AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554530 MtrunA17_Chr4g0030271 94.975 796 39 1 1 795 1 796 0.0 1522
Msa0554530 MtrunA17_Chr1g0181811 44.604 695 345 13 77 762 73 736 2.45e-153 466
Msa0554530 MtrunA17_Chr7g0276361 59.690 129 52 0 82 210 7 135 6.81e-49 182
Msa0554530 MtrunA17_Chr7g0276361 70.833 48 14 0 716 763 537 584 1.04e-15 81.3
Msa0554530 MtrunA17_Chr3g0127941 56.115 139 61 0 80 218 47 185 1.09e-48 183
Msa0554530 MtrunA17_Chr3g0127941 31.503 346 170 15 437 762 374 672 7.60e-18 88.2
Msa0554530 MtrunA17_Chr8g0345901 53.731 134 62 0 77 210 24 157 1.32e-44 171
Msa0554530 MtrunA17_Chr8g0345901 74.468 47 12 0 720 766 584 630 6.02e-15 79.0
Msa0554530 MtrunA17_Chr4g0061021 44.531 128 71 0 83 210 27 154 1.56e-31 130
Msa0554530 MtrunA17_Chr4g0061021 70.833 48 14 0 716 763 501 548 4.54e-16 82.4
Msa0554530 MtrunA17_Chr3g0091641 43.750 128 72 0 83 210 18 145 5.94e-29 122
Msa0554530 MtrunA17_Chr3g0091641 63.793 58 18 1 709 763 484 541 1.75e-15 80.5
Msa0554530 MtrunA17_Chr2g0304841 40.157 127 72 2 84 210 18 140 1.49e-22 103
Msa0554530 MtrunA17_Chr1g0161431 36.025 161 88 3 89 248 15 161 4.38e-22 101
Msa0554530 MtrunA17_Chr3g0134481 40.800 125 71 1 89 213 12 133 1.18e-21 93.6
Msa0554530 MtrunA17_Chr4g0067981 33.537 164 94 3 89 251 35 184 1.95e-21 99.8
Msa0554530 MtrunA17_Chr2g0294911 34.568 162 100 3 62 222 7 163 2.28e-21 99.4
Msa0554530 MtrunA17_Chr4g0074411 38.235 136 80 2 81 216 15 146 2.64e-21 99.0
Msa0554530 MtrunA17_Chr3g0137101 39.344 122 71 1 89 210 12 130 4.38e-21 98.6
Msa0554530 MtrunA17_Chr4g0074401 37.410 139 82 3 78 216 12 145 8.45e-20 94.4
Msa0554530 MtrunA17_Chr1g0149841 32.927 164 101 2 89 252 9 163 1.06e-19 93.2
Msa0554530 MtrunA17_Chr3g0123131 36.585 123 73 2 89 210 17 135 1.65e-19 93.2
Msa0554530 MtrunA17_Chr8g0376881 35.772 123 74 2 89 210 29 147 2.41e-18 89.4
Msa0554530 MtrunA17_Chr7g0256551 34.307 137 72 3 91 209 11 147 1.35e-17 83.2
Msa0554530 MtrunA17_Chr7g0275401 34.615 130 82 1 91 220 11 137 2.92e-17 83.2
Msa0554530 MtrunA17_Chr1g0149851 34.426 122 77 1 89 210 9 127 8.78e-17 84.3
Msa0554530 MtrunA17_Chr5g0414931 36.719 128 68 2 89 203 16 143 3.01e-15 76.3
Msa0554530 MtrunA17_Chr1g0170741 36.220 127 69 2 89 203 8 134 3.06e-15 75.1
Msa0554530 MtrunA17_Chr7g0275891 33.083 133 85 2 89 220 9 138 1.64e-14 75.9
Msa0554530 MtrunA17_Chr3g0128691 34.400 125 69 2 91 203 20 143 5.71e-14 70.5
Msa0554530 MtrunA17_Chr3g0082861 30.657 137 77 2 91 209 6 142 8.12e-14 70.1
Msa0554530 MtrunA17_Chr8g0352871 30.882 136 77 2 91 209 11 146 3.14e-13 68.9
