Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548490 | XP_003606644.3 | 96.000 | 150 | 4 | 1 | 10 | 159 | 1 | 148 | 2.24e-93 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548490 | sp|Q2HU68|H2A1_MEDTR | 88.667 | 150 | 15 | 1 | 10 | 159 | 1 | 148 | 4.01e-83 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548490 | A0A396I5J8 | 96.000 | 150 | 4 | 1 | 10 | 159 | 1 | 148 | 1.07e-93 | 277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0548490 | Msa0644440 | 0.825679 | 4.110910e-54 | -8.615850e-47 |
| Msa0548490 | Msa1339230 | 0.811944 | 5.433035e-51 | -8.615850e-47 |
| Msa0548490 | Msa1410190 | 0.808177 | 3.520171e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548490 | MtrunA17_Chr4g0031001 | 96.000 | 150 | 4 | 1 | 10 | 159 | 1 | 148 | 2.06e-97 | 277 |
| Msa0548490 | MtrunA17_Chr4g0031651 | 95.333 | 150 | 5 | 1 | 10 | 159 | 1 | 148 | 1.50e-96 | 275 |
| Msa0548490 | MtrunA17_Chr2g0327951 | 88.742 | 151 | 15 | 1 | 9 | 159 | 37 | 185 | 1.31e-85 | 249 |
| Msa0548490 | MtrunA17_Chr4g0032301 | 96.000 | 150 | 4 | 1 | 10 | 159 | 1 | 148 | 9.98e-84 | 243 |
| Msa0548490 | MtrunA17_Chr4g0035621 | 93.421 | 152 | 8 | 1 | 10 | 159 | 1 | 152 | 2.18e-82 | 239 |
| Msa0548490 | MtrunA17_Chr4g0031041 | 93.939 | 132 | 7 | 1 | 29 | 159 | 14 | 145 | 7.91e-82 | 238 |
| Msa0548490 | MtrunA17_Chr2g0327931 | 88.312 | 154 | 13 | 2 | 10 | 159 | 1 | 153 | 4.01e-78 | 228 |
| Msa0548490 | MtrunA17_Chr8g0379311 | 96.970 | 132 | 4 | 0 | 10 | 141 | 1 | 132 | 2.78e-75 | 221 |
| Msa0548490 | MtrunA17_Chr7g0272611 | 79.699 | 133 | 26 | 1 | 19 | 151 | 13 | 144 | 9.22e-71 | 209 |
| Msa0548490 | MtrunA17_Chr7g0273331 | 70.896 | 134 | 36 | 2 | 6 | 138 | 49 | 180 | 5.78e-60 | 184 |
| Msa0548490 | MtrunA17_Chr7g0268831 | 75.591 | 127 | 25 | 3 | 13 | 138 | 6 | 127 | 7.49e-60 | 182 |
| Msa0548490 | MtrunA17_Chr7g0273351 | 74.803 | 127 | 28 | 1 | 12 | 138 | 2 | 124 | 7.68e-60 | 182 |
| Msa0548490 | MtrunA17_Chr7g0259151 | 73.016 | 126 | 31 | 1 | 13 | 138 | 5 | 127 | 3.79e-59 | 180 |
| Msa0548490 | MtrunA17_Chr2g0319191 | 74.790 | 119 | 30 | 0 | 20 | 138 | 3 | 121 | 1.55e-58 | 178 |
| Msa0548490 | MtrunA17_Chr2g0319181 | 73.950 | 119 | 31 | 0 | 20 | 138 | 3 | 121 | 1.56e-57 | 176 |
| Msa0548490 | MtrunA17_Chr6g0449661 | 64.567 | 127 | 31 | 3 | 33 | 158 | 85 | 198 | 1.06e-47 | 153 |
| Msa0548490 | MtrunA17_Chr3g0119971 | 64.286 | 126 | 31 | 3 | 34 | 158 | 81 | 193 | 2.57e-47 | 152 |
| Msa0548490 | MtrunA17_Chr4g0031031 | 75.238 | 105 | 21 | 1 | 54 | 158 | 10 | 109 | 3.34e-45 | 144 |
| Msa0548490 | MtrunA17_Chr7g0273341 | 70.909 | 110 | 21 | 2 | 32 | 141 | 57 | 155 | 5.95e-45 | 145 |
| Msa0548490 | MtrunA17_Chr1g0148961 | 59.292 | 113 | 44 | 2 | 30 | 141 | 23 | 134 | 7.29e-36 | 121 |
| Msa0548490 | MtrunA17_Chr1g0148951 | 59.292 | 113 | 44 | 2 | 30 | 141 | 23 | 134 | 7.29e-36 | 121 |
| Msa0548490 | MtrunA17_Chr1g0211651 | 59.633 | 109 | 42 | 2 | 30 | 137 | 20 | 127 | 6.56e-35 | 118 |
| Msa0548490 | MtrunA17_Chr1g0184901 | 60.952 | 105 | 39 | 2 | 34 | 137 | 27 | 130 | 3.70e-34 | 116 |
| Msa0548490 | MtrunA17_Chr1g0183701 | 57.534 | 73 | 31 | 0 | 76 | 148 | 30 | 102 | 3.16e-24 | 90.5 |
| Msa0548490 | MtrunA17_Chr4g0024701 | 49.524 | 105 | 33 | 2 | 33 | 137 | 26 | 110 | 6.15e-22 | 85.1 |
| Msa0548490 | MtrunA17_Chr4g0000531 | 71.111 | 45 | 13 | 0 | 94 | 138 | 5 | 49 | 1.19e-15 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548490 | AT5G02560.1 | 81.699 | 153 | 25 | 1 | 10 | 159 | 1 | 153 | 1.68e-78 | 230 |
| Msa0548490 | AT5G02560.2 | 70.621 | 177 | 25 | 2 | 10 | 159 | 1 | 177 | 1.37e-73 | 218 |
| Msa0548490 | AT5G27670.1 | 75.658 | 152 | 33 | 3 | 10 | 159 | 1 | 150 | 1.80e-73 | 217 |
| Msa0548490 | AT5G59870.1 | 75.000 | 148 | 36 | 1 | 13 | 159 | 3 | 150 | 1.98e-71 | 212 |
| Msa0548490 | AT1G51060.1 | 71.318 | 129 | 37 | 0 | 20 | 148 | 3 | 131 | 1.18e-60 | 184 |
| Msa0548490 | AT4G27230.2 | 70.543 | 129 | 38 | 0 | 20 | 148 | 3 | 131 | 5.35e-60 | 182 |
| Msa0548490 | AT4G27230.1 | 70.543 | 129 | 38 | 0 | 20 | 148 | 3 | 131 | 5.35e-60 | 182 |
| Msa0548490 | AT3G20670.1 | 71.318 | 129 | 37 | 0 | 20 | 148 | 3 | 131 | 1.28e-59 | 181 |
| Msa0548490 | AT1G08880.1 | 72.222 | 126 | 32 | 1 | 16 | 138 | 2 | 127 | 3.39e-58 | 178 |
| Msa0548490 | AT5G54640.1 | 72.000 | 125 | 35 | 0 | 20 | 144 | 3 | 127 | 3.62e-58 | 177 |
| Msa0548490 | AT1G54690.1 | 73.438 | 128 | 28 | 3 | 12 | 138 | 5 | 127 | 1.35e-57 | 176 |
| Msa0548490 | AT2G38810.1 | 60.550 | 109 | 41 | 2 | 30 | 137 | 25 | 132 | 6.12e-36 | 121 |
| Msa0548490 | AT2G38810.4 | 60.550 | 109 | 41 | 2 | 30 | 137 | 25 | 132 | 6.12e-36 | 121 |
| Msa0548490 | AT2G38810.3 | 60.550 | 109 | 41 | 2 | 30 | 137 | 25 | 132 | 6.12e-36 | 121 |
| Msa0548490 | AT2G38810.2 | 60.550 | 109 | 41 | 2 | 30 | 137 | 25 | 132 | 6.12e-36 | 121 |
| Msa0548490 | AT1G52740.1 | 61.905 | 105 | 38 | 2 | 34 | 137 | 27 | 130 | 1.67e-34 | 118 |
| Msa0548490 | AT3G54560.1 | 57.798 | 109 | 44 | 2 | 34 | 141 | 29 | 136 | 8.37e-34 | 116 |
| Msa0548490 | AT3G54560.2 | 57.798 | 109 | 44 | 2 | 34 | 141 | 29 | 136 | 8.37e-34 | 116 |
| Msa0548490 | AT4G13570.1 | 47.826 | 92 | 46 | 2 | 41 | 131 | 28 | 118 | 6.06e-20 | 80.5 |
| Msa0548490 | AT4G13570.2 | 47.253 | 91 | 46 | 2 | 42 | 131 | 35 | 124 | 1.95e-19 | 79.3 |
Find 47 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGACTTTCCAGCCTTCTT+TGG | 0.239817 | 4_1:-42569002 | None:intergenic |
| GATCAGATCTAAGCCTTCTT+TGG | 0.251178 | 4_1:-42569023 | None:intergenic |
| GAGCTTGGTAAATTACTTTC+TGG | 0.258692 | 4_1:+42568888 | Msa0548490:CDS |
| CTCGAAATCTCAGTTTGAAA+TGG | 0.331823 | 4_1:+42568566 | Msa0548490:intron |
| CTTGTCACCGACTTCTTCCT+TGG | 0.333455 | 4_1:-42568642 | None:intergenic |
| TTCTTTGGCTCTTTGTTAGC+AGG | 0.375405 | 4_1:-42568987 | None:intergenic |
| CGATTCTTCCAACTGGGAAC+TGG | 0.386467 | 4_1:-42568683 | None:intergenic |
| AGAACTGCTGCTAAGTATAC+TGG | 0.391141 | 4_1:-42568756 | None:intergenic |
| TACGCTCAGCGTGTCGGAAC+CGG | 0.407815 | 4_1:+42568729 | Msa0548490:CDS |
| TTTCATTCTTCTTAGGCAAA+AGG | 0.417964 | 4_1:-42568956 | None:intergenic |
