AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0551980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551980 MtrunA17_Chr4g0037131 99.281 278 2 0 2 279 10 287 0.0 566
Msa0551980 MtrunA17_Chr5g0405731 71.377 276 74 1 2 277 9 279 2.52e-149 419
Msa0551980 MtrunA17_Chr4g0030171 64.286 238 84 1 2 238 11 248 6.24e-109 315
Msa0551980 MtrunA17_Chr3g0124821 49.237 262 106 6 6 240 100 361 3.34e-77 239
Msa0551980 MtrunA17_Chr3g0137751 38.017 242 126 7 5 236 87 314 1.86e-43 150
Msa0551980 MtrunA17_Chr4g0068621 29.358 218 107 7 67 241 111 324 4.33e-15 74.3
Msa0551980 MtrunA17_Chr5g0426581 28.846 260 109 8 16 236 109 331 5.31e-15 73.9
Msa0551980 MtrunA17_Chr3g0129051 25.591 254 133 9 27 235 62 304 1.40e-14 72.8
Msa0551980 MtrunA17_Chr7g0225221 27.823 248 136 8 28 236 60 303 4.17e-14 71.2
Msa0551980 MtrunA17_Chr4g0072091 28.102 274 142 10 24 250 55 320 6.07e-14 70.9
Msa0551980 MtrunA17_Chr1g0188431 29.389 262 131 11 15 235 61 309 3.10e-13 68.9
Msa0551980 MtrunA17_Chr4g0053871 25.185 270 157 7 24 252 58 323 1.45e-12 66.6
Msa0551980 MtrunA17_Chr4g0013181 27.344 256 126 9 27 235 93 335 2.17e-12 66.6
Msa0551980 MtrunA17_Chr7g0254201 26.316 247 140 9 27 236 54 295 2.62e-12 65.9
Msa0551980 MtrunA17_Chr3g0129061 26.857 175 90 5 95 235 134 304 3.92e-12 65.5
Msa0551980 MtrunA17_Chr2g0278671 31.288 163 93 6 6 156 35 190 5.74e-12 65.1
Msa0551980 MtrunA17_Chr5g0432331 27.344 256 128 9 27 235 90 334 1.50e-11 63.9
Msa0551980 MtrunA17_Chr3g0106921 25.197 254 133 7 27 234 59 301 3.07e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551980 AT4G35000.1 78.853 279 58 1 2 279 9 287 2.53e-156 437
Msa0551980 AT4G35970.1 66.547 278 87 2 2 279 8 279 1.70e-132 376
Msa0551980 AT4G35970.2 71.163 215 61 1 2 216 8 221 6.84e-111 320
Msa0551980 AT3G09640.2 62.447 237 89 0 2 238 12 248 8.51e-107 310
Msa0551980 AT3G09640.1 62.447 237 89 0 2 238 12 248 8.51e-107 310
Msa0551980 AT1G07890.2 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.8 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.4 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.7 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.1 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.3 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.5 60.504 238 93 1 2 238 11 248 4.94e-102 298
Msa0551980 AT1G07890.6 59.916 237 94 1 2 237 11 247 6.08e-101 295
Msa0551980 AT4G08390.2 48.047 256 108 4 6 236 106 361 1.10e-75 235
Msa0551980 AT4G08390.5 48.047 256 108 4 6 236 106 361 1.10e-75 235
Msa0551980 AT4G08390.1 48.047 256 108 4 6 236 106 361 1.10e-75 235
Msa0551980 AT4G08390.3 48.047 256 108 4 6 236 105 360 1.18e-75 235
Msa0551980 AT1G77490.2 48.828 256 106 4 6 236 85 340 8.59e-75 234
Msa0551980 AT1G77490.1 48.828 256 106 4 6 236 85 340 8.82e-75 234
Msa0551980 AT4G08390.4 44.141 256 92 5 6 236 106 335 2.72e-65 207
Msa0551980 AT4G32320.1 39.035 228 118 5 18 236 108 323 1.04e-41 146
Msa0551980 AT4G09010.2 29.412 272 111 10 25 254 49 281 6.60e-16 76.3
Msa0551980 AT4G09010.1 29.412 272 111 10 25 254 114 346 1.25e-15 76.3
Msa0551980 AT4G09010.3 29.412 272 111 10 25 254 161 393 3.16e-15 75.5
Msa0551980 AT3G28200.1 30.366 191 91 4 82 236 115 299 3.57e-15 74.7
Msa0551980 AT4G30170.1 27.237 257 137 7 24 236 58 308 2.47e-14 72.4
Msa0551980 AT5G14130.1 26.667 255 141 7 24 236 63 313 2.71e-13 69.3
Msa0551980 AT5G17820.1 26.502 283 136 11 3 232 29 292 3.82e-13 68.9
Msa0551980 AT5G14130.2 26.667 255 141 7 24 236 104 354 4.04e-13 68.9
Msa0551980 AT1G44970.1 26.953 256 134 10 27 235 79 328 9.56e-13 67.8
Msa0551980 AT5G17820.2 26.148 283 137 10 3 232 82 345 1.18e-12 67.8
Msa0551980 AT4G37530.1 26.592 267 140 7 25 242 59 318 2.82e-12 66.2
Msa0551980 AT1G14550.1 27.037 270 151 10 7 235 39 303 8.06e-12 65.1
Msa0551980 AT4G37520.1 26.038 265 146 7 25 243 59 319 9.69e-12 64.7
Msa0551980 AT4G37530.2 34.459 148 81 4 25 159 59 203 3.03e-11 63.2
Msa0551980 AT2G18980.1 27.308 260 133 9 24 236 56 306 5.92e-11 62.4
Msa0551980 AT1G14540.1 30.909 165 98 5 7 159 34 194 8.83e-11 62.0

Find 94 sgRNAs with CRISPR-Local

Find 921 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGTTGCAGTTGAGGTTAC+TGG 0.120093 4_1:-48369911 Msa0551980:CDS
TCCAACAGACAGGGCTTTAT+TGG 0.192934 4_1:-48369094 Msa0551980:CDS
GATCTTCAAGAGAAAGTAAA+TGG 0.217985 4_1:+48365404 None:intergenic
CCTTTGTGCTTCCAGCTTGC+GGG 0.246744 4_1:-48369935 Msa0551980:intron
TTGCTACATTCTACATCTAT+TGG 0.258623 4_1:-48365512 Msa0551980:three_prime_UTR
GTTATGATGCTGCTCATAAT+TGG 0.266600 4_1:+48365455 None:intergenic
TGTCAATATCAGGATACTTT+TGG 0.287568 4_1:-48369145 Msa0551980:intron
TCAACATAACGGCAAAATTC+AGG 0.319924 4_1:+48369066 None:intergenic
GTACTGGCACAAAGCGCTTT+TGG 0.320365 4_1:-48365713 Msa0551980:CDS
TGCACAACATACCCTTCTTC+CGG 0.335633 4_1:+48369865 None:intergenic
TTGTTGCAGTTGAGGTTACT+GGG 0.345113 4_1:-48369910 Msa0551980:CDS
GGTAAATAATCACCTGATAA+AGG 0.356498 4_1:+48376953 None:intergenic
AAACCCAATACTGCTCGTTA+TGG 0.370113 4_1:+48365580 None:intergenic
AGGTCTGCATATGAGATCTT+AGG 0.374897 4_1:+48376973 None:intergenic
AAAGATATTGTTGCACTGTC+TGG 0.377559 4_1:-48369494 Msa0551980:CDS
CTCATATGCAGACCTTTATC+AGG 0.378885 4_1:-48376965 Msa0551980:intron
CCCACAGTCAACTTTGTTCC+CGG 0.379705 4_1:-48369884 Msa0551980:CDS
TGCTACATTCTACATCTATT+GGG 0.389003 4_1:-48365511 Msa0551980:three_prime_UTR
GCACAACATACCCTTCTTCC+GGG 0.398155 4_1:+48369866 None:intergenic
CATAAGAAACTTTCAGAGCT+TGG 0.401756 4_1:-48368373 Msa0551980:CDS
AACCCAATACTGCTCGTTAT+GGG 0.407704 4_1:+48365581 None:intergenic
GGCCCATAACGAGCAGTATT+GGG 0.411497 4_1:-48365583 Msa0551980:three_prime_UTR
ACCATTAGGTCCACCGGTCT+TGG 0.414832 4_1:+48377225 None:intergenic
CCATCAAACCCGGATCTCTC+TGG 0.417971 4_1:+48369367 None:intergenic
CCAGAGAGATCCGGGTTTGA+TGG 0.424242 4_1:-48369367 Msa0551980:CDS
TCGTTCCGAATAGAACCATT+AGG 0.431324 4_1:+48377211 None:intergenic
ATCAGGAAGCCGCCCATCTC+TGG 0.443990 4_1:+48369757 None:intergenic
TCAACTTTGTTCCCGGAAGA+AGG 0.446728 4_1:-48369877 Msa0551980:CDS
AAGATATTGTTGCACTGTCT+GGG 0.448168 4_1:-48369493 Msa0551980:CDS
ATAACAGTTGCCTTTGAGCT+TGG 0.448871 4_1:+48368343 None:intergenic
TGATTCAGGTGGCACGATGC+TGG 0.451069 4_1:-48377265 Msa0551980:intron
CGACAGGATTATTGATCATC+GGG 0.451924 4_1:+48365278 None:intergenic
TTTGATCTGTTCAGCTCGGT+TGG 0.453025 4_1:-48365621 Msa0551980:three_prime_UTR
ACCAAGACCGGTGGACCTAA+TGG 0.457462 4_1:-48377226 Msa0551980:CDS
TCCAATAAAGCCCTGTCTGT+TGG 0.463470 4_1:+48369093 None:intergenic
TGGCTTTGCGCCAAGCTCAA+AGG 0.464700 4_1:-48368353 Msa0551980:CDS
GCCAGTACGGTTGCATCCAC+AGG 0.465545 4_1:+48365728 None:intergenic
AACACACCTTGTTTAGCATC+AGG 0.470481 4_1:+48369740 None:intergenic
TGCTTAAACTTCCAACAGAC+AGG 0.474376 4_1:-48369104 Msa0551980:CDS
TTTCTCTTGAAGATCGGAAA+AGG 0.477637 4_1:-48365396 Msa0551980:three_prime_UTR
ATTTACTTTCTCTTGAAGAT+CGG 0.485075 4_1:-48365402 Msa0551980:three_prime_UTR
AGAGCACATCCAGAGAGATC+CGG 0.490027 4_1:-48369376 Msa0551980:CDS
GATCCGGGTTTGATGGCCCT+TGG 0.490119 4_1:-48369360 Msa0551980:CDS
GCCGCTGCAGTGGTGATCCT+CGG 0.490613 4_1:-48365680 Msa0551980:CDS
TCAAAAGTATGTACCAGAGA+TGG 0.493165 4_1:-48369770 Msa0551980:CDS
TCCTGTGGATGCAACCGTAC+TGG 0.493313 4_1:-48365729 Msa0551980:CDS
GTGGACCTAATGGTTCTATT+CGG 0.494846 4_1:-48377216 Msa0551980:CDS
TGGCCCATAACGAGCAGTAT+TGG 0.498931 4_1:-48365584 Msa0551980:three_prime_UTR
TTCAGAGGGTCCTCTGTCCA+AGG 0.512263 4_1:+48369343 None:intergenic
GATACTAAGAAAACATAGAC+TGG 0.514576 4_1:+48365545 None:intergenic
GTTTGATGGCCCTTGGACAG+AGG 0.519241 4_1:-48369353 Msa0551980:CDS
GAGCACATCCAGAGAGATCC+GGG 0.520069 4_1:-48369375 Msa0551980:CDS
TGCGGGTGTTGTTGCAGTTG+AGG 0.524490 4_1:-48369918 Msa0551980:CDS
TTGTATGAAACTCACAAAAG+AGG 0.531958 4_1:-48365653 Msa0551980:CDS
TTCTGTTGGCGATGAGAGCA+CGG 0.540281 4_1:+48377432 None:intergenic
TGTCCAAGGGCCATCAAACC+CGG 0.543652 4_1:+48369357 None:intergenic
ATCTTCAAGAGAAAGTAAAT+GGG 0.544266 4_1:+48365405 None:intergenic
CAAAAGTATGTACCAGAGAT+GGG 0.549843 4_1:-48369769 Msa0551980:CDS
TGTATGAAACTCACAAAAGA+GGG 0.552331 4_1:-48365652 Msa0551980:CDS
CAACTTTGTTCCCGGAAGAA+GGG 0.554225 4_1:-48369876 Msa0551980:intron
GAGGGGAGCACAGTTTCTGT+TGG 0.557155 4_1:+48377418 None:intergenic
TATGAGTTATCAAACTTCAG+AGG 0.559558 4_1:+48369328 None:intergenic
TCCAATAGCAACTGCTCCTG+TGG 0.562764 4_1:-48365744 Msa0551980:intron
ACGACAGGATTATTGATCAT+CGG 0.568417 4_1:+48365277 None:intergenic
AAAAGCGCTTTGTGCCAGTA+CGG 0.571570 4_1:+48365715 None:intergenic
GTTAACAATGGAGTATCTCA+AGG 0.574436 4_1:-48377480 None:intergenic
CGGCTTCCTGATGCTAAACA+AGG 0.575592 4_1:-48369746 Msa0551980:intron
AGACTTTGATCTGTTCAGCT+CGG 0.578767 4_1:-48365625 Msa0551980:three_prime_UTR
TATGATGCAAAGACCAAGAC+CGG 0.589691 4_1:-48377238 Msa0551980:CDS
AATAGAACCATTAGGTCCAC+CGG 0.593542 4_1:+48377219 None:intergenic
TACGCTAAGCGAAGCATGAG+GGG 0.595394 4_1:+48377401 None:intergenic
TCGCATACAGCTCAACATAA+CGG 0.598708 4_1:+48369055 None:intergenic
ATGAGTTATCAAACTTCAGA+GGG 0.599283 4_1:+48369329 None:intergenic
CTCTTGAAGATCGGAAAAGG+AGG 0.601669 4_1:-48365393 Msa0551980:three_prime_UTR
TTATGTCACAGAGGAAGTCA+AGG 0.604368 4_1:-48377004 Msa0551980:intron
ACTGTCTGGGGCACATACGC+TGG 0.608033 4_1:-48369480 Msa0551980:intron
CCATACGATAAAAGATATCA+CGG 0.612766 4_1:+48369528 None:intergenic
CCGGGAACAAAGTTGACTGT+GGG 0.622160 4_1:+48369884 None:intergenic
TCAGAGGGTCCTCTGTCCAA+GGG 0.622882 4_1:+48369344 None:intergenic
TTACGCTAAGCGAAGCATGA+GGG 0.626450 4_1:+48377400 None:intergenic
ACCGAGGATCACCACTGCAG+CGG 0.626779 4_1:+48365679 None:intergenic
TCCGGGAACAAAGTTGACTG+TGG 0.630776 4_1:+48369883 None:intergenic
AGATATTGTTGCACTGTCTG+GGG 0.639389 4_1:-48369492 Msa0551980:CDS
TTATGTTGAGCTGTATGCGA+AGG 0.641815 4_1:-48369052 Msa0551980:intron
TGTTGCAGTTGAGGTTACTG+GGG 0.642422 4_1:-48369909 Msa0551980:CDS
CTTACGCTAAGCGAAGCATG+AGG 0.649786 4_1:+48377399 None:intergenic
AGTTGTAGCTGCCGCTGCAG+TGG 0.652303 4_1:-48365690 Msa0551980:CDS
GCTTAAACTTCCAACAGACA+GGG 0.655046 4_1:-48369103 Msa0551980:CDS
GTTGCAGTTGAGGTTACTGG+GGG 0.656351 4_1:-48369908 Msa0551980:CDS
TAATGGTTCTATTCGGAACG+AGG 0.677025 4_1:-48377209 Msa0551980:CDS
GAGTTTCATACAAGTAACCG+AGG 0.700364 4_1:+48365663 None:intergenic
GGTTGGATGTCACGTCTGTG+TGG 0.701585 4_1:-48365604 Msa0551980:three_prime_UTR
GATGCAAAGACCAAGACCGG+TGG 0.716515 4_1:-48377235 Msa0551980:CDS
AAGTATGTACCAGAGATGGG+CGG 0.726843 4_1:-48369766 Msa0551980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATAAAATATT+GGG + chr4_1:48373536-48373555 None:intergenic 0.0%
!! AAAAAATAAAAATAAAATAT+TGG + chr4_1:48373537-48373556 None:intergenic 0.0%
!!! TTATTTTTTAATTTTTATTT+TGG - chr4_1:48373548-48373567 Msa0551980:intron 0.0%