Msa0554530 MtrunA17_Chr3g0134461 31.579 133 87 2 89 220 12 141 6.74e-13 68.2
Msa0554530 MtrunA17_Chr3g0118211 30.827 133 83 1 86 209 20 152 8.65e-13 68.2
Msa0554530 MtrunA17_Chr8g0383961 33.594 128 80 2 89 215 18 141 1.48e-12 68.6
Msa0554530 MtrunA17_Chr4g0059571 30.769 130 81 1 89 209 26 155 1.59e-12 67.8
Msa0554530 MtrunA17_Chr4g0074421 41.463 82 45 1 135 216 2 80 6.42e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554530 AT5G02810.1 43.179 755 334 23 47 777 43 726 3.82e-133 413
Msa0554530 AT5G60100.5 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0554530 AT5G60100.5 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0554530 AT5G60100.3 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0554530 AT5G60100.3 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0554530 AT5G60100.1 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0554530 AT5G60100.1 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0554530 AT5G60100.7 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0554530 AT5G60100.6 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0554530 AT5G60100.4 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0554530 AT5G60100.2 41.616 495 172 14 73 528 48 464 6.07e-85 280
Msa0554530 AT5G60100.2 73.585 53 12 1 710 762 461 511 1.76e-16 84.0
Msa0554530 AT5G02810.2 40.665 632 297 21 165 777 10 582 7.46e-82 273
Msa0554530 AT2G46790.1 48.438 192 84 2 77 268 25 201 1.82e-54 196
Msa0554530 AT2G46790.1 78.723 47 10 0 720 766 417 463 9.27e-17 84.3
Msa0554530 AT2G46790.3 48.438 192 84 2 77 268 25 201 1.92e-54 195
Msa0554530 AT5G24470.1 58.779 131 54 0 80 210 41 171 4.62e-51 188
Msa0554530 AT5G24470.1 76.087 46 11 0 720 765 509 554 3.40e-16 83.2
Msa0554530 AT5G61380.1 45.312 128 70 0 83 210 13 140 1.31e-30 128
Msa0554530 AT5G61380.1 60.417 48 19 0 716 763 529 576 4.39e-13 73.2
Msa0554530 AT3G16857.1 36.232 138 83 2 87 223 35 168 1.64e-21 100
Msa0554530 AT3G16857.2 36.232 138 83 2 87 223 35 168 1.67e-21 100
Msa0554530 AT2G25180.1 35.220 159 98 3 84 242 13 166 5.63e-21 98.6
Msa0554530 AT4G31920.1 38.095 126 74 2 84 209 13 134 1.75e-19 93.6
Msa0554530 AT1G67710.1 37.209 129 75 3 83 210 6 129 8.10e-19 91.3
Msa0554530 AT2G46670.1 78.723 47 10 0 720 766 132 178 1.96e-18 84.3
Msa0554530 AT2G01760.1 37.097 124 76 1 87 210 9 130 3.88e-18 87.8
Msa0554530 AT2G46790.5 78.723 47 10 0 720 766 260 306 2.07e-17 84.3
Msa0554530 AT2G46790.4 78.723 47 10 0 720 766 260 306 2.07e-17 84.3
Msa0554530 AT2G46790.2 78.723 47 10 0 720 766 300 346 5.05e-17 84.0
Msa0554530 AT2G46790.2 43.434 99 41 2 170 268 1 84 1.05e-15 80.1