| TATCGACCGATTCTTCCAAC+TGG | 0.433444 | 4_1:-42568690 | None:intergenic |
| GGCATGTGTTGTTGGCTGTT+AGG | 0.442957 | 4_1:+42568856 | Msa0548490:CDS |
| AAAAGGATAGGGTTAATGTT+TGG | 0.446113 | 4_1:-42568939 | None:intergenic |
| TCCTCCTCCTTTCCTTCCAC+CGG | 0.452471 | 4_1:-42568619 | None:intergenic |
| AACAAAGAGCCAAAGAAGGC+TGG | 0.466354 | 4_1:+42568993 | Msa0548490:CDS |
| CATCCCAAGGCATGTGTTGT+TGG | 0.466727 | 4_1:+42568848 | Msa0548490:CDS |
| TGCTGCTGAGGTTCTCGAGT+TGG | 0.468175 | 4_1:+42568788 | Msa0548490:CDS |
| AAGGGAGCCGGTGGAAGGAA+AGG | 0.471425 | 4_1:+42568612 | Msa0548490:CDS |
| CAGTTCCCAGTTGGAAGAAT+CGG | 0.471827 | 4_1:+42568684 | Msa0548490:CDS |
| ACAGCCAACAACACATGCCT+TGG | 0.483615 | 4_1:-42568852 | None:intergenic |
| TTCTTCTTAGGCAAAAGGAT+AGG | 0.488209 | 4_1:-42568951 | None:intergenic |
| TCTTCTTAGGCAAAAGGATA+GGG | 0.492139 | 4_1:-42568950 | None:intergenic |
| GCTGAGGTTCTCGAGTTGGC+TGG | 0.495812 | 4_1:+42568792 | Msa0548490:CDS |
| TCTTGAATATCTTGCTGCTG+AGG | 0.496391 | 4_1:+42568776 | Msa0548490:CDS |
| AAGCACGAAGACAACAAAGA+AGG | 0.514513 | 4_1:+42568593 | Msa0548490:CDS |
| TCTGGTGTCACGATTGCTCA+TGG | 0.516340 | 4_1:+42568906 | Msa0548490:CDS |
| GCCGGTGGAAGGAAAGGAGG+AGG | 0.517219 | 4_1:+42568618 | Msa0548490:CDS |
| ATCGGTCGATACTTGAAGAA+AGG | 0.519021 | 4_1:+42568702 | Msa0548490:CDS |
| AGCACGAAGACAACAAAGAA+GGG | 0.520726 | 4_1:+42568594 | Msa0548490:CDS |
| GGCTGGAAAGTCTCCAAAGA+AGG | 0.525629 | 4_1:+42569010 | Msa0548490:CDS |
| CAGCCAACAACACATGCCTT+GGG | 0.536965 | 4_1:-42568851 | None:intergenic |
| CAAAGAAGGGAGCCGGTGGA+AGG | 0.542230 | 4_1:+42568607 | Msa0548490:CDS |
| TGCTAACAAAGAGCCAAAGA+AGG | 0.544648 | 4_1:+42568989 | Msa0548490:CDS |
| GGAGCCGGTGGAAGGAAAGG+AGG | 0.549135 | 4_1:+42568615 | Msa0548490:CDS |
| GTTAGGAACGATGAAGAGCT+TGG | 0.552797 | 4_1:+42568873 | Msa0548490:CDS |
| GAAGGAAAGGAGGAGGACCA+AGG | 0.555100 | 4_1:+42568625 | Msa0548490:CDS |
| GGAAGATACGCTCAGCGTGT+CGG | 0.558472 | 4_1:+42568723 | Msa0548490:CDS |
| TCCAACTGGGAACTGGAGAC+CGG | 0.563080 | 4_1:-42568676 | None:intergenic |
| GCCGGTCTCCAGTTCCCAGT+TGG | 0.570367 | 4_1:+42568675 | Msa0548490:CDS |
| TGCTAAGTATACTGGAGCAC+CGG | 0.581285 | 4_1:-42568748 | None:intergenic |
| ACAACAAAGAAGGGAGCCGG+TGG | 0.595449 | 4_1:+42568603 | Msa0548490:CDS |
| AAGACAACAAAGAAGGGAGC+CGG | 0.597879 | 4_1:+42568600 | Msa0548490:CDS |
| GTGACAAGATCAATCAGAGC+CGG | 0.601599 | 4_1:+42568657 | Msa0548490:CDS |
| AGGAGGACCAAGGAAGAAGT+CGG | 0.610829 | 4_1:+42568635 | Msa0548490:CDS |
| ATCGACCGATTCTTCCAACT+GGG | 0.643258 | 4_1:-42568689 | None:intergenic |
| AGAAGAATAGAATCATCCCA+AGG | 0.679264 | 4_1:+42568835 | Msa0548490:CDS |
| GGTGTCACGATTGCTCATGG+TGG | 0.707991 | 4_1:+42568909 | Msa0548490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAA+GGG | - | chr4_1:42564458-42564477 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAA+AGG | - | chr4_1:42564459-42564478 | None:intergenic | 0.0% |
| !! | AAATAAAAATAAAAAAAAAT+TGG | + | chr4_1:42564870-42564889 | Msa0548490:intron | 0.0% |
| !!! | GATAAAATATTTTAAATGAA+TGG | + | chr4_1:42564395-42564414 | Msa0548490:intron | 10.0% |
| !!! | ATTATAGTATTTTTTTTTAG+AGG | + | chr4_1:42566850-42566869 | Msa0548490:intron | 10.0% |
| !! | TATTTAATACTTAATGTATT+TGG | - | chr4_1:42568051-42568070 | None:intergenic | 10.0% |
| !!! | ATTCTAATTCTAAAAATACT+AGG | - | chr4_1:42562470-42562489 | None:intergenic | 15.0% |
| !! | TGAAACTGAAAATATTTATT+GGG | - | chr4_1:42563441-42563460 | None:intergenic | 15.0% |
| !! | ATGAAACTGAAAATATTTAT+TGG | - | chr4_1:42563442-42563461 | None:intergenic | 15.0% |
| !! | AAAAATATGACAAAAACAAT+AGG | + | chr4_1:42564702-42564721 | Msa0548490:intron | 15.0% |
| !! | AAGATATATGATATCAAATT+TGG | + | chr4_1:42564830-42564849 | Msa0548490:intron | 15.0% |
| !! | AGATATATGATATCAAATTT+GGG | + | chr4_1:42564831-42564850 | Msa0548490:intron | 15.0% |
| !!! | ACAAAAAAAATCATGAATTT+TGG | - | chr4_1:42565848-42565867 | None:intergenic | 15.0% |
| !! | ATGGTTTAAATGATTATTAT+TGG | - | chr4_1:42566046-42566065 | None:intergenic | 15.0% |
| !! | TAAGAATATGAAATAAAAAG+TGG | + | chr4_1:42566258-42566277 | Msa0548490:intron | 15.0% |
| !! | TAATGAATCAAAATAAATAG+AGG | + | chr4_1:42567025-42567044 | Msa0548490:intron | 15.0% |
| !! | AATGAATCAAAATAAATAGA+GGG | + | chr4_1:42567026-42567045 | Msa0548490:intron | 15.0% |
| !! | AAGTTAGTAGTATTAATTAA+AGG | + | chr4_1:42567852-42567871 | Msa0548490:intron | 15.0% |
| !! | CTAAAATGGAAAATAAAAAA+GGG | + | chr4_1:42568128-42568147 | Msa0548490:intron | 15.0% |
| !! | TAAAATGGAAAATAAAAAAG+GGG | + | chr4_1:42568129-42568148 | Msa0548490:intron | 15.0% |
| !! | ATTATAGATTCTGCAAAAAA+TGG | + | chr4_1:42562275-42562294 | Msa0548490:intron | 20.0% |
| !! | AAAAACAGACATTCAAAAAT+AGG | - | chr4_1:42562819-42562838 | None:intergenic | 20.0% |
| !! | AAACTGAAAATATTTATTGG+GGG | - | chr4_1:42563439-42563458 | None:intergenic | 20.0% |
| !! | GAAACTGAAAATATTTATTG+GGG | - | chr4_1:42563440-42563459 | None:intergenic | 20.0% |
| !!! | CAATTTTGTTTACTTCTTTA+TGG | + | chr4_1:42563611-42563630 | Msa0548490:intron | 20.0% |
| !! | GATATAAACAAAACAATGAT+TGG | + | chr4_1:42563666-42563685 | Msa0548490:intron | 20.0% |
| !! | ACATCAATATAAACTTGATT+TGG | + | chr4_1:42563877-42563896 | Msa0548490:intron | 20.0% |
| !! | TAAAAAAATCTCACTCAAAA+GGG | + | chr4_1:42564429-42564448 | Msa0548490:intron | 20.0% |
| !! | AAAAAAATAAAAACACACGA+CGG | - | chr4_1:42564605-42564624 | None:intergenic | 20.0% |
| !! | AGAAATATGACAAAAACAAT+AGG | + | chr4_1:42564656-42564675 | Msa0548490:intron | 20.0% |
| !!! | TGTCATATTTTTTTTTGTCT+TGG | - | chr4_1:42564694-42564713 | None:intergenic | 20.0% |
| !! | GATATCATATATCTTCAATT+TGG | - | chr4_1:42564825-42564844 | None:intergenic | 20.0% |
| !! | AATTGATTGAATTATGTGTT+GGG | - | chr4_1:42564942-42564961 | None:intergenic | 20.0% |
| !! | AAATTGATTGAATTATGTGT+TGG | - | chr4_1:42564943-42564962 | None:intergenic | 20.0% |
| !! | AATATGAAATAAAAAGTGGT+GGG | + | chr4_1:42566262-42566281 | Msa0548490:intron | 20.0% |