!! AATAATAAAAAGATATAGAA+AGG + chr4_1:48373307-48373326 None:intergenic 10.0%
!! GAAAATAAAATAAGAATTTA+TGG + chr4_1:48373344-48373363 None:intergenic 10.0%
!! AGTATTCAATTATTATAGTT+CGG + chr4_1:48366268-48366287 None:intergenic 15.0%
!!! ATATTTGTTCCATATTTTAA+GGG + chr4_1:48366921-48366940 None:intergenic 15.0%
!! ATCAAAATTTATTATAAGCA+GGG + chr4_1:48369043-48369062 None:intergenic 15.0%
!! TTTCATAACTATCAAAATTT+AGG + chr4_1:48372345-48372364 None:intergenic 15.0%
!! TACTATATATGAAAATCAAA+CGG + chr4_1:48372479-48372498 None:intergenic 15.0%
!!! AGATTCATTTAATTTAATGA+TGG + chr4_1:48374272-48374291 None:intergenic 15.0%
!!! TTTTTTTGTTAATCTGATTC+AGG - chr4_1:48365475-48365494 Msa0551980:three_prime_UTR 20.0%
!! TAGTATGAATATCATATCAT+TGG - chr4_1:48365699-48365718 Msa0551980:CDS 20.0%
!! TAGAAGACAATTTCTTAAAA+AGG + chr4_1:48366411-48366430 None:intergenic 20.0%
!! TAAAAGTAACCCTTAAAATA+TGG - chr4_1:48366909-48366928 Msa0551980:intron 20.0%
!!! CATATTTGTTCCATATTTTA+AGG + chr4_1:48366922-48366941 None:intergenic 20.0%
!! TTATGTAGATGATATTCTTA+TGG + chr4_1:48368143-48368162 None:intergenic 20.0%
!! TAAGAATATCATCTACATAA+AGG - chr4_1:48368143-48368162 Msa0551980:intron 20.0%
!! GATCAAAATTTATTATAAGC+AGG + chr4_1:48369044-48369063 None:intergenic 20.0%
!!! TACTCTAATTTGAAAGTTTT+CGG + chr4_1:48369186-48369205 None:intergenic 20.0%
!!! CCTTTGAAAAATTTAAAGAA+TGG + chr4_1:48369545-48369564 None:intergenic 20.0%
!!! CCATTCTTTAAATTTTTCAA+AGG - chr4_1:48369542-48369561 Msa0551980:CDS 20.0%
!!! TCTATTATTGATGATTATTC+TGG + chr4_1:48369606-48369625 None:intergenic 20.0%
!!! CATGGTTTATATATTTTAGA+TGG + chr4_1:48369930-48369949 None:intergenic 20.0%
!! ATATTTATAAGCATGTTTGA+TGG + chr4_1:48370035-48370054 None:intergenic 20.0%
!! ATTAAATTTCTCTTAAGTTC+AGG - chr4_1:48370053-48370072 Msa0551980:intron 20.0%
!! ACAAATAAAACATTTGTACT+TGG - chr4_1:48370409-48370428 Msa0551980:intron 20.0%
!!! CAATAAGATTATTGATGATT+TGG + chr4_1:48370729-48370748 None:intergenic 20.0%
!! TAAAAGTAACCCTTAAAATA+TGG - chr4_1:48366909-48366928 Msa0551980:intron 20.0%
!!! AGATTTGTTCCATATTTTAA+GGG + chr4_1:48371653-48371672 None:intergenic 20.0%
!! ACATATAAAGTGATTAAATC+CGG - chr4_1:48372649-48372668 Msa0551980:intron 20.0%
!! ATAACTAATATTGTAACGAA+AGG + chr4_1:48372918-48372937 None:intergenic 20.0%
!!! TTTAATTTTGTTGATGTGTA+GGG + chr4_1:48373134-48373153 None:intergenic 20.0%
!!! TTTTAATTTTGTTGATGTGT+AGG + chr4_1:48373135-48373154 None:intergenic 20.0%
!!! ATTTTATTTTCTGTGTTTCA+AGG - chr4_1:48373353-48373372 Msa0551980:intron 20.0%
!!! TTTTATTTTCTGTGTTTCAA+GGG - chr4_1:48373354-48373373 Msa0551980:intron 20.0%
!! ATATTGACAAAGATATTTAG+CGG + chr4_1:48373598-48373617 None:intergenic 20.0%
!! TAAATATCTTTGTCAATATC+AGG - chr4_1:48373599-48373618 Msa0551980:intron 20.0%
!!! TTTTTAGCAAAACAGAAAAT+TGG + chr4_1:48374193-48374212 None:intergenic 20.0%
!! ATATATACTACTTAACTACT+AGG - chr4_1:48374547-48374566 Msa0551980:intron 20.0%
!! ATCAAACAAATGAAAACATA+AGG - chr4_1:48374664-48374683 Msa0551980:intron 20.0%
!!! TTGGAGATTTTTTTTTTCTT+TGG + chr4_1:48375087-48375106 None:intergenic 20.0%
!!! TTTATGAATGTTCGATTTTA+TGG + chr4_1:48376435-48376454 None:intergenic 20.0%
!! ATATATACTACTTAACTACT+AGG - chr4_1:48374547-48374566 Msa0551980:intron 20.0%
! TCTTATGTTCGATAATTTCA+CGG - chr4_1:48365439-48365458 Msa0551980:three_prime_UTR 25.0%
!!! AAGAAAGCTATTGATTTTTG+CGG - chr4_1:48365600-48365619 Msa0551980:three_prime_UTR 25.0%
! TTTGCTAGAAATTGTAGAAT+GGG - chr4_1:48365880-48365899 Msa0551980:intron 25.0%
! AGAAACTCATATCATTATAG+TGG + chr4_1:48366646-48366665 None:intergenic 25.0%
! TCTTTACAAAGAGATATTGA+AGG - chr4_1:48366663-48366682 Msa0551980:intron 25.0%
! ATTGAAGAATATATGAAGGT+TGG + chr4_1:48367179-48367198 None:intergenic 25.0%
! CTTCATTGAAGAATATATGA+AGG + chr4_1:48367183-48367202 None:intergenic 25.0%
!!! ATGAAAGATTCTAAAGTTGT+TGG + chr4_1:48367941-48367960 None:intergenic 25.0%
! GTTTGATGAGTTTCTTATAA+AGG + chr4_1:48368245-48368264 None:intergenic 25.0%
! TGTTGAAGAAATCTTTGTAT+GGG + chr4_1:48368300-48368319 None:intergenic 25.0%
! GGTAAAACATTGTTCTATAA+GGG + chr4_1:48368464-48368483 None:intergenic 25.0%
! TGGTAAAACATTGTTCTATA+AGG + chr4_1:48368465-48368484 None:intergenic 25.0%
!! TTACAATGAAATCTTTTCAC+CGG + chr4_1:48368488-48368507 None:intergenic 25.0%
! TTCATTACCTAAGAATCAAA+GGG + chr4_1:48368623-48368642 None:intergenic 25.0%
! TTTCATTACCTAAGAATCAA+AGG + chr4_1:48368624-48368643 None:intergenic 25.0%
! ATTAATTCACCTGATAGATA+CGG + chr4_1:48368811-48368830 None:intergenic 25.0%
!!! ATAATAAATTTTGATCCTCC+AGG - chr4_1:48369048-48369067 Msa0551980:intron 25.0%
! ACACTTGTAGAAAATCAAAT+TGG + chr4_1:48369519-48369538 None:intergenic 25.0%
!! TATTGATGATTATTCTGGAA+GGG + chr4_1:48369601-48369620 None:intergenic 25.0%
!! TTATTGATGATTATTCTGGA+AGG + chr4_1:48369602-48369621 None:intergenic 25.0%
!!! TGTTTTATTTGTCACAACTA+TGG + chr4_1:48370401-48370420 None:intergenic 25.0%
! AATCAATAACCAAGTATCAT+GGG + chr4_1:48371118-48371137 None:intergenic 25.0%
! AAATCAATAACCAAGTATCA+TGG + chr4_1:48371119-48371138 None:intergenic 25.0%
! AGAAACTCATATCATTATAG+TGG + chr4_1:48366646-48366665 None:intergenic 25.0%
! TCTTTACAAAGAGATATTGA+AGG - chr4_1:48366663-48366682 Msa0551980:intron 25.0%
! TTATGTGATGTAGAAAAACA+GGG + chr4_1:48371593-48371612 None:intergenic 25.0%
! ATTATGTGATGTAGAAAAAC+AGG + chr4_1:48371594-48371613 None:intergenic 25.0%
!!! CAGATTTGTTCCATATTTTA+AGG + chr4_1:48371654-48371673 None:intergenic 25.0%
! TGTTCTATTCAATCATTTAC+AGG - chr4_1:48371906-48371925 Msa0551980:intron 25.0%
! ATTATATTATGCCTTGGATT+AGG - chr4_1:48371998-48372017 Msa0551980:intron 25.0%
! GAAATAAAGAGTTCAGAAAA+TGG + chr4_1:48372093-48372112 None:intergenic 25.0%
!! AGTTGCCAAAATTTGTTTAA+GGG + chr4_1:48372190-48372209 None:intergenic 25.0%
!! AAGTTGCCAAAATTTGTTTA+AGG + chr4_1:48372191-48372210 None:intergenic 25.0%
! TGAAATAGAACTACATTTCT+TGG - chr4_1:48372283-48372302 Msa0551980:intron 25.0%
! TTACATGTATTCAAACTTAG+TGG - chr4_1:48372426-48372445 Msa0551980:intron 25.0%
! GACACTTACAAAGTAATTAA+GGG + chr4_1:48372590-48372609 None:intergenic 25.0%
! AGACACTTACAAAGTAATTA+AGG + chr4_1:48372591-48372610 None:intergenic 25.0%
! AATTATTTATCACTCATGCA+GGG - chr4_1:48372701-48372720 Msa0551980:intron 25.0%
!!! TGCATATCTTGTTTTATACA+AGG + chr4_1:48372731-48372750 None:intergenic 25.0%
! TATAAACATGTCAATGCTAT+TGG - chr4_1:48373187-48373206 Msa0551980:intron 25.0%
! ATGGACTTATAAAATGCTAT+TGG + chr4_1:48373813-48373832 None:intergenic 25.0%
! ATATTAAGTAAGAAAGCTGT+TGG + chr4_1:48374013-48374032 None:intergenic 25.0%
! TCCTTATGTTACAACTATTA+AGG - chr4_1:48374089-48374108 Msa0551980:intron 25.0%
! ACCTTAATAGTTGTAACATA+AGG + chr4_1:48374093-48374112 None:intergenic 25.0%
!! AAAATTGGCATGAATGTTTT+GGG + chr4_1:48374178-48374197 None:intergenic 25.0%
! TAATCGAAGAAAATCAATAG+TGG - chr4_1:48374214-48374233 Msa0551980:intron 25.0%
!!! TTTTAAGGCTTTGTTGATAT+TGG + chr4_1:48374827-48374846 None:intergenic 25.0%
! AATATCAACAAAGCCTTAAA+AGG - chr4_1:48374826-48374845 Msa0551980:intron 25.0%
!!! TATTTGTTATGCTTCATTCT+TGG + chr4_1:48375063-48375082 None:intergenic 25.0%
!!! TGTTTTGATAATCAATTGTG+AGG + chr4_1:48375581-48375600 None:intergenic 25.0%
! ACTAAATCAATAATCCATTG+AGG + chr4_1:48375717-48375736 None:intergenic 25.0%
!! AATGTAAAGTAGTTTTTCCA+AGG - chr4_1:48375865-48375884 Msa0551980:intron 25.0%
!! TTGAAGATGAGATGAATTTT+TGG + chr4_1:48376179-48376198 None:intergenic 25.0%
!!! TGATTCATTTTGACAATTGA+CGG + chr4_1:48376288-48376307 None:intergenic 25.0%
!!! GTTTTTCCTTCTGTTATTTT+TGG + chr4_1:48376517-48376536 None:intergenic 25.0%
! TTCTACTTTAATTGCCAATT+CGG + chr4_1:48376656-48376675 None:intergenic 25.0%
! ATCTTCAAGAGAAAGTAAAT+GGG + chr4_1:48377352-48377371 None:intergenic 25.0%
! ATTTACTTTCTCTTGAAGAT+CGG - chr4_1:48377352-48377371 Msa0551980:intron 25.0%
! TTTTGTTAATCTGATTCAGG+TGG - chr4_1:48365478-48365497 Msa0551980:three_prime_UTR 30.0%
!! TTTTCTCATGGTGCTAATAA+TGG - chr4_1:48365573-48365592 Msa0551980:three_prime_UTR 30.0%
AAACAAGACAACTCTTAGAA+AGG + chr4_1:48365728-48365747 None:intergenic 30.0%
GGTAAATAATCACCTGATAA+AGG + chr4_1:48365804-48365823 None:intergenic 30.0%
TTTACATAACAAGTGAGTGA+AGG + chr4_1:48365825-48365844 None:intergenic 30.0%
! TCAATAATTTTGTGCTCAAG+TGG - chr4_1:48365857-48365876 Msa0551980:intron 30.0%
! GTTTGCTAGAAATTGTAGAA+TGG - chr4_1:48365879-48365898 Msa0551980:intron 30.0%
TTGCTAGAAATTGTAGAATG+GGG - chr4_1:48365881-48365900 Msa0551980:intron 30.0%
GAGACAAACAATGTATAAAG+AGG + chr4_1:48366033-48366052 None:intergenic 30.0%
CTTTATACATTGTTTGTCTC+TGG - chr4_1:48366033-48366052 Msa0551980:intron 30.0%
TGAAACTGAATCTCATTGTT+AGG - chr4_1:48366142-48366161 Msa0551980:intron 30.0%
AAAAAGGTAAACAAGCACAA+GGG + chr4_1:48366395-48366414 None:intergenic 30.0%
TAAAAAGGTAAACAAGCACA+AGG + chr4_1:48366396-48366415 None:intergenic 30.0%
! ACATCAAGTTTTTATTGGTG+TGG + chr4_1:48366459-48366478 None:intergenic 30.0%
ACCAATAAAAACTTGATGTG+TGG - chr4_1:48366460-48366479 Msa0551980:intron 30.0%
! TCCACACATCAAGTTTTTAT+TGG + chr4_1:48366464-48366483 None:intergenic 30.0%
ATAAAACAGCAAGAGATGAA+AGG - chr4_1:48366541-48366560 Msa0551980:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG + chr4_1:48366641-48366660 None:intergenic 30.0%
!!! TCCTAATAGTGCTTTTTTCA+AGG - chr4_1:48366756-48366775 Msa0551980:intron 30.0%
!! ACCTTGAAAAAAGCACTATT+AGG + chr4_1:48366760-48366779 None:intergenic 30.0%
!! ATAAACCCTAGTTTGTTTGT+TGG - chr4_1:48366827-48366846 Msa0551980:intron 30.0%
TTATGTGGTGTAGAAAAACA+GGG + chr4_1:48366861-48366880 None:intergenic 30.0%
ATTATGTGGTGTAGAAAAAC+AGG + chr4_1:48366862-48366881 None:intergenic 30.0%
GTGGAAGTTAACTTAAAATC+AGG + chr4_1:48367089-48367108 None:intergenic 30.0%
! AAGGTGATTGATGGTTAAAT+TGG + chr4_1:48367146-48367165 None:intergenic 30.0%
!! TCTTGATCTTGGTAATGATT+TGG - chr4_1:48367229-48367248 Msa0551980:intron 30.0%
! AAAGGTATGATTGGAGAATT+GGG + chr4_1:48367443-48367462 None:intergenic 30.0%
! ATATGGTTGAAAGGTATGAT+TGG + chr4_1:48367452-48367471 None:intergenic 30.0%
AATCATACCTTTCAACCATA+TGG - chr4_1:48367451-48367470 Msa0551980:intron 30.0%
GGATTTGTGTTTACTTTGTT+CGG + chr4_1:48367572-48367591 None:intergenic 30.0%
ATGCAATAAGTGTGATAAGT+CGG + chr4_1:48367772-48367791 None:intergenic 30.0%
ACTTATCACACTTATTGCAT+AGG - chr4_1:48367772-48367791 Msa0551980:intron 30.0%
ACTTGGTATGGATATCATAA+GGG + chr4_1:48368032-48368051 None:intergenic 30.0%
TACTTGGTATGGATATCATA+AGG + chr4_1:48368033-48368052 None:intergenic 30.0%
! GAATGATGAATTTGAGATGA+AGG + chr4_1:48368077-48368096 None:intergenic 30.0%
TATCATCTACATAAAGGAGA+AGG - chr4_1:48368149-48368168 Msa0551980:intron 30.0%