Msa0554530 AT1G59940.2 28.780 205 125 3 89 281 125 320 1.93e-15 79.0
Msa0554530 AT1G59940.1 28.780 205 125 3 89 281 33 228 3.26e-15 76.3
Msa0554530 AT5G58080.1 34.615 130 79 3 81 210 12 135 2.63e-14 77.4
Msa0554530 AT1G10470.3 33.333 144 81 2 84 215 15 155 2.83e-14 73.9
Msa0554530 AT1G10470.1 33.333 144 81 2 84 215 29 169 3.38e-14 73.9
Msa0554530 AT3G16857.3 40.000 90 49 2 135 223 13 98 4.66e-14 76.6
Msa0554530 AT3G57040.2 29.710 138 78 2 91 209 11 148 1.29e-13 71.6
Msa0554530 AT3G57040.1 29.710 138 78 2 91 209 11 148 1.29e-13 71.6
Msa0554530 AT2G01760.2 30.263 152 76 2 87 210 9 158 7.41e-13 71.6
Msa0554530 AT3G48100.1 32.800 125 74 1 89 203 25 149 1.43e-12 67.4
Msa0554530 AT1G19050.1 30.128 156 96 3 84 228 17 170 1.50e-12 67.8
Msa0554530 AT5G62920.1 33.600 125 68 3 79 203 39 148 1.62e-12 67.4
Msa0554530 AT1G74890.1 29.412 153 92 2 89 232 18 163 1.68e-12 67.8
Msa0554530 AT3G62670.1 34.694 147 84 5 81 223 34 172 2.28e-12 70.5
Msa0554530 AT2G41310.1 29.412 136 79 2 91 209 11 146 5.91e-12 66.6

Find 226 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCTCTAGATTCAGTTTA+TGG 0.124447 4_1:+51913876 Msa0554530:three_prime_UTR
CAACCCACTGTTTCCATCTT+TGG 0.194811 4_1:-51908662 None:intergenic
GAAAGTAATGGTACAAATTA+TGG 0.199380 4_1:+51912731 Msa0554530:CDS
GAAAATCAGGGTACAAATTT+TGG 0.204154 4_1:+51911417 Msa0554530:CDS
CTTCCATTAGACTGCTGATT+TGG 0.229504 4_1:-51912332 None:intergenic
TGTGATTTCCTGGATCTTCT+AGG 0.241633 4_1:-51909068 None:intergenic
TTCCATTAGACTGCTGATTT+GGG 0.257919 4_1:-51912331 None:intergenic
GAACCAAACATACACTAAAT+TGG 0.271670 4_1:+51907516 Msa0554530:five_prime_UTR
AGAAAGATGCTTTGACAAAA+AGG 0.272028 4_1:+51912970 Msa0554530:CDS
TGTAATATCAACAGTTAATA+TGG 0.281302 4_1:+51914067 Msa0554530:three_prime_UTR
CAGATCAGCGGCCACGTGTT+AGG 0.286244 4_1:+51913466 Msa0554530:CDS
CTTGAAGTTAGAATCAATTC+TGG 0.287321 4_1:-51907344 None:intergenic
TTGTGTGTTGTCTCTGTAAT+TGG 0.290138 4_1:-51912284 None:intergenic
TGTACATTGCTGAGCATCTT+TGG 0.292060 4_1:-51912681 None:intergenic
GACAAGAAACCCGAGTCTTC+TGG 0.298741 4_1:+51912416 Msa0554530:CDS
ATATACTTATGAGATTAAAT+TGG 0.305249 4_1:-51907125 None:intergenic
ATAGTTTAAGACTAGATTAA+TGG 0.320003 4_1:-51907096 None:intergenic
AAAACCTCTGGCAACATGTT+TGG 0.320017 4_1:+51909391 Msa0554530:CDS
AATTAGGATGCAGGAAAATC+AGG 0.320205 4_1:+51911404 Msa0554530:CDS
AATAAGCTGAAAACAGCTTA+TGG 0.322779 4_1:-51908021 None:intergenic
TCTCCAATTTAGTGTATGTT+TGG 0.328498 4_1:-51907519 None:intergenic
CTAACAATCCAATGCGTAAA+GGG 0.332317 4_1:+51911289 Msa0554530:CDS