| !!! | TACTTTTCTTTGTAAAAATG+TGG | - | chr4_1:42566355-42566374 | None:intergenic | 20.0% |
| !!! | TTACAAAGAAAAGTATGTAT+TGG | + | chr4_1:42566360-42566379 | Msa0548490:intron | 20.0% |
| !! | TCACAAAAGTTGTTATAAAA+TGG | + | chr4_1:42566447-42566466 | Msa0548490:intron | 20.0% |
| !!! | TTTTCATTGGTTAAAAACAA+TGG | + | chr4_1:42566585-42566604 | Msa0548490:intron | 20.0% |
| !! | TCCTGAATAAATATCTAAAT+CGG | + | chr4_1:42566908-42566927 | Msa0548490:intron | 20.0% |
| !! | AATTTGTGTATTATTTGTCA+TGG | - | chr4_1:42566965-42566984 | None:intergenic | 20.0% |
| !! | GCTAAAATGGAAAATAAAAA+AGG | + | chr4_1:42568127-42568146 | Msa0548490:intron | 20.0% |
| ! | TTGTCATTATGATACACAAA+AGG | - | chr4_1:42562020-42562039 | None:intergenic | 25.0% |
| ! | TAATGAAGAATTCTTTGATC+TGG | + | chr4_1:42562306-42562325 | Msa0548490:intron | 25.0% |
| ! | AATGAAGAATTCTTTGATCT+GGG | + | chr4_1:42562307-42562326 | Msa0548490:intron | 25.0% |
| !! | ACACAAACAGATAGAAATTT+TGG | - | chr4_1:42562445-42562464 | None:intergenic | 25.0% |
| ! | AGAATTAGAATCGTAAGTAT+AGG | + | chr4_1:42562479-42562498 | Msa0548490:intron | 25.0% |
| !! | AACATTTCAATACTACGTTT+TGG | + | chr4_1:42562670-42562689 | Msa0548490:intron | 25.0% |
| !!! | CAAAAACATATGCTTTGAAA+GGG | - | chr4_1:42562707-42562726 | None:intergenic | 25.0% |
| !!! | TCTTTTTTAAGATTATGTGC+AGG | - | chr4_1:42562730-42562749 | None:intergenic | 25.0% |
| !! | AACACAATCTAAATTAGCTT+TGG | - | chr4_1:42562760-42562779 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTTCCAAGAGTT+TGG | + | chr4_1:42562832-42562851 | Msa0548490:intron | 25.0% |
| ! | TACATAATGGCAAATTAGTT+GGG | + | chr4_1:42562855-42562874 | Msa0548490:intron | 25.0% |
| !! | AATCATTTAAGTTCTTTCTC+AGG | + | chr4_1:42562909-42562928 | Msa0548490:intron | 25.0% |
| ! | ATTTGTGTAAATACTTGCAT+TGG | - | chr4_1:42563372-42563391 | None:intergenic | 25.0% |
| ! | TTGATCAACATTTATACGAA+GGG | - | chr4_1:42563528-42563547 | None:intergenic | 25.0% |
| ! | ATTGATCAACATTTATACGA+AGG | - | chr4_1:42563529-42563548 | None:intergenic | 25.0% |
| ! | TCTTTATGGAAATCGTATTT+AGG | + | chr4_1:42563625-42563644 | Msa0548490:intron | 25.0% |
| ! | CTTTATGGAAATCGTATTTA+GGG | + | chr4_1:42563626-42563645 | Msa0548490:intron | 25.0% |
| ! | TTTATGGAAATCGTATTTAG+GGG | + | chr4_1:42563627-42563646 | Msa0548490:intron | 25.0% |
| !! | TTACAGTTAGTTAGAGTATT+TGG | + | chr4_1:42564097-42564116 | Msa0548490:intron | 25.0% |
| ! | GTAAAAAAATCTCACTCAAA+AGG | + | chr4_1:42564428-42564447 | Msa0548490:intron | 25.0% |
| ! | AATAAAACACTATAGTCTAG+TGG | + | chr4_1:42564542-42564561 | Msa0548490:intron | 25.0% |
| ! | TATGATTACTTATGATGCAT+TGG | - | chr4_1:42564799-42564818 | None:intergenic | 25.0% |
| ! | TCAATAAAGTTGTCATCAAA+TGG | - | chr4_1:42565223-42565242 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr4_1:42565249-42565268 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr4_1:42565248-42565267 | Msa0548490:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4_1:42565261-42565280 | Msa0548490:intron | 25.0% |
| ! | TTTGTCTATAAATAGAGACT+TGG | + | chr4_1:42565863-42565882 | Msa0548490:intron | 25.0% |
| ! | GCGTTGAAATGATTATTATT+GGG | - | chr4_1:42566004-42566023 | None:intergenic | 25.0% |
| ! | TGGATAATTAGAAGAATTCT+GGG | - | chr4_1:42566026-42566045 | None:intergenic | 25.0% |
| ! | TTGGATAATTAGAAGAATTC+TGG | - | chr4_1:42566027-42566046 | None:intergenic | 25.0% |
| ! | GATTAAGATAGTGAAAAACA+TGG | - | chr4_1:42566065-42566084 | None:intergenic | 25.0% |
| ! | GAATATGAAATAAAAAGTGG+TGG | + | chr4_1:42566261-42566280 | Msa0548490:intron | 25.0% |
| ! | ATATGAAATAAAAAGTGGTG+GGG | + | chr4_1:42566263-42566282 | Msa0548490:intron | 25.0% |
| ! | ACTTTCTCTCTATATTACTT+TGG | - | chr4_1:42566394-42566413 | None:intergenic | 25.0% |
| ! | TTTCTCAATGAAAAAACCAT+TGG | + | chr4_1:42566484-42566503 | Msa0548490:intron | 25.0% |
| !! | TCTTTTATCTCTCTTTTCAT+TGG | + | chr4_1:42566572-42566591 | Msa0548490:intron | 25.0% |
| ! | ACTTATAAGACCATTTACAA+TGG | - | chr4_1:42566790-42566809 | None:intergenic | 25.0% |
| ! | AATGTGAAGAAAAAAACAGA+GGG | - | chr4_1:42567239-42567258 | None:intergenic | 25.0% |
| ! | AAATGTGAAGAAAAAAACAG+AGG | - | chr4_1:42567240-42567259 | None:intergenic | 25.0% |
| ! | CATACAAACAAAGAACAATT+TGG | - | chr4_1:42567800-42567819 | None:intergenic | 25.0% |
| !!! | GGACAAATTTTTAGTCAAAT+AGG | + | chr4_1:42567935-42567954 | Msa0548490:intron | 25.0% |
| ! | AATAAGAAAAGCTGAGAAAT+AGG | - | chr4_1:42568003-42568022 | None:intergenic | 25.0% |
| !!! | TATTTTCCATTTTAGCTCTT+AGG | - | chr4_1:42568123-42568142 | None:intergenic | 25.0% |
| ! | ATCCATTAAATACAGTCATA+GGG | - | chr4_1:42568389-42568408 | None:intergenic | 25.0% |
| ATGAAGTAATTGGATCTAGT+TGG | + | chr4_1:42561993-42562012 | Msa0548490:intron | 30.0% | |
| GTGTATCATAATGACAATGA+TGG | + | chr4_1:42562023-42562042 | Msa0548490:intron | 30.0% | |
| TGACCTTTAATGCTTAACAA+TGG | + | chr4_1:42562389-42562408 | Msa0548490:intron | 30.0% | |
| AGTCCATTGTTAAGCATTAA+AGG | - | chr4_1:42562395-42562414 | None:intergenic | 30.0% | |
| TTTAATGCTTAACAATGGAC+TGG | + | chr4_1:42562394-42562413 | Msa0548490:intron | 30.0% | |
| ! | GCAAAAACATATGCTTTGAA+AGG | - | chr4_1:42562708-42562727 | None:intergenic | 30.0% |
| ATTCAAAAATAGGCGATCAA+CGG | - | chr4_1:42562809-42562828 | None:intergenic | 30.0% | |
| GTACATAATGGCAAATTAGT+TGG | + | chr4_1:42562854-42562873 | Msa0548490:intron | 30.0% | |
| AAATTAGTTGGGAATTAGCA+TGG | + | chr4_1:42562866-42562885 | Msa0548490:intron | 30.0% | |
| TACAAGGCTATCAAATTACA+AGG | + | chr4_1:42563023-42563042 | Msa0548490:intron | 30.0% | |
| CGAAGCATAAATGGTAAAAT+TGG | + | chr4_1:42563112-42563131 | Msa0548490:intron | 30.0% | |
| AGCTTCTTTCTACAAACAAT+AGG | + | chr4_1:42563234-42563253 | Msa0548490:intron | 30.0% | |
| ! | ACTTTTGTATTTTGCGTATG+TGG | - | chr4_1:42563476-42563495 | None:intergenic | 30.0% |
| AAATATAGCTCTTCAACCAT+TGG | + | chr4_1:42563747-42563766 | Msa0548490:intron | 30.0% | |
| TTAACATGACATTTGACCAA+TGG | - | chr4_1:42563766-42563785 | None:intergenic | 30.0% | |
