052260 | Msa0380620 | 0.804680 | 1.923260e-49 | -8.615850e-47 |
| Msa0052260 | Msa0380670 | 0.817207 | 3.717305e-52 | -8.615850e-47 |
| Msa0052260 | Msa0389950 | 0.823456 | 1.371906e-53 | -8.615850e-47 |
| Msa0052260 | Msa0419700 | 0.852623 | 4.087480e-61 | -8.615850e-47 |
| Msa0052260 | Msa0428150 | 0.803006 | 4.283726e-49 | -8.615850e-47 |
| Msa0052260 | Msa0430260 | 0.805064 | 1.598627e-49 | -8.615850e-47 |
| Msa0052260 | Msa0430300 | 0.831838 | 1.330180e-55 | -8.615850e-47 |
| Msa0052260 | Msa0435210 | 0.807837 | 4.158941e-50 | -8.615850e-47 |
| Msa0052260 | Msa0436910 | 0.811231 | 7.765857e-51 | -8.615850e-47 |
| Msa0052260 | Msa0450160 | 0.800056 | 1.723318e-48 | -8.615850e-47 |
| Msa0052260 | Msa0462500 | 0.811292 | 7.529280e-51 | -8.615850e-47 |
| Msa0052260 | Msa0472950 | 0.804412 | 2.187782e-49 | -8.615850e-47 |
| Msa0052260 | Msa0474520 | 0.833500 | 5.146804e-56 | -8.615850e-47 |
| Msa0052260 | Msa0483910 | 0.809980 | 1.447100e-50 | -8.615850e-47 |
| Msa0052260 | Msa0495550 | 0.826678 | 2.377633e-54 | -8.615850e-47 |
| Msa0052260 | Msa0511750 | 0.827847 | 1.247639e-54 | -8.615850e-47 |
| Msa0052260 | Msa0530780 | 0.845373 | 4.229502e-59 | -8.615850e-47 |
| Msa0052260 | Msa0543660 | 0.803002 | 4.291222e-49 | -8.615850e-47 |
| Msa0052260 | Msa0543960 | 0.810447 | 1.147392e-50 | -8.615850e-47 |
| Msa0052260 | Msa0547900 | 0.821300 | 4.344394e-53 | -8.615850e-47 |
| Msa0052260 | Msa0557460 | 0.815984 | 6.986130e-52 | -8.615850e-47 |
| Msa0052260 | Msa0563940 | 0.807288 | 5.438701e-50 | -8.615850e-47 |
| Msa0052260 | Msa0567170 | 0.813049 | 3.116508e-51 | -8.615850e-47 |
| Msa0052260 | Msa0569200 | 0.808468 | 3.051686e-50 | -8.615850e-47 |
| Msa0052260 | Msa0580200 | 0.816771 | 4.656795e-52 | -8.615850e-47 |
| Msa0052260 | Msa0580370 | 0.835494 | 1.624057e-56 | -8.615850e-47 |
| Msa0052260 | Msa0584420 | 0.816798 | 4.591780e-52 | -8.615850e-47 |
| Msa0052260 | Msa0587620 | 0.803119 | 4.058468e-49 | -8.615850e-47 |
| Msa0052260 | Msa0597790 | 0.812522 | 4.064106e-51 | -8.615850e-47 |
| Msa0052260 | Msa0600930 | 0.824368 | 8.381887e-54 | -8.615850e-47 |
| Msa0052260 | Msa0602880 | 0.812067 | 5.107868e-51 | -8.615850e-47 |
| Msa0052260 | Msa0603380 | 0.802594 | 5.208941e-49 | -8.615850e-47 |
| Msa0052260 | Msa0608330 | 0.804764 | 1.847006e-49 | -8.615850e-47 |
| Msa0052260 | Msa0640200 | 0.806660 | 7.383749e-50 | -8.615850e-47 |
| Msa0052260 | Msa0658640 | 0.815198 | 1.045456e-51 | -8.615850e-47 |
| Msa0052260 | Msa0658880 | 0.815998 | 6.934050e-52 | -8.615850e-47 |
| Msa0052260 | Msa0661150 | 0.821373 | 4.179062e-53 | -8.615850e-47 |
| Msa0052260 | Msa0666700 | 0.803996 | 2.669568e-49 | -8.615850e-47 |
| Msa0052260 | Msa0683470 | 0.831177 | 1.935394e-55 | -8.615850e-47 |
| Msa0052260 | Msa0689520 | 0.804943 | 1.694487e-49 | -8.615850e-47 |
| Msa0052260 | Msa0700460 | 0.832926 | 7.151032e-56 | -8.615850e-47 |
| Msa0052260 | Msa0704410 | 0.806364 | 8.525154e-50 | -8.615850e-47 |
| Msa0052260 | Msa0735780 | 0.834591 | 2.743179e-56 | -8.615850e-47 |
| Msa0052260 | Msa0741220 | 0.826465 | 2.672484e-54 | -8.615850e-47 |
| Msa0052260 | Msa0756490 | 0.827019 | 1.970820e-54 | -8.615850e-47 |
| Msa0052260 | Msa0761670 | 0.822973 | 1.778424e-53 | -8.615850e-47 |
| Msa0052260 | Msa0777750 | 0.810144 | 1.333890e-50 | -8.615850e-47 |
| Msa0052260 | Msa0791730 | 0.813081 | 3.065291e-51 | -8.615850e-47 |
| Msa0052260 | Msa0795870 | 0.825854 | 3.734671e-54 | -8.615850e-47 |
| Msa0052260 | Msa0824450 | 0.802590 | 5.219079e-49 | -8.615850e-47 |
| Msa0052260 | Msa0829300 | 0.816786 | 4.620247e-52 | -8.615850e-47 |
| Msa0052260 | Msa0829330 | 0.813419 | 2.584358e-51 | -8.615850e-47 |
| Msa0052260 | Msa0833650 | 0.829951 | 3.861640e-55 | -8.615850e-47 |
| Msa0052260 | Msa0835490 | 0.834194 | 3.451726e-56 | -8.615850e-47 |
| Msa0052260 | Msa0945110 | 0.824040 | 1.001002e-53 | -8.615850e-47 |
| Msa0052260 | Msa0966320 | 0.804848 | 1.773967e-49 | -8.615850e-47 |
| Msa0052260 | Msa0967870 | 0.805402 | 1.358035e-49 | -8.615850e-47 |
| Msa0052260 | Msa0968850 | 0.809013 | 2.334090e-50 | -8.615850e-47 |
| Msa0052260 | Msa1003800 | 0.809533 | 1.805777e-50 | -8.615850e-47 |
| Msa0052260 | Msa1020560 | 0.803086 | 4.123622e-49 | -8.615850e-47 |
| Msa0052260 | Msa1030800 | 0.836745 | 7.816975e-57 | -8.615850e-47 |
| Msa0052260 | Msa1042160 | 0.821232 | 4.504100e-53 | -8.615850e-47 |
| Msa0052260 | Msa1042190 | 0.820898 | 5.376858e-53 | -8.615850e-47 |
| Msa0052260 | Msa1044680 | 0.806962 | 6.376024e-50 | -8.615850e-47 |
| Msa0052260 | Msa1045140 | 0.806608 | 7.574887e-50 | -8.615850e-47 |
| Msa0052260 | Msa1074370 | 0.804472 | 2.125451e-49 | -8.615850e-47 |
| Msa0052260 | Msa1076510 | 0.819554 | 1.092847e-52 | -8.615850e-47 |
| Msa0052260 | Msa1081390 | 0.816873 | 4.418620e-52 | -8.615850e-47 |
| Msa0052260 | Msa1084960 | 0.810286 | 1.243155e-50 | -8.615850e-47 |
| Msa0052260 | Msa1090140 | 0.848316 | 6.623829e-60 | -8.615850e-47 |
| Msa0052260 | Msa1096960 | 0.812756 | 3.611608e-51 | -8.615850e-47 |
| Msa0052260 | Msa1097980 | 0.811791 | 5.867401e-51 | -8.615850e-47 |
| Msa0052260 | Msa1103990 | 0.819951 | 8.866186e-53 | -8.615850e-47 |
| Msa0052260 | Msa1105780 | 0.801789 | 7.628339e-49 | -8.615850e-47 |
| Msa0052260 | Msa1116220 | 0.826098 | 3.268940e-54 | -8.615850e-47 |
| Msa0052260 | Msa1116660 | 0.821779 | 3.366894e-53 | -8.615850e-47 |
| Msa0052260 | Msa1117920 | 0.804633 | 1.966986e-49 | -8.615850e-47 |
| Msa0052260 | Msa1119940 | 0.827812 | 1.272243e-54 | -8.615850e-47 |
| Msa0052260 | Msa1130230 | 0.842562 | 2.397540e-58 | -8.615850e-47 |
| Msa0052260 | Msa1130240 | 0.817901 | 2.592708e-52 | -8.615850e-47 |
| Msa0052260 | Msa1132840 | 0.835308 | 1.809318e-56 | -8.615850e-47 |
| Msa0052260 | Msa1155210 | 0.814262 | 1.684962e-51 | -8.615850e-47 |
| Msa0052260 | Msa1155830 | 0.803312 | 3.702633e-49 | -8.615850e-47 |
| Msa0052260 | Msa1161680 | 0.815224 | 1.031393e-51 | -8.615850e-47 |
| Msa0052260 | Msa1162590 | 0.825209 | 5.309245e-54 | -8.615850e-47 |
| Msa0052260 | Msa1167470 | 0.809278 | 2.048263e-50 | -8.615850e-47 |
| Msa0052260 | Msa1204040 | 0.806042 | 9.967160e-50 | -8.615850e-47 |
| Msa0052260 | Msa1208950 | 0.814329 | 1.628836e-51 | -8.615850e-47 |
| Msa0052260 | Msa1216110 | 0.805411 | 1.352530e-49 | -8.615850e-47 |
| Msa0052260 | Msa1224930 | 0.803933 | 2.751700e-49 | -8.615850e-47 |
| Msa0052260 | Msa1226520 | 0.823604 | 1.266938e-53 | -8.615850e-47 |
| Msa0052260 | Msa1240770 | 0.813360 | 2.662953e-51 | -8.615850e-47 |
| Msa0052260 | Msa1265650 | 0.800320 | 1.523539e-48 | -8.615850e-47 |
| Msa0052260 | Msa1282260 | 0.809260 | 2.065626e-50 | -8.615850e-47 |