TCATATAGAGACTAAATTGA+TGG 0.332446 4_1:-51907168 None:intergenic
AAGAGGACAGTGATAAAATT+AGG 0.332509 4_1:+51911388 Msa0554530:CDS
CACCTGTCCTTTAACGATTC+CGG 0.332953 4_1:-51912534 None:intergenic
AACGTAAAGTGGTTTATGTT+TGG 0.335080 4_1:-51907440 None:intergenic
GAATATGCCGGAATCGTTAA+AGG 0.345276 4_1:+51912527 Msa0554530:CDS
AGTGATTGTGTATCAAAATC+AGG 0.349599 4_1:+51913979 Msa0554530:three_prime_UTR
ATAAGTTTGTTTCGATCTCT+TGG 0.349755 4_1:+51908269 Msa0554530:five_prime_UTR
TATTGCAATGGGTAAAGATT+TGG 0.350339 4_1:+51911215 Msa0554530:CDS
GATGCTGAGTGTGCTCAATT+TGG 0.350604 4_1:-51912577 None:intergenic
CATTTATCATGATATTGTTA+TGG 0.351525 4_1:+51907708 Msa0554530:five_prime_UTR
AAGCGAGGAACTTGTATCTA+TGG 0.357804 4_1:+51913653 Msa0554530:CDS
TTGTTAACACTTTGTCTAGT+TGG 0.361690 4_1:-51908181 None:intergenic
AGCAGTGATGAGAATGATTA+TGG 0.369778 4_1:+51910055 Msa0554530:CDS
AGATCAGCGGCCACGTGTTA+GGG 0.374526 4_1:+51913467 Msa0554530:CDS
GATGGTATGCAGCACAATAA+AGG 0.379747 4_1:+51911333 Msa0554530:CDS
ACAAGATCAATGTGATTTCC+TGG 0.380863 4_1:-51909078 None:intergenic
GGTACAAATTATGGTTTGAA+TGG 0.382401 4_1:+51912740 Msa0554530:CDS
AAGCTATCTTAGAGAGCTTA+AGG 0.386294 4_1:-51908045 None:intergenic
CAGGCTTTGTATGCACCACT+TGG 0.388304 4_1:-51911031 None:intergenic
TTTCATTTCTATCTGGGTGC+TGG 0.395811 4_1:+51907850 Msa0554530:five_prime_UTR
TAATGTTGGGAAACAAAGTT+TGG 0.397169 4_1:+51908528 Msa0554530:CDS
CAACAAGGTGAGGACTTATC+AGG 0.402675 4_1:-51908459 None:intergenic
GATGTCATGTCATGATTCTA+TGG 0.404857 4_1:+51909296 Msa0554530:CDS
ACTTGGGCACACGTGCTATC+AGG 0.407813 4_1:-51911014 None:intergenic
TAGTTTAAGACTAGATTAAT+GGG 0.409271 4_1:-51907095 None:intergenic
AAACATGTCAAAATCAATTC+TGG 0.414270 4_1:-51907291 None:intergenic
CTTTCTCAGTCTAATGATAG+TGG 0.417323 4_1:+51909959 Msa0554530:intron
CAAGATGATCAATTGGTTCA+TGG 0.417464 4_1:-51911097 None:intergenic
TGTACATTATCAAATGCGTT+TGG 0.418003 4_1:+51912698 Msa0554530:CDS
GATTGATTAGGAGGTGAAAC+TGG 0.419855 4_1:-51910981 None:intergenic
TGCTAAGACAGAAGCTTTGA+GGG 0.426351 4_1:+51907757 Msa0554530:five_prime_UTR
CGATTCCGGCATATTCATCC+TGG 0.427709 4_1:-51912520 None:intergenic
CATGAACCAATTGATCATCT+TGG 0.430561 4_1:+51911098 Msa0554530:CDS
CTCGTAATCCAGTTACATAC+TGG 0.430763 4_1:+51908737 Msa0554530:CDS
ACCCCAAATCAGCAGTCTAA+TGG 0.431681 4_1:+51912329 Msa0554530:CDS
AATTCACTCAACAAGGGGAT+TGG 0.433130 4_1:+51908425 Msa0554530:five_prime_UTR
CCCGAGTCTTCTGGAGGGAT+TGG 0.433839 4_1:+51912425 Msa0554530:CDS
AGTGCATCTGGTGTTATGTA+AGG 0.439754 4_1:+51907621 Msa0554530:five_prime_UTR
ACGTTGTGTGTGCTTTGTTA+AGG 0.439905 4_1:+51908824 Msa0554530:CDS