| !!! | TGTTAAGTTGGTTTTCGATT+TGG | + | chr4_1:42563780-42563799 | Msa0548490:intron | 30.0% |
| !!! | GTTAAGTTGGTTTTCGATTT+GGG | + | chr4_1:42563781-42563800 | Msa0548490:intron | 30.0% |
| ! | TTTTGTGATGTAATTCTGCA+GGG | - | chr4_1:42563809-42563828 | None:intergenic | 30.0% |
| ! | ATTTTGTGATGTAATTCTGC+AGG | - | chr4_1:42563810-42563829 | None:intergenic | 30.0% |
| ! | AAAATGTTAGTGTCGAAACT+AGG | + | chr4_1:42563825-42563844 | Msa0548490:intron | 30.0% |
| !! | TAGAAAGAAGTGTCTAGTAT+AGG | - | chr4_1:42565014-42565033 | None:intergenic | 30.0% |
| CAAAGAAATAGAACATCATC+TGG | - | chr4_1:42565063-42565082 | None:intergenic | 30.0% | |
| ATCAAGAATTCATCCAATCA+CGG | - | chr4_1:42565111-42565130 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4_1:42565346-42565365 | None:intergenic | 30.0% |
| ! | CAATGGTGATGAATTAATTG+TGG | + | chr4_1:42565488-42565507 | Msa0548490:intron | 30.0% |
| AAAATGCTTTGTGGATAAGT+GGG | + | chr4_1:42565719-42565738 | Msa0548490:intron | 30.0% | |
| ! | GGCGTTGAAATGATTATTAT+TGG | - | chr4_1:42566005-42566024 | None:intergenic | 30.0% |
| TAAAAATGTGGTTGTCCATT+TGG | - | chr4_1:42566343-42566362 | None:intergenic | 30.0% | |
| AATGAAAAAACCATTGGAGA+GGG | + | chr4_1:42566490-42566509 | Msa0548490:intron | 30.0% | |
| ! | CAACTATATGAGACAACTTT+TGG | + | chr4_1:42566541-42566560 | Msa0548490:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4_1:42565274-42565293 | Msa0548490:intron | 30.0% | |
| GTGAAAAAGTTGTCACAAAA+TGG | + | chr4_1:42566665-42566684 | Msa0548490:intron | 30.0% | |
| GAATAAGAGAGAAAATGATG+TGG | + | chr4_1:42566725-42566744 | Msa0548490:intron | 30.0% | |
| GAGTAGTCATAGTTAATTGT+TGG | + | chr4_1:42566872-42566891 | Msa0548490:intron | 30.0% | |
| ! | GCCGATTTAGATATTTATTC+AGG | - | chr4_1:42566912-42566931 | None:intergenic | 30.0% |
| ATTCAAATAAAAAGCCAACG+TGG | - | chr4_1:42567145-42567164 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAACAGAG+GGG | - | chr4_1:42567238-42567257 | None:intergenic | 30.0% | |
| AGACACATTAATTACTGTTC+TGG | - | chr4_1:42567758-42567777 | None:intergenic | 30.0% | |
| ACGCATCTAGTAATTTGAAA+AGG | + | chr4_1:42567899-42567918 | Msa0548490:intron | 30.0% | |
| CGCATCTAGTAATTTGAAAA+GGG | + | chr4_1:42567900-42567919 | Msa0548490:intron | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | + | chr4_1:42567901-42567920 | Msa0548490:intron | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | + | chr4_1:42567913-42567932 | Msa0548490:intron | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | + | chr4_1:42567914-42567933 | Msa0548490:intron | 30.0% | |
| TCAAATAGGTGCTTACATAT+AGG | + | chr4_1:42567949-42567968 | Msa0548490:intron | 30.0% | |
| CAAATAGGTGCTTACATATA+GGG | + | chr4_1:42567950-42567969 | Msa0548490:intron | 30.0% | |
| GTATTTCCTAAGAGCTAAAA+TGG | + | chr4_1:42568114-42568133 | Msa0548490:intron | 30.0% | |
| TTTGAAAGTTCAAACACAAG+TGG | - | chr4_1:42568164-42568183 | None:intergenic | 30.0% | |
| AGCTTGACTAACATATAAGA+CGG | - | chr4_1:42568310-42568329 | None:intergenic | 30.0% | |
| ATCCCTATGACTGTATTTAA+TGG | + | chr4_1:42568384-42568403 | Msa0548490:intron | 30.0% | |
| GATCCATTAAATACAGTCAT+AGG | - | chr4_1:42568390-42568409 | None:intergenic | 30.0% | |
| GATGTGGTTTATATAGGAAA+GGG | - | chr4_1:42568472-42568491 | None:intergenic | 30.0% | |
| AAAAGGATAGGGTTAATGTT+TGG | - | chr4_1:42568942-42568961 | None:intergenic | 30.0% | |
| TTTCATTCTTCTTAGGCAAA+AGG | - | chr4_1:42568959-42568978 | None:intergenic | 30.0% | |
| CTTGGCATAATGAGATAAGA+TGG | - | chr4_1:42562148-42562167 | None:intergenic | 35.0% | |
| ! | CTCATTATGCCAAGAACTTT+TGG | + | chr4_1:42562154-42562173 | Msa0548490:intron | 35.0% |
| AATGTAGTGCCAAAAGTTCT+TGG | - | chr4_1:42562166-42562185 | None:intergenic | 35.0% | |
| TTGCAGTATGTTCCAATCTT+TGG | + | chr4_1:42562188-42562207 | Msa0548490:intron | 35.0% | |
| TGCAGTATGTTCCAATCTTT+GGG | + | chr4_1:42562189-42562208 | Msa0548490:intron | 35.0% | |
| ! | GTTCCAATCTTTGGGAAAAA+TGG | + | chr4_1:42562197-42562216 | Msa0548490:intron | 35.0% |
| !! | GAACCATTTTTCCCAAAGAT+TGG | - | chr4_1:42562203-42562222 | None:intergenic | 35.0% |
| ATTCACACACGAAAGTTCTA+AGG | + | chr4_1:42562536-42562555 | Msa0548490:intron | 35.0% | |
| ! | ATGATTCTGTATCTAGCTCA+AGG | + | chr4_1:42562589-42562608 | Msa0548490:intron | 35.0% |
| TTAGATTGTGTTAGCTGTTG+TGG | + | chr4_1:42562768-42562787 | Msa0548490:intron | 35.0% | |
| TCCAAGAGTTTGGTACATAA+TGG | + | chr4_1:42562842-42562861 | Msa0548490:intron | 35.0% | |
| ! | TAGCATGGCATTTTCAAAAG+AGG | + | chr4_1:42562881-42562900 | Msa0548490:intron | 35.0% |
| ! | AGCATGGCATTTTCAAAAGA+GGG | + | chr4_1:42562882-42562901 | Msa0548490:intron | 35.0% |
| GTAACATGATCATGTGTTCT+TGG | - | chr4_1:42563006-42563025 | None:intergenic | 35.0% | |
| GAACACATGATCATGTTACA+AGG | + | chr4_1:42563007-42563026 | Msa0548490:intron | 35.0% | |
| !! | TGTGTGGGATACATTTTGAT+GGG | - | chr4_1:42563077-42563096 | None:intergenic | 35.0% |
| ! | TTGTGTGGGATACATTTTGA+TGG | - | chr4_1:42563078-42563097 | None:intergenic | 35.0% |
| !!! | TTGGTGATTCTTTGTTTTGG+AGG | - | chr4_1:42563353-42563372 | None:intergenic | 35.0% |
| !! | GCATTGGTGATTCTTTGTTT+TGG | - | chr4_1:42563356-42563375 | None:intergenic | 35.0% |
| ! | AAAAGAGTTTAGGAGTTGGT+GGG | - | chr4_1:42563411-42563430 | None:intergenic | 35.0% |
| TAAAAGAGTTTAGGAGTTGG+TGG | - | chr4_1:42563412-42563431 | None:intergenic | 35.0% | |
| GGATAAAAGAGTTTAGGAGT+TGG | - | chr4_1:42563415-42563434 | None:intergenic | 35.0% | |
| CTGAAAATATTTATTGGGGG+TGG | - | chr4_1:42563436-42563455 | None:intergenic | 35.0% | |
| GCAATTCTTACATGCTCAAA+AGG | - | chr4_1:42563590-42563609 | None:intergenic | 35.0% | |
| ATCGTATTTAGGGGACATAA+TGG | + | chr4_1:42563636-42563655 | Msa0548490:intron | 35.0% | |
| GGTCAAATGTCATGTTAAGT+TGG | + | chr4_1:42563768-42563787 | Msa0548490:intron | 35.0% | |
| ! | TGTAACTAGTCTCAAAGTGT+TGG | - | chr4_1:42564216-42564235 | None:intergenic | 35.0% |
| CTGGGATGAAATAATTAGTG+TGG | + | chr4_1:42564266-42564285 | Msa0548490:intron | 35.0% | |
| TGTCTCATTTGTCTTGTCTT+GGG | - | chr4_1:42564739-42564758 | None:intergenic | 35.0% | |