| Msa0052260 | Msa1297230 | 0.813809 | 2.120422e-51 | -8.615850e-47 |
| Msa0052260 | Msa1321340 | 0.840407 | 8.857750e-58 | -8.615850e-47 |
| Msa0052260 | Msa1330410 | 0.802156 | 6.414016e-49 | -8.615850e-47 |
| Msa0052260 | Msa1333080 | 0.827998 | 1.147416e-54 | -8.615850e-47 |
| Msa0052260 | Msa1343170 | 0.808699 | 2.724211e-50 | -8.615850e-47 |
| Msa0052260 | Msa1343180 | 0.838536 | 2.712631e-57 | -8.615850e-47 |
| Msa0052260 | Msa1359690 | 0.800655 | 1.301344e-48 | -8.615850e-47 |
| Msa0052260 | Msa1370840 | 0.806449 | 8.183633e-50 | -8.615850e-47 |
| Msa0052260 | Msa1372040 | 0.840607 | 7.853859e-58 | -8.615850e-47 |
| Msa0052260 | Msa1372230 | 0.848826 | 4.783505e-60 | -8.615850e-47 |
| Msa0052260 | Msa1390440 | 0.805007 | 1.642875e-49 | -8.615850e-47 |
| Msa0052260 | Msa1397400 | 0.829391 | 5.284105e-55 | -8.615850e-47 |
| Msa0052260 | Msa1420950 | 0.809429 | 1.900436e-50 | -8.615850e-47 |
| Msa0052260 | Msa1454140 | 0.846220 | 2.490607e-59 | -8.615850e-47 |
| Msa0052260 | Msa1464750 | 0.833120 | 6.399928e-56 | -8.615850e-47 |
| Msa0052260 | Msa1465440 | 0.800961 | 1.127195e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052260 | MtrunA17_Chr1g0152681 | 95.185 | 623 | 27 | 2 | 1 | 622 | 1 | 621 | 0.0 | 1074 |
| Msa0052260 | MtrunA17_Chr1g0207481 | 46.780 | 528 | 228 | 12 | 115 | 620 | 120 | 616 | 1.64e-121 | 373 |
| Msa0052260 | MtrunA17_Chr4g0073681 | 48.315 | 267 | 122 | 2 | 362 | 615 | 347 | 610 | 1.87e-62 | 218 |
| Msa0052260 | MtrunA17_Chr2g0291221 | 35.885 | 209 | 134 | 0 | 409 | 617 | 275 | 483 | 2.49e-39 | 151 |
| Msa0052260 | MtrunA17_Chr2g0323821 | 27.841 | 352 | 216 | 8 | 300 | 622 | 149 | 491 | 4.62e-27 | 115 |
| Msa0052260 | MtrunA17_Chr3g0079101 | 33.333 | 189 | 126 | 0 | 425 | 613 | 179 | 367 | 7.34e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052260 | AT1G49890.1 | 42.402 | 691 | 284 | 24 | 1 | 618 | 1 | 650 | 2.56e-125 | 385 |
| Msa0052260 | AT3G19570.2 | 43.077 | 585 | 272 | 15 | 64 | 614 | 84 | 641 | 4.58e-119 | 368 |
| Msa0052260 | AT3G19570.1 | 43.286 | 566 | 260 | 15 | 64 | 595 | 84 | 622 | 7.62e-114 | 354 |
| Msa0052260 | AT3G19570.4 | 43.575 | 537 | 242 | 15 | 64 | 566 | 84 | 593 | 1.60e-104 | 329 |
| Msa0052260 | AT3G19570.3 | 43.575 | 537 | 242 | 15 | 64 | 566 | 84 | 593 | 1.60e-104 | 329 |
| Msa0052260 | AT4G30710.3 | 34.426 | 671 | 316 | 23 | 17 | 615 | 4 | 622 | 3.80e-74 | 250 |
| Msa0052260 | AT4G30710.1 | 34.426 | 671 | 316 | 23 | 17 | 615 | 4 | 622 | 3.80e-74 | 250 |
| Msa0052260 | AT4G30710.2 | 34.426 | 671 | 316 | 23 | 17 | 615 | 4 | 622 | 1.52e-73 | 248 |
| Msa0052260 | AT4G30710.4 | 34.394 | 660 | 309 | 23 | 17 | 604 | 4 | 611 | 1.28e-71 | 243 |
| Msa0052260 | AT5G43160.1 | 50.890 | 281 | 116 | 6 | 337 | 615 | 1 | 261 | 5.24e-66 | 217 |
| Msa0052260 | AT5G43160.2 | 50.890 | 281 | 116 | 6 | 337 | 615 | 1 | 261 | 5.24e-66 | 217 |
| Msa0052260 | AT2G24070.1 | 46.388 | 263 | 123 | 4 | 355 | 615 | 340 | 586 | 1.27e-59 | 210 |
| Msa0052260 | AT2G24070.3 | 46.388 | 263 | 123 | 4 | 355 | 615 | 340 | 586 | 1.27e-59 | 210 |
| Msa0052260 | AT2G24070.2 | 46.388 | 263 | 123 | 4 | 355 | 615 | 340 | 586 | 1.27e-59 | 210 |
| Msa0052260 | AT4G25190.1 | 34.031 | 191 | 126 | 0 | 423 | 613 | 198 | 388 | 2.56e-32 | 129 |
| Msa0052260 | AT4G25190.2 | 33.854 | 192 | 126 | 1 | 423 | 613 | 198 | 389 | 3.03e-31 | 126 |
| Msa0052260 | AT2G44190.1 | 34.188 | 234 | 144 | 3 | 387 | 616 | 238 | 465 | 3.54e-31 | 127 |
| Msa0052260 | AT3G60000.2 | 31.220 | 205 | 141 | 0 | 409 | 613 | 237 | 441 | 4.57e-27 | 115 |
| Msa0052260 | AT3G60000.1 | 32.203 | 177 | 118 | 1 | 423 | 599 | 251 | 425 | 3.78e-25 | 109 |
| Msa0052260 | AT2G20815.1 | 34.054 | 185 | 120 | 2 | 424 | 607 | 280 | 463 | 2.07e-22 | 101 |
| Msa0052260 | AT2G20815.4 | 34.054 | 185 | 120 | 2 | 424 | 607 | 203 | 386 | 4.78e-22 | 99.4 |
| Msa0052260 | AT2G20815.3 | 33.871 | 186 | 120 | 3 | 424 | 607 | 280 | 464 | 3.45e-21 | 97.8 |
| Msa0052260 | AT2G20815.2 | 33.871 | 186 | 120 | 3 | 424 | 607 | 251 | 435 | 4.26e-21 | 97.1 |
| Msa0052260 | AT5G43155.1 | 33.449 | 287 | 117 | 16 | 22 | 308 | 18 | 230 | 1.04e-13 | 71.6 |
Find 171 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTTATCCGTTTCGTTTC+AGG | 0.110567 | 1_2:+6447416 | Msa0052260:CDS |
| CAATTTCATTGCTGACTTCT+AGG | 0.154009 | 1_2:-6450976 | None:intergenic |
| TTTGGAAGATTGGGCTATTC+TGG | 0.179886 | 1_2:+6449568 | Msa0052260:CDS |
| ACTCTCAACGTTAAATTTCT+AGG | 0.188233 | 1_2:+6446939 | Msa0052260:five_prime_UTR |
| TATACATCATTTGACAATTA+AGG | 0.201556 | 1_2:-6451217 | None:intergenic |
| GTTACTTCTGGTAGTTCTTC+TGG | 0.203202 | 1_2:+6447864 | Msa0052260:CDS |
| CGTGATTGTGATTGTGGTTT+TGG | 0.235117 | 1_2:-6446753 | None:intergenic |
| GTCATTGCGGAATTCGTTAT+TGG | 0.251953 | 1_2:+6447734 | Msa0052260:CDS |
| CAACTGTAACTTTATTCTTT+TGG | 0.255507 | 1_2:-6449086 | None:intergenic |
| GTCTAACACGTATTTGTATA+TGG | 0.259365 | 1_2:+6451318 | Msa0052260:three_prime_UTR |
| AAACAGAAAATTCGATTTCT+AGG | 0.267547 | 1_2:+6447589 | Msa0052260:CDS |
| TTGAGAAATTCGAATGGATT+TGG | 0.285233 | 1_2:+6447696 | Msa0052260:CDS |
| TCTTCGAGAAACGGTGGAAT+TGG | 0.307770 | 1_2:+6447975 | Msa0052260:CDS |
| AGGATCATACTTGCTCATTC+AGG | 0.314619 | 1_2:-6449138 | None:intergenic |
| ATAGGAGTGGTTAGTTAGTT+TGG | 0.314997 | 1_2:+6451061 | Msa0052260:three_prime_UTR |
| ATTTGACAATTAAGGATATA+AGG | 0.321148 | 1_2:-6451209 | None:intergenic |
| CATTGAGACTCCTACATAAC+AGG | 0.331265 | 1_2:+6448315 | Msa0052260:CDS |
| AACAGTTCCTCCGAAGCTTT+TGG | 0.334062 | 1_2:+6448007 | Msa0052260:CDS |
| TCTTCTGGAGTACAGGAGTT+TGG | 0.345008 | 1_2:+6447879 | Msa0052260:CDS |
| TTGTATCAGAAAAGCCTCTA+TGG | 0.346941 | 1_2:+6449022 | Msa0052260:intron |
| TTATCAGAAGGAACAAGTTC+AGG | 0.354897 | 1_2:-6447834 | None:intergenic |
| TTTGTATACTATGCGATATC+AGG | 0.356364 | 1_2:-6450942 | None:intergenic |
| ACTCTTCCTCTTCCAATTGT+CGG | 0.357125 | 1_2:-6447549 | None:intergenic |
| AGATGATCTATTTGGAAGAT+TGG | 0.359337 | 1_2:+6449558 | Msa0052260:intron |
| AATCAATCAAGACCGTTTCA+TGG | 0.363348 | 1_2:-6451097 | None:intergenic |
| GATAATGAAAGTGTTACTTC+TGG | 0.379947 | 1_2:+6447852 | Msa0052260:CDS |
| GAAGTAACTTCTCGTGCTTT+CGG | 0.386297 | 1_2:-6447150 | None:intergenic |
| GATGATCTATTTGGAAGATT+GGG | 0.390025 | 1_2:+6449559 | Msa0052260:intron |
| GCCTCTTGCAAGAACCTTGC+CGG | 0.390843 | 1_2:-6447942 | None:intergenic |
| ACGGTTACAACACCGACAAT+TGG | 0.406091 | 1_2:+6447537 | Msa0052260:CDS |
| AGCTCGAGCGATTGTTGTTC+CGG | 0.406484 | 1_2:+6447923 | Msa0052260:CDS |
| GATGGCATCCCTAGCTTACT+TGG | 0.408280 | 1_2:-6448134 | None:intergenic |
| CTCTGCACCGTCGCTGGCGG+CGG | 0.409488 | 1_2:-6447474 | None:intergenic |