CTGTTGAAGAAATCTTTGTA+TGG + chr4_1:48368301-48368320 None:intergenic 30.0%
TGATCTTGAGTTAGAACAAA+TGG + chr4_1:48368416-48368435 None:intergenic 30.0%
!! TTGTTCTATAAGGGTACTTA+TGG + chr4_1:48368455-48368474 None:intergenic 30.0%
! ATAGAACAATGTTTTACCAC+CGG - chr4_1:48368466-48368485 Msa0551980:intron 30.0%
GAATGAGGAAATACTTTCAT+TGG + chr4_1:48368671-48368690 None:intergenic 30.0%
CATTCAAAGCATAAGATATG+AGG - chr4_1:48368776-48368795 Msa0551980:intron 30.0%
! GTTGTGAAGTGTATTTTCAT+GGG + chr4_1:48369117-48369136 None:intergenic 30.0%
! AGTTGTGAAGTGTATTTTCA+TGG + chr4_1:48369118-48369137 None:intergenic 30.0%
AGCATCAGTTAAAACTCATA+GGG + chr4_1:48369646-48369665 None:intergenic 30.0%
TTCTGTGATAATTGCACATT+AGG + chr4_1:48369753-48369772 None:intergenic 30.0%
TAACTAAACTGTGGCATTTA+AGG + chr4_1:48369857-48369876 None:intergenic 30.0%
GTGCATTAGTTATAGCTAAA+GGG + chr4_1:48369962-48369981 None:intergenic 30.0%
TATTGTACTAGAATTGAACG+TGG + chr4_1:48370005-48370024 None:intergenic 30.0%
AATAAGGCTTGCAAAATTCA+AGG + chr4_1:48370146-48370165 None:intergenic 30.0%
!! AAAGGAGTACTTTGAAACTT+TGG + chr4_1:48370204-48370223 None:intergenic 30.0%
TTCAAGGATACTATGCTTTA+TGG + chr4_1:48370629-48370648 None:intergenic 30.0%
AGTATCCTTGAAATTCTCAA+AGG - chr4_1:48370637-48370656 Msa0551980:intron 30.0%
!! AAATGTGTTGAAGCATTGAA+GGG + chr4_1:48371010-48371029 None:intergenic 30.0%
!! AAAATGTGTTGAAGCATTGA+AGG + chr4_1:48371011-48371030 None:intergenic 30.0%
TGGGATATTGAAAAGTTTAC+CGG + chr4_1:48371088-48371107 None:intergenic 30.0%
! ACATCAAGTTTTTATTGGTG+TGG + chr4_1:48366459-48366478 None:intergenic 30.0%
ACCAATAAAAACTTGATGTG+TGG - chr4_1:48366460-48366479 Msa0551980:intron 30.0%
! TCCACACATCAAGTTTTTAT+TGG + chr4_1:48366464-48366483 None:intergenic 30.0%
ATAAAACAGCAAGAGATGAA+AGG - chr4_1:48366541-48366560 Msa0551980:intron 30.0%
! CTCATATCATTATAGTGGAA+TGG + chr4_1:48366641-48366660 None:intergenic 30.0%
!!! TCCTAATAGTGCTTTTTTCA+AGG - chr4_1:48366756-48366775 Msa0551980:intron 30.0%
!! ACCTTGAAAAAAGCACTATT+AGG + chr4_1:48366760-48366779 None:intergenic 30.0%
!! ATAAACCCTAGTTTGTTTGT+TGG - chr4_1:48366827-48366846 Msa0551980:intron 30.0%
AGAAACCAACAAACAAACTA+GGG + chr4_1:48371567-48371586 None:intergenic 30.0%
TAGAAACCAACAAACAAACT+AGG + chr4_1:48371568-48371587 None:intergenic 30.0%
TCACATAATCATCTGATACA+AGG - chr4_1:48371605-48371624 Msa0551980:intron 30.0%
GTGGAAGTTAACTTAAAATC+AGG + chr4_1:48367089-48367108 None:intergenic 30.0%
TATTCAATCATTTACAGGCT+TGG - chr4_1:48371911-48371930 Msa0551980:intron 30.0%
! ACACAAAGTATTACAGCATT+AGG + chr4_1:48371945-48371964 None:intergenic 30.0%
TCAAGGATTATATTATGCCT+TGG - chr4_1:48371992-48372011 Msa0551980:intron 30.0%
TTCTGTGATAAACCATTTGA+AGG - chr4_1:48372033-48372052 Msa0551980:intron 30.0%
TCTGTGATAAACCATTTGAA+GGG - chr4_1:48372034-48372053 Msa0551980:intron 30.0%
! AAAATTTGTTTAAGGGAACG+AGG + chr4_1:48372183-48372202 None:intergenic 30.0%
! TCGTTCCCTTAAACAAATTT+TGG - chr4_1:48372182-48372201 Msa0551980:intron 30.0%
CTCTCTATTTCAATATGTAC+CGG + chr4_1:48372671-48372690 None:intergenic 30.0%
ACATATTGAAATAGAGAGGA+AGG - chr4_1:48372673-48372692 Msa0551980:intron 30.0%
GAATTATTTATCACTCATGC+AGG - chr4_1:48372700-48372719 Msa0551980:intron 30.0%
AATTAGAGAATGACAAGTTC+AGG + chr4_1:48372946-48372965 None:intergenic 30.0%
! TCTAATTTTCTGTGTCATGT+AGG - chr4_1:48372959-48372978 Msa0551980:intron 30.0%
! TGTTTCTAAATTACTGTCAG+TGG - chr4_1:48373033-48373052 Msa0551980:intron 30.0%
AGAAAAGAAAATCCTTTCAC+AGG + chr4_1:48373104-48373123 None:intergenic 30.0%
CCATACGATAAAAGATATCA+CGG + chr4_1:48373229-48373248 None:intergenic 30.0%
! CGTGATATCTTTTATCGTAT+GGG - chr4_1:48373227-48373246 Msa0551980:intron 30.0%
!! TTTATTATTTGCTGTGATCG+TGG - chr4_1:48373318-48373337 Msa0551980:intron 30.0%
ATGAGTTATCAAACTTCAGA+GGG + chr4_1:48373428-48373447 None:intergenic 30.0%
TATGAGTTATCAAACTTCAG+AGG + chr4_1:48373429-48373448 None:intergenic 30.0%
!!! AGTTTTTTTGCTTTACTACG+AGG - chr4_1:48373484-48373503 Msa0551980:intron 30.0%
! TGTCAATATCAGGATACTTT+TGG - chr4_1:48373609-48373628 Msa0551980:intron 30.0%
! TATGAAATCAGTTTTCAGCA+GGG + chr4_1:48373766-48373785 None:intergenic 30.0%
! TTATGAAATCAGTTTTCAGC+AGG + chr4_1:48373767-48373786 None:intergenic 30.0%
! AAATGCAACAAGAGTACAAA+TGG + chr4_1:48373832-48373851 None:intergenic 30.0%
! TACTGGATCAATCTTTTGAT+TGG - chr4_1:48373855-48373874 Msa0551980:intron 30.0%
!! CATTAAGTAGGTTGATTAGT+AGG - chr4_1:48373887-48373906 Msa0551980:intron 30.0%
ATTTCCTACATGTGCTAATT+GGG - chr4_1:48373979-48373998 Msa0551980:intron 30.0%
! GAAAATTGGCATGAATGTTT+TGG + chr4_1:48374179-48374198 None:intergenic 30.0%
! CTCTTTGTATTGATGAGAAT+TGG - chr4_1:48374478-48374497 Msa0551980:intron 30.0%
TTCTATTGTTCATTCCAAGT+TGG + chr4_1:48374638-48374657 None:intergenic 30.0%
!!! TTGGTTGTTGACTTTACTTT+TGG + chr4_1:48374712-48374731 None:intergenic 30.0%
GTTTATCATGGTGCATTATT+TGG + chr4_1:48375212-48375231 None:intergenic 30.0%
ATCAGTTAACCAACAATATC+TGG - chr4_1:48375475-48375494 Msa0551980:intron 30.0%
!! CTCAAATTTGTTGAATGGTT+TGG + chr4_1:48375751-48375770 None:intergenic 30.0%
CAAACCATTCAACAAATTTG+AGG - chr4_1:48375749-48375768 Msa0551980:intron 30.0%
!! TAAGCCTCAAATTTGTTGAA+TGG + chr4_1:48375756-48375775 None:intergenic 30.0%
AACTACTTTACATTGATGTG+AGG + chr4_1:48375859-48375878 None:intergenic 30.0%
TGTTCGAATTCTTGATCAAT+CGG + chr4_1:48376466-48376485 None:intergenic 30.0%
ATTGAGCCAAAAATAACAGA+AGG - chr4_1:48376508-48376527 Msa0551980:intron 30.0%
AAATAACAGAAGGAAAAACG+CGG - chr4_1:48376518-48376537 Msa0551980:intron 30.0%
! TCAATTTTCCCAATTTCTTG+GGG + chr4_1:48376554-48376573 None:intergenic 30.0%
! GTCAATTTTCCCAATTTCTT+GGG + chr4_1:48376555-48376574 None:intergenic 30.0%
! TGTCAATTTTCCCAATTTCT+TGG + chr4_1:48376556-48376575 None:intergenic 30.0%
GAAAATTGACACGATAATGA+AGG - chr4_1:48376565-48376584 Msa0551980:intron 30.0%
GGTGAAAATCAATCAGAAAA+TGG - chr4_1:48376614-48376633 Msa0551980:intron 30.0%
CTGAAGAAAATGGATGAAAA+CGG - chr4_1:48376692-48376711 Msa0551980:intron 30.0%
TGAGGAAGAAAAGAAAATGA+AGG - chr4_1:48376716-48376735 Msa0551980:intron 30.0%
!! ATTTTCTCTAGAAAATGCAG+CGG - chr4_1:48376780-48376799 Msa0551980:intron 30.0%
TGATACCATGTTATGAAACA+TGG - chr4_1:48376836-48376855 Msa0551980:intron 30.0%
! CTCTTTGTATTGATGAGAAT+TGG - chr4_1:48374478-48374497 Msa0551980:intron 30.0%
TTGTATGAAACTCACAAAAG+AGG - chr4_1:48377101-48377120 Msa0551980:intron 30.0%
TGTATGAAACTCACAAAAGA+GGG - chr4_1:48377102-48377121 Msa0551980:intron 30.0%
GATACTAAGAAAACATAGAC+TGG + chr4_1:48377212-48377231 None:intergenic 30.0%
TTGCTACATTCTACATCTAT+TGG - chr4_1:48377242-48377261 Msa0551980:CDS 30.0%
TGCTACATTCTACATCTATT+GGG - chr4_1:48377243-48377262 Msa0551980:CDS 30.0%
GATCTTCAAGAGAAAGTAAA+TGG + chr4_1:48377353-48377372 None:intergenic 30.0%
! TTTTTCCTTCCTTCCGATTT+CGG - chr4_1:48365414-48365433 Msa0551980:three_prime_UTR 35.0%
CGAACATAAGAAACCGAAAT+CGG + chr4_1:48365430-48365449 None:intergenic 35.0%
!! CTTGTTTTCTTATGTCACAG+AGG - chr4_1:48365741-48365760 Msa0551980:intron 35.0%
! TGACTTTCAATTTTGTCTCG+AGG - chr4_1:48365908-48365927 Msa0551980:intron 35.0%
! GACTTTCAATTTTGTCTCGA+GGG - chr4_1:48365909-48365928 Msa0551980:intron 35.0%
ATGTTGGAAGTAGCAGAAAT+AGG + chr4_1:48365996-48366015 None:intergenic 35.0%
!! GGACAATTTAAGTTGCATGT+TGG + chr4_1:48366012-48366031 None:intergenic 35.0%
AACTGAATCTCATTGTTAGG+TGG - chr4_1:48366145-48366164 Msa0551980:intron 35.0%
TACCAAGCAATCAATTGAAG+CGG - chr4_1:48366493-48366512 Msa0551980:intron 35.0%
AAGAATCTGTTTACCCAGTT+CGG - chr4_1:48366578-48366597 Msa0551980:intron 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr4_1:48366746-48366765 None:intergenic 35.0%
GGGTTTATAGAGAATTCTCT+TGG + chr4_1:48366815-48366834 None:intergenic 35.0%
AGAAGCCAACAAACAAACTA+GGG + chr4_1:48366835-48366854 None:intergenic 35.0%
TAGAAGCCAACAAACAAACT+AGG + chr4_1:48366836-48366855 None:intergenic 35.0%
CCTTGTATCAGATGATTATG+TGG + chr4_1:48366876-48366895 None:intergenic 35.0%
CCACATAATCATCTGATACA+AGG - chr4_1:48366873-48366892 Msa0551980:intron 35.0%
!! TCATCACTGATTTGAAGTCA+AGG + chr4_1:48367121-48367140 None:intergenic 35.0%
! ATCAAGATTCAAGCATTGCT+TGG + chr4_1:48367216-48367235 None:intergenic 35.0%
CAATGCTTGAATCTTGATCT+TGG - chr4_1:48367218-48367237 Msa0551980:intron 35.0%
ATTCGTTTGCACTTTGTTAG+AGG + chr4_1:48367323-48367342 None:intergenic 35.0%
CATTCATTTGGCAAATCATC+AGG + chr4_1:48367375-48367394 None:intergenic 35.0%
! CTGATGATTTGCCAAATGAA+TGG - chr4_1:48367373-48367392 Msa0551980:intron 35.0%
AAGGTATGATTGGAGAATTG+GGG + chr4_1:48367442-48367461 None:intergenic 35.0%
! GAAAGGTATGATTGGAGAAT+TGG + chr4_1:48367444-48367463 None:intergenic 35.0%
GACACTAGAAAATCTTTGTC+TGG + chr4_1:48367593-48367612 None:intergenic 35.0%
TATTTGAATGGGACTTTGAC+AGG + chr4_1:48367695-48367714 None:intergenic 35.0%
!! GGGTTCTGAGATATTTGAAT+GGG + chr4_1:48367706-48367725 None:intergenic 35.0%
!! TGGGTTCTGAGATATTTGAA+TGG + chr4_1:48367707-48367726 None:intergenic 35.0%
! AAGTGTGATAAGTCGGTTTA+TGG + chr4_1:48367765-48367784 None:intergenic 35.0%
CTTATTGCATAGGATAAGTC+CGG - chr4_1:48367782-48367801 Msa0551980:intron 35.0%
!! CATCTTGCTTTTCTCTTCAT+CGG - chr4_1:48367865-48367884 Msa0551980:intron 35.0%
! AGAACAACTCACCTTTGTTT+CGG - chr4_1:48368005-48368024 Msa0551980:intron 35.0%
! GAATTTGAGATGAAGGATCT+TGG + chr4_1:48368070-48368089 None:intergenic 35.0%
GTTGTGTTTACATGATGAGA+AGG + chr4_1:48368195-48368214 None:intergenic 35.0%
GATGAGTTTCTTATAAAGGC+TGG + chr4_1:48368241-48368260 None:intergenic 35.0%
ATCTATATGCAACAACCAGA+AGG + chr4_1:48368352-48368371 None:intergenic 35.0%
! TGTAGCAAAAGGTTTTACTC+AGG + chr4_1:48368524-48368543 None:intergenic 35.0%
! AGAAGAAAGAAGGTATACCA+GGG + chr4_1:48368576-48368595 None:intergenic 35.0%
! AAGAAGAAAGAAGGTATACC+AGG + chr4_1:48368577-48368596 None:intergenic 35.0%
TGGGTGTTTAAGAAGAAAGA+AGG + chr4_1:48368586-48368605 None:intergenic 35.0%
ATGAAACAAGTTTCCAAGTC+TGG - chr4_1:48368638-48368657 Msa0551980:intron 35.0%
ATTAGAAAGCAACGAAAGCA+AGG + chr4_1:48368710-48368729 None:intergenic 35.0%
! AGTCAGGATCAATTGTTTCT+TGG - chr4_1:48368863-48368882 Msa0551980:intron 35.0%
AGAGAAAATTCAGTTTGAGG+TGG + chr4_1:48368950-48368969 None:intergenic 35.0%
GGTAGAGAAAATTCAGTTTG+AGG + chr4_1:48368953-48368972 None:intergenic 35.0%
!! ATTTTCATGGGTTATCCTGA+AGG + chr4_1:48369105-48369124 None:intergenic 35.0%
TTCAAATTAGAGTAGTCTGC+CGG - chr4_1:48369192-48369211 Msa0551980:intron 35.0%
TTAACAGATGTCCATCAACA+GGG + chr4_1:48369257-48369276 None:intergenic 35.0%
ATTAACAGATGTCCATCAAC+AGG + chr4_1:48369258-48369277 None:intergenic 35.0%