| TTGTCTCATTTGTCTTGTCT+TGG | - | chr4_1:42564740-42564759 | None:intergenic | 35.0% | |
| TGATTGAATTATGTGTTGGG+CGG | - | chr4_1:42564939-42564958 | None:intergenic | 35.0% | |
| ATCACGGTGTGGAAATAAAT+TGG | - | chr4_1:42565095-42565114 | None:intergenic | 35.0% | |
| ATTTATTTCCACACCGTGAT+TGG | + | chr4_1:42565095-42565114 | Msa0548490:intron | 35.0% | |
| AGAGAGAAAAAGTAAGAGAG+AGG | + | chr4_1:42565284-42565303 | Msa0548490:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4_1:42565341-42565360 | Msa0548490:intron | 35.0% | |
| TAACTTATAGCGAGTAGGTA+TGG | - | chr4_1:42565459-42565478 | None:intergenic | 35.0% | |
| ATAAGTTAGACCAAGTGCAA+TGG | + | chr4_1:42565471-42565490 | Msa0548490:intron | 35.0% | |
| TAATTCATCACCATTGCACT+TGG | - | chr4_1:42565484-42565503 | None:intergenic | 35.0% | |
| ! | TGAAAGCATGATTCAACACT+TGG | + | chr4_1:42565514-42565533 | Msa0548490:intron | 35.0% |
| AAAAATGATGTGGAGGAAAG+AGG | + | chr4_1:42565568-42565587 | Msa0548490:intron | 35.0% | |
| GAAAATGCTTTGTGGATAAG+TGG | + | chr4_1:42565718-42565737 | Msa0548490:intron | 35.0% | |
| ! | GAGACTTGGTTCATTTGATT+TGG | + | chr4_1:42565877-42565896 | Msa0548490:intron | 35.0% |
| CCATTTGGTTGTCAAACAAA+TGG | - | chr4_1:42566328-42566347 | None:intergenic | 35.0% | |
| CCATTTGTTTGACAACCAAA+TGG | + | chr4_1:42566325-42566344 | Msa0548490:intron | 35.0% | |
| CAATGAAAAAACCATTGGAG+AGG | + | chr4_1:42566489-42566508 | Msa0548490:intron | 35.0% | |
| ! | AGAAAATGATGTGGAGTGTT+GGG | + | chr4_1:42566734-42566753 | Msa0548490:intron | 35.0% |
| AGAGTGTGAACCATTGTAAA+TGG | + | chr4_1:42566777-42566796 | Msa0548490:intron | 35.0% | |
| TGTGAAGAAAAAAACAGAGG+GGG | - | chr4_1:42567237-42567256 | None:intergenic | 35.0% | |
| ATTGAGTCCCCTATTTATAG+AGG | + | chr4_1:42567471-42567490 | Msa0548490:intron | 35.0% | |
| AGAATGTGCAAAGAGATGTT+GGG | + | chr4_1:42567591-42567610 | Msa0548490:intron | 35.0% | |
| AGATACTGGACCTAAGTTAA+TGG | + | chr4_1:42567710-42567729 | Msa0548490:intron | 35.0% | |
| GATACTGGACCTAAGTTAAT+GGG | + | chr4_1:42567711-42567730 | Msa0548490:intron | 35.0% | |
| ! | CATTAATTACTGTTCTGGAC+CGG | - | chr4_1:42567753-42567772 | None:intergenic | 35.0% |
| TGCAAGGATATAGTGATAGA+CGG | - | chr4_1:42568220-42568239 | None:intergenic | 35.0% | |
| CTATCACTATATCCTTGCAA+CGG | + | chr4_1:42568221-42568240 | Msa0548490:intron | 35.0% | |
| !! | GAATTGTTTTATCCGTTGCA+AGG | - | chr4_1:42568236-42568255 | None:intergenic | 35.0% |
| ! | CGTGTTTCTATTGGCTAATT+AGG | - | chr4_1:42568281-42568300 | None:intergenic | 35.0% |
| !! | CGGTATTTTCGTGTTTCTAT+TGG | - | chr4_1:42568290-42568309 | None:intergenic | 35.0% |
| CATAGGGATATGACAATAGA+CGG | - | chr4_1:42568373-42568392 | None:intergenic | 35.0% | |
| !! | AAGGGTTTTCGTGTTACTAT+TGG | - | chr4_1:42568454-42568473 | None:intergenic | 35.0% |
| CGATGTGGTTTATATAGGAA+AGG | - | chr4_1:42568473-42568492 | None:intergenic | 35.0% | |
| AGAAAATTTGAACGCGAAGA+AGG | - | chr4_1:42568540-42568559 | None:intergenic | 35.0% | |
| CTCGAAATCTCAGTTTGAAA+TGG | + | chr4_1:42568566-42568585 | Msa0548490:intron | 35.0% | |
| AGAAGAATAGAATCATCCCA+AGG | + | chr4_1:42568835-42568854 | Msa0548490:CDS | 35.0% | |
| GAGCTTGGTAAATTACTTTC+TGG | + | chr4_1:42568888-42568907 | Msa0548490:CDS | 35.0% | |
| TCTTCTTAGGCAAAAGGATA+GGG | - | chr4_1:42568953-42568972 | None:intergenic | 35.0% | |
| TTCTTCTTAGGCAAAAGGAT+AGG | - | chr4_1:42568954-42568973 | None:intergenic | 35.0% | |
| !!! | GCAGCTTTTTCATTCTTCTT+AGG | - | chr4_1:42568966-42568985 | None:intergenic | 35.0% |
| !! | ACAATGGACTGGTTTCGAAT+TGG | + | chr4_1:42562405-42562424 | Msa0548490:intron | 40.0% |
| GCCATTATGTACCAAACTCT+TGG | - | chr4_1:42562846-42562865 | None:intergenic | 40.0% | |
| ! | ATGGCATTTTCAAAAGAGGG+CGG | + | chr4_1:42562885-42562904 | Msa0548490:intron | 40.0% |
| ACAACCCACAAACCAAACAA+CGG | + | chr4_1:42562978-42562997 | Msa0548490:intron | 40.0% | |
| !! | TGTGTTGCTGAATTTTTGCC+TGG | - | chr4_1:42563215-42563234 | None:intergenic | 40.0% |
| TCTACAAACAATAGGCTCGT+TGG | + | chr4_1:42563242-42563261 | Msa0548490:intron | 40.0% | |
| GTGAAGTTCATCAGGGATTA+GGG | - | chr4_1:42563331-42563350 | None:intergenic | 40.0% | |
| TTTGGAGGTGAAGTTCATCA+GGG | - | chr4_1:42563338-42563357 | None:intergenic | 40.0% | |
| !! | TTTTGGAGGTGAAGTTCATC+AGG | - | chr4_1:42563339-42563358 | None:intergenic | 40.0% |
| ! | AGTTGATCGCTCTTTTCCTT+AGG | + | chr4_1:42563501-42563520 | Msa0548490:intron | 40.0% |
| CATTTATACGAAGGGACCTA+AGG | - | chr4_1:42563520-42563539 | None:intergenic | 40.0% | |
| ACCACATGTAGAATAGAGTC+CGG | + | chr4_1:42563911-42563930 | Msa0548490:intron | 40.0% | |
| GTGTCTGCATGTAAAAGAAC+CGG | - | chr4_1:42563933-42563952 | None:intergenic | 40.0% | |
| !! | CTAGTCTCAAAGTGTTGGAA+AGG | - | chr4_1:42564211-42564230 | None:intergenic | 40.0% |
| AAAATTGGACTGAGCTAGTG+TGG | + | chr4_1:42564885-42564904 | Msa0548490:intron | 40.0% | |
| TTCATGCTTGAGTCGTACTA+GGG | - | chr4_1:42565399-42565418 | None:intergenic | 40.0% | |
| TATAGCGAGTAGGTATGGTA+AGG | - | chr4_1:42565454-42565473 | None:intergenic | 40.0% | |
| TGGTCTAACTTATAGCGAGT+AGG | - | chr4_1:42565464-42565483 | None:intergenic | 40.0% | |
| CATGATTCAACACTTGGTCA+AGG | + | chr4_1:42565520-42565539 | Msa0548490:intron | 40.0% | |
| !! | TGCAATGGAGTGTTGAAGTT+GGG | + | chr4_1:42565543-42565562 | Msa0548490:intron | 40.0% |
| AAGTTGGGGGAAAAATGATG+TGG | + | chr4_1:42565558-42565577 | Msa0548490:intron | 40.0% | |
| CTGAGAGAGAAAATGCTTTG+TGG | + | chr4_1:42565710-42565729 | Msa0548490:intron | 40.0% | |
| ! | TCAACTTTTACCCTCTCCAA+TGG | - | chr4_1:42566503-42566522 | None:intergenic | 40.0% |
| TTGGAGAGGGTAAAAGTTGA+AGG | + | chr4_1:42566503-42566522 | Msa0548490:intron | 40.0% | |
| TGGAGAGGGTAAAAGTTGAA+GGG | + | chr4_1:42566504-42566523 | Msa0548490:intron | 40.0% | |
| GAGAAAATGATGTGGAGTGT+TGG | + | chr4_1:42566733-42566752 | Msa0548490:intron | 40.0% | |
| ! | AGTGTTGGGAAGAGAAAAAG+TGG | + | chr4_1:42566748-42566767 | Msa0548490:intron | 40.0% |
| GTGTTGGGAAGAGAAAAAGT+GGG | + | chr4_1:42566749-42566768 | Msa0548490:intron | 40.0% | |