| GTCAATTATTAGAACTATGC+AGG | 0.417605 | 1_2:+6450776 | Msa0052260:CDS |
| GGAATTTGTCGTTCTTCAAA+TGG | 0.420815 | 1_2:+6451151 | Msa0052260:three_prime_UTR |
| CTCAAACTCTGCACCGTCGC+TGG | 0.421458 | 1_2:-6447480 | None:intergenic |
| ATGATGTTAGCACCCCAAAA+AGG | 0.422613 | 1_2:-6451029 | None:intergenic |
| CTCTCAACGTTAAATTTCTA+GGG | 0.427128 | 1_2:+6446940 | Msa0052260:five_prime_UTR |
| TAATAATTGACAAAAGATCT+TGG | 0.427756 | 1_2:-6450764 | None:intergenic |
| ACCGTTGTTACCTTCTGAAT+CGG | 0.428192 | 1_2:+6447107 | Msa0052260:CDS |
| CTCAGTCGACGGAGCGGCAG+AGG | 0.428799 | 1_2:+6447322 | Msa0052260:CDS |
| GTGTACTCTGGTTCCCTCTC+AGG | 0.430024 | 1_2:+6449596 | Msa0052260:CDS |
| CAACGTTAAATTTCTAGGGT+TGG | 0.430343 | 1_2:+6446944 | Msa0052260:five_prime_UTR |
| AGTTTATCCGTTTCGTTTCA+GGG | 0.440821 | 1_2:+6447417 | Msa0052260:CDS |
| GGCGGTTTCGCTTTACTCAC+CGG | 0.446470 | 1_2:-6447456 | None:intergenic |
| GTTGTGATTTCGCCGGCCAC+CGG | 0.446740 | 1_2:-6447626 | None:intergenic |
| TGGTAGTTCTTCTGGAGTAC+AGG | 0.453379 | 1_2:+6447872 | Msa0052260:CDS |
| GGACGAACTGCAGAACGAAT+TGG | 0.453439 | 1_2:-6448104 | None:intergenic |
| CTTCGGTAACAGTAGGCATA+TGG | 0.462002 | 1_2:-6449880 | None:intergenic |
| TAAATTTCTAGGGTTGGTAA+TGG | 0.462631 | 1_2:+6446950 | Msa0052260:five_prime_UTR |
| CAAGGTACTCCTCGGCCTAA+TGG | 0.468202 | 1_2:+6447351 | Msa0052260:CDS |
| CAGCGACGGTGCAGAGTTTG+AGG | 0.469732 | 1_2:+6447481 | Msa0052260:CDS |
| GAAAAGCCTCTATGGTGCTT+GGG | 0.470233 | 1_2:+6449030 | Msa0052260:intron |
| GATAGATCTACTGAATTTGA+AGG | 0.470240 | 1_2:+6449812 | Msa0052260:intron |
| TGACCGTTACGTTGTTATGA+AGG | 0.472669 | 1_2:-6446837 | None:intergenic |
| AGGAGCGACCGAAGCGCTAA+AGG | 0.473671 | 1_2:+6449616 | Msa0052260:CDS |
| AGAAAAGCCTCTATGGTGCT+TGG | 0.475511 | 1_2:+6449029 | Msa0052260:intron |
| CCTGCTTCTCCAAGTAAGCT+AGG | 0.476087 | 1_2:+6448125 | Msa0052260:CDS |
| GCCGGAACCTTCCTCCTCTC+CGG | 0.476363 | 1_2:-6447513 | None:intergenic |
| GGTGCTGGCCTTTAGCGCTT+CGG | 0.477110 | 1_2:-6449624 | None:intergenic |
| TTCAGCAATGGATGTGATGC+AGG | 0.485132 | 1_2:+6449845 | Msa0052260:CDS |
| TCTGGAGTACAGGAGTTTGG+AGG | 0.486148 | 1_2:+6447882 | Msa0052260:CDS |
| AACAGGAAGACGTAGGGTGC+TGG | 0.490737 | 1_2:-6449639 | None:intergenic |
| GATTTGGAAGCAATGTGGTT+AGG | 0.494423 | 1_2:+6447712 | Msa0052260:CDS |
| TCAGAAAATGTTGTTTACTT+CGG | 0.495807 | 1_2:+6447389 | Msa0052260:CDS |
| GCAACCGGAGTCTCACCATT+AGG | 0.495895 | 1_2:-6447366 | None:intergenic |
| AAGGACTCACACCGCGCGAA+GGG | 0.498493 | 1_2:-6448166 | None:intergenic |
| CGACGGAGCGGCAGAGGCAA+CGG | 0.498632 | 1_2:+6447328 | Msa0052260:CDS |
| AGATTGGGCTATTCTGGATC+GGG | 0.500099 | 1_2:+6449574 | Msa0052260:CDS |
| ACCGGAGAGGAGGAAGGTTC+CGG | 0.504389 | 1_2:+6447512 | Msa0052260:CDS |
| AAGATTGGGCTATTCTGGAT+CGG | 0.505653 | 1_2:+6449573 | Msa0052260:CDS |
| CAAGGACTCACACCGCGCGA+AGG | 0.509047 | 1_2:-6448167 | None:intergenic |
| TAGCAACACCGTTTCTTCCA+CGG | 0.514313 | 1_2:-6448190 | None:intergenic |
| AGTGGATCAGCACCGGTGGC+CGG | 0.514774 | 1_2:+6447614 | Msa0052260:CDS |
| CGCTTCGGTCGCTCCTGAGA+GGG | 0.515117 | 1_2:-6449609 | None:intergenic |
| ATTCTGGATCGGGTGTACTC+TGG | 0.516487 | 1_2:+6449584 | Msa0052260:CDS |
| CCTAGCTTACTTGGAGAAGC+AGG | 0.524697 | 1_2:-6448125 | None:intergenic |
| GGAGTACAGGAGTTTGGAGG+TGG | 0.529886 | 1_2:+6447885 | Msa0052260:CDS |
| AGCGAAACCGCCGCCAGCGA+CGG | 0.529951 | 1_2:+6447467 | Msa0052260:CDS |
| GAGCGATTGTTGTTCCGGCA+AGG | 0.530118 | 1_2:+6447928 | Msa0052260:CDS |
| CGCGAAGGGGACCTCGGTGA+TGG | 0.530379 | 1_2:-6448152 | None:intergenic |
| ACGCAGCGTGATTGTGATTG+TGG | 0.532229 | 1_2:-6446759 | None:intergenic |
| GGAGGCTATTTGTTCAGCAA+TGG | 0.537402 | 1_2:+6449833 | Msa0052260:CDS |
| ACTAATCCGTCTTCGAGAAA+CGG | 0.538884 | 1_2:+6447966 | Msa0052260:CDS |
| AATTCAGTGTCTGCACAGAA+AGG | 0.541182 | 1_2:-6448379 | None:intergenic |
| GGATTGCAAAGTGTGAAGAT+TGG | 0.543770 | 1_2:+6451130 | Msa0052260:three_prime_UTR |
| GAGGAGGAAGGTTCCGGCGA+CGG | 0.543889 | 1_2:+6447518 | Msa0052260:CDS |
| GAATTTCATGAATAGAAGCT+TGG | 0.545802 | 1_2:+6447659 | Msa0052260:CDS |
| GGTTGTAAATGTAAAGTCAC+TGG | 0.546346 | 1_2:+6450689 | Msa0052260:intron |
| GCTGAATTCAATCCATGAAA+CGG | 0.546656 | 1_2:+6451085 | Msa0052260:three_prime_UTR |
| GTCGGTGTTGTAACCGTCGC+CGG | 0.547586 | 1_2:-6447531 | None:intergenic |
| ATTCAGTGTCTGCACAGAAA+GGG | 0.550651 | 1_2:-6448378 | None:intergenic |
| ATTGCATAAGCCTGTTATGT+AGG | 0.553385 | 1_2:-6448325 | None:intergenic |
| ATTCCTCGTGGAGACGATGC+AGG | 0.554378 | 1_2:-6448056 | None:intergenic |
| CTTGATTGATTAGCATAGTG+AGG | 0.554705 | 1_2:+6451109 | Msa0052260:three_prime_UTR |
| GGTAACAACGGTGGCCTCGT+TGG | 0.555549 | 1_2:-6447096 | None:intergenic |
| CGATTCTCCCTGAAACGAAA+CGG | 0.558328 | 1_2:-6447424 | None:intergenic |
| ATTCCACCGTTTCTCGAAGA+CGG | 0.561802 | 1_2:-6447972 | None:intergenic |
| ACCGACGGCGTAACTGTCAC+CGG | 0.564809 | 1_2:-6447291 | None:intergenic |
| TCCGGCAAGGTTCTTGCAAG+AGG | 0.568553 | 1_2:+6447941 | Msa0052260:CDS |
| TGATTCTGTTGTGATTTCGC+CGG | 0.570077 | 1_2:-6447633 | None:intergenic |
| GCGCTTCGGTCGCTCCTGAG+AGG | 0.572968 | 1_2:-6449610 | None:intergenic |
| TATATACCTTCGGTAACAGT+AGG | 0.574204 | 1_2:-6449887 | None:intergenic |
| CTGCTTCTCCAAGTAAGCTA+GGG | 0.575742 | 1_2:+6448126 | Msa0052260:CDS |
| CGCGGTGTGAGTCCTTGCCG+TGG | 0.577170 | 1_2:+6448173 | Msa0052260:CDS |
| TTCGGCACCAAAAGCTTCGG+AGG | 0.579043 | 1_2:-6448014 | None:intergenic |
| TAACATCATAAGTATAACAT+AGG | 0.581440 | 1_2:+6451043 | Msa0052260:three_prime_UTR |
| GAAAAGAACTAACTCGCCAT+TGG | 0.584363 | 1_2:+6447227 | Msa0052260:CDS |
| AGTCCTTGCCGTGGAAGAAA+CGG | 0.584401 | 1_2:+6448182 | Msa0052260:CDS |
| TTGGGTATGAATTAATGAAG+AGG | 0.587803 | 1_2:-6446882 | None:intergenic |
| ACCGAAAATGTGAAGGTGGA+AGG | 0.587881 | 1_2:-6446713 | None:intergenic |
| GACTGAGATCGTTTCACCGA+CGG | 0.589591 | 1_2:-6447306 | None:intergenic |
| GTAACACTTTCATTATCAGA+AGG | 0.591803 | 1_2:-6447846 | None:intergenic |
| GGAAAAGTACACCGGAGAGG+AGG | 0.592441 | 1_2:+6447502 | Msa0052260:CDS |
| TACATAACAGGCTTATGCAA+TGG | 0.595217 | 1_2:+6448327 | Msa0052260:CDS |
| TAGGCATATGGAGGATGCCA+TGG | 0.595245 | 1_2:-6449868 | None:intergenic |
| TTCACCGTTCTATTCACCAA+TGG | 0.595880 | 1_2:-6447243 | None:intergenic |
| AAATTCGATTTCTAGGTCAG+TGG | 0.597586 | 1_2:+6447596 | Msa0052260:CDS |
| ATTGCATTGTCCGATTCAGA+AGG | 0.598126 | 1_2:-6447117 | None:intergenic |
| CTAGGTCAGTGGATCAGCAC+CGG | 0.601366 | 1_2:+6447607 | Msa0052260:CDS |
| AGGACTCACACCGCGCGAAG+GGG | 0.602977 | 1_2:-6448165 | None:intergenic |
| TAGCTACCCAAGCACCATAG+AGG | 0.603348 | 1_2:-6449036 | None:intergenic |