TTATATGGATTAAGAAAAGA+AGG 0.440333 4_1:+51906747 Msa0554530:five_prime_UTR
GTGTTTAAGTGTTTGTCAAA+AGG 0.441973 4_1:+51909324 Msa0554530:CDS
AGAGATTTGAACACTTCAAA+TGG 0.442663 4_1:+51911474 Msa0554530:CDS
TAAGTTTGTTTCGATCTCTT+GGG 0.444146 4_1:+51908270 Msa0554530:five_prime_UTR
TTTAGTAAGGTAACCAAAGA+TGG 0.445366 4_1:+51908649 Msa0554530:CDS
GTGCTAAGACAGAAGCTTTG+AGG 0.445375 4_1:+51907756 Msa0554530:five_prime_UTR
TTAAGGAATTGTGGCTATGA+AGG 0.445432 4_1:+51908841 Msa0554530:CDS
ATTCAATCCAAATAGACATA+TGG 0.446547 4_1:-51907934 None:intergenic
AAGAAGCTAGATGCAGTTGC+TGG 0.447864 4_1:-51913742 None:intergenic
ATTCACTCAACAAGGGGATT+GGG 0.449211 4_1:+51908426 Msa0554530:five_prime_UTR
TTTGTACCATTACTTTCTGC+TGG 0.449492 4_1:-51912725 None:intergenic
GGCATACCAAGATGATCAAT+TGG 0.451243 4_1:-51911104 None:intergenic
TTAAGTTCGTTCCTCCGAAT+AGG 0.453701 4_1:-51909369 None:intergenic
GATATGTATTAGTGGAAGTC+AGG 0.455777 4_1:-51912370 None:intergenic
CCAGTTGATGATTCAGACCC+TGG 0.456694 4_1:-51908613 None:intergenic
TGAACTAACATTGGAAAGGA+TGG 0.459465 4_1:+51911554 Msa0554530:CDS
GAGATCCACTGCAGCCTTGT+CGG 0.460095 4_1:-51912624 None:intergenic
GGAGCATCATGAGATTGATT+AGG 0.462749 4_1:-51910993 None:intergenic
CGTGCTAAGATATGTATTAG+TGG 0.463004 4_1:-51912378 None:intergenic
TGTGCATTTGACAACAATAC+TGG 0.463216 4_1:+51910031 Msa0554530:CDS
TTTCCAGATGATATTGCAAT+GGG 0.463893 4_1:+51911204 Msa0554530:intron
AAAGTGAGTTGAACGTAAAG+TGG 0.464915 4_1:-51907451 None:intergenic
TTATTAACCCCTTTACGCAT+TGG 0.471608 4_1:-51911297 None:intergenic
GTTGTGTTTGCAGAACTTGA+TGG 0.471966 4_1:+51908373 Msa0554530:intron
AATAAGATGTCTGATATAGA+TGG 0.472619 4_1:+51911315 Msa0554530:CDS
GTAAGAGATCATGAACTGAT+TGG 0.474021 4_1:-51912646 None:intergenic
CTGAAAACATTAGCAGTATG+TGG 0.478574 4_1:+51911051 Msa0554530:CDS
CGTTCACCTCGGAAGAAGCT+TGG 0.481141 4_1:+51913769 Msa0554530:three_prime_UTR
CCTCTAGAAACTAAAGTATG+AGG 0.482457 4_1:+51914032 Msa0554530:three_prime_UTR
TAATACAGCTTCTGCTTACC+AGG 0.483317 4_1:+51911777 Msa0554530:CDS
GATACAATGAACAATAATGT+TGG 0.484389 4_1:+51908514 Msa0554530:exon
AAATCTCTGCTTTCAGCATG+TGG 0.484591 4_1:-51911459 None:intergenic
CAGGCTCAAACTGGAAATGT+AGG 0.485646 4_1:+51912227 Msa0554530:intron
AGAGTAGTTAATGAAGGGCC+AGG 0.486659 4_1:+51908595 Msa0554530:CDS
AATAATAGAGTAGTTAATGA+AGG 0.486855 4_1:+51908589 Msa0554530:CDS
ATACAATGAACAATAATGTT+GGG 0.486890 4_1:+51908515 Msa0554530:exon
AGATGGAAACAGTGGGTTGA+AGG 0.487129 4_1:+51908666 Msa0554530:CDS
TTTCCACGCTTGAAGACCAT+TGG 0.487528 4_1:-51909043 None:intergenic