| GAATTCTCTCGCGACTAATT+CGG | + | chr4_1:42566938-42566957 | Msa0548490:intron | 40.0% | |
| ! | GTGGTCTCTTAGAATTTGCT+CGG | - | chr4_1:42567126-42567145 | None:intergenic | 40.0% |
| ! | CAAATTCTAAGAGACCACGT+TGG | + | chr4_1:42567128-42567147 | Msa0548490:intron | 40.0% |
| AGGGGGTTTACATATAGGAA+CGG | - | chr4_1:42567220-42567239 | None:intergenic | 40.0% | |
| AACAGAGGGGGTTTACATAT+AGG | - | chr4_1:42567225-42567244 | None:intergenic | 40.0% | |
| ATTGATCGTACCTGATCAGA+AGG | + | chr4_1:42567282-42567301 | Msa0548490:intron | 40.0% | |
| GAATACGACAGAATGCTTCT+TGG | + | chr4_1:42567346-42567365 | Msa0548490:intron | 40.0% | |
| !! | ATCTCTACTGACTTGAGTGT+CGG | - | chr4_1:42567403-42567422 | None:intergenic | 40.0% |
| TCAGTAGAGATAGAGAGTGA+GGG | + | chr4_1:42567412-42567431 | Msa0548490:intron | 40.0% | |
| !! | ATAGAGAGTGAGGGTTTTAG+AGG | + | chr4_1:42567421-42567440 | Msa0548490:intron | 40.0% |
| AGGAAGAAAGAGTTCTACCT+TGG | + | chr4_1:42567441-42567460 | Msa0548490:intron | 40.0% | |
| GGAAGAAAGAGTTCTACCTT+GGG | + | chr4_1:42567442-42567461 | Msa0548490:intron | 40.0% | |
| GAAGAAAGAGTTCTACCTTG+GGG | + | chr4_1:42567443-42567462 | Msa0548490:intron | 40.0% | |
| AATCGCCAGAGAGTTTATTG+CGG | + | chr4_1:42567560-42567579 | Msa0548490:intron | 40.0% | |
| CAGAATGTGCAAAGAGATGT+TGG | + | chr4_1:42567590-42567609 | Msa0548490:intron | 40.0% | |
| GAATGTGCAAAGAGATGTTG+GGG | + | chr4_1:42567592-42567611 | Msa0548490:intron | 40.0% | |
| ATAATGCCAAACGTGGAGTT+TGG | + | chr4_1:42567679-42567698 | Msa0548490:intron | 40.0% | |
| TAATGCCAAACGTGGAGTTT+GGG | + | chr4_1:42567680-42567699 | Msa0548490:intron | 40.0% | |
| !! | GTTTGGGCTTTGAAAGATAC+TGG | + | chr4_1:42567696-42567715 | Msa0548490:intron | 40.0% |
| GATCTTTGGCCCATTAACTT+AGG | - | chr4_1:42567723-42567742 | None:intergenic | 40.0% | |
| !! | TAATGGGCCAAAGATCCTTT+TGG | + | chr4_1:42567727-42567746 | Msa0548490:intron | 40.0% |
| TGCTTACATATAGGGACGAA+GGG | + | chr4_1:42567958-42567977 | Msa0548490:intron | 40.0% | |
| GAAAGTTCAAACACAAGTGG+TGG | - | chr4_1:42568161-42568180 | None:intergenic | 40.0% | |
| ! | CGTGTTACTATTGGCTAATG+AGG | - | chr4_1:42568445-42568464 | None:intergenic | 40.0% |
| CCTTGCGATGTGGTTTATAT+AGG | - | chr4_1:42568478-42568497 | None:intergenic | 40.0% | |
| CCTATATAAACCACATCGCA+AGG | + | chr4_1:42568475-42568494 | Msa0548490:intron | 40.0% | |
| AAGCACGAAGACAACAAAGA+AGG | + | chr4_1:42568593-42568612 | Msa0548490:CDS | 40.0% | |
| AGCACGAAGACAACAAAGAA+GGG | + | chr4_1:42568594-42568613 | Msa0548490:CDS | 40.0% | |
| ATCGGTCGATACTTGAAGAA+AGG | + | chr4_1:42568702-42568721 | Msa0548490:CDS | 40.0% | |
| AGAACTGCTGCTAAGTATAC+TGG | - | chr4_1:42568759-42568778 | None:intergenic | 40.0% | |
| TCTTGAATATCTTGCTGCTG+AGG | + | chr4_1:42568776-42568795 | Msa0548490:CDS | 40.0% | |
| !! | TTCTTTGGCTCTTTGTTAGC+AGG | - | chr4_1:42568990-42569009 | None:intergenic | 40.0% |
| TGCTAACAAAGAGCCAAAGA+AGG | + | chr4_1:42568989-42569008 | Msa0548490:CDS | 40.0% | |
| ! | TGGCATTTTCAAAAGAGGGC+GGG | + | chr4_1:42562886-42562905 | Msa0548490:intron | 45.0% |
| AGAGACATGTTAGGAGACTG+AGG | - | chr4_1:42562950-42562969 | None:intergenic | 45.0% | |
| TCGATGAGCAGAGACATGTT+AGG | - | chr4_1:42562959-42562978 | None:intergenic | 45.0% | |
| CTTCAGCGGACATATTGTGT+GGG | - | chr4_1:42563092-42563111 | None:intergenic | 45.0% | |
| CCATTTATGCTTCGCTTCAG+CGG | - | chr4_1:42563106-42563125 | None:intergenic | 45.0% | |
| TAGCTAGCACTGCAAAGTCT+TGG | - | chr4_1:42563144-42563163 | None:intergenic | 45.0% | |
| ! | GAATTTTTGCCTGGTGTGTG+TGG | - | chr4_1:42563206-42563225 | None:intergenic | 45.0% |
| AAGCCGCTACTGCTAATAGA+CGG | + | chr4_1:42563294-42563313 | Msa0548490:intron | 45.0% | |
| TCACCGTCTATTAGCAGTAG+CGG | - | chr4_1:42563300-42563319 | None:intergenic | 45.0% | |
| GGTGAAGTTCATCAGGGATT+AGG | - | chr4_1:42563332-42563351 | None:intergenic | 45.0% | |
| GGGGGTGGATAAAAGAGTTT+AGG | - | chr4_1:42563421-42563440 | None:intergenic | 45.0% | |
| ! | GTATTTTGCGTATGTGGCTG+TGG | - | chr4_1:42563470-42563489 | None:intergenic | 45.0% |
| ACCGGACTCTATTCTACATG+TGG | - | chr4_1:42563915-42563934 | None:intergenic | 45.0% | |
| GCAGACACTGAGTTAGTGTT+TGG | + | chr4_1:42563945-42563964 | Msa0548490:intron | 45.0% | |
| ! | TGATGCATTGGTGTGTGTAG+TGG | - | chr4_1:42564787-42564806 | None:intergenic | 45.0% |
| GAATTCATCCAATCACGGTG+TGG | - | chr4_1:42565106-42565125 | None:intergenic | 45.0% | |
| GTTCATGCTTGAGTCGTACT+AGG | - | chr4_1:42565400-42565419 | None:intergenic | 45.0% | |
| AACACTTGGTCAAGGTGCAA+TGG | + | chr4_1:42565528-42565547 | Msa0548490:intron | 45.0% | |
| !! | GTGCAATGGAGTGTTGAAGT+TGG | + | chr4_1:42565542-42565561 | Msa0548490:intron | 45.0% |
| !! | GCAATGGAGTGTTGAAGTTG+GGG | + | chr4_1:42565544-42565563 | Msa0548490:intron | 45.0% |
| !! | CAATGGAGTGTTGAAGTTGG+GGG | + | chr4_1:42565545-42565564 | Msa0548490:intron | 45.0% |
| TTGGGGGAAAAATGATGTGG+AGG | + | chr4_1:42565561-42565580 | Msa0548490:intron | 45.0% | |
| GGGTTTACATATAGGAACGG+AGG | - | chr4_1:42567217-42567236 | None:intergenic | 45.0% | |
| TTTGAATGCGGTGGTTGTGA+CGG | + | chr4_1:42567318-42567337 | Msa0548490:intron | 45.0% | |
| AATGCTTCTTGGAGCGGATA+GGG | + | chr4_1:42567357-42567376 | Msa0548490:intron | 45.0% | |
| GTCAGTAGAGATAGAGAGTG+AGG | + | chr4_1:42567411-42567430 | Msa0548490:intron | 45.0% | |
| GAGTCCCCTATTTATAGAGG+TGG | + | chr4_1:42567474-42567493 | Msa0548490:intron | 45.0% | |
| TCCCCTATTTATAGAGGTGG+AGG | + | chr4_1:42567477-42567496 | Msa0548490:intron | 45.0% | |
| CCCTCCACCTCTATAAATAG+GGG | - | chr4_1:42567481-42567500 | None:intergenic | 45.0% | |
| CCCCTATTTATAGAGGTGGA+GGG | + | chr4_1:42567478-42567497 | Msa0548490:intron | 45.0% | |
| GCCCTCCACCTCTATAAATA+GGG | - | chr4_1:42567482-42567501 | None:intergenic | 45.0% | |
| AGCCCTCCACCTCTATAAAT+AGG | - | chr4_1:42567483-42567502 | None:intergenic | 45.0% | |
| ATCGCCAGAGAGTTTATTGC+GGG | + | chr4_1:42567561-42567580 | Msa0548490:intron | 45.0% | |