| GGTCAGTGGATCAGCACCGG+TGG | 0.608767 | 1_2:+6447610 | Msa0052260:CDS |
| AAGTACACCGGAGAGGAGGA+AGG | 0.611409 | 1_2:+6447506 | Msa0052260:CDS |
| CTCGCCATTGGTGAATAGAA+CGG | 0.612901 | 1_2:+6447239 | Msa0052260:CDS |
| GGAGTCTCACCATTAGGCCG+AGG | 0.613090 | 1_2:-6447360 | None:intergenic |
| TCGGCCTAATGGTGAGACTC+CGG | 0.614526 | 1_2:+6447362 | Msa0052260:CDS |
| TCATACTTGCTCATTCAGGA+TGG | 0.615410 | 1_2:-6449134 | None:intergenic |
| GGGGAAAATTGGAGAGAACA+GGG | 0.616709 | 1_2:+6448277 | Msa0052260:CDS |
| ACACCGTTTCTTCCACGGCA+AGG | 0.617821 | 1_2:-6448185 | None:intergenic |
| ATTTAACACCGAAAATGTGA+AGG | 0.618410 | 1_2:-6446720 | None:intergenic |
| AAACTCTGCACCGTCGCTGG+CGG | 0.621343 | 1_2:-6447477 | None:intergenic |
| ACACCGCGCGAAGGGGACCT+CGG | 0.621540 | 1_2:-6448158 | None:intergenic |
| ACAACACCGACAATTGGAAG+AGG | 0.623276 | 1_2:+6447543 | Msa0052260:CDS |
| AAATGTGAAGGTGGAAGGTG+AGG | 0.630135 | 1_2:-6446708 | None:intergenic |
| ACGGCAAAACTCAAAACAGA+AGG | 0.630720 | 1_2:-6448242 | None:intergenic |
| AATGGATGTGATGCAGGCCA+TGG | 0.630875 | 1_2:+6449851 | Msa0052260:CDS |
| CGATTATTCAAAATTCCTCG+TGG | 0.631530 | 1_2:-6448068 | None:intergenic |
| ATCGCTCGAGCTGATCGTTG+CGG | 0.631817 | 1_2:-6447912 | None:intergenic |
| GGCAACGGCAAGGTACTCCT+CGG | 0.635107 | 1_2:+6447343 | Msa0052260:CDS |
| TGTGCAGACACTGAATTCTG+AGG | 0.635950 | 1_2:+6448385 | Msa0052260:CDS |
| ATTGGAAGAGGAAGAGTGAA+CGG | 0.637041 | 1_2:+6447555 | Msa0052260:CDS |
| GCCGGTGACAGTTACGCCGT+CGG | 0.640758 | 1_2:+6447290 | Msa0052260:CDS |
| TCACCGAGGTCCCCTTCGCG+CGG | 0.643495 | 1_2:+6448155 | Msa0052260:CDS |
| CGGTAACAGTAGGCATATGG+AGG | 0.643850 | 1_2:-6449877 | None:intergenic |
| AGTTGTCAGCATAAGTGCAA+AGG | 0.647548 | 1_2:+6450719 | Msa0052260:CDS |
| AGATCTACTGAATTTGAAGG+AGG | 0.651994 | 1_2:+6449815 | Msa0052260:CDS |
| TAACACCGAAAATGTGAAGG+TGG | 0.652493 | 1_2:-6446717 | None:intergenic |
| GAGCGGCAGAGGCAACGGCA+AGG | 0.654833 | 1_2:+6447333 | Msa0052260:CDS |
| ATGAATAGAAGCTTGGATTG+TGG | 0.664306 | 1_2:+6447666 | Msa0052260:CDS |
| GAGTTTGAGGAAAAGTACAC+CGG | 0.667037 | 1_2:+6447494 | Msa0052260:CDS |
| CATATGCCTACTGTTACCGA+AGG | 0.667961 | 1_2:+6449881 | Msa0052260:CDS |
| ACACCTTCATAACAACGTAA+CGG | 0.669634 | 1_2:+6446834 | Msa0052260:five_prime_UTR |
| AACGATCTCAGTCGACGGAG+CGG | 0.670815 | 1_2:+6447316 | Msa0052260:CDS |
| GCAATGTGGTTAGGTCATTG+CGG | 0.674795 | 1_2:+6447721 | Msa0052260:CDS |
| AAATGTTGTTTACTTCGGCG+AGG | 0.676953 | 1_2:+6447394 | Msa0052260:CDS |
| GATCCTCGAGTTTCTCACGA+TGG | 0.678747 | 1_2:+6447756 | Msa0052260:CDS |
| GGTGAAACGATCTCAGTCGA+CGG | 0.679372 | 1_2:+6447311 | Msa0052260:CDS |
| TCCGATTCAGAAGGTAACAA+CGG | 0.679861 | 1_2:-6447108 | None:intergenic |
| GAATGGATTTGGAAGCAATG+TGG | 0.680388 | 1_2:+6447707 | Msa0052260:CDS |
| AATCCGTCTTCGAGAAACGG+TGG | 0.680618 | 1_2:+6447969 | Msa0052260:CDS |
| TGAGGAAAAGTACACCGGAG+AGG | 0.704881 | 1_2:+6447499 | Msa0052260:CDS |
| GCACCATCGTGAGAAACTCG+AGG | 0.706819 | 1_2:-6447759 | None:intergenic |
| TCATAAGTATAACATAGGAG+TGG | 0.708231 | 1_2:+6451048 | Msa0052260:three_prime_UTR |
| TTGCCGTTGATGTTCCAAGG+GGG | 0.732369 | 1_2:+6448258 | Msa0052260:CDS |
| AGTCCTGCATCGTCTCCACG+AGG | 0.738290 | 1_2:+6448053 | Msa0052260:CDS |
| TTTGCCGTTGATGTTCCAAG+GGG | 0.738628 | 1_2:+6448257 | Msa0052260:CDS |
| GAGACAGAAATTGACGACGC+CGG | 0.740637 | 1_2:+6447272 | Msa0052260:CDS |
| AGCTAGGGATGCCATCACCG+AGG | 0.744783 | 1_2:+6448141 | Msa0052260:CDS |
| GATTCAGAAGGTAACAACGG+TGG | 0.747196 | 1_2:-6447105 | None:intergenic |
| AGAGAGCATCAACACCAACG+AGG | 0.758781 | 1_2:+6447082 | Msa0052260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGAAAGAAAAAAAAA+TGG | + | chr1_2:6447020-6447039 | Msa0052260:exon | 10.0% |
| !!! | TTTATTTATTTTTTGCTATT+TGG | + | chr1_2:6448586-6448605 | Msa0052260:intron | 10.0% |
| !!! | ATTTTCATATTTTCATTTTA+TGG | + | chr1_2:6450599-6450618 | Msa0052260:intron | 10.0% |
| !!! | TCTTTTTCAAATTTCAAATT+TGG | + | chr1_2:6448415-6448434 | Msa0052260:intron | 15.0% |
| !! | AAAAAAAATCAAGAAGATTA+CGG | - | chr1_2:6450557-6450576 | None:intergenic | 15.0% |
| !!! | TTGATAAAATTCGTTTTTAT+TGG | + | chr1_2:6450902-6450921 | Msa0052260:intron | 15.0% |
| !!! | TACATGTTAATTGATTTTTT+TGG | + | chr1_2:6451257-6451276 | Msa0052260:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGGTTGTATTTATT+AGG | + | chr1_2:6451271-6451290 | Msa0052260:three_prime_UTR | 15.0% |
| !! | TTATGCTATTAATATTCTAC+TGG | + | chr1_2:6448627-6448646 | Msa0052260:intron | 20.0% |
| !! | AAATAATGTCAACAATATCA+AGG | - | chr1_2:6448759-6448778 | None:intergenic | 20.0% |
| !!! | GTTGACATTATTTAAAACTT+TGG | + | chr1_2:6448766-6448785 | Msa0052260:intron | 20.0% |
| !!! | ATATGTTTTGTTTTCCATTT+TGG | + | chr1_2:6448946-6448965 | Msa0052260:intron | 20.0% |
| !! | TGACACAAATATCTAAATAA+TGG | - | chr1_2:6449231-6449250 | None:intergenic | 20.0% |
| !! | TAAGAAATAAAGCAATAAAC+AGG | - | chr1_2:6449698-6449717 | None:intergenic | 20.0% |
| !!! | AGTTTTAATGGTTCATATAT+AGG | + | chr1_2:6450112-6450131 | Msa0052260:intron | 20.0% |
| !!! | TCTTAAAATATTTTCTGTGA+TGG | - | chr1_2:6450276-6450295 | None:intergenic | 20.0% |
| !! | TAAGTTATCAAACAAATCAT+TGG | + | chr1_2:6450300-6450319 | Msa0052260:intron | 20.0% |
| !!! | TAGGGTTTTATAATATGTTA+AGG | - | chr1_2:6450410-6450429 | None:intergenic | 20.0% |
| !! | TTACATTTACAACCTATAAA+TGG | - | chr1_2:6450683-6450702 | None:intergenic | 20.0% |
| !! | TAATAATTGACAAAAGATCT+TGG | - | chr1_2:6450767-6450786 | None:intergenic | 20.0% |
| !! | TAACATCATAAGTATAACAT+AGG | + | chr1_2:6451043-6451062 | Msa0052260:three_prime_UTR | 20.0% |
| !! | ATTTGACAATTAAGGATATA+AGG | - | chr1_2:6451212-6451231 | None:intergenic | 20.0% |
| !! | TATACATCATTTGACAATTA+AGG | - | chr1_2:6451220-6451239 | None:intergenic | 20.0% |
| !!! | CCAAGTTGTATATTTTTATA+CGG | + | chr1_2:6451389-6451408 | Msa0052260:three_prime_UTR | 20.0% |
| !! | TCAGAAAATGTTGTTTACTT+CGG | + | chr1_2:6447389-6447408 | Msa0052260:CDS | 25.0% |
| ! | AAACAGAAAATTCGATTTCT+AGG | + | chr1_2:6447589-6447608 | Msa0052260:CDS | 25.0% |
| ! | TTATTAATGTTGTGATTGCT+TGG | + | chr1_2:6448458-6448477 | Msa0052260:intron | 25.0% |
| ! | TATTAATGTTGTGATTGCTT+GGG | + | chr1_2:6448459-6448478 | Msa0052260:intron | 25.0% |
| !!! | ACTCTTTGAAGTTGTATTTA+AGG | + | chr1_2:6448660-6448679 | Msa0052260:intron | 25.0% |
| !! | ATTTAAAACTTTGGCTGTAT+TGG | + | chr1_2:6448775-6448794 | Msa0052260:intron | 25.0% |
| !! | TTTAAAACTTTGGCTGTATT+GGG | + | chr1_2:6448776-6448795 | Msa0052260:intron | 25.0% |
| ! | CTCAGTCAAAAAGATAAAAA+AGG | - | chr1_2:6448869-6448888 | None:intergenic | 25.0% |