! AGCAGTTTAATGAGTTTTGC+AGG + chr4_1:48369446-48369465 None:intergenic 35.0%
!! AAAGTGTTGAGAACTGACAA+TGG + chr4_1:48369486-48369505 None:intergenic 35.0%
! TGATTATTCTGGAAGGGTAT+GGG + chr4_1:48369595-48369614 None:intergenic 35.0%
! ATGATTATTCTGGAAGGGTA+TGG + chr4_1:48369596-48369615 None:intergenic 35.0%
GCATCAGTTAAAACTCATAG+GGG + chr4_1:48369645-48369664 None:intergenic 35.0%
CAGCATCAGTTAAAACTCAT+AGG + chr4_1:48369647-48369666 None:intergenic 35.0%
!!! CTATGAGTTTTAACTGATGC+TGG - chr4_1:48369645-48369664 Msa0551980:intron 35.0%
TATGTTCATTCGGATCTTTG+GGG + chr4_1:48369672-48369691 None:intergenic 35.0%
GTATGTTCATTCGGATCTTT+GGG + chr4_1:48369673-48369692 None:intergenic 35.0%
AGTATGTTCATTCGGATCTT+TGG + chr4_1:48369674-48369693 None:intergenic 35.0%
TCCGAATGAACATACTCAAA+AGG - chr4_1:48369678-48369697 Msa0551980:intron 35.0%
!! GCCTTTTGAGTATGTTCATT+CGG + chr4_1:48369682-48369701 None:intergenic 35.0%
AACAACACAAGGTGAAGTTT+GGG + chr4_1:48369728-48369747 None:intergenic 35.0%
AAACAACACAAGGTGAAGTT+TGG + chr4_1:48369729-48369748 None:intergenic 35.0%
TTAGTTGAGCTAGCTAAACA+AGG + chr4_1:48369810-48369829 None:intergenic 35.0%
! AAACTGTGGCATTTAAGGTT+AGG + chr4_1:48369852-48369871 None:intergenic 35.0%
TTAGATGGTTCCACTGTTAT+AGG + chr4_1:48369915-48369934 None:intergenic 35.0%
! GCTAAAGGGTCTAAAATACA+TGG + chr4_1:48369948-48369967 None:intergenic 35.0%
GGTGCATTAGTTATAGCTAA+AGG + chr4_1:48369963-48369982 None:intergenic 35.0%
GGTATGATGAGAATTTCTCA+TGG + chr4_1:48369984-48370003 None:intergenic 35.0%
! ATAAGCATGTTTGATGGTCT+AGG + chr4_1:48370029-48370048 None:intergenic 35.0%
TATACCTCACATCCTTCAAA+AGG - chr4_1:48370078-48370097 Msa0551980:intron 35.0%
!! ATTTCCTTTTGAAGGATGTG+AGG + chr4_1:48370085-48370104 None:intergenic 35.0%
CATCCTTCAAAAGGAAATCA+CGG - chr4_1:48370087-48370106 Msa0551980:intron 35.0%
!! GGTCATCAAACATTTTGAGA+CGG - chr4_1:48370108-48370127 Msa0551980:intron 35.0%
GCTTGCAAAATTCAAGGTAT+GGG + chr4_1:48370140-48370159 None:intergenic 35.0%
!! TGCAAGCCTTATTATTACCA+AGG - chr4_1:48370153-48370172 Msa0551980:intron 35.0%
! TGTTCGCCTTGGTAATAATA+AGG + chr4_1:48370162-48370181 None:intergenic 35.0%
! GTTTCAAAGTACTCCTTTCT+CGG - chr4_1:48370206-48370225 Msa0551980:intron 35.0%
TTATCACATCTTTCCGAGAA+AGG + chr4_1:48370222-48370241 None:intergenic 35.0%
AGAAGTGAAAACAGAGGAAA+GGG + chr4_1:48370488-48370507 None:intergenic 35.0%
AAGAAGTGAAAACAGAGGAA+AGG + chr4_1:48370489-48370508 None:intergenic 35.0%
AACCTTCAACTCTTTGAACT+TGG - chr4_1:48370544-48370563 Msa0551980:intron 35.0%
ACTATGCTTTATGGCAAAGA+GGG + chr4_1:48370620-48370639 None:intergenic 35.0%
TACTATGCTTTATGGCAAAG+AGG + chr4_1:48370621-48370640 None:intergenic 35.0%
! TAGGTCCTTTGAGAATTTCA+AGG + chr4_1:48370645-48370664 None:intergenic 35.0%
TTGAAATTCTCAAAGGACCT+AGG - chr4_1:48370644-48370663 Msa0551980:intron 35.0%
TAAAGCACACAGTAGATGTA+AGG - chr4_1:48370667-48370686 Msa0551980:intron 35.0%
AGATGTAAATCTGGAAGATG+AGG + chr4_1:48370699-48370718 None:intergenic 35.0%
!! ACAACTCTACTTTTACCGAA+TGG + chr4_1:48370789-48370808 None:intergenic 35.0%
ATTATACATGACCAAGTCCT+TGG + chr4_1:48370834-48370853 None:intergenic 35.0%
TACCAAGCAATCAATTGAAG+CGG - chr4_1:48366493-48366512 Msa0551980:intron 35.0%
AAGAATCTGTTTACCCAGTT+CGG - chr4_1:48366578-48366597 Msa0551980:intron 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr4_1:48366746-48366765 None:intergenic 35.0%
GGGTTTATAGAGAATTCTCT+TGG + chr4_1:48366815-48366834 None:intergenic 35.0%
CACATACCCAAAGACAAAAA+GGG - chr4_1:48371878-48371897 Msa0551980:intron 35.0%
! AACCATCCCTTTTTGTCTTT+GGG + chr4_1:48371887-48371906 None:intergenic 35.0%
ATGCTGTAATACTTTGTGTG+AGG - chr4_1:48371946-48371965 Msa0551980:intron 35.0%
ATACTTTGTGTGAGGTTTCA+AGG - chr4_1:48371954-48371973 Msa0551980:intron 35.0%
! GGTTTTTGACAAAGTTGTCA+AGG - chr4_1:48371975-48371994 Msa0551980:intron 35.0%
! TTATGCCTTGGATTAGGATA+AGG - chr4_1:48372004-48372023 Msa0551980:intron 35.0%
AATCACCTTATCCTAATCCA+AGG + chr4_1:48372012-48372031 None:intergenic 35.0%
CTGTGATAAACCATTTGAAG+GGG - chr4_1:48372035-48372054 Msa0551980:intron 35.0%
TGTGATAAACCATTTGAAGG+GGG - chr4_1:48372036-48372055 Msa0551980:intron 35.0%
!!! ATTAGTTTTCCCCCTTCAAA+TGG + chr4_1:48372048-48372067 None:intergenic 35.0%
! CAGTGTCATTGAAATGATTG+AGG + chr4_1:48372218-48372237 None:intergenic 35.0%
! ATCACGTTTTTGCCTAAGAA+AGG + chr4_1:48372264-48372283 None:intergenic 35.0%
!! CTTGGTAGCTTTATGAAATC+TGG - chr4_1:48372301-48372320 Msa0551980:intron 35.0%
ATCAGAATCAAGACAGTGAT+CGG - chr4_1:48372611-48372630 Msa0551980:intron 35.0%
CGGTACATATTGAAATAGAG+AGG - chr4_1:48372669-48372688 Msa0551980:intron 35.0%
TATTGAAATAGAGAGGAAGG+AGG - chr4_1:48372676-48372695 Msa0551980:intron 35.0%
! TCAAAAGTATGTACCAGAGA+TGG - chr4_1:48372984-48373003 Msa0551980:intron 35.0%
! CAAAAGTATGTACCAGAGAT+GGG - chr4_1:48372985-48373004 Msa0551980:intron 35.0%
TACAACAGTTTCGTTCACTT+GGG - chr4_1:48373056-48373075 Msa0551980:intron 35.0%
AACATGTCAATGCTATTGGT+AGG - chr4_1:48373191-48373210 Msa0551980:intron 35.0%
! CCGTGATATCTTTTATCGTA+TGG - chr4_1:48373226-48373245 Msa0551980:intron 35.0%
AAAGATATTGTTGCACTGTC+TGG - chr4_1:48373260-48373279 Msa0551980:intron 35.0%
AAGATATTGTTGCACTGTCT+GGG - chr4_1:48373261-48373280 Msa0551980:intron 35.0%
TCAACATAACGGCAAAATTC+AGG + chr4_1:48373691-48373710 None:intergenic 35.0%
! ATAAAGTGTCCTGCCAAATA+TGG - chr4_1:48373783-48373802 Msa0551980:intron 35.0%
! TAAAGTGTCCTGCCAAATAT+GGG - chr4_1:48373784-48373803 Msa0551980:intron 35.0%
TGCTATTGGAAACCCATATT+TGG + chr4_1:48373799-48373818 None:intergenic 35.0%
CTCTTGTTGCATTTGTTTAC+TGG - chr4_1:48373838-48373857 Msa0551980:intron 35.0%
TGGAACTCATTGCATTAAGT+AGG - chr4_1:48373875-48373894 Msa0551980:intron 35.0%
GATTTCCTACATGTGCTAAT+TGG - chr4_1:48373978-48373997 Msa0551980:intron 35.0%
AGATATGAGCTCTTTCTACT+TGG - chr4_1:48374038-48374057 Msa0551980:intron 35.0%
AGACCAACGTATTAAGTAGT+TGG + chr4_1:48374064-48374083 None:intergenic 35.0%
TCTAATTCTAATTCTCCCTC+TGG - chr4_1:48374319-48374338 Msa0551980:intron 35.0%
CATAAGAAACTTTCAGAGCT+TGG - chr4_1:48374381-48374400 Msa0551980:intron 35.0%
AAGGCAACTGTTATGAAACA+TGG - chr4_1:48374420-48374439 Msa0551980:intron 35.0%
ATGATGAAGTTACCCACTAA+TGG - chr4_1:48374510-48374529 Msa0551980:intron 35.0%
TGATGAAGTTACCCACTAAT+GGG - chr4_1:48374511-48374530 Msa0551980:intron 35.0%
GAAAACATAAGGAGAAATGC+CGG - chr4_1:48374675-48374694 Msa0551980:intron 35.0%
!! CTACTTGTTGGATAGGTTTT+TGG + chr4_1:48374731-48374750 None:intergenic 35.0%
!! TTGTTGATATTGGCTTCTAC+CGG + chr4_1:48374817-48374836 None:intergenic 35.0%
!! TTGTTGCTTCATGGTACTTT+TGG + chr4_1:48374973-48374992 None:intergenic 35.0%
!! CACTTTTATCTTTGGAAGCT+TGG + chr4_1:48374998-48375017 None:intergenic 35.0%
!! GTGAGCATCACTTTTATCTT+TGG + chr4_1:48375006-48375025 None:intergenic 35.0%
!!! AGCATTGGTTTTTCTTGTCT+CGG + chr4_1:48375039-48375058 None:intergenic 35.0%
CAAGTTGTGTTTGCACAAAA+TGG + chr4_1:48375141-48375160 None:intergenic 35.0%
!! TGCATATTGACTTGTGTGAA+TGG + chr4_1:48375169-48375188 None:intergenic 35.0%
! CCTTGGTATTTGGTTTATCA+TGG + chr4_1:48375224-48375243 None:intergenic 35.0%
CCATGATAAACCAAATACCA+AGG - chr4_1:48375221-48375240 Msa0551980:intron 35.0%
! ATCAGTTTTACCCTTTATGG+AGG + chr4_1:48375320-48375339 None:intergenic 35.0%
! TGCATCAGTTTTACCCTTTA+TGG + chr4_1:48375323-48375342 None:intergenic 35.0%
GCAACTTCTACTCTAGTATT+TGG + chr4_1:48375346-48375365 None:intergenic 35.0%
TTCATGGAACTACCAACAAT+AGG - chr4_1:48375380-48375399 Msa0551980:intron 35.0%
TGTGTTCATTGACCTATTGT+TGG + chr4_1:48375395-48375414 None:intergenic 35.0%
TTGCTTATCACTTGAAGTTC+TGG + chr4_1:48375536-48375555 None:intergenic 35.0%
ATTGTGAGGTAATAGAGTTC+TGG + chr4_1:48375567-48375586 None:intergenic 35.0%
! ACATTCACTCATGATAGTGT+TGG + chr4_1:48375610-48375629 None:intergenic 35.0%
ATAACGATGCAGCAAACTTA+AGG - chr4_1:48375643-48375662 Msa0551980:intron 35.0%
TAACGATGCAGCAAACTTAA+GGG - chr4_1:48375644-48375663 Msa0551980:intron 35.0%
! TGTGATAATGAACTACTCAC+AGG - chr4_1:48375668-48375687 Msa0551980:intron 35.0%
!! ACAAAAAAGAAGTGCCTCAA+TGG - chr4_1:48375700-48375719 Msa0551980:intron 35.0%
ACCATCAATCACATTTGATG+AGG - chr4_1:48375993-48376012 Msa0551980:intron 35.0%
TCCTCATCAAATGTGATTGA+TGG + chr4_1:48375997-48376016 None:intergenic 35.0%
CACAATTCTTGTGCGATATT+CGG + chr4_1:48376027-48376046 None:intergenic 35.0%
!!! TGAATTTTTGGCACGAGTAT+GGG + chr4_1:48376167-48376186 None:intergenic 35.0%
!!! ATGAATTTTTGGCACGAGTA+TGG + chr4_1:48376168-48376187 None:intergenic 35.0%
GAGATCAAATCAAAGACGAT+CGG - chr4_1:48376323-48376342 Msa0551980:intron 35.0%
TTGTTCTTGCGATTGCAATT+CGG + chr4_1:48376406-48376425 None:intergenic 35.0%
TCTAATCCAGAAAACCGAAT+TGG - chr4_1:48376639-48376658 Msa0551980:intron 35.0%
! TAATTGCCAATTCGGTTTTC+TGG + chr4_1:48376648-48376667 None:intergenic 35.0%
!!! CATTTTCTTCAGCTTTGTTC+TGG + chr4_1:48376684-48376703 None:intergenic 35.0%
CAGAACAAAGCTGAAGAAAA+TGG - chr4_1:48376682-48376701 Msa0551980:intron 35.0%
AAAATGGATGAAAACGGTTG+AGG - chr4_1:48376698-48376717 Msa0551980:intron 35.0%
AAATTTGGTATCCTCCTTGA+AGG + chr4_1:48376812-48376831 None:intergenic 35.0%
ACATGGTATCAGAGCAAATT+TGG + chr4_1:48376827-48376846 None:intergenic 35.0%
ATGATGAAGTTACCCACTAA+TGG - chr4_1:48374510-48374529 Msa0551980:intron 35.0%
TGATGAAGTTACCCACTAAT+GGG - chr4_1:48374511-48374530 Msa0551980:intron 35.0%
GTTATGATGCTGCTCATAAT+TGG + chr4_1:48377302-48377321 None:intergenic 35.0%
TTTCTCTTGAAGATCGGAAA+AGG - chr4_1:48377358-48377377 Msa0551980:intron 35.0%
CGGAAGGAAGGAAAAAAACA+AGG + chr4_1:48365410-48365429 None:intergenic 40.0%
CATAAGAAACCGAAATCGGA+AGG + chr4_1:48365426-48365445 None:intergenic 40.0%
TATGATGCAAAGACCAAGAC+CGG - chr4_1:48365516-48365535 Msa0551980:three_prime_UTR 40.0%
AATAGAACCATTAGGTCCAC+CGG + chr4_1:48365538-48365557 None:intergenic 40.0%
! GTGGACCTAATGGTTCTATT+CGG - chr4_1:48365538-48365557 Msa0551980:three_prime_UTR 40.0%
TCGTTCCGAATAGAACCATT+AGG + chr4_1:48365546-48365565 None:intergenic 40.0%
! TAATGGTTCTATTCGGAACG+AGG - chr4_1:48365545-48365564 Msa0551980:three_prime_UTR 40.0%
! AACGAGGAAGAGTTTTCTCA+TGG - chr4_1:48365561-48365580 Msa0551980:three_prime_UTR 40.0%
TTATGTCACAGAGGAAGTCA+AGG - chr4_1:48365750-48365769 Msa0551980:intron 40.0%
AGGTCTGCATATGAGATCTT+AGG + chr4_1:48365784-48365803 None:intergenic 40.0%
CTCATATGCAGACCTTTATC+AGG - chr4_1:48365789-48365808 Msa0551980:intron 40.0%
!! CTTAGTTTTTCGTGCAGTGT+TGG - chr4_1:48366085-48366104 Msa0551980:intron 40.0%
! AGGGCACTAATCTAAGCAAA+GGG + chr4_1:48366205-48366224 None:intergenic 40.0%
GAAAGAGCTTGTGTGTAACA+GGG + chr4_1:48366224-48366243 None:intergenic 40.0%