| ATGTTGGGGTTCGTTTGAAC+CGG | + | chr4_1:42567606-42567625 | Msa0548490:intron | 45.0% | |
| GTGCTTACATATAGGGACGA+AGG | + | chr4_1:42567957-42567976 | Msa0548490:intron | 45.0% | |
| GTGATAGACGGTCAGGATAT+TGG | - | chr4_1:42568208-42568227 | None:intergenic | 45.0% | |
| GGATATAGTGATAGACGGTC+AGG | - | chr4_1:42568215-42568234 | None:intergenic | 45.0% | |
| TAATTAGGCTCCTTGCGGAT+CGG | - | chr4_1:42568266-42568285 | None:intergenic | 45.0% | |
| TTGGCTAATTAGGCTCCTTG+CGG | - | chr4_1:42568271-42568290 | None:intergenic | 45.0% | |
| ! | GCTTTGAGTAAACGAAGACG+CGG | - | chr4_1:42568340-42568359 | None:intergenic | 45.0% |
| AATTCCACATCATCGATCCG+CGG | + | chr4_1:42568415-42568434 | Msa0548490:intron | 45.0% | |
| ! | ACGCGAAGAAGGAGTGATTT+TGG | - | chr4_1:42568529-42568548 | None:intergenic | 45.0% |
| AAGACAACAAAGAAGGGAGC+CGG | + | chr4_1:42568600-42568619 | Msa0548490:CDS | 45.0% | |
| GTGACAAGATCAATCAGAGC+CGG | + | chr4_1:42568657-42568676 | Msa0548490:CDS | 45.0% | |
| CAGTTCCCAGTTGGAAGAAT+CGG | + | chr4_1:42568684-42568703 | Msa0548490:CDS | 45.0% | |
| ! | ATCGACCGATTCTTCCAACT+GGG | - | chr4_1:42568692-42568711 | None:intergenic | 45.0% |
| ! | TATCGACCGATTCTTCCAAC+TGG | - | chr4_1:42568693-42568712 | None:intergenic | 45.0% |
| TGCTAAGTATACTGGAGCAC+CGG | - | chr4_1:42568751-42568770 | None:intergenic | 45.0% | |
| GTTAGGAACGATGAAGAGCT+TGG | + | chr4_1:42568873-42568892 | Msa0548490:CDS | 45.0% | |
| AACAAAGAGCCAAAGAAGGC+TGG | + | chr4_1:42568993-42569012 | Msa0548490:CDS | 45.0% | |
| GTTAGCTGTTGTGGTGACTG+AGG | + | chr4_1:42562777-42562796 | Msa0548490:intron | 50.0% | |
| CATGTTAGGAGACTGAGGAG+TGG | - | chr4_1:42562945-42562964 | None:intergenic | 50.0% | |
| !! | GGAGCCGTTGTTTGGTTTGT+GGG | - | chr4_1:42562985-42563004 | None:intergenic | 50.0% |
| !! | TGGAGCCGTTGTTTGGTTTG+TGG | - | chr4_1:42562986-42563005 | None:intergenic | 50.0% |
| GTGTTCTTGGAGCCGTTGTT+TGG | - | chr4_1:42562993-42563012 | None:intergenic | 50.0% | |
| GCTTCAGCGGACATATTGTG+TGG | - | chr4_1:42563093-42563112 | None:intergenic | 50.0% | |
| CCGCTGAAGCGAAGCATAAA+TGG | + | chr4_1:42563103-42563122 | Msa0548490:intron | 50.0% | |
| CTAGTTACATCACACCCACC+AGG | + | chr4_1:42564227-42564246 | Msa0548490:intron | 50.0% | |
| AACACACGACGGAATCGACA+CGG | - | chr4_1:42564594-42564613 | None:intergenic | 50.0% | |
| ATAGCCACAGCAAGCCTTGA+AGG | + | chr4_1:42564910-42564929 | Msa0548490:intron | 50.0% | |
| TAGCCACAGCAAGCCTTGAA+GGG | + | chr4_1:42564911-42564930 | Msa0548490:intron | 50.0% | |
| ACTAGTTGAAGCCTGTACCG+AGG | + | chr4_1:42565608-42565627 | Msa0548490:intron | 50.0% | |
| CTAGTTGAAGCCTGTACCGA+GGG | + | chr4_1:42565609-42565628 | Msa0548490:intron | 50.0% | |
| GCGCTATTGTTGGCCAAAAC+TGG | + | chr4_1:42565641-42565660 | Msa0548490:intron | 50.0% | |
| ! | GACACGTGGCTGATTCTGAT+TGG | + | chr4_1:42565743-42565762 | Msa0548490:intron | 50.0% |
| AACCACCGCATTCAAAGCAC+CGG | - | chr4_1:42567314-42567333 | None:intergenic | 50.0% | |
| CGACAGAATGCTTCTTGGAG+CGG | + | chr4_1:42567351-42567370 | Msa0548490:intron | 50.0% | |
| GAATGCTTCTTGGAGCGGAT+AGG | + | chr4_1:42567356-42567375 | Msa0548490:intron | 50.0% | |
| ATGCTTCTTGGAGCGGATAG+GGG | + | chr4_1:42567358-42567377 | Msa0548490:intron | 50.0% | |
| TCTGGCGGTTACGAAATCGT+GGG | + | chr4_1:42567531-42567550 | Msa0548490:intron | 50.0% | |
| CGTTCCCGCAATAAACTCTC+TGG | - | chr4_1:42567568-42567587 | None:intergenic | 50.0% | |
| AACATACCCTCTCTCCACGA+GGG | - | chr4_1:42567652-42567671 | None:intergenic | 50.0% | |
| GCGAGCAATAATGCCAAACG+TGG | + | chr4_1:42567672-42567691 | Msa0548490:intron | 50.0% | |
| CAAAGCCCAAACTCCACGTT+TGG | - | chr4_1:42567688-42567707 | None:intergenic | 50.0% | |
| TTGGCTAATGAGGTTTGCCG+CGG | - | chr4_1:42568435-42568454 | None:intergenic | 50.0% | |
| GAATTCAGAGCCTTGCGATG+TGG | - | chr4_1:42568488-42568507 | None:intergenic | 50.0% | |
| AGGAGGACCAAGGAAGAAGT+CGG | + | chr4_1:42568635-42568654 | Msa0548490:CDS | 50.0% | |
| !! | CTTGTCACCGACTTCTTCCT+TGG | - | chr4_1:42568645-42568664 | None:intergenic | 50.0% |
| CGATTCTTCCAACTGGGAAC+TGG | - | chr4_1:42568686-42568705 | None:intergenic | 50.0% | |
| CATCCCAAGGCATGTGTTGT+TGG | + | chr4_1:42568848-42568867 | Msa0548490:CDS | 50.0% | |
| CAGCCAACAACACATGCCTT+GGG | - | chr4_1:42568854-42568873 | None:intergenic | 50.0% | |
| ACAGCCAACAACACATGCCT+TGG | - | chr4_1:42568855-42568874 | None:intergenic | 50.0% | |
| ! | GGCATGTGTTGTTGGCTGTT+AGG | + | chr4_1:42568856-42568875 | Msa0548490:CDS | 50.0% |
| !! | TCTGGTGTCACGATTGCTCA+TGG | + | chr4_1:42568906-42568925 | Msa0548490:CDS | 50.0% |
| GGAGACTTTCCAGCCTTCTT+TGG | - | chr4_1:42569005-42569024 | None:intergenic | 50.0% | |
| GGCTGGAAAGTCTCCAAAGA+AGG | + | chr4_1:42569010-42569029 | Msa0548490:CDS | 50.0% | |
| GCAATGTAGCCACACACACC+AGG | + | chr4_1:42563194-42563213 | Msa0548490:intron | 55.0% | |
| AGTAGCGGCTTCAGACAGTG+TGG | - | chr4_1:42563285-42563304 | None:intergenic | 55.0% | |
| !! | GATCCCTTCAAGGCTTGCTG+TGG | - | chr4_1:42564917-42564936 | None:intergenic | 55.0% |
| GTGGATAAGTGGGTGACACG+TGG | + | chr4_1:42565729-42565748 | Msa0548490:intron | 55.0% | |
| CCTGATCAGAAGGTGACTGC+CGG | + | chr4_1:42567292-42567311 | Msa0548490:intron | 55.0% | |
| ! | GACTGCCGGTGCTTTGAATG+CGG | + | chr4_1:42567306-42567325 | Msa0548490:intron | 55.0% |
| TGCTTCTTGGAGCGGATAGG+GGG | + | chr4_1:42567359-42567378 | Msa0548490:intron | 55.0% | |
| ATTTCGTAACCGCCAGAGCC+AGG | - | chr4_1:42567528-42567547 | None:intergenic | 55.0% | |
| CTCTGGCGGTTACGAAATCG+TGG | + | chr4_1:42567530-42567549 | Msa0548490:intron | 55.0% | |
| GTGCACGAAGCAAACGAGAC+CGG | - | chr4_1:42567628-42567647 | None:intergenic | 55.0% | |
| ACATACCCTCTCTCCACGAG+GGG | - | chr4_1:42567651-42567670 | None:intergenic | 55.0% | |
| CAACATACCCTCTCTCCACG+AGG | - | chr4_1:42567653-42567672 | None:intergenic | 55.0% | |
| ! | GGGCCAAAGATCCTTTTGGC+CGG | + | chr4_1:42567731-42567750 | Msa0548490:intron | 55.0% |
| GGACCGGCCAAAAGGATCTT+TGG | - | chr4_1:42567737-42567756 | None:intergenic | 55.0% | |
| ! | ACTGTTCTGGACCGGCCAAA+AGG | - | chr4_1:42567745-42567764 | None:intergenic | 55.0% |