| ! | GTGAAGATCAATTCATATAT+AGG | + | chr1_2:6448901-6448920 | Msa0052260:intron | 25.0% |
| ! | CTGATACAAGAAAGAATATT+AGG | - | chr1_2:6449011-6449030 | None:intergenic | 25.0% |
| !! | CAACTGTAACTTTATTCTTT+TGG | - | chr1_2:6449089-6449108 | None:intergenic | 25.0% |
| !! | AGGATAGTATGTATACATTT+TGG | - | chr1_2:6449421-6449440 | None:intergenic | 25.0% |
| ! | AGCATGTATGAAAAAAGAAA+AGG | - | chr1_2:6449441-6449460 | None:intergenic | 25.0% |
| !! | TTTTACTCAGATGATCTATT+TGG | + | chr1_2:6449550-6449569 | Msa0052260:intron | 25.0% |
| ! | AAGAGAAAAGAAAAATACCT+TGG | - | chr1_2:6449675-6449694 | None:intergenic | 25.0% |
| ! | TATTAGCTATTAGCATATCT+GGG | + | chr1_2:6449758-6449777 | Msa0052260:intron | 25.0% |
| !!! | TAAAAGCACAGAAGTTTTAA+TGG | + | chr1_2:6450100-6450119 | Msa0052260:intron | 25.0% |
| !! | AAAATATTTTCTGTGATGGT+GGG | - | chr1_2:6450272-6450291 | None:intergenic | 25.0% |
| !! | TAAAATATTTTCTGTGATGG+TGG | - | chr1_2:6450273-6450292 | None:intergenic | 25.0% |
| ! | TACACCACATATTTATTTAG+AGG | + | chr1_2:6450513-6450532 | Msa0052260:intron | 25.0% |
| !!! | ATGCAGGTAAGTTTTATATT+CGG | + | chr1_2:6450792-6450811 | Msa0052260:intron | 25.0% |
| !!! | TAAAATTCGTTTTTATTGGC+AGG | + | chr1_2:6450906-6450925 | Msa0052260:intron | 25.0% |
| !!! | TAACTTTTTCATGTAACTGA+GGG | - | chr1_2:6451369-6451388 | None:intergenic | 25.0% |
| ! | CCGTATAAAAATATACAACT+TGG | - | chr1_2:6451392-6451411 | None:intergenic | 25.0% |
| !!! | TGTATATTTTTATACGGTGT+AGG | + | chr1_2:6451395-6451414 | Msa0052260:three_prime_UTR | 25.0% |
| ATTTAACACCGAAAATGTGA+AGG | - | chr1_2:6446723-6446742 | None:intergenic | 30.0% | |
| TTGGGTATGAATTAATGAAG+AGG | - | chr1_2:6446885-6446904 | None:intergenic | 30.0% | |
| ACTCTCAACGTTAAATTTCT+AGG | + | chr1_2:6446939-6446958 | Msa0052260:five_prime_UTR | 30.0% | |
| CTCTCAACGTTAAATTTCTA+GGG | + | chr1_2:6446940-6446959 | Msa0052260:five_prime_UTR | 30.0% | |
| !! | TAAATTTCTAGGGTTGGTAA+TGG | + | chr1_2:6446950-6446969 | Msa0052260:five_prime_UTR | 30.0% |
| GAATTTCATGAATAGAAGCT+TGG | + | chr1_2:6447659-6447678 | Msa0052260:CDS | 30.0% | |
| !! | GTTTTGTTGAGAAATTCGAA+TGG | + | chr1_2:6447690-6447709 | Msa0052260:CDS | 30.0% |
| ! | TTGAGAAATTCGAATGGATT+TGG | + | chr1_2:6447696-6447715 | Msa0052260:CDS | 30.0% |
| AGATCAGAAAGCAACAAAAA+TGG | + | chr1_2:6447789-6447808 | Msa0052260:CDS | 30.0% | |
| GTAACACTTTCATTATCAGA+AGG | - | chr1_2:6447849-6447868 | None:intergenic | 30.0% | |
| !! | GATAATGAAAGTGTTACTTC+TGG | + | chr1_2:6447852-6447871 | Msa0052260:CDS | 30.0% |
| !!! | CTATCGAACACTGATTTTTT+CGG | - | chr1_2:6448035-6448054 | None:intergenic | 30.0% |
| ! | CACGAGGAATTTTGAATAAT+CGG | + | chr1_2:6448069-6448088 | Msa0052260:CDS | 30.0% |
| ! | ATTTTGAATAATCGGTTGCA+AGG | + | chr1_2:6448077-6448096 | Msa0052260:CDS | 30.0% |
| AGAAATGTTCTCTGCTAAAA+TGG | - | chr1_2:6448563-6448582 | None:intergenic | 30.0% | |
| TTGTCCATTTGTATCATTAC+TGG | + | chr1_2:6449315-6449334 | Msa0052260:intron | 30.0% | |
| TGTCCATTTGTATCATTACT+GGG | + | chr1_2:6449316-6449335 | Msa0052260:intron | 30.0% | |
| !!! | TCTTTTTTCATACATGCTTG+AGG | + | chr1_2:6449443-6449462 | Msa0052260:intron | 30.0% |
| TTTACTTGCAGTTGTAGATA+AGG | + | chr1_2:6449468-6449487 | Msa0052260:intron | 30.0% | |
| AGTTGTAGATAAGGTGAATA+TGG | + | chr1_2:6449477-6449496 | Msa0052260:intron | 30.0% | |
| AGATGATCTATTTGGAAGAT+TGG | + | chr1_2:6449558-6449577 | Msa0052260:intron | 30.0% | |
| GATGATCTATTTGGAAGATT+GGG | + | chr1_2:6449559-6449578 | Msa0052260:intron | 30.0% | |
| CTATTAGCTATTAGCATATC+TGG | + | chr1_2:6449757-6449776 | Msa0052260:intron | 30.0% | |
| ATTAGCTATTAGCATATCTG+GGG | + | chr1_2:6449759-6449778 | Msa0052260:intron | 30.0% | |
| GATAGATCTACTGAATTTGA+AGG | + | chr1_2:6449812-6449831 | Msa0052260:intron | 30.0% | |
| GCAAAAGGATTATATACCTT+CGG | - | chr1_2:6449900-6449919 | None:intergenic | 30.0% | |
| TTATATTTGTGACGAAGTGA+TGG | + | chr1_2:6449950-6449969 | Msa0052260:intron | 30.0% | |
| TTCAAAGACTATTGAAAAGC+TGG | - | chr1_2:6449996-6450015 | None:intergenic | 30.0% | |
| AATCATTGGTGTGATACAAA+AGG | + | chr1_2:6450314-6450333 | Msa0052260:intron | 30.0% | |
| AGCTGTGTTAAGTATAGTTT+CGG | - | chr1_2:6450448-6450467 | None:intergenic | 30.0% | |
| ACCACATATTTATTTAGAGG+TGG | + | chr1_2:6450516-6450535 | Msa0052260:intron | 30.0% | |
| ACCACCTCTAAATAAATATG+TGG | - | chr1_2:6450520-6450539 | None:intergenic | 30.0% | |
| ! | TTTTATGGATAACCAGCATT+TGG | + | chr1_2:6450614-6450633 | Msa0052260:intron | 30.0% |
| TTTATGGATAACCAGCATTT+GGG | + | chr1_2:6450615-6450634 | Msa0052260:intron | 30.0% | |
| !! | TGAAAGCATTCTCCATTTAT+AGG | + | chr1_2:6450668-6450687 | Msa0052260:intron | 30.0% |
| GTCAATTATTAGAACTATGC+AGG | + | chr1_2:6450776-6450795 | Msa0052260:CDS | 30.0% | |
| !! | TGCAGGTAAGTTTTATATTC+GGG | + | chr1_2:6450793-6450812 | Msa0052260:intron | 30.0% |
| GTACTTGTCTTGAATTTCAT+TGG | + | chr1_2:6450839-6450858 | Msa0052260:intron | 30.0% | |
| TTCATTGGATGATATTGTTG+TGG | + | chr1_2:6450854-6450873 | Msa0052260:intron | 30.0% | |
| TTTGTATACTATGCGATATC+AGG | - | chr1_2:6450945-6450964 | None:intergenic | 30.0% | |
| TCATAAGTATAACATAGGAG+TGG | + | chr1_2:6451048-6451067 | Msa0052260:three_prime_UTR | 30.0% | |
| GTCTAACACGTATTTGTATA+TGG | + | chr1_2:6451318-6451337 | Msa0052260:three_prime_UTR | 30.0% | |
| !!! | AACTTTTTCATGTAACTGAG+GGG | - | chr1_2:6451368-6451387 | None:intergenic | 30.0% |
| !!! | GTAACTTTTTCATGTAACTG+AGG | - | chr1_2:6451370-6451389 | None:intergenic | 30.0% |
| !!! | GTGATTGTGGTTTTGGATTT+GGG | - | chr1_2:6446749-6446768 | None:intergenic | 35.0% |
| !!! | TGTGATTGTGGTTTTGGATT+TGG | - | chr1_2:6446750-6446769 | None:intergenic | 35.0% |
| ACACCTTCATAACAACGTAA+CGG | + | chr1_2:6446834-6446853 | Msa0052260:five_prime_UTR | 35.0% | |
| !!! | AATTGCGAGCGTGATTTTTT+GGG | - | chr1_2:6446903-6446922 | None:intergenic | 35.0% |
| !!! | AAATTGCGAGCGTGATTTTT+TGG | - | chr1_2:6446904-6446923 | None:intergenic | 35.0% |
| !! | CAACGTTAAATTTCTAGGGT+TGG | + | chr1_2:6446944-6446963 | Msa0052260:five_prime_UTR | 35.0% |
| !! | AATGGCGAGTTAGTTCTTTT+CGG | - | chr1_2:6447228-6447247 | None:intergenic | 35.0% |
| ! | AACAACATTTTCTGAGCAAC+CGG | - | chr1_2:6447384-6447403 | None:intergenic | 35.0% |
| AGTTTATCCGTTTCGTTTCA+GGG | + | chr1_2:6447417-6447436 | Msa0052260:CDS | 35.0% | |
| ! | AAATTCGATTTCTAGGTCAG+TGG | + | chr1_2:6447596-6447615 | Msa0052260:CDS | 35.0% |
| ATGAATAGAAGCTTGGATTG+TGG | + | chr1_2:6447666-6447685 | Msa0052260:CDS | 35.0% | |
| TCAGAAAGCAACAAAAATGG+TGG | + | chr1_2:6447792-6447811 | Msa0052260:CDS | 35.0% | |
| TTATCAGAAGGAACAAGTTC+AGG | - | chr1_2:6447837-6447856 | None:intergenic | 35.0% | |