TCGGAATTGTCATGCATCAT+GGG + chr4_1:48366249-48366268 None:intergenic 40.0%
TTCGGAATTGTCATGCATCA+TGG + chr4_1:48366250-48366269 None:intergenic 40.0%
!! AGAGATTGACTAGCTTTGCT+TGG - chr4_1:48366298-48366317 Msa0551980:intron 40.0%
AATTGTCTTCTACCCTGTTG+CGG - chr4_1:48366419-48366438 Msa0551980:intron 40.0%
ATCCGCTTCAATTGATTGCT+TGG + chr4_1:48366498-48366517 None:intergenic 40.0%
GTCTAATGATGACCTACTCT+GGG - chr4_1:48366600-48366619 Msa0551980:intron 40.0%
TCTAATGATGACCTACTCTG+GGG - chr4_1:48366601-48366620 Msa0551980:intron 40.0%
TTCTCTTGGCAACAACACTA+GGG + chr4_1:48366801-48366820 None:intergenic 40.0%
ATTCTCTTGGCAACAACACT+AGG + chr4_1:48366802-48366821 None:intergenic 40.0%
! ATTTTTCCAGTGCTTGCATC+AGG - chr4_1:48367012-48367031 Msa0551980:intron 40.0%
!! TCACTGATTTGAAGTCAAGG+TGG + chr4_1:48367118-48367137 None:intergenic 40.0%
GATTGAGACAAAGGAGATCA+TGG + chr4_1:48367297-48367316 None:intergenic 40.0%
! TAGAGGCATGATTGAGACAA+AGG + chr4_1:48367306-48367325 None:intergenic 40.0%
TTGCCAAATGAATGGCACTT+TGG - chr4_1:48367381-48367400 Msa0551980:intron 40.0%
! TAGCCAAAGTGCCATTCATT+TGG + chr4_1:48367387-48367406 None:intergenic 40.0%
!! GAGAATTGGGGATTAGTCAA+GGG + chr4_1:48367430-48367449 None:intergenic 40.0%
AAGGAAGCCATATGGTTGAA+AGG + chr4_1:48367461-48367480 None:intergenic 40.0%
AGTACATAGCCCTTGTTGAA+GGG + chr4_1:48367487-48367506 None:intergenic 40.0%
GTTTACTTTGTTCGGTACAG+CGG + chr4_1:48367564-48367583 None:intergenic 40.0%
TTTGGAAGGATATGTGGATG+CGG + chr4_1:48367633-48367652 None:intergenic 40.0%
AAGTATACAAGGTCACAACC+AGG + chr4_1:48367665-48367684 None:intergenic 40.0%
! TGGTATGGTTTGTAGTAGAC+CGG + chr4_1:48367804-48367823 None:intergenic 40.0%
!! TGGAAGCATCATGTATGGTA+TGG + chr4_1:48367819-48367838 None:intergenic 40.0%
GAAGAGAAAAGCAAGATGGA+GGG + chr4_1:48367863-48367882 None:intergenic 40.0%
TGAAGAGAAAAGCAAGATGG+AGG + chr4_1:48367864-48367883 None:intergenic 40.0%
CGATGAAGAGAAAAGCAAGA+TGG + chr4_1:48367867-48367886 None:intergenic 40.0%
! CTTTTCTCTTCATCGGATTG+AGG - chr4_1:48367872-48367891 Msa0551980:intron 40.0%
AACTTTGTGTGATGACCAAG+AGG - chr4_1:48367911-48367930 Msa0551980:intron 40.0%
AGTTGTTCTTATCTCAGCAG+GGG + chr4_1:48367994-48368013 None:intergenic 40.0%
GAGTTGTTCTTATCTCAGCA+GGG + chr4_1:48367995-48368014 None:intergenic 40.0%
TGAGTTGTTCTTATCTCAGC+AGG + chr4_1:48367996-48368015 None:intergenic 40.0%
ATCATAAGGGACCGAAACAA+AGG + chr4_1:48368019-48368038 None:intergenic 40.0%
TGCAAAGAGGATACTTGGTA+TGG + chr4_1:48368044-48368063 None:intergenic 40.0%
GGTAATGCAAAGAGGATACT+TGG + chr4_1:48368049-48368068 None:intergenic 40.0%
!! AGGATCTTGGTAATGCAAAG+AGG + chr4_1:48368057-48368076 None:intergenic 40.0%
TCATCTTCTACGAAACCTTC+TGG - chr4_1:48368334-48368353 Msa0551980:intron 40.0%
CAACTCTCCATGTAGAAATG+CGG - chr4_1:48368381-48368400 Msa0551980:CDS 40.0%
! CAATGAAATCTTTTCACCGG+TGG + chr4_1:48368485-48368504 None:intergenic 40.0%
! AAGGTTTTACTCAGGTGGAA+GGG + chr4_1:48368516-48368535 None:intergenic 40.0%
! AAAGGTTTTACTCAGGTGGA+AGG + chr4_1:48368517-48368536 None:intergenic 40.0%
! AGCAAAAGGTTTTACTCAGG+TGG + chr4_1:48368521-48368540 None:intergenic 40.0%
AAGGCAAGACTTGTAGCAAA+AGG + chr4_1:48368535-48368554 None:intergenic 40.0%
ACAAGTCTTGCCTTATACCT+TGG - chr4_1:48368541-48368560 Msa0551980:intron 40.0%
! GAAGAAAGAAGGTATACCAG+GGG + chr4_1:48368575-48368594 None:intergenic 40.0%
CCTAAGAATCAAAGGGTAGT+GGG + chr4_1:48368616-48368635 None:intergenic 40.0%
ACCTAAGAATCAAAGGGTAG+TGG + chr4_1:48368617-48368636 None:intergenic 40.0%
CATTGGAAAAGAACCAGACT+TGG + chr4_1:48368654-48368673 None:intergenic 40.0%
AATGCTTCCCTGAAGTTCTT+TGG - chr4_1:48368727-48368746 Msa0551980:intron 40.0%
AGCTGAAGAATTGCAAGACT+CGG + chr4_1:48368755-48368774 None:intergenic 40.0%
TCAGCATAACCGTATCTATC+AGG - chr4_1:48368799-48368818 Msa0551980:intron 40.0%
AGCTAGCAAGAGATAGGATA+AGG + chr4_1:48368840-48368859 None:intergenic 40.0%
ACTATCAGCTAGCAAGAGAT+AGG + chr4_1:48368846-48368865 None:intergenic 40.0%
AGGTTACAAACTGTGGAAGA+TGG + chr4_1:48369076-48369095 None:intergenic 40.0%
GTGTGAAAGGTTACAAACTG+TGG + chr4_1:48369083-48369102 None:intergenic 40.0%
TTGTAACCTTTCACACCTTC+AGG - chr4_1:48369087-48369106 Msa0551980:CDS 40.0%
GATAGATCTCAAGACACCTA+TGG + chr4_1:48369235-48369254 None:intergenic 40.0%
TTGAGATCTATCCCTGTTGA+TGG - chr4_1:48369243-48369262 Msa0551980:intron 40.0%
TGGATTGTCCAAGAGTTTCT+GGG + chr4_1:48369310-48369329 None:intergenic 40.0%
CGTGTGAGATGTATGTTGTT+GGG + chr4_1:48369336-48369355 None:intergenic 40.0%
AAGAATGAACAGGACCTTGT+TGG + chr4_1:48369361-48369380 None:intergenic 40.0%
GTCTTGCTGAAAGAATGAAC+AGG + chr4_1:48369371-48369390 None:intergenic 40.0%
! TATAAAGAGGCATAGAACCG+TGG + chr4_1:48369415-48369434 None:intergenic 40.0%
! AATGAGTTTTGCAGGAAACG+AGG + chr4_1:48369438-48369457 None:intergenic 40.0%
TCAGTTAAAACTCATAGGGG+AGG + chr4_1:48369642-48369661 None:intergenic 40.0%
TGGGTGTGCATAAATCTAGT+AGG + chr4_1:48369704-48369723 None:intergenic 40.0%
ACAACACAAGGTGAAGTTTG+GGG + chr4_1:48369727-48369746 None:intergenic 40.0%
CACATTAGGCAAACAACACA+AGG + chr4_1:48369739-48369758 None:intergenic 40.0%
! CTAGCTAAACAAGGTTTGCT+AGG + chr4_1:48369801-48369820 None:intergenic 40.0%
TTAGGTCATGTCAGTGAAAG+GGG + chr4_1:48369834-48369853 None:intergenic 40.0%
GTTAGGTCATGTCAGTGAAA+GGG + chr4_1:48369835-48369854 None:intergenic 40.0%
CTCTGGACATAACTAAACTG+TGG + chr4_1:48369866-48369885 None:intergenic 40.0%
CACTGTTATAGGTCATGCAT+CGG + chr4_1:48369904-48369923 None:intergenic 40.0%
! TGACCGTGATTTCCTTTTGA+AGG + chr4_1:48370093-48370112 None:intergenic 40.0%
GGCTTGCAAAATTCAAGGTA+TGG + chr4_1:48370141-48370160 None:intergenic 40.0%
!! GAAACTTTGGAGCTGAAAGA+AGG + chr4_1:48370191-48370210 None:intergenic 40.0%
CTCTTCACTTGCAATCTGAA+CGG - chr4_1:48370322-48370341 Msa0551980:intron 40.0%
TCACTTCAAGAAGGATTGTC+CGG + chr4_1:48370378-48370397 None:intergenic 40.0%
CAACTATGGTCACTTCAAGA+AGG + chr4_1:48370387-48370406 None:intergenic 40.0%
AGGTCAAAGTCTAGGTCAAA+GGG + chr4_1:48370449-48370468 None:intergenic 40.0%
AGAATTCCAGGTCAAAGTCT+AGG + chr4_1:48370457-48370476 None:intergenic 40.0%
GAAGTGAAAACAGAGGAAAG+GGG + chr4_1:48370487-48370506 None:intergenic 40.0%
AGAAGGCTTGAATGTCTCAA+GGG + chr4_1:48370513-48370532 None:intergenic 40.0%
!! AAGGTTGATGATAGTGGAGA+AGG + chr4_1:48370530-48370549 None:intergenic 40.0%
!! GAGTTGAAGGTTGATGATAG+TGG + chr4_1:48370536-48370555 None:intergenic 40.0%
GACCAAGTTCAAAGAGTTGA+AGG + chr4_1:48370549-48370568 None:intergenic 40.0%
ATCTACTGTGTGCTTTACCT+AGG + chr4_1:48370664-48370683 None:intergenic 40.0%
GGCGAACATAGATGTAAATC+TGG + chr4_1:48370708-48370727 None:intergenic 40.0%
! ACCTATAATGGAGCAACTGA+CGG + chr4_1:48370756-48370775 None:intergenic 40.0%
GGTGGAGTCAAAACCTATAA+TGG + chr4_1:48370768-48370787 None:intergenic 40.0%
!!! TAGGTTTTGACTCCACCATT+CGG - chr4_1:48370771-48370790 Msa0551980:intron 40.0%
!! ACTCTACTTTTACCGAATGG+TGG + chr4_1:48370786-48370805 None:intergenic 40.0%
AGTGCTATCATTCTGTGTCT+CGG + chr4_1:48370923-48370942 None:intergenic 40.0%
GACGGAGATGAATGATAAAG+CGG + chr4_1:48370948-48370967 None:intergenic 40.0%
GTTGTGGAAGGTAAAGATGA+GGG + chr4_1:48371050-48371069 None:intergenic 40.0%
TTTACCGGTAGTAACGACTT+CGG + chr4_1:48371073-48371092 None:intergenic 40.0%
AAGTATCATGGGTTCGAAGT+GGG + chr4_1:48371107-48371126 None:intergenic 40.0%
ATCCGCTTCAATTGATTGCT+TGG + chr4_1:48366498-48366517 None:intergenic 40.0%
GTCTAATGATGACCTACTCT+GGG - chr4_1:48366600-48366619 Msa0551980:intron 40.0%
TCTAATGATGACCTACTCTG+GGG - chr4_1:48366601-48366620 Msa0551980:intron 40.0%
TTCTCTTGGCAACAACACTA+GGG + chr4_1:48366801-48366820 None:intergenic 40.0%
ATTCTCTTGGCAACAACACT+AGG + chr4_1:48366802-48366821 None:intergenic 40.0%
! ATTTTTCCAGTGCTTGCATC+AGG - chr4_1:48367012-48367031 Msa0551980:intron 40.0%
! CCTTTTTGTCTTTGGGTATG+TGG + chr4_1:48371880-48371899 None:intergenic 40.0%
CCACATACCCAAAGACAAAA+AGG - chr4_1:48371877-48371896 Msa0551980:intron 40.0%
TACCCAAAGACAAAAAGGGA+TGG - chr4_1:48371882-48371901 Msa0551980:intron 40.0%
! CAACCATCCCTTTTTGTCTT+TGG + chr4_1:48371888-48371907 None:intergenic 40.0%
GTCATTGAAATGATTGAGGC+AGG + chr4_1:48372214-48372233 None:intergenic 40.0%
ACTACCAACAAGCCTTTCTT+AGG - chr4_1:48372249-48372268 Msa0551980:intron 40.0%
TTTGCCTAAGAAAGGCTTGT+TGG + chr4_1:48372256-48372275 None:intergenic 40.0%
TTGTTGCAGTTGAGGTTACT+GGG - chr4_1:48372844-48372863 Msa0551980:intron 40.0%
! AACACACCTTGTTTAGCATC+AGG + chr4_1:48373017-48373036 None:intergenic 40.0%
GTACAACAGTTTCGTTCACT+TGG - chr4_1:48373055-48373074 Msa0551980:intron 40.0%
AGATATTGTTGCACTGTCTG+GGG - chr4_1:48373262-48373281 Msa0551980:intron 40.0%
TGCTTAAACTTCCAACAGAC+AGG - chr4_1:48373650-48373669 Msa0551980:intron 40.0%
GCTTAAACTTCCAACAGACA+GGG - chr4_1:48373651-48373670 Msa0551980:intron 40.0%
TCGCATACAGCTCAACATAA+CGG + chr4_1:48373702-48373721 None:intergenic 40.0%
TTATGTTGAGCTGTATGCGA+AGG - chr4_1:48373702-48373721 Msa0551980:intron 40.0%
AGCTGTATGCGAAGGTAATT+GGG - chr4_1:48373710-48373729 Msa0551980:intron 40.0%
ATTGGAAACCCATATTTGGC+AGG + chr4_1:48373795-48373814 None:intergenic 40.0%
TCCAAAGCACAATGCTTACT+GGG + chr4_1:48373918-48373937 None:intergenic 40.0%
AACATCGTGATAATCGCAGA+TGG + chr4_1:48373952-48373971 None:intergenic 40.0%
TGGCCAACTACTTAATACGT+TGG - chr4_1:48374058-48374077 Msa0551980:intron 40.0%
!! TTGGCATGAATGTTTTGGGT+AGG + chr4_1:48374174-48374193 None:intergenic 40.0%
ATAACAGTTGCCTTTGAGCT+TGG + chr4_1:48374414-48374433 None:intergenic 40.0%
GTTATGAAACATGGCATCCA+TGG - chr4_1:48374429-48374448 Msa0551980:intron 40.0%
! CTTTTCCTTCTTTCCTTCCA+TGG + chr4_1:48374449-48374468 None:intergenic 40.0%
GATGAAGTTACCCACTAATG+GGG - chr4_1:48374512-48374531 Msa0551980:intron 40.0%
CTTGTAACTTCCCCATTAGT+GGG + chr4_1:48374525-48374544 None:intergenic 40.0%
TGTTCACAACACTTCCAACT+TGG - chr4_1:48374621-48374640 Msa0551980:intron 40.0%
GAGAAATGCCGGAAATACAT+CGG - chr4_1:48374686-48374705 Msa0551980:intron 40.0%
! ACTTTTGGCCGATGTATTTC+CGG + chr4_1:48374697-48374716 None:intergenic 40.0%
! GTGGTTTCTACTTGTTGGAT+AGG + chr4_1:48374738-48374757 None:intergenic 40.0%
GAGTTGTGGTTTCTACTTGT+TGG + chr4_1:48374743-48374762 None:intergenic 40.0%
CAAGTAGAAACCACAACTCA+AGG - chr4_1:48374744-48374763 Msa0551980:intron 40.0%
TTGATGCTTCATCCTTCAAG+CGG + chr4_1:48374775-48374794 None:intergenic 40.0%
!! GTTAAGCGTTGTGCCTTTTA+AGG + chr4_1:48374842-48374861 None:intergenic 40.0%
GAGTGATTGAACACTCTTGA+TGG + chr4_1:48374864-48374883 None:intergenic 40.0%
! CAAGACAAGAAAGAAGTGCA+AGG - chr4_1:48374896-48374915 Msa0551980:intron 40.0%
! TGCTTCATTCTTGGAAGCAT+TGG + chr4_1:48375054-48375073 None:intergenic 40.0%