| TTTGCCGCGGATCGATGATG+TGG | - | chr4_1:42568422-42568441 | None:intergenic | 55.0% | |
| ACAACAAAGAAGGGAGCCGG+TGG | + | chr4_1:42568603-42568622 | Msa0548490:CDS | 55.0% | |
| TCCTCCTCCTTTCCTTCCAC+CGG | - | chr4_1:42568622-42568641 | None:intergenic | 55.0% | |
| GAAGGAAAGGAGGAGGACCA+AGG | + | chr4_1:42568625-42568644 | Msa0548490:CDS | 55.0% | |
| TCCAACTGGGAACTGGAGAC+CGG | - | chr4_1:42568679-42568698 | None:intergenic | 55.0% | |
| GGAAGATACGCTCAGCGTGT+CGG | + | chr4_1:42568723-42568742 | Msa0548490:CDS | 55.0% | |
| TGCTGCTGAGGTTCTCGAGT+TGG | + | chr4_1:42568788-42568807 | Msa0548490:CDS | 55.0% | |
| ! | GGTGTCACGATTGCTCATGG+TGG | + | chr4_1:42568909-42568928 | Msa0548490:CDS | 55.0% |
| TCACACCCACCAGGACAACC+AGG | + | chr4_1:42564236-42564255 | Msa0548490:intron | 60.0% | |
| CACACCCACCAGGACAACCA+GGG | + | chr4_1:42564237-42564256 | Msa0548490:intron | 60.0% | |
| ACACCCACCAGGACAACCAG+GGG | + | chr4_1:42564238-42564257 | Msa0548490:intron | 60.0% | |
| TTTCATCCCAGATCCGCCCC+TGG | - | chr4_1:42564257-42564276 | None:intergenic | 60.0% | |
| GTGTTGGGCGGATCCCTTCA+AGG | - | chr4_1:42564927-42564946 | None:intergenic | 60.0% | |
| GACACGTGGCGCGCTATTGT+TGG | + | chr4_1:42565631-42565650 | Msa0548490:intron | 60.0% | |
| TTGGCCAAAACTGGCGCGTG+TGG | + | chr4_1:42565650-42565669 | Msa0548490:intron | 60.0% | |
| ! | TGTGCCACACGCGCCAGTTT+TGG | - | chr4_1:42565657-42565676 | None:intergenic | 60.0% |
| CCGGCAGTCACCTTCTGATC+AGG | - | chr4_1:42567295-42567314 | None:intergenic | 60.0% | |
| ! | TGCCGGTGCTTTGAATGCGG+TGG | + | chr4_1:42567309-42567328 | Msa0548490:intron | 60.0% |
| GAATGCGGTGGTTGTGACGG+TGG | + | chr4_1:42567321-42567340 | Msa0548490:intron | 60.0% | |
| !! | TTGAGTGTCGGAGTGCCTGC+AGG | - | chr4_1:42567391-42567410 | None:intergenic | 60.0% |
| GGGACTCAATGCAGTCCCCA+AGG | - | chr4_1:42567461-42567480 | None:intergenic | 60.0% | |
| ! | ATCCGTTGAGGAGGCACACC+TGG | + | chr4_1:42567507-42567526 | Msa0548490:intron | 60.0% |
| AGCCAGGTGTGCCTCCTCAA+CGG | - | chr4_1:42567512-42567531 | None:intergenic | 60.0% | |
| CATACCCTCTCTCCACGAGG+GGG | - | chr4_1:42567650-42567669 | None:intergenic | 60.0% | |
| TTCCACGTCACCGATCCGCA+AGG | + | chr4_1:42568253-42568272 | Msa0548490:intron | 60.0% | |
| CAAAGAAGGGAGCCGGTGGA+AGG | + | chr4_1:42568607-42568626 | Msa0548490:CDS | 60.0% | |
| AAGGGAGCCGGTGGAAGGAA+AGG | + | chr4_1:42568612-42568631 | Msa0548490:CDS | 60.0% | |
| TACGCTCAGCGTGTCGGAAC+CGG | + | chr4_1:42568729-42568748 | Msa0548490:CDS | 60.0% | |
| !! | GCTGAGGTTCTCGAGTTGGC+TGG | + | chr4_1:42568792-42568811 | Msa0548490:CDS | 60.0% |
| AGATCCGCCCCTGGTTGTCC+TGG | - | chr4_1:42564248-42564267 | None:intergenic | 65.0% | |
| AGGACAACCAGGGGCGGATC+TGG | + | chr4_1:42564247-42564266 | Msa0548490:intron | 65.0% | |
| GGACAACCAGGGGCGGATCT+GGG | + | chr4_1:42564248-42564267 | Msa0548490:intron | 65.0% | |
| AGCCTGTACCGAGGGACACG+TGG | + | chr4_1:42565617-42565636 | Msa0548490:intron | 65.0% | |
| ATAGCGCGCCACGTGTCCCT+CGG | - | chr4_1:42565628-42565647 | None:intergenic | 65.0% | |
| GCAACCTGACGCGCTCCTGT+CGG | - | chr4_1:42565684-42565703 | None:intergenic | 65.0% | |
| CTTGGAGCGGATAGGGGGTG+TGG | + | chr4_1:42567364-42567383 | Msa0548490:intron | 65.0% | |
| ! | GATAGGGGGTGTGGACCTGC+AGG | + | chr4_1:42567373-42567392 | Msa0548490:intron | 65.0% |
| GGAGGGCTGCAGATCCGTTG+AGG | + | chr4_1:42567495-42567514 | Msa0548490:intron | 65.0% | |
| GGGCTGCAGATCCGTTGAGG+AGG | + | chr4_1:42567498-42567517 | Msa0548490:intron | 65.0% | |
| ! | TGAGGAGGCACACCTGGCTC+TGG | + | chr4_1:42567513-42567532 | Msa0548490:intron | 65.0% |
| TTGCTTCGTGCACCCCCTCG+TGG | + | chr4_1:42567635-42567654 | Msa0548490:intron | 65.0% | |
| TGCACCCCCTCGTGGAGAGA+GGG | + | chr4_1:42567643-42567662 | Msa0548490:intron | 65.0% | |
| CTCCTTGCGGATCGGTGACG+TGG | - | chr4_1:42568258-42568277 | None:intergenic | 65.0% | |
| GGAGCCGGTGGAAGGAAAGG+AGG | + | chr4_1:42568615-42568634 | Msa0548490:CDS | 65.0% | |
| GCCGGTGGAAGGAAAGGAGG+AGG | + | chr4_1:42568618-42568637 | Msa0548490:CDS | 65.0% | |
| GCCGGTCTCCAGTTCCCAGT+TGG | + | chr4_1:42568675-42568694 | Msa0548490:CDS | 65.0% | |
| CCGCCCCTGGTTGTCCTGGT+GGG | - | chr4_1:42564244-42564263 | None:intergenic | 70.0% | |
| CCCACCAGGACAACCAGGGG+CGG | + | chr4_1:42564241-42564260 | Msa0548490:intron | 70.0% | |
| TCCGCCCCTGGTTGTCCTGG+TGG | - | chr4_1:42564245-42564264 | None:intergenic | 70.0% | |
| CGCCACGTGTCCCTCGGTAC+AGG | - | chr4_1:42565622-42565641 | None:intergenic | 70.0% | |
| CGTGTGGCACACTCGCCGAC+AGG | + | chr4_1:42565666-42565685 | Msa0548490:intron | 70.0% | |
| !! | GGAGGCACACCTGGCTCTGG+CGG | + | chr4_1:42567516-42567535 | Msa0548490:intron | 70.0% |
| GTGCACCCCCTCGTGGAGAG+AGG | + | chr4_1:42567642-42567661 | Msa0548490:intron | 70.0% | |
| ! | CTCGCCGACAGGAGCGCGTC+AGG | + | chr4_1:42565677-42565696 | Msa0548490:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 42561993 | 42569037 | 42561993 | ID=Msa0548490;Name=Msa0548490 |
| chr4_1 | mRNA | 42561993 | 42569037 | 42561993 | ID=Msa0548490-mRNA-1;Parent=Msa0548490;Name=Msa0548490-mRNA-1;_AED=0.38;_eAED=0.40;_QI=0|0|0|0.5|1|1|4|0|159 |
| chr4_1 | exon | 42561993 | 42561997 | 42561993 | ID=Msa0548490-mRNA-1:exon:10953;Parent=Msa0548490-mRNA-1 |
| chr4_1 | exon | 42563701 | 42563707 | 42563701 | ID=Msa0548490-mRNA-1:exon:10954;Parent=Msa0548490-mRNA-1 |
| chr4_1 | exon | 42564103 | 42564111 | 42564103 | ID=Msa0548490-mRNA-1:exon:10955;Parent=Msa0548490-mRNA-1 |
| chr4_1 | exon | 42568579 | 42569037 | 42568579 | ID=Msa0548490-mRNA-1:exon:10956;Parent=Msa0548490-mRNA-1 |
| chr4_1 | CDS | 42561993 | 42561997 | 42561993 | ID=Msa0548490-mRNA-1:cds;Parent=Msa0548490-mRNA-1 |
| chr4_1 | CDS | 42563701 | 42563707 | 42563701 | ID=Msa0548490-mRNA-1:cds;Parent=Msa0548490-mRNA-1 |
| chr4_1 | CDS | 42564103 | 42564111 | 42564103 | ID=Msa0548490-mRNA-1:cds;Parent=Msa0548490-mRNA-1 |
| chr4_1 | CDS | 42568579 | 42569037 | 42568579 | ID=Msa0548490-mRNA-1:cds;Parent=Msa0548490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