| CGATTATTCAAAATTCCTCG+TGG | - | chr1_2:6448071-6448090 | None:intergenic | 35.0% | |
| ATTGCATAAGCCTGTTATGT+AGG | - | chr1_2:6448328-6448347 | None:intergenic | 35.0% | |
| TACATAACAGGCTTATGCAA+TGG | + | chr1_2:6448327-6448346 | Msa0052260:CDS | 35.0% | |
| ! | ATTTTGTGTTGAGTTTCGTG+TGG | + | chr1_2:6448494-6448513 | Msa0052260:intron | 35.0% |
| ! | GTGGATTGTATGGATGTTAA+TGG | + | chr1_2:6448513-6448532 | Msa0052260:intron | 35.0% |
| TGTCAACAATATCAAGGACA+AGG | - | chr1_2:6448753-6448772 | None:intergenic | 35.0% | |
| !!! | TGTTTTCCATTTTGGTTGTC+TGG | + | chr1_2:6448954-6448973 | Msa0052260:intron | 35.0% |
| TTGTATCAGAAAAGCCTCTA+TGG | + | chr1_2:6449022-6449041 | Msa0052260:intron | 35.0% | |
| AAATTCAGCACATGTAGCTA+AGG | - | chr1_2:6449161-6449180 | None:intergenic | 35.0% | |
| GAATGATTGTTGCTCTATGA+AGG | - | chr1_2:6449260-6449279 | None:intergenic | 35.0% | |
| ATAGAGCAACAATCATTCCA+TGG | + | chr1_2:6449262-6449281 | Msa0052260:intron | 35.0% | |
| AACAATCATTCCATGGCATT+TGG | + | chr1_2:6449269-6449288 | Msa0052260:intron | 35.0% | |
| !! | ATTAGCTTTGCTCATTTGTG+CGG | + | chr1_2:6449342-6449361 | Msa0052260:intron | 35.0% |
| CTATCTGTAGCAAAATACAG+TGG | - | chr1_2:6449797-6449816 | None:intergenic | 35.0% | |
| AGATCTACTGAATTTGAAGG+AGG | + | chr1_2:6449815-6449834 | Msa0052260:CDS | 35.0% | |
| TATATACCTTCGGTAACAGT+AGG | - | chr1_2:6449890-6449909 | None:intergenic | 35.0% | |
| CAACATTCATTATGGCAGTA+TGG | - | chr1_2:6449922-6449941 | None:intergenic | 35.0% | |
| CATACTGCCATAATGAATGT+TGG | + | chr1_2:6449920-6449939 | Msa0052260:intron | 35.0% | |
| TCGAGATCCAACATTCATTA+TGG | - | chr1_2:6449930-6449949 | None:intergenic | 35.0% | |
| !! | CAATAGTCTTTGAAATTCCC+AGG | + | chr1_2:6450002-6450021 | Msa0052260:intron | 35.0% |
| TTGTGGTAGAAAATCAACTG+AGG | + | chr1_2:6450036-6450055 | Msa0052260:intron | 35.0% | |
| !!! | GCTTTTATTTTCTGCTTGCT+TGG | - | chr1_2:6450087-6450106 | None:intergenic | 35.0% |
| GAAGACAAGAGAATTTGAAG+TGG | - | chr1_2:6450225-6450244 | None:intergenic | 35.0% | |
| AATTCTCTTGTCTTCTGTAC+TGG | + | chr1_2:6450230-6450249 | Msa0052260:intron | 35.0% | |
| TGCAATTCTTAGTAGATGAC+AGG | - | chr1_2:6450346-6450365 | None:intergenic | 35.0% | |
| ! | CGGATGAATCTAAAAGCATA+GGG | - | chr1_2:6450428-6450447 | None:intergenic | 35.0% |
| ! | TCGGATGAATCTAAAAGCAT+AGG | - | chr1_2:6450429-6450448 | None:intergenic | 35.0% |
| ! | TTTGGGATTTCAAACTTAGC+AGG | + | chr1_2:6450482-6450501 | Msa0052260:intron | 35.0% |
| TTGGGATTTCAAACTTAGCA+GGG | + | chr1_2:6450483-6450502 | Msa0052260:intron | 35.0% | |
| AATTGCTAAATCCCAAATGC+TGG | - | chr1_2:6450629-6450648 | None:intergenic | 35.0% | |
| ! | AGCATTTGGGATTTAGCAAT+TGG | + | chr1_2:6450628-6450647 | Msa0052260:intron | 35.0% |
| GGTTGTAAATGTAAAGTCAC+TGG | + | chr1_2:6450689-6450708 | Msa0052260:intron | 35.0% | |
| !! | CAATTTCATTGCTGACTTCT+AGG | - | chr1_2:6450979-6450998 | None:intergenic | 35.0% |
| ! | ATAGGAGTGGTTAGTTAGTT+TGG | + | chr1_2:6451061-6451080 | Msa0052260:three_prime_UTR | 35.0% |
| GCTGAATTCAATCCATGAAA+CGG | + | chr1_2:6451085-6451104 | Msa0052260:three_prime_UTR | 35.0% | |
| AATCAATCAAGACCGTTTCA+TGG | - | chr1_2:6451100-6451119 | None:intergenic | 35.0% | |
| CTTGATTGATTAGCATAGTG+AGG | + | chr1_2:6451109-6451128 | Msa0052260:three_prime_UTR | 35.0% | |
| GGAATTTGTCGTTCTTCAAA+TGG | + | chr1_2:6451151-6451170 | Msa0052260:three_prime_UTR | 35.0% | |
| ! | ACCTTCCACCTTCACATTTT+CGG | + | chr1_2:6446712-6446731 | Msa0052260:five_prime_UTR | 40.0% |
| TAACACCGAAAATGTGAAGG+TGG | - | chr1_2:6446720-6446739 | None:intergenic | 40.0% | |
| ! | CGTGATTGTGATTGTGGTTT+TGG | - | chr1_2:6446756-6446775 | None:intergenic | 40.0% |
| TGACCGTTACGTTGTTATGA+AGG | - | chr1_2:6446840-6446859 | None:intergenic | 40.0% | |
| ACCGTTGTTACCTTCTGAAT+CGG | + | chr1_2:6447107-6447126 | Msa0052260:CDS | 40.0% | |
| TCCGATTCAGAAGGTAACAA+CGG | - | chr1_2:6447111-6447130 | None:intergenic | 40.0% | |
| ATTGCATTGTCCGATTCAGA+AGG | - | chr1_2:6447120-6447139 | None:intergenic | 40.0% | |
| GAAGTAACTTCTCGTGCTTT+CGG | - | chr1_2:6447153-6447172 | None:intergenic | 40.0% | |
| GAAAAGAACTAACTCGCCAT+TGG | + | chr1_2:6447227-6447246 | Msa0052260:CDS | 40.0% | |
| TTCACCGTTCTATTCACCAA+TGG | - | chr1_2:6447246-6447265 | None:intergenic | 40.0% | |
| ! | AAATGTTGTTTACTTCGGCG+AGG | + | chr1_2:6447394-6447413 | Msa0052260:CDS | 40.0% |
| GAGTTTATCCGTTTCGTTTC+AGG | + | chr1_2:6447416-6447435 | Msa0052260:CDS | 40.0% | |
| ! | GAGTTTGAGGAAAAGTACAC+CGG | + | chr1_2:6447494-6447513 | Msa0052260:CDS | 40.0% |
| ACTCTTCCTCTTCCAATTGT+CGG | - | chr1_2:6447552-6447571 | None:intergenic | 40.0% | |
| ATTGGAAGAGGAAGAGTGAA+CGG | + | chr1_2:6447555-6447574 | Msa0052260:CDS | 40.0% | |
| TGATTCTGTTGTGATTTCGC+CGG | - | chr1_2:6447636-6447655 | None:intergenic | 40.0% | |
| ! | GAATGGATTTGGAAGCAATG+TGG | + | chr1_2:6447707-6447726 | Msa0052260:CDS | 40.0% |
| GATTTGGAAGCAATGTGGTT+AGG | + | chr1_2:6447712-6447731 | Msa0052260:CDS | 40.0% | |
| GTCATTGCGGAATTCGTTAT+TGG | + | chr1_2:6447734-6447753 | Msa0052260:CDS | 40.0% | |
| GTTACTTCTGGTAGTTCTTC+TGG | + | chr1_2:6447864-6447883 | Msa0052260:CDS | 40.0% | |
| ACTAATCCGTCTTCGAGAAA+CGG | + | chr1_2:6447966-6447985 | Msa0052260:CDS | 40.0% | |
| !! | TTTTTCGGCACCAAAAGCTT+CGG | - | chr1_2:6448020-6448039 | None:intergenic | 40.0% |
| ACGGCAAAACTCAAAACAGA+AGG | - | chr1_2:6448245-6448264 | None:intergenic | 40.0% | |
| ! | TTTTGCCGTTGATGTTCCAA+GGG | + | chr1_2:6448256-6448275 | Msa0052260:CDS | 40.0% |
| CATTGAGACTCCTACATAAC+AGG | + | chr1_2:6448315-6448334 | Msa0052260:CDS | 40.0% | |
| ATTCAGTGTCTGCACAGAAA+GGG | - | chr1_2:6448381-6448400 | None:intergenic | 40.0% | |
| AATTCAGTGTCTGCACAGAA+AGG | - | chr1_2:6448382-6448401 | None:intergenic | 40.0% | |
| ! | TGAGTTTCGTGTGGATTGTA+TGG | + | chr1_2:6448503-6448522 | Msa0052260:intron | 40.0% |
| !!! | TTCCATTTTGGTTGTCTGGT+TGG | + | chr1_2:6448958-6448977 | Msa0052260:intron | 40.0% |
| AACCAACCAGACAACCAAAA+TGG | - | chr1_2:6448963-6448982 | None:intergenic | 40.0% | |
| TCATACTTGCTCATTCAGGA+TGG | - | chr1_2:6449137-6449156 | None:intergenic | 40.0% | |
| AGGATCATACTTGCTCATTC+AGG | - | chr1_2:6449141-6449160 | None:intergenic | 40.0% | |
| GTGCCCAGTAATGATACAAA+TGG | - | chr1_2:6449322-6449341 | None:intergenic | 40.0% | |
| TGTTCTCTGATAGAGGTTAC+TGG | + | chr1_2:6449368-6449387 | Msa0052260:intron | 40.0% | |
| GTTCTCTGATAGAGGTTACT+GGG | + | chr1_2:6449369-6449388 | Msa0052260:intron | 40.0% | |
| TTTGGAAGATTGGGCTATTC+TGG | + | chr1_2:6449568-6449587 | Msa0052260:CDS | 40.0% | |