!!! CTTTTGCTTGCTGTTCTGTT+TGG + chr4_1:48375106-48375125 None:intergenic 40.0%
!! ATTTGTCTTAAGCTTGCTGC+TGG + chr4_1:48375284-48375303 None:intergenic 40.0%
ACACAACTAAGCCTCCATAA+AGG - chr4_1:48375306-48375325 Msa0551980:intron 40.0%
CACAACTAAGCCTCCATAAA+GGG - chr4_1:48375307-48375326 Msa0551980:intron 40.0%
!! GTTGGTAGTTCCATGAAGTT+GGG + chr4_1:48375377-48375396 None:intergenic 40.0%
!! TGTTGGTAGTTCCATGAAGT+TGG + chr4_1:48375378-48375397 None:intergenic 40.0%
!! CCTCAGTTGGTACTTGTTAT+TGG + chr4_1:48375425-48375444 None:intergenic 40.0%
CCAATAACAAGTACCAACTG+AGG - chr4_1:48375422-48375441 Msa0551980:intron 40.0%
TAACAAGTACCAACTGAGGA+TGG - chr4_1:48375426-48375445 Msa0551980:intron 40.0%
! AACTGATTCAGAAACACTGC+TGG + chr4_1:48375462-48375481 None:intergenic 40.0%
TTTGAGCAGCCAGATATTGT+TGG + chr4_1:48375487-48375506 None:intergenic 40.0%
!! GAAGTTCTGGTGTTATAGTG+AGG + chr4_1:48375523-48375542 None:intergenic 40.0%
CTGAGACACAGTTTCTGATT+TGG + chr4_1:48375806-48375825 None:intergenic 40.0%
GTGGTTATGGTTTCTACCTT+CGG + chr4_1:48375832-48375851 None:intergenic 40.0%
TACATTGATGTGAGGAGTTG+TGG + chr4_1:48375851-48375870 None:intergenic 40.0%
! CACGTCAAAGATTTTGCTTC+TGG + chr4_1:48375900-48375919 None:intergenic 40.0%
!! ATTTGTGTTTGGTGTTGGTG+CGG + chr4_1:48375925-48375944 None:intergenic 40.0%
!! GACTCATTTGTGTTTGGTGT+TGG + chr4_1:48375930-48375949 None:intergenic 40.0%
ACCAAACACAAATGAGTCTG+AGG - chr4_1:48375932-48375951 Msa0551980:intron 40.0%
! CAAATGTGATTGATGGTCAG+AGG + chr4_1:48375990-48376009 None:intergenic 40.0%
AATTCTTGTGCGATATTCGG+TGG + chr4_1:48376024-48376043 None:intergenic 40.0%
! GTTTTCGTTGAGATTGTGTG+CGG + chr4_1:48376065-48376084 None:intergenic 40.0%
GAAGCTTCTCTGCATTCATT+TGG + chr4_1:48376115-48376134 None:intergenic 40.0%
GATGACAAATTGTGCTCACA+AGG + chr4_1:48376221-48376240 None:intergenic 40.0%
ATCACGAAACCCCAAGAAAT+TGG - chr4_1:48376542-48376561 Msa0551980:intron 40.0%
TCACGAAACCCCAAGAAATT+GGG - chr4_1:48376543-48376562 Msa0551980:intron 40.0%
GGATGCCATGTTTCATAACA+TGG + chr4_1:48374428-48374447 None:intergenic 40.0%
GTTATGAAACATGGCATCCA+TGG - chr4_1:48374429-48374448 Msa0551980:intron 40.0%
! CTTTTCCTTCTTTCCTTCCA+TGG + chr4_1:48374449-48374468 None:intergenic 40.0%
GATGAAGTTACCCACTAATG+GGG - chr4_1:48374512-48374531 Msa0551980:intron 40.0%
CTTGTAACTTCCCCATTAGT+GGG + chr4_1:48374525-48374544 None:intergenic 40.0%
GAGTTTCATACAAGTAACCG+AGG + chr4_1:48377094-48377113 None:intergenic 40.0%
AGACTTTGATCTGTTCAGCT+CGG - chr4_1:48377129-48377148 Msa0551980:intron 40.0%
AACCCAATACTGCTCGTTAT+GGG + chr4_1:48377176-48377195 None:intergenic 40.0%
AAACCCAATACTGCTCGTTA+TGG + chr4_1:48377177-48377196 None:intergenic 40.0%
TTACGCTAAGCGAAGCATGA+GGG + chr4_1:48365357-48365376 None:intergenic 45.0%
TCATGCTTCGCTTAGCGTAA+GGG - chr4_1:48365357-48365376 Msa0551980:three_prime_UTR 45.0%
AGAAACCGAAATCGGAAGGA+AGG + chr4_1:48365422-48365441 None:intergenic 45.0%
! CAGGGCACTAATCTAAGCAA+AGG + chr4_1:48366206-48366225 None:intergenic 45.0%
GGAAAGAGCTTGTGTGTAAC+AGG + chr4_1:48366225-48366244 None:intergenic 45.0%
GAATTGTCATGCATCATGGG+AGG + chr4_1:48366246-48366265 None:intergenic 45.0%
TTCACAACGAATCCGCAACA+GGG + chr4_1:48366434-48366453 None:intergenic 45.0%
TTTCACAACGAATCCGCAAC+AGG + chr4_1:48366435-48366454 None:intergenic 45.0%
GGTCATCATTAGACCGAACT+GGG + chr4_1:48366594-48366613 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG + chr4_1:48366595-48366614 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG - chr4_1:48366599-48366618 Msa0551980:intron 45.0%
CTAATGATGACCTACTCTGG+GGG - chr4_1:48366602-48366621 Msa0551980:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG + chr4_1:48366740-48366759 None:intergenic 45.0%
TTGGCAACAACACTAGGGTT+GGG + chr4_1:48366796-48366815 None:intergenic 45.0%
GAAGTCAAGGTGGAGAATTG+TGG + chr4_1:48367108-48367127 None:intergenic 45.0%
!! GATTTGGTGAACATGTCTGC+TGG - chr4_1:48367245-48367264 Msa0551980:intron 45.0%
! CATGGTGGAGAAAGTAGCAT+CGG + chr4_1:48367279-48367298 None:intergenic 45.0%
TGAGACAAAGGAGATCATGG+TGG + chr4_1:48367294-48367313 None:intergenic 45.0%
!! GGAGAATTGGGGATTAGTCA+AGG + chr4_1:48367431-48367450 None:intergenic 45.0%
TTCCTTGACCCCTTCAACAA+GGG - chr4_1:48367475-48367494 Msa0551980:intron 45.0%
GTACATAGCCCTTGTTGAAG+GGG + chr4_1:48367486-48367505 None:intergenic 45.0%
GAGTACATAGCCCTTGTTGA+AGG + chr4_1:48367488-48367507 None:intergenic 45.0%
!! GGATGCTTTGGAAGGATATG+TGG + chr4_1:48367639-48367658 None:intergenic 45.0%
TACAAGGTCACAACCAGGAA+GGG + chr4_1:48367660-48367679 None:intergenic 45.0%
ATACAAGGTCACAACCAGGA+AGG + chr4_1:48367661-48367680 None:intergenic 45.0%
! CAGGTGGTCTGAAGTATACA+AGG + chr4_1:48367676-48367695 None:intergenic 45.0%
TTGAATGGGACTTTGACAGG+TGG + chr4_1:48367692-48367711 None:intergenic 45.0%
! AAGTCGGTTTATGGCAAACC+CGG + chr4_1:48367756-48367775 None:intergenic 45.0%
! AGGGTACTTCCTATGCAAGT+GGG + chr4_1:48367844-48367863 None:intergenic 45.0%
AAAGTTGTTGGCACTCCTCT+TGG + chr4_1:48367929-48367948 None:intergenic 45.0%
! ACTTGAGGAAAGTGGTGGAA+CGG + chr4_1:48367970-48367989 None:intergenic 45.0%
! ATGGGTTGAAGCAAAGTCCA+AGG + chr4_1:48368282-48368301 None:intergenic 45.0%
CGCATTTCTACATGGAGAGT+TGG + chr4_1:48368383-48368402 None:intergenic 45.0%
GTGAAGACCGCATTTCTACA+TGG + chr4_1:48368391-48368410 None:intergenic 45.0%
CCCACTACCCTTTGATTCTT+AGG - chr4_1:48368613-48368632 Msa0551980:intron 45.0%
AAAGCAACGAAAGCAAGGAC+TGG + chr4_1:48368705-48368724 None:intergenic 45.0%
CTCGGAACCAAAGAACTTCA+GGG + chr4_1:48368737-48368756 None:intergenic 45.0%
ACTCGGAACCAAAGAACTTC+AGG + chr4_1:48368738-48368757 None:intergenic 45.0%
TCTCTTGCTAGCTGATAGTC+AGG - chr4_1:48368847-48368866 Msa0551980:intron 45.0%
CCAATACCTGATGAGAGTGA+AGG + chr4_1:48368889-48368908 None:intergenic 45.0%
CCTTCACTCTCATCAGGTAT+TGG - chr4_1:48368886-48368905 Msa0551980:intron 45.0%
TGGATACAAGCTCAGAAACG+GGG + chr4_1:48368975-48368994 None:intergenic 45.0%
CTGGATACAAGCTCAGAAAC+GGG + chr4_1:48368976-48368995 None:intergenic 45.0%
CCTGGATACAAGCTCAGAAA+CGG + chr4_1:48368977-48368996 None:intergenic 45.0%
! ACTTTTGATGAGACCCGCAT+GGG + chr4_1:48369015-48369034 None:intergenic 45.0%
! TACTTTTGATGAGACCCGCA+TGG + chr4_1:48369016-48369035 None:intergenic 45.0%
AAACTGTGGAAGATGGAACC+TGG + chr4_1:48369069-48369088 None:intergenic 45.0%
! GGTTATCCTGAAGGTGTGAA+AGG + chr4_1:48369096-48369115 None:intergenic 45.0%
AGCATTTGCTCATGTGAGAC+AGG + chr4_1:48369157-48369176 None:intergenic 45.0%
TCAAGACACCTATGGAGGTT+TGG + chr4_1:48369227-48369246 None:intergenic 45.0%
AGATCTCAAGACACCTATGG+AGG + chr4_1:48369232-48369251 None:intergenic 45.0%
GGATTGTCCAAGAGTTTCTG+GGG + chr4_1:48369309-48369328 None:intergenic 45.0%
CTGGATTGTCCAAGAGTTTC+TGG + chr4_1:48369311-48369330 None:intergenic 45.0%
AGATGTATGTTGTTGGGAGC+TGG + chr4_1:48369330-48369349 None:intergenic 45.0%
GCGTGTGAGATGTATGTTGT+TGG + chr4_1:48369337-48369356 None:intergenic 45.0%
TCAGCAAGACCATTCTGTTG+AGG - chr4_1:48369381-48369400 Msa0551980:CDS 45.0%
GCATACACACCTCAACAGAA+TGG + chr4_1:48369393-48369412 None:intergenic 45.0%
GCAGGAAACGAGGTATAAAG+AGG + chr4_1:48369428-48369447 None:intergenic 45.0%
!! ACTGCTCTGAAACAAACTCC+AGG - chr4_1:48369460-48369479 Msa0551980:intron 45.0%
GGTTAGGTCATGTCAGTGAA+AGG + chr4_1:48369836-48369855 None:intergenic 45.0%
CGATGCATGACCTATAACAG+TGG - chr4_1:48369902-48369921 Msa0551980:CDS 45.0%
!! ACTTTGGAGCTGAAAGAAGG+TGG + chr4_1:48370188-48370207 None:intergenic 45.0%
CAGATTGCAAGTGAAGAGGA+AGG + chr4_1:48370320-48370339 None:intergenic 45.0%
CGTTCAGATTGCAAGTGAAG+AGG + chr4_1:48370324-48370343 None:intergenic 45.0%
TCACTTGCAATCTGAACGGA+TGG - chr4_1:48370326-48370345 Msa0551980:intron 45.0%
CACTTGCAATCTGAACGGAT+GGG - chr4_1:48370327-48370346 Msa0551980:intron 45.0%
AAGGATTGTCCGGAGAGAAA+GGG + chr4_1:48370368-48370387 None:intergenic 45.0%
TCAAAGTCTAGGTCAAAGGG+TGG + chr4_1:48370446-48370465 None:intergenic 45.0%
CAGGTCAAAGTCTAGGTCAA+AGG + chr4_1:48370450-48370469 None:intergenic 45.0%
CTTTGACCTAGACTTTGACC+TGG - chr4_1:48370448-48370467 Msa0551980:intron 45.0%
GAAAACAGAGGAAAGGGGAA+AGG + chr4_1:48370482-48370501 None:intergenic 45.0%
AGGGGAAGAAGTGAAAACAG+AGG + chr4_1:48370494-48370513 None:intergenic 45.0%
GAAGGCTTGAATGTCTCAAG+GGG + chr4_1:48370512-48370531 None:intergenic 45.0%
GAGAAGGCTTGAATGTCTCA+AGG + chr4_1:48370514-48370533 None:intergenic 45.0%
!! CAAAGAGGGCACTATCACTT+TGG + chr4_1:48370606-48370625 None:intergenic 45.0%
TCCGTCAGTTGCTCCATTAT+AGG - chr4_1:48370752-48370771 Msa0551980:intron 45.0%
CAGACATTGTCTATGTGCCA+AGG - chr4_1:48370814-48370833 Msa0551980:intron 45.0%
TTGTCTATGTGCCAAGGACT+TGG - chr4_1:48370820-48370839 Msa0551980:intron 45.0%
AGACTACTGCTGTGTCTATG+TGG + chr4_1:48370871-48370890 None:intergenic 45.0%
CATTCTGTGTCTCGGTGATA+AGG + chr4_1:48370915-48370934 None:intergenic 45.0%
TTCATCTCCGTCTTCTCTAC+AGG - chr4_1:48370956-48370975 Msa0551980:intron 45.0%
TCTGACACCTGTAGAGAAGA+CGG + chr4_1:48370966-48370985 None:intergenic 45.0%
GGTTGTGGAAGGTAAAGATG+AGG + chr4_1:48371051-48371070 None:intergenic 45.0%
TTACCGGTAGTAACGACTTC+GGG + chr4_1:48371072-48371091 None:intergenic 45.0%
CAAGTATCATGGGTTCGAAG+TGG + chr4_1:48371108-48371127 None:intergenic 45.0%
CACTTCGAACCCATGATACT+TGG - chr4_1:48371106-48371125 Msa0551980:intron 45.0%
! TTGATTTGACCTTTGCCCCA+CGG - chr4_1:48371132-48371151 Msa0551980:intron 45.0%
CACAACGAATCCGCAACAAT+TGG + chr4_1:48371164-48371183 None:intergenic 45.0%
GGTCATCATTAGACCGAACT+GGG + chr4_1:48366594-48366613 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG + chr4_1:48366595-48366614 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG - chr4_1:48366599-48366618 Msa0551980:intron 45.0%
CTAATGATGACCTACTCTGG+GGG - chr4_1:48366602-48366621 Msa0551980:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG + chr4_1:48366740-48366759 None:intergenic 45.0%
TTGGCAACAACACTAGGGTT+GGG + chr4_1:48366796-48366815 None:intergenic 45.0%
!! GCTTGTTGGTAGTATGAAGC+AGG + chr4_1:48372242-48372261 None:intergenic 45.0%
CATGTAATCTATGTCGCAGC+TGG + chr4_1:48372774-48372793 None:intergenic 45.0%
GTTGTTGCAGTTGAGGTTAC+TGG - chr4_1:48372843-48372862 Msa0551980:intron 45.0%
TGTTGCAGTTGAGGTTACTG+GGG - chr4_1:48372845-48372864 Msa0551980:intron 45.0%
TCAACTTTGTTCCCGGAAGA+AGG - chr4_1:48372877-48372896 Msa0551980:intron 45.0%
CAACTTTGTTCCCGGAAGAA+GGG - chr4_1:48372878-48372897 Msa0551980:intron 45.0%
TGCACAACATACCCTTCTTC+CGG + chr4_1:48372892-48372911 None:intergenic 45.0%
AAGTATGTACCAGAGATGGG+CGG - chr4_1:48372988-48373007 Msa0551980:intron 45.0%
GAAAATCCTTTCACAGGCAG+TGG + chr4_1:48373098-48373117 None:intergenic 45.0%