| AAGATTGGGCTATTCTGGAT+CGG | + | chr1_2:6449573-6449592 | Msa0052260:CDS | 40.0% | |
| ACCAAAAACAGGAAGACGTA+GGG | - | chr1_2:6449648-6449667 | None:intergenic | 40.0% | |
| CATTATGGCAGTATGGCAAA+AGG | - | chr1_2:6449915-6449934 | None:intergenic | 40.0% | |
| CCACAATCATAATCTAGCCT+GGG | - | chr1_2:6450022-6450041 | None:intergenic | 40.0% | |
| ACCACAATCATAATCTAGCC+TGG | - | chr1_2:6450023-6450042 | None:intergenic | 40.0% | |
| AGTTGTCAGCATAAGTGCAA+AGG | + | chr1_2:6450719-6450738 | Msa0052260:CDS | 40.0% | |
| TTGGATGATATTGTTGTGGC+AGG | + | chr1_2:6450858-6450877 | Msa0052260:intron | 40.0% | |
| ! | ATTGTCTGACCTGTCCTTTT+TGG | + | chr1_2:6451015-6451034 | Msa0052260:three_prime_UTR | 40.0% |
| ! | TTGTCTGACCTGTCCTTTTT+GGG | + | chr1_2:6451016-6451035 | Msa0052260:three_prime_UTR | 40.0% |
| ATGATGTTAGCACCCCAAAA+AGG | - | chr1_2:6451032-6451051 | None:intergenic | 40.0% | |
| GGATTGCAAAGTGTGAAGAT+TGG | + | chr1_2:6451130-6451149 | Msa0052260:three_prime_UTR | 40.0% | |
| AAATGTGAAGGTGGAAGGTG+AGG | - | chr1_2:6446711-6446730 | None:intergenic | 45.0% | |
| ACCGAAAATGTGAAGGTGGA+AGG | - | chr1_2:6446716-6446735 | None:intergenic | 45.0% | |
| GATTCAGAAGGTAACAACGG+TGG | - | chr1_2:6447108-6447127 | None:intergenic | 45.0% | |
| CTCGCCATTGGTGAATAGAA+CGG | + | chr1_2:6447239-6447258 | Msa0052260:CDS | 45.0% | |
| CGATTCTCCCTGAAACGAAA+CGG | - | chr1_2:6447427-6447446 | None:intergenic | 45.0% | |
| ACGGTTACAACACCGACAAT+TGG | + | chr1_2:6447537-6447556 | Msa0052260:CDS | 45.0% | |
| ACAACACCGACAATTGGAAG+AGG | + | chr1_2:6447543-6447562 | Msa0052260:CDS | 45.0% | |
| GCAATGTGGTTAGGTCATTG+CGG | + | chr1_2:6447721-6447740 | Msa0052260:CDS | 45.0% | |
| !! | CAAAAATGGTGGATCTGAGC+AGG | + | chr1_2:6447803-6447822 | Msa0052260:CDS | 45.0% |
| !! | TGGTAGTTCTTCTGGAGTAC+AGG | + | chr1_2:6447872-6447891 | Msa0052260:CDS | 45.0% |
| !! | TCTTCTGGAGTACAGGAGTT+TGG | + | chr1_2:6447879-6447898 | Msa0052260:CDS | 45.0% |
| ATTCCACCGTTTCTCGAAGA+CGG | - | chr1_2:6447975-6447994 | None:intergenic | 45.0% | |
| TCTTCGAGAAACGGTGGAAT+TGG | + | chr1_2:6447975-6447994 | Msa0052260:CDS | 45.0% | |
| ! | AACAGTTCCTCCGAAGCTTT+TGG | + | chr1_2:6448007-6448026 | Msa0052260:CDS | 45.0% |
| CTGCTTCTCCAAGTAAGCTA+GGG | + | chr1_2:6448126-6448145 | Msa0052260:CDS | 45.0% | |
| TAGCAACACCGTTTCTTCCA+CGG | - | chr1_2:6448193-6448212 | None:intergenic | 45.0% | |
| ! | GTTTTGCCGTTGATGTTCCA+AGG | + | chr1_2:6448255-6448274 | Msa0052260:CDS | 45.0% |
| TTTGCCGTTGATGTTCCAAG+GGG | + | chr1_2:6448257-6448276 | Msa0052260:CDS | 45.0% | |
| TTTCCCCCTTGGAACATCAA+CGG | - | chr1_2:6448264-6448283 | None:intergenic | 45.0% | |
| GATGTTCCAAGGGGGAAAAT+TGG | + | chr1_2:6448266-6448285 | Msa0052260:CDS | 45.0% | |
| ! | TTCTCTCCAATTTTCCCCCT+TGG | - | chr1_2:6448275-6448294 | None:intergenic | 45.0% |
| GGGGAAAATTGGAGAGAACA+GGG | + | chr1_2:6448277-6448296 | Msa0052260:CDS | 45.0% | |
| TGTGCAGACACTGAATTCTG+AGG | + | chr1_2:6448385-6448404 | Msa0052260:CDS | 45.0% | |
| AGAAAAGCCTCTATGGTGCT+TGG | + | chr1_2:6449029-6449048 | Msa0052260:intron | 45.0% | |
| GAAAAGCCTCTATGGTGCTT+GGG | + | chr1_2:6449030-6449049 | Msa0052260:intron | 45.0% | |
| CTACATGAAGCCAAATGCCA+TGG | - | chr1_2:6449282-6449301 | None:intergenic | 45.0% | |
| !!! | GCGGTTTTGTTCTCTGATAG+AGG | + | chr1_2:6449361-6449380 | Msa0052260:intron | 45.0% |
| AGATTGGGCTATTCTGGATC+GGG | + | chr1_2:6449574-6449593 | Msa0052260:CDS | 45.0% | |
| ! | ACCCTACGTCTTCCTGTTTT+TGG | + | chr1_2:6449644-6449663 | Msa0052260:CDS | 45.0% |
| CACCAAAAACAGGAAGACGT+AGG | - | chr1_2:6449649-6449668 | None:intergenic | 45.0% | |
| !!! | CTACGTCTTCCTGTTTTTGG+TGG | + | chr1_2:6449647-6449666 | Msa0052260:CDS | 45.0% |
| GGAGGCTATTTGTTCAGCAA+TGG | + | chr1_2:6449833-6449852 | Msa0052260:CDS | 45.0% | |
| TTCAGCAATGGATGTGATGC+AGG | + | chr1_2:6449845-6449864 | Msa0052260:CDS | 45.0% | |
| CTTCGGTAACAGTAGGCATA+TGG | - | chr1_2:6449883-6449902 | None:intergenic | 45.0% | |
| CATATGCCTACTGTTACCGA+AGG | + | chr1_2:6449881-6449900 | Msa0052260:CDS | 45.0% | |
| CCCAGGCTAGATTATGATTG+TGG | + | chr1_2:6450019-6450038 | Msa0052260:intron | 45.0% | |
| AGCTTCTCATCGCTGTAGTT+TGG | + | chr1_2:6450464-6450483 | Msa0052260:intron | 45.0% | |
| GCTTCTCATCGCTGTAGTTT+GGG | + | chr1_2:6450465-6450484 | Msa0052260:intron | 45.0% | |
| ! | TGTCTGACCTGTCCTTTTTG+GGG | + | chr1_2:6451017-6451036 | Msa0052260:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTTATGAT+TGG | + | chr1_2:6450574-6450593 | Msa0052260:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTATGATT+GGG | + | chr1_2:6450575-6450594 | Msa0052260:intron | 5.0% |
| ACGCAGCGTGATTGTGATTG+TGG | - | chr1_2:6446762-6446781 | None:intergenic | 50.0% | |
| ! | CTTCGTGTTTTTCGTCGTCG+TGG | - | chr1_2:6447064-6447083 | None:intergenic | 50.0% |
| !! | AGAGAGCATCAACACCAACG+AGG | + | chr1_2:6447082-6447101 | Msa0052260:CDS | 50.0% |
| !! | GGCGAGTTAGTTCTTTTCGG+CGG | - | chr1_2:6447225-6447244 | None:intergenic | 50.0% |
| GAGACAGAAATTGACGACGC+CGG | + | chr1_2:6447272-6447291 | Msa0052260:CDS | 50.0% | |
| GACTGAGATCGTTTCACCGA+CGG | - | chr1_2:6447309-6447328 | None:intergenic | 50.0% | |
| GGTGAAACGATCTCAGTCGA+CGG | + | chr1_2:6447311-6447330 | Msa0052260:CDS | 50.0% | |
| ! | GGGAGAATCGTTTTCGATGC+CGG | + | chr1_2:6447437-6447456 | Msa0052260:CDS | 50.0% |
| ! | TGAGGAAAAGTACACCGGAG+AGG | + | chr1_2:6447499-6447518 | Msa0052260:CDS | 50.0% |
| GATCCTCGAGTTTCTCACGA+TGG | + | chr1_2:6447756-6447775 | Msa0052260:CDS | 50.0% | |
| ! | TCTGGAGTACAGGAGTTTGG+AGG | + | chr1_2:6447882-6447901 | Msa0052260:CDS | 50.0% |
| ! | AGCTCGAGCGATTGTTGTTC+CGG | + | chr1_2:6447923-6447942 | Msa0052260:CDS | 50.0% |
| AATCCGTCTTCGAGAAACGG+TGG | + | chr1_2:6447969-6447988 | Msa0052260:CDS | 50.0% | |
| GGACGAACTGCAGAACGAAT+TGG | - | chr1_2:6448107-6448126 | None:intergenic | 50.0% | |
| CCTAGCTTACTTGGAGAAGC+AGG | - | chr1_2:6448128-6448147 | None:intergenic | 50.0% | |
| CCTGCTTCTCCAAGTAAGCT+AGG | + | chr1_2:6448125-6448144 | Msa0052260:CDS | 50.0% | |
| GATGGCATCCCTAGCTTACT+TGG | - | chr1_2:6448137-6448156 | None:intergenic | 50.0% | |
| AGTCCTTGCCGTGGAAGAAA+CGG | + | chr1_2:6448182-6448201 | Msa0052260:CDS | 50.0% | |
| TTGCCGTTGATGTTCCAAGG+GGG | + | chr1_2:6448258-6448277 | Msa0052260:CDS | 50.0% | |
| GGGGGAAAATTGGAGAGAAC+AGG | + | chr1_2:6448276-6448295 | Msa0052260:CDS | 50.0% | |
| TAGCTACCCAAGCACCATAG+AGG | - | chr1_2:6449039-6449058 | None:intergenic | 50.0% | |
| ATTCTGGATCGGGTGTACTC+TGG | + | chr1_2:6449584-6449603 | Msa0052260:CDS | 50.0% | |
| !!! | TCCTGTTTTTGGTGGTGCCA+AGG | + | chr1_2:6449655-6449674 | Msa0052260:CDS | 50.0% |
| ACCTTGGCACCACCAAAAAC+AGG | - | chr1_2:6449659-6449678 | None:intergenic | 50.0% | |
| AATGGATGTGATGCAGGCCA+TGG | + | chr1_2:6449851-6449870 | Msa0052260:CDS | 50.0% | |
| TAGGCATATGGAGGATGCCA+TGG | - | chr1_2:6449871-6449890 | None:intergenic | 50.0% | |
| CGGTAACAGTAGGCATATGG+AGG | - | chr1_2:6449880-6449899 | None:intergenic | 50.0% | |
| GTTAGCACCCCAAAAAGGAC+AGG | - | chr1_2:6451027-6451046 | None:intergenic | 50.0% | |
| AACGATCTCAGTCGACGGAG+CGG | + | chr1_2:6447316-6447335 | Msa0052260:CDS | 55.0% | |
| ! | CAAGGTACTCCTCGGCCTAA+TGG | + | chr1_2:6447351-6447370 | Msa0052260:CDS | 55.0% |
| TCGGCCTAATGGTGAGACTC+CGG | + | chr1_2:6447362-6447381 | Msa0052260:CDS | 55.0% | |
| GCAACCGGAGTCTCACCATT+AGG | - | chr1_2:6447369-6447388 | None:intergenic | 55.0% | |
| GGCGGTTTCGCTTTACTCAC+CGG | - | chr1_2:6447459-6447478 | None:intergenic | 55.0% | |
| ! | GGAAAAGTACACCGGAGAGG+AGG | + | chr1_2:6447502-6447521 | Msa0052260:CDS | 55.0% |
| AAGTACACCGGAGAGGAGGA+AGG | + | chr1_2:6447506-6447525 | Msa0052260:CDS | 55.0% | |
| CTAGGTCAGTGGATCAGCAC+CGG | + | chr1_2:6447607-6447626 | Msa0052260:CDS | 55.0% | |
| GCACCATCGTGAGAAACTCG+AGG | - | chr1_2:6447762-6447781 | None:intergenic | 55.0% | |
| GGAGTACAGGAGTTTGGAGG+TGG | + | chr1_2:6447885-6447904 | Msa0052260:CDS | 55.0% | |
| ATCGCTCGAGCTGATCGTTG+CGG | - | chr1_2:6447915-6447934 | None:intergenic | 55.0% | |
| ! | GAGCGATTGTTGTTCCGGCA+AGG | + | chr1_2:6447928-6447947 | Msa0052260:CDS | 55.0% |
| TCCGGCAAGGTTCTTGCAAG+AGG | + | chr1_2:6447941-6447960 | Msa0052260:CDS | 55.0% | |
| GCCTCTTGCAAGAACCTTGC+CGG | - | chr1_2:6447945-6447964 | None:intergenic | 55.0% | |
| TTCGGCACCAAAAGCTTCGG+AGG | - | chr1_2:6448017-6448036 | None:intergenic | 55.0% | |
| ATTCCTCGTGGAGACGATGC+AGG | - | chr1_2:6448059-6448078 | None:intergenic | 55.0% | |
| ACACCGTTTCTTCCACGGCA+AGG | - | chr1_2:6448188-6448207 | None:intergenic | 55.0% | |
| ! | GTGTACTCTGGTTCCCTCTC+AGG | + | chr1_2:6449596-6449615 | Msa0052260:CDS | 55.0% |
| AACAGGAAGACGTAGGGTGC+TGG | - | chr1_2:6449642-6449661 | None:intergenic | 55.0% | |
| GGTAACAACGGTGGCCTCGT+TGG | - | chr1_2:6447099-6447118 | None:intergenic | 60.0% | |
| ACCGACGGCGTAACTGTCAC+CGG | - | chr1_2:6447294-6447313 | None:intergenic | 60.0% | |
| ! | GGCAACGGCAAGGTACTCCT+CGG | + | chr1_2:6447343-6447362 | Msa0052260:CDS | 60.0% |
| GGAGTCTCACCATTAGGCCG+AGG | - | chr1_2:6447363-6447382 | None:intergenic | 60.0% | |
| AAACTCTGCACCGTCGCTGG+CGG | - | chr1_2:6447480-6447499 | None:intergenic | 60.0% | |
| CTCAAACTCTGCACCGTCGC+TGG | - | chr1_2:6447483-6447502 | None:intergenic | 60.0% | |
| CAGCGACGGTGCAGAGTTTG+AGG | + | chr1_2:6447481-6447500 | Msa0052260:CDS | 60.0% | |
| ACCGGAGAGGAGGAAGGTTC+CGG | + | chr1_2:6447512-6447531 | Msa0052260:CDS | 60.0% | |
| !! | GTCGGTGTTGTAACCGTCGC+CGG | - | chr1_2:6447534-6447553 | None:intergenic | 60.0% |
| GTTGTGATTTCGCCGGCCAC+CGG | - | chr1_2:6447629-6447648 | None:intergenic | 60.0% | |
| AGTCCTGCATCGTCTCCACG+AGG | + | chr1_2:6448053-6448072 | Msa0052260:CDS | 60.0% | |
| AGCTAGGGATGCCATCACCG+AGG | + | chr1_2:6448141-6448160 | Msa0052260:CDS | 60.0% | |
| AAGGACTCACACCGCGCGAA+GGG | - | chr1_2:6448169-6448188 | None:intergenic | 60.0% | |
| ! | AGGAGCGACCGAAGCGCTAA+AGG | + | chr1_2:6449616-6449635 | Msa0052260:CDS | 60.0% |
| !! | GGTGCTGGCCTTTAGCGCTT+CGG | - | chr1_2:6449627-6449646 | None:intergenic | 60.0% |
| GCCGGTGACAGTTACGCCGT+CGG | + | chr1_2:6447290-6447309 | Msa0052260:CDS | 65.0% | |
| GCCGGAACCTTCCTCCTCTC+CGG | - | chr1_2:6447516-6447535 | None:intergenic | 65.0% | |
| GAGGAGGAAGGTTCCGGCGA+CGG | + | chr1_2:6447518-6447537 | Msa0052260:CDS | 65.0% | |
| ! | GGTCAGTGGATCAGCACCGG+TGG | + | chr1_2:6447610-6447629 | Msa0052260:CDS | 65.0% |
| !! | AGTGGATCAGCACCGGTGGC+CGG | + | chr1_2:6447614-6447633 | Msa0052260:CDS | 65.0% |
| AGGACTCACACCGCGCGAAG+GGG | - | chr1_2:6448168-6448187 | None:intergenic | 65.0% | |
| CAAGGACTCACACCGCGCGA+AGG | - | chr1_2:6448170-6448189 | None:intergenic | 65.0% | |
| CGCTTCGGTCGCTCCTGAGA+GGG | - | chr1_2:6449612-6449631 | None:intergenic | 65.0% | |
| CTCAGTCGACGGAGCGGCAG+AGG | + | chr1_2:6447322-6447341 | Msa0052260:CDS | 70.0% | |
| CGACGGAGCGGCAGAGGCAA+CGG | + | chr1_2:6447328-6447347 | Msa0052260:CDS | 70.0% | |
| GAGCGGCAGAGGCAACGGCA+AGG | + | chr1_2:6447333-6447352 | Msa0052260:CDS | 70.0% | |
| AGCGAAACCGCCGCCAGCGA+CGG | + | chr1_2:6447467-6447486 | Msa0052260:CDS | 70.0% | |
| CGCGAAGGGGACCTCGGTGA+TGG | - | chr1_2:6448155-6448174 | None:intergenic | 70.0% | |
| TCACCGAGGTCCCCTTCGCG+CGG | + | chr1_2:6448155-6448174 | Msa0052260:CDS | 70.0% | |
| ACACCGCGCGAAGGGGACCT+CGG | - | chr1_2:6448161-6448180 | None:intergenic | 70.0% | |
| CGCGGTGTGAGTCCTTGCCG+TGG | + | chr1_2:6448173-6448192 | Msa0052260:CDS | 70.0% | |
| GCGCTTCGGTCGCTCCTGAG+AGG | - | chr1_2:6449613-6449632 | None:intergenic | 70.0% | |
| CTCTGCACCGTCGCTGGCGG+CGG | - | chr1_2:6447477-6447496 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6446694 | 6451421 | 6446694 | ID=Msa0052260;Name=Msa0052260 |
| chr1_2 | mRNA | 6446694 | 6451421 | 6446694 | ID=Msa0052260-mRNA-1;Parent=Msa0052260;Name=Msa0052260-mRNA-1;_AED=0.02;_eAED=0.02;_QI=345|1|1|1|1|1|6|428|622 |
| chr1_2 | exon | 6446694 | 6448406 | 6446694 | ID=Msa0052260-mRNA-1:exon:2072;Parent=Msa0052260-mRNA-1 |
| chr1_2 | exon | 6449031 | 6449150 | 6449031 | ID=Msa0052260-mRNA-1:exon:2073;Parent=Msa0052260-mRNA-1 |
| chr1_2 | exon | 6449560 | 6449676 | 6449560 | ID=Msa0052260-mRNA-1:exon:2074;Parent=Msa0052260-mRNA-1 |
| chr1_2 | exon | 6449813 | 6449902 | 6449813 | ID=Msa0052260-mRNA-1:exon:2075;Parent=Msa0052260-mRNA-1 |
| chr1_2 | exon | 6450690 | 6450797 | 6450690 | ID=Msa0052260-mRNA-1:exon:2076;Parent=Msa0052260-mRNA-1 |
| chr1_2 | exon | 6450928 | 6451421 | 6450928 | ID=Msa0052260-mRNA-1:exon:2077;Parent=Msa0052260-mRNA-1 |
| chr1_2 | five_prime_UTR | 6446694 | 6447038 | 6446694 | ID=Msa0052260-mRNA-1:five_prime_utr;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6447039 | 6448406 | 6447039 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6449031 | 6449150 | 6449031 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6449560 | 6449676 | 6449560 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6449813 | 6449902 | 6449813 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6450690 | 6450797 | 6450690 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | CDS | 6450928 | 6450993 | 6450928 | ID=Msa0052260-mRNA-1:cds;Parent=Msa0052260-mRNA-1 |
| chr1_2 | three_prime_UTR | 6450994 | 6451421 | 6450994 | ID=Msa0052260-mRNA-1:three_prime_utr;Parent=Msa0052260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