! TCCAACAGACAGGGCTTTAT+TGG - chr4_1:48373660-48373679 Msa0551980:intron 45.0%
TCCAATAAAGCCCTGTCTGT+TGG + chr4_1:48373664-48373683 None:intergenic 45.0%
GAGCTGTATGCGAAGGTAAT+TGG - chr4_1:48373709-48373728 Msa0551980:intron 45.0%
AAGCACAATGCTTACTGGGA+AGG + chr4_1:48373914-48373933 None:intergenic 45.0%
! TCCCAGTAAGCATTGTGCTT+TGG - chr4_1:48373914-48373933 Msa0551980:intron 45.0%
CTCCAAAGCACAATGCTTAC+TGG + chr4_1:48373919-48373938 None:intergenic 45.0%
TCCTACATGTGCTAATTGGG+TGG - chr4_1:48373982-48374001 Msa0551980:intron 45.0%
TCCACCCAATTAGCACATGT+AGG + chr4_1:48373986-48374005 None:intergenic 45.0%
ATTCTAATTCTCCCTCTGGC+AGG - chr4_1:48374323-48374342 Msa0551980:intron 45.0%
TGAAACATGGCATCCATGGA+AGG - chr4_1:48374433-48374452 Msa0551980:intron 45.0%
GCTTGTAACTTCCCCATTAG+TGG + chr4_1:48374526-48374545 None:intergenic 45.0%
TGAACACCTTCCAACTTGTG+GGG + chr4_1:48374607-48374626 None:intergenic 45.0%
GTGAACACCTTCCAACTTGT+GGG + chr4_1:48374608-48374627 None:intergenic 45.0%
TGTGAACACCTTCCAACTTG+TGG + chr4_1:48374609-48374628 None:intergenic 45.0%
! AGCGGTTAAACCTTGAGTTG+TGG + chr4_1:48374757-48374776 None:intergenic 45.0%
CTCAAGGTTTAACCGCTTGA+AGG - chr4_1:48374760-48374779 Msa0551980:intron 45.0%
!! TGATATTGGCTTCTACCGGA+TGG + chr4_1:48374813-48374832 None:intergenic 45.0%
GGAAGAGCCATAGTCTACAA+TGG - chr4_1:48374917-48374936 Msa0551980:intron 45.0%
GAGCCATAGTCTACAATGGA+AGG - chr4_1:48374921-48374940 Msa0551980:intron 45.0%
CCTCCTTCCATTGTAGACTA+TGG + chr4_1:48374927-48374946 None:intergenic 45.0%
CCATAGTCTACAATGGAAGG+AGG - chr4_1:48374924-48374943 Msa0551980:intron 45.0%
!! AGCTTGGTCTTGTTGCTTCA+TGG + chr4_1:48374982-48375001 None:intergenic 45.0%
! TGGTTTTTCTTGTCTCGGCT+TGG + chr4_1:48375034-48375053 None:intergenic 45.0%
GCTCATAGTGCCTTGGTATT+TGG + chr4_1:48375234-48375253 None:intergenic 45.0%
CATGTTATGCCATCCTCAGT+TGG + chr4_1:48375438-48375457 None:intergenic 45.0%
GATGTGAGGAGTTGTGGTTA+TGG + chr4_1:48375845-48375864 None:intergenic 45.0%
!! GCTTCTGGTTCATTCTTCCT+TGG + chr4_1:48375885-48375904 None:intergenic 45.0%
GCCTCAGACTCATTTGTGTT+TGG + chr4_1:48375936-48375955 None:intergenic 45.0%
GACTTCGACATTGTCAACTG+CGG + chr4_1:48376087-48376106 None:intergenic 45.0%
ATTCGTATCTGAACTGAGGG+AGG + chr4_1:48376265-48376284 None:intergenic 45.0%
CGGATTCGTATCTGAACTGA+GGG + chr4_1:48376268-48376287 None:intergenic 45.0%
ACGGATTCGTATCTGAACTG+AGG + chr4_1:48376269-48376288 None:intergenic 45.0%
GAGCAAGAAACTCGAATCGA+AGG - chr4_1:48376593-48376612 Msa0551980:intron 45.0%
TGCAGCGGAAAAATCCTTCA+AGG - chr4_1:48376795-48376814 Msa0551980:intron 45.0%
AGCGGAAAAATCCTTCAAGG+AGG - chr4_1:48376798-48376817 Msa0551980:intron 45.0%
TGAAACATGGCATCCATGGA+AGG - chr4_1:48374433-48374452 Msa0551980:intron 45.0%
GCTTGTAACTTCCCCATTAG+TGG + chr4_1:48374526-48374545 None:intergenic 45.0%
!! AAAAGCGCTTTGTGCCAGTA+CGG + chr4_1:48377042-48377061 None:intergenic 45.0%
TTTGATCTGTTCAGCTCGGT+TGG - chr4_1:48377133-48377152 Msa0551980:intron 45.0%
CTCTTGAAGATCGGAAAAGG+AGG - chr4_1:48377361-48377380 Msa0551980:intron 45.0%
TTCTGTTGGCGATGAGAGCA+CGG + chr4_1:48365325-48365344 None:intergenic 50.0%
TACGCTAAGCGAAGCATGAG+GGG + chr4_1:48365356-48365375 None:intergenic 50.0%
CTTACGCTAAGCGAAGCATG+AGG + chr4_1:48365358-48365377 None:intergenic 50.0%
CTCATGCTTCGCTTAGCGTA+AGG - chr4_1:48365356-48365375 Msa0551980:three_prime_UTR 50.0%
!!! GTTTTTCGTGCAGTGTTGGC+TGG - chr4_1:48366089-48366108 Msa0551980:intron 50.0%
GGATTGAGTCTCTTGGTCAC+GGG + chr4_1:48366739-48366758 None:intergenic 50.0%
CTTGGCAACAACACTAGGGT+TGG + chr4_1:48366797-48366816 None:intergenic 50.0%
CTGGAAAAATCGTGCCACGA+TGG + chr4_1:48367002-48367021 None:intergenic 50.0%
GATCTGCTTTCAACCCATCG+TGG - chr4_1:48367034-48367053 Msa0551980:intron 50.0%
GAGAGCAGCAAGGTGATTGA+TGG + chr4_1:48367155-48367174 None:intergenic 50.0%
AAGGGGTCAAGGAAGCCATA+TGG + chr4_1:48367469-48367488 None:intergenic 50.0%
CTTCCTTGACCCCTTCAACA+AGG - chr4_1:48367474-48367493 Msa0551980:intron 50.0%
TGTTCGGTACAGCGGTAACT+TGG + chr4_1:48367556-48367575 None:intergenic 50.0%
ACAACCAGGAAGGGATGCTT+TGG + chr4_1:48367651-48367670 None:intergenic 50.0%
! GCACTGGCAAGCTTTGATGT+GGG + chr4_1:48367726-48367745 None:intergenic 50.0%
! TGCACTGGCAAGCTTTGATG+TGG + chr4_1:48367727-48367746 None:intergenic 50.0%
! AGTCGGTTTATGGCAAACCC+GGG + chr4_1:48367755-48367774 None:intergenic 50.0%
!! GGGGTTGGAAGCATCATGTA+TGG + chr4_1:48367824-48367843 None:intergenic 50.0%
ACTTCCTATGCAAGTGGGGT+TGG + chr4_1:48367839-48367858 None:intergenic 50.0%
GGGTACTTCCTATGCAAGTG+GGG + chr4_1:48367843-48367862 None:intergenic 50.0%
!! GAGGGTACTTCCTATGCAAG+TGG + chr4_1:48367845-48367864 None:intergenic 50.0%
!! TATCTCAGCAGGGGTACTTG+AGG + chr4_1:48367985-48368004 None:intergenic 50.0%
TGAAGCAAAGTCCAAGGCAG+TGG + chr4_1:48368276-48368295 None:intergenic 50.0%
! GGTCGAAGCACCAAGGTATA+AGG + chr4_1:48368554-48368573 None:intergenic 50.0%
!! AAGGGTAGTGGGAAGCAAGT+GGG + chr4_1:48368605-48368624 None:intergenic 50.0%
!! AAAGGGTAGTGGGAAGCAAG+TGG + chr4_1:48368606-48368625 None:intergenic 50.0%
CTGGCTGAAGGCAATGAATG+AGG + chr4_1:48368686-48368705 None:intergenic 50.0%
! TCTTGGCCTTCACTCTCATC+AGG - chr4_1:48368880-48368899 Msa0551980:intron 50.0%
TACCACGGATGAAAGGGAAG+AGG + chr4_1:48368923-48368942 None:intergenic 50.0%
TCTTCCCTTTCATCCGTGGT+AGG - chr4_1:48368922-48368941 Msa0551980:intron 50.0%
GGATACAAGCTCAGAAACGG+GGG + chr4_1:48368974-48368993 None:intergenic 50.0%
CCGTTTCTGAGCTTGTATCC+AGG - chr4_1:48368974-48368993 Msa0551980:intron 50.0%
! CTTTTGATGAGACCCGCATG+GGG + chr4_1:48369014-48369033 None:intergenic 50.0%
! CACCTATGGAGGTTTGGAGT+GGG + chr4_1:48369221-48369240 None:intergenic 50.0%
ACACCTATGGAGGTTTGGAG+TGG + chr4_1:48369222-48369241 None:intergenic 50.0%
AGCTTCTCCCCAGAAACTCT+TGG - chr4_1:48369299-48369318 Msa0551980:intron 50.0%
ACATCTCACACGCTCCAACA+AGG - chr4_1:48369344-48369363 Msa0551980:CDS 50.0%
CTGTTGAGGTGTGTATGCCA+CGG - chr4_1:48369395-48369414 Msa0551980:intron 50.0%
GTTGAGAACTGACAATGGCC+TGG + chr4_1:48369481-48369500 None:intergenic 50.0%
! CACAAGGTGAAGTTTGGGGT+GGG + chr4_1:48369723-48369742 None:intergenic 50.0%
ACACAAGGTGAAGTTTGGGG+TGG + chr4_1:48369724-48369743 None:intergenic 50.0%
GGTTGCTAGTGTAGACACTC+TGG + chr4_1:48369883-48369902 None:intergenic 50.0%
! GAGGAAGGTTATGAGAGTGC+TGG + chr4_1:48370305-48370324 None:intergenic 50.0%
GAGAGAAAGGGCAATGGAAG+TGG + chr4_1:48370356-48370375 None:intergenic 50.0%
CTTCCATTGCCCTTTCTCTC+CGG - chr4_1:48370356-48370375 Msa0551980:intron 50.0%
GAAGGATTGTCCGGAGAGAA+AGG + chr4_1:48370369-48370388 None:intergenic 50.0%
AGGGGAAAGGCAAGAATTCC+AGG + chr4_1:48370469-48370488 None:intergenic 50.0%
!! AGAGGGCACTATCACTTTGG+AGG + chr4_1:48370603-48370622 None:intergenic 50.0%
! GGTGTTGAGAGAGGTAGCAA+GGG + chr4_1:48370894-48370913 None:intergenic 50.0%
!! AGGTGTTGAGAGAGGTAGCA+AGG + chr4_1:48370895-48370914 None:intergenic 50.0%
!! CGGTGATAAGGTGTTGAGAG+AGG + chr4_1:48370903-48370922 None:intergenic 50.0%
!! TAACGACTTCGGGTTGTGGA+AGG + chr4_1:48371062-48371081 None:intergenic 50.0%
!! GTAGTAACGACTTCGGGTTG+TGG + chr4_1:48371066-48371085 None:intergenic 50.0%
CAACCCGAAGTCGTTACTAC+CGG - chr4_1:48371066-48371085 Msa0551980:intron 50.0%
GGATTGAGTCTCTTGGTCAC+GGG + chr4_1:48366739-48366758 None:intergenic 50.0%
CTTGGCAACAACACTAGGGT+TGG + chr4_1:48366797-48366816 None:intergenic 50.0%
CTGGAAAAATCGTGCCACGA+TGG + chr4_1:48367002-48367021 None:intergenic 50.0%
GATCTGCTTTCAACCCATCG+TGG - chr4_1:48367034-48367053 Msa0551980:intron 50.0%
! CAAGCTGGAAGCACAAAGGA+AGG + chr4_1:48372818-48372837 None:intergenic 50.0%
TCCTTTGTGCTTCCAGCTTG+CGG - chr4_1:48372818-48372837 Msa0551980:intron 50.0%
GTTGCAGTTGAGGTTACTGG+GGG - chr4_1:48372846-48372865 Msa0551980:intron 50.0%
CCGGGAACAAAGTTGACTGT+GGG + chr4_1:48372873-48372892 None:intergenic 50.0%
CCCACAGTCAACTTTGTTCC+CGG - chr4_1:48372870-48372889 Msa0551980:intron 50.0%
TCCGGGAACAAAGTTGACTG+TGG + chr4_1:48372874-48372893 None:intergenic 50.0%
GCACAACATACCCTTCTTCC+GGG + chr4_1:48372891-48372910 None:intergenic 50.0%
CGGCTTCCTGATGCTAAACA+AGG - chr4_1:48373008-48373027 Msa0551980:intron 50.0%
CAGTTTCGTTCACTTGGGCA+TGG - chr4_1:48373061-48373080 Msa0551980:intron 50.0%
AGCTTACCACTGCCTGTGAA+AGG - chr4_1:48373089-48373108 Msa0551980:intron 50.0%
AGAGCACATCCAGAGAGATC+CGG - chr4_1:48373378-48373397 Msa0551980:intron 50.0%
GGCATCCATGGAAGGAAAGA+AGG - chr4_1:48374441-48374460 Msa0551980:intron 50.0%
TCCAATAGTCCCCCACAAGT+TGG - chr4_1:48374594-48374613 Msa0551980:intron 50.0%
TCCAACTTGTGGGGGACTAT+TGG + chr4_1:48374598-48374617 None:intergenic 50.0%
! ATAGTCCCCCACAAGTTGGA+AGG - chr4_1:48374598-48374617 Msa0551980:intron 50.0%
GAACACCTTCCAACTTGTGG+GGG + chr4_1:48374606-48374625 None:intergenic 50.0%
AGCAACGCTTAACCACCATC+CGG - chr4_1:48374795-48374814 Msa0551980:intron 50.0%
!! TATTGGCTTCTACCGGATGG+TGG + chr4_1:48374810-48374829 None:intergenic 50.0%
!! TTCTTGTCTCGGCTTGGCAT+AGG + chr4_1:48375028-48375047 None:intergenic 50.0%
CCTTTCAGCTCATAGTGCCT+TGG + chr4_1:48375241-48375260 None:intergenic 50.0%
! CCAAGGCACTATGAGCTGAA+AGG - chr4_1:48375238-48375257 Msa0551980:intron 50.0%
GCTATGTGTGCCCAACTTCA+TGG - chr4_1:48375364-48375383 Msa0551980:intron 50.0%
AACTGTGTCTCAGAAGCCGA+AGG - chr4_1:48375813-48375832 Msa0551980:intron 50.0%
CAGTTCTCTGTTCTGCACTC+TGG + chr4_1:48376363-48376382 None:intergenic 50.0%
GGCATCCATGGAAGGAAAGA+AGG - chr4_1:48374441-48374460 Msa0551980:intron 50.0%
TCCAATAGCAACTGCTCCTG+TGG - chr4_1:48377010-48377029 Msa0551980:intron 50.0%
TCCACAGGAGCAGTTGCTAT+TGG + chr4_1:48377014-48377033 None:intergenic 50.0%
!! GTACTGGCACAAAGCGCTTT+TGG - chr4_1:48377041-48377060 Msa0551980:intron 50.0%
TGGCCCATAACGAGCAGTAT+TGG - chr4_1:48377170-48377189 Msa0551980:CDS 50.0%
GGCCCATAACGAGCAGTATT+GGG - chr4_1:48377171-48377190 Msa0551980:CDS 50.0%
! GAGGGGAGCACAGTTTCTGT+TGG + chr4_1:48365339-48365358 None:intergenic 55.0%
TGATTCAGGTGGCACGATGC+TGG - chr4_1:48365489-48365508 Msa0551980:three_prime_UTR 55.0%
GATGCAAAGACCAAGACCGG+TGG - chr4_1:48365519-48365538 Msa0551980:three_prime_UTR 55.0%
ACCAAGACCGGTGGACCTAA+TGG - chr4_1:48365528-48365547 Msa0551980:three_prime_UTR 55.0%
ACCATTAGGTCCACCGGTCT+TGG + chr4_1:48365532-48365551 None:intergenic 55.0%
CTGGGACTGAGGGTAGAGTT+AGG + chr4_1:48366710-48366729 None:intergenic 55.0%
AGTCTCTTGGTCACGGGAAG+AGG + chr4_1:48366733-48366752 None:intergenic 55.0%
GGAATCGTAACGTGGCACGA+TGG + chr4_1:48366981-48367000 None:intergenic 55.0%
GCCACGTTACGATTCCATCG+TGG - chr4_1:48366985-48367004 Msa0551980:intron 55.0%
GCCACGATGGAATCGTAACG+TGG + chr4_1:48366989-48367008 None:intergenic 55.0%
GCAGATCCTGATGCAAGCAC+TGG + chr4_1:48367021-48367040 None:intergenic 55.0%
CAGAAGCAACGTGCCACGAT+GGG + chr4_1:48367050-48367069 None:intergenic 55.0%
TCAGAAGCAACGTGCCACGA+TGG + chr4_1:48367051-48367070 None:intergenic 55.0%
TGGCACGTTGCTTCTGATCG+TGG - chr4_1:48367054-48367073 Msa0551980:intron 55.0%
GAAGGTTGGAGAGAGCAGCA+AGG + chr4_1:48367165-48367184 None:intergenic 55.0%
AGCCCTTGTTGAAGGGGTCA+AGG + chr4_1:48367480-48367499 None:intergenic 55.0%
CGGTACAGCGGTAACTTGGA+AGG + chr4_1:48367552-48367571 None:intergenic 55.0%
! CCAGGAAGGGATGCTTTGGA+AGG + chr4_1:48367647-48367666 None:intergenic 55.0%
! CCTTCCAAAGCATCCCTTCC+TGG - chr4_1:48367644-48367663 Msa0551980:intron 55.0%
GCTTCCAACCCCACTTGCAT+AGG - chr4_1:48367832-48367851 Msa0551980:intron 55.0%
! GGGGTACTTGAGGAAAGTGG+TGG + chr4_1:48367975-48367994 None:intergenic 55.0%
!! GCAGGGGTACTTGAGGAAAG+TGG + chr4_1:48367978-48367997 None:intergenic 55.0%
AACCGACGATACCACTGCCT+TGG - chr4_1:48368262-48368281 Msa0551980:intron 55.0%
GTCCAAGGCAGTGGTATCGT+CGG + chr4_1:48368267-48368286 None:intergenic 55.0%
!! CGAAAGCAAGGACTGGCTGA+AGG + chr4_1:48368698-48368717 None:intergenic 55.0%
CACGGATGAAAGGGAAGAGG+AGG + chr4_1:48368920-48368939 None:intergenic 55.0%
CTCCTCTTCCCTTTCATCCG+TGG - chr4_1:48368918-48368937 Msa0551980:intron 55.0%
GGAGCCTACCACGGATGAAA+GGG + chr4_1:48368929-48368948 None:intergenic 55.0%
TGGAGCCTACCACGGATGAA+AGG + chr4_1:48368930-48368949 None:intergenic 55.0%
! GTTTGAGGTGGAGCCTACCA+CGG + chr4_1:48368938-48368957 None:intergenic 55.0%
CTTTGCACTTCAGCCCCATG+CGG - chr4_1:48368998-48369017 Msa0551980:intron 55.0%
TTTGCACTTCAGCCCCATGC+GGG - chr4_1:48368999-48369018 Msa0551980:intron 55.0%
CTGTGGAAGATGGAACCTGG+AGG + chr4_1:48369066-48369085 None:intergenic 55.0%
CTCCCACTCCAAACCTCCAT+AGG - chr4_1:48369216-48369235 Msa0551980:intron 55.0%
GAAGGTGGAGTTGTTCGCCT+TGG + chr4_1:48370173-48370192 None:intergenic 55.0%
! TCCAAGACCCAGCCCTTTTC+AGG - chr4_1:48370254-48370273 Msa0551980:intron 55.0%
ACCTGAAAAGGGCTGGGTCT+TGG + chr4_1:48370258-48370277 None:intergenic 55.0%
TGTCCGGAGAGAAAGGGCAA+TGG + chr4_1:48370362-48370381 None:intergenic 55.0%
TCTACAGGTGTCAGATGCGC+AGG - chr4_1:48370971-48370990 Msa0551980:intron 55.0%
ATTTGACCTTTGCCCCACGG+TGG - chr4_1:48371135-48371154 Msa0551980:intron 55.0%
TTTGACCTTTGCCCCACGGT+GGG - chr4_1:48371136-48371155 Msa0551980:intron 55.0%
CTGGGACTGAGGGTAGAGTT+AGG + chr4_1:48366710-48366729 None:intergenic 55.0%
AGTCTCTTGGTCACGGGAAG+AGG + chr4_1:48366733-48366752 None:intergenic 55.0%
GGAATCGTAACGTGGCACGA+TGG + chr4_1:48366981-48367000 None:intergenic 55.0%
GCCACGTTACGATTCCATCG+TGG - chr4_1:48366985-48367004 Msa0551980:intron 55.0%
GCCACGATGGAATCGTAACG+TGG + chr4_1:48366989-48367008 None:intergenic 55.0%
GCAGATCCTGATGCAAGCAC+TGG + chr4_1:48367021-48367040 None:intergenic 55.0%
TGGAAGCAACGTGCCACGAT+GGG + chr4_1:48371782-48371801 None:intergenic 55.0%
TTGGAAGCAACGTGCCACGA+TGG + chr4_1:48371783-48371802 None:intergenic 55.0%
TGGCACGTTGCTTCCAATCG+TGG - chr4_1:48371786-48371805 Msa0551980:intron 55.0%
GGAGAGAAACGTGCCACGAT+TGG + chr4_1:48371802-48371821 None:intergenic 55.0%
TGGCACGTTTCTCTCCATCG+TGG - chr4_1:48371806-48371825 Msa0551980:intron 55.0%
TCAGAAGCAACGTGCCACGA+TGG + chr4_1:48367051-48367070 None:intergenic 55.0%
TGGCACGTTGCTTCTGATCG+TGG - chr4_1:48367054-48367073 Msa0551980:intron 55.0%
CCTTTGTGCTTCCAGCTTGC+GGG - chr4_1:48372819-48372838 Msa0551980:intron 55.0%
!! TGCGGGTGTTGTTGCAGTTG+AGG - chr4_1:48372836-48372855 Msa0551980:intron 55.0%
GAGCACATCCAGAGAGATCC+GGG - chr4_1:48373379-48373398 Msa0551980:intron 55.0%
CCATCAAACCCGGATCTCTC+TGG + chr4_1:48373390-48373409 None:intergenic 55.0%
CCAGAGAGATCCGGGTTTGA+TGG - chr4_1:48373387-48373406 Msa0551980:intron 55.0%
TGTCCAAGGGCCATCAAACC+CGG + chr4_1:48373400-48373419 None:intergenic 55.0%
! GTTTGATGGCCCTTGGACAG+AGG - chr4_1:48373401-48373420 Msa0551980:intron 55.0%
TCAGAGGGTCCTCTGTCCAA+GGG + chr4_1:48373413-48373432 None:intergenic 55.0%
TTCAGAGGGTCCTCTGTCCA+AGG + chr4_1:48373414-48373433 None:intergenic 55.0%
ATTCTCCCTCTGGCAGGATG+AGG - chr4_1:48374329-48374348 Msa0551980:intron 55.0%
TGCATCCTCATCCTGCCAGA+GGG + chr4_1:48374337-48374356 None:intergenic 55.0%
ATGCATCCTCATCCTGCCAG+AGG + chr4_1:48374338-48374357 None:intergenic 55.0%
! TGGCTTTGCGCCAAGCTCAA+AGG - chr4_1:48374401-48374420 Msa0551980:intron 55.0%
GATGGTCAGAGGTGAACGTG+AGG + chr4_1:48375979-48375998 None:intergenic 55.0%
TCCTGTGGATGCAACCGTAC+TGG - chr4_1:48377025-48377044 Msa0551980:intron 55.0%
GGTTGGATGTCACGTCTGTG+TGG - chr4_1:48377150-48377169 Msa0551980:intron 55.0%
CTTGGTCACGGGAAGAGGCT+GGG + chr4_1:48366728-48366747 None:intergenic 60.0%
TCTTGGTCACGGGAAGAGGC+TGG + chr4_1:48366729-48366748 None:intergenic 60.0%
GTGGCACGATGGTACGCTGA+AGG + chr4_1:48366970-48366989 None:intergenic 60.0%
GCTTGCCAGTGCACTTGACC+CGG - chr4_1:48367734-48367753 Msa0551980:intron 60.0%
CTTGCCAGTGCACTTGACCC+GGG - chr4_1:48367735-48367754 Msa0551980:intron 60.0%
CAAACCCGGGTCAAGTGCAC+TGG + chr4_1:48367742-48367761 None:intergenic 60.0%
!! TACCTTGGTGCTTCGACCCC+TGG - chr4_1:48368556-48368575 Msa0551980:intron 60.0%
! TACCAGGGGTCGAAGCACCA+AGG + chr4_1:48368561-48368580 None:intergenic 60.0%
GGGGCTGAAGTGCAAAGACC+TGG + chr4_1:48368995-48369014 None:intergenic 60.0%
! GGAGGTTTGGAGTGGGAGAC+CGG + chr4_1:48369214-48369233 None:intergenic 60.0%
AAGGGCTGGGTCTTGGACTC+TGG + chr4_1:48370251-48370270 None:intergenic 60.0%
AACAATTGGCGCCCACCGTG+GGG + chr4_1:48371150-48371169 None:intergenic 60.0%
CAACAATTGGCGCCCACCGT+GGG + chr4_1:48371151-48371170 None:intergenic 60.0%
ACGGTGGGCGCCAATTGTTG+CGG - chr4_1:48371151-48371170 Msa0551980:intron 60.0%
CTTGGTCACGGGAAGAGGCT+GGG + chr4_1:48366728-48366747 None:intergenic 60.0%
TCTTGGTCACGGGAAGAGGC+TGG + chr4_1:48366729-48366748 None:intergenic 60.0%
GTGGCACGATGGTACGCTGA+AGG + chr4_1:48366970-48366989 None:intergenic 60.0%
! CCCGCAAGCTGGAAGCACAA+AGG + chr4_1:48372822-48372841 None:intergenic 60.0%
CTGCAACAACACCCGCAAGC+TGG + chr4_1:48372833-48372852 None:intergenic 60.0%
ATCAGGAAGCCGCCCATCTC+TGG + chr4_1:48373000-48373019 None:intergenic 60.0%
! ACTGTCTGGGGCACATACGC+TGG - chr4_1:48373274-48373293 Msa0551980:intron 60.0%
! GATCCGGGTTTGATGGCCCT+TGG - chr4_1:48373394-48373413 Msa0551980:intron 60.0%
GCCAGTACGGTTGCATCCAC+AGG + chr4_1:48377029-48377048 None:intergenic 60.0%
AGTTGTAGCTGCCGCTGCAG+TGG - chr4_1:48377064-48377083 Msa0551980:intron 60.0%
ACCGAGGATCACCACTGCAG+CGG + chr4_1:48377078-48377097 None:intergenic 60.0%
GCTGCTCTCTCCCCCAGAGT+AGG + chr4_1:48366615-48366634 None:intergenic 65.0%
CGGGAAGAGGCTGGGACTGA+GGG + chr4_1:48366720-48366739 None:intergenic 65.0%
ACGGGAAGAGGCTGGGACTG+AGG + chr4_1:48366721-48366740 None:intergenic 65.0%
GCAACAATTGGCGCCCACCG+TGG + chr4_1:48371152-48371171 None:intergenic 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG + chr4_1:48366615-48366634 None:intergenic 65.0%
CGGGAAGAGGCTGGGACTGA+GGG + chr4_1:48366720-48366739 None:intergenic 65.0%
ACGGGAAGAGGCTGGGACTG+AGG + chr4_1:48366721-48366740 None:intergenic 65.0%
GCCGCTGCAGTGGTGATCCT+CGG - chr4_1:48377074-48377093 Msa0551980:intron 65.0%
TGGCGCCCACCGTGGGGCAA+AGG + chr4_1:48371144-48371163 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 48365281 48377495 48365281 ID=Msa0551980;Name=Msa0551980
chr4_1 mRNA 48365281 48377495 48365281 ID=Msa0551980-mRNA-1;Parent=Msa0551980;Name=Msa0551980-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.9|1|0.88|0.8|10|365|279
chr4_1 exon 48365281 48365752 48365281 ID=Msa0551980-mRNA-1:exon:13174;Parent=Msa0551980-mRNA-1
chr4_1 exon 48368347 48368431 48368347 ID=Msa0551980-mRNA-1:exon:13173;Parent=Msa0551980-mRNA-1
chr4_1 exon 48369053 48369155 48369053 ID=Msa0551980-mRNA-1:exon:13172;Parent=Msa0551980-mRNA-1
chr4_1 exon 48369322 48369401 48369322 ID=Msa0551980-mRNA-1:exon:13171;Parent=Msa0551980-mRNA-1
chr4_1 exon 48369481 48369563 48369481 ID=Msa0551980-mRNA-1:exon:13170;Parent=Msa0551980-mRNA-1
chr4_1 exon 48369747 48369795 48369747 ID=Msa0551980-mRNA-1:exon:13169;Parent=Msa0551980-mRNA-1
chr4_1 exon 48369877 48369942 48369877 ID=Msa0551980-mRNA-1:exon:13168;Parent=Msa0551980-mRNA-1
chr4_1 exon 48376966 48377015 48376966 ID=Msa0551980-mRNA-1:exon:13167;Parent=Msa0551980-mRNA-1
chr4_1 exon 48377155 48377279 48377155 ID=Msa0551980-mRNA-1:exon:13166;Parent=Msa0551980-mRNA-1
chr4_1 exon 48377404 48377495 48377404 ID=Msa0551980-mRNA-1:exon:13165;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48377404 48377495 48377404 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48377155 48377279 48377155 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48376966 48377015 48376966 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48369877 48369942 48369877 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48369747 48369795 48369747 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48369481 48369563 48369481 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48369322 48369401 48369322 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48369053 48369155 48369053 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48368347 48368431 48368347 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 CDS 48365646 48365752 48365646 ID=Msa0551980-mRNA-1:cds;Parent=Msa0551980-mRNA-1
chr4_1 three_prime_UTR 48365281 48365645 48365281 ID=Msa0551980-mRNA-1:three_prime_utr;Parent=Msa0551980-mRNA-1
Gene Sequence

>Msa0551980

ATGGAGTATCTCAAGGAAATCGAAAAAGCTCGTCGTGATCTCCGTGCTCTCATCGCCAACAGAAACTGTGCTCCCCTCATGCTTCGCTTAGCGTGGCACGATGCTGGAACTTATGATGCAAAGACCAAGACCGGTGGACCTAATGGTTCTATTCGGAACGAGGAAGAGTTTTCTCATGGTGCTAATAATGGATTGAAGAAAGCTATTGATTTTTGCGAGGAAGTCAAGGCAAAACATCCTAAGATCTCATATGCAGACCTTTATCAGCTTGCGGGTGTTGTTGCAGTTGAGGTTACTGGGGGTCCCACAGTCAACTTTGTTCCCGGAAGAAGGGATTCAAAAGTATGTACCAGAGATGGGCGGCTTCCTGATGCTAAACAAGGTGTGTCGCATCTCCGTGATATCTTTTATCGTATGGGCTTGACTGACAAAGATATTGTTGCACTGTCTGGGGCACATACGCTGGGAAGAGCACATCCAGAGAGATCCGGGTTTGATGGCCCTTGGACAGAGGACCCTCTGAAGTTTGATAACTCATATTTTCAGATACTTTTGGAAGAAGATTCTGCAGCTCTGCTTAAACTTCCAACAGACAGGGCTTTATTGGATGATCCTGAATTTTGCCGTTATGTTGAGCTGTATGCGAAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCACATAAGAAACTTTCAGAGCTTGGCTTTGCGCCAAGCTCAAAGGCAACTGCTCCTGTGGATGCAACCGTACTGGCACAAAGCGCTTTTGGAGTTGTAGCTGCCGCTGCAGTGGTGATCCTCGGTTACTTGTATGAAACTCACAAAAGAGGGAAGTAG
Protein sequence

>Msa0551980

MEYLKEIEKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEFSHGANNGLKKAIDFCEEVKAKHPKISYADLYQLAGVVAVEVTGGPTVNFVPGRRDSKVCTRDGRLPDAKQGVSHLRDIFYRMGLTDKDIVALSGAHTLGRAHPERSGFDGPWTEDPLKFDNSYFQILLEEDSAALLKLPTDRALLDDPEFCRYVELYAKDEDAFFRDYAESHKKLSELGFAPSSKATAPVDATVLAQSAFGVVAAAAVVILGYLYETHKRGK*