ATCATGATATTGTTATGGAA+TGG 0.489085 4_1:+51907713 Msa0554530:five_prime_UTR
CCAGGGTCTGAATCATCAAC+TGG 0.491779 4_1:+51908613 Msa0554530:CDS
CTTAATAGCAGAGACTGAAA+TGG 0.494270 4_1:+51907213 Msa0554530:five_prime_UTR
TGAAGAACGAATTGCATTGA+GGG 0.495424 4_1:+51912913 Msa0554530:CDS
TACATCAATAAAAGTTCTGC+TGG 0.497131 4_1:+51908777 Msa0554530:CDS
AGACCTATTCCCGTTACAAA+AGG 0.499408 4_1:-51909120 None:intergenic
GCCAATCCCTCCAGAAGACT+CGG 0.499926 4_1:-51912426 None:intergenic
AATGATAGTGGGAGTGAAAG+TGG 0.501913 4_1:+51909971 Msa0554530:CDS
TCAGAGGAAGACTTCTTCCC+AGG 0.502932 4_1:+51912502 Msa0554530:CDS
GAGAGAATAAACATTGGAAG+TGG 0.507163 4_1:+51912884 Msa0554530:CDS
AGTGTGGTTGATAATAATAT+AGG 0.507414 4_1:+51908489 Msa0554530:five_prime_UTR
TTCAGGTTAGATATCACAGC+AGG 0.507743 4_1:+51913433 Msa0554530:intron
TCTAACAATCCAATGCGTAA+AGG 0.510088 4_1:+51911288 Msa0554530:CDS
CAACTGAGCTATTGTCTAGT+GGG 0.510877 4_1:-51912259 None:intergenic
CTTTCCAGATGATATTGCAA+TGG 0.511570 4_1:+51911203 Msa0554530:intron
TCTTGGGTGGAGTAAGCCCC+AGG 0.516553 4_1:+51908286 Msa0554530:five_prime_UTR
GACATGAACATGGGGTCCAT+TGG 0.517379 4_1:-51913916 None:intergenic
CAGTGATAAAATTAGGATGC+AGG 0.518186 4_1:+51911395 Msa0554530:CDS
ACAGTCAATGCTGTTTCCAA+TGG 0.518670 4_1:+51909027 Msa0554530:intron
GGTGCTGGAATTCAGAGGTA+TGG 0.520859 4_1:+51907865 Msa0554530:five_prime_UTR
CCTCATACTTTAGTTTCTAG+AGG 0.521569 4_1:-51914032 None:intergenic
AAATGACACTAGATTTAGTA+AGG 0.524322 4_1:+51908636 Msa0554530:CDS
TCCAATGTTAGTTCAAGTGA+TGG 0.527354 4_1:-51911546 None:intergenic
ACATTATCAAATGCGTTTGG+AGG 0.528574 4_1:+51912701 Msa0554530:CDS
TGCCGGAATCGTTAAAGGAC+AGG 0.528938 4_1:+51912532 Msa0554530:CDS
GAGAGTGATCACGGGAGTAA+TGG 0.529561 4_1:+51912773 Msa0554530:CDS
CATTATCAAATGCGTTTGGA+GGG 0.530096 4_1:+51912702 Msa0554530:CDS
GAAAATCGTGATGTGACAGC+TGG 0.531023 4_1:+51912839 Msa0554530:CDS
AGAAGAATCTGTGAGTAGGT+AGG 0.534355 4_1:+51913805 Msa0554530:three_prime_UTR
ATTAGGATGCAGGAAAATCA+GGG 0.536240 4_1:+51911405 Msa0554530:CDS
TGTGCTTTGTTAAGGAATTG+TGG 0.537869 4_1:+51908832 Msa0554530:CDS
TCCATCACTTGAACTAACAT+TGG 0.539145 4_1:+51911545 Msa0554530:CDS
TTGCTCCCCATGATAAGTGT+GGG 0.541341 4_1:+51908235 Msa0554530:five_prime_UTR
TCCCCTTGTTGAGTGAATTG+TGG 0.542701 4_1:-51908421 None:intergenic
GATGGAAGTGACAATGGAAG+TGG 0.543929 4_1:+51910100 Msa0554530:CDS
ATGGGTAAAGATTTGGCTAT+GGG 0.546298 4_1:+51911222 Msa0554530:CDS
CATTGCCGACAAGGCTGCAG+TGG 0.546360 4_1:+51912619 Msa0554530:CDS
TGGAAAGTCCTAGAAGATCC+AGG 0.547640 4_1:+51909060 Msa0554530:CDS
TCCATTAGACTGCTGATTTG+GGG 0.548803 4_1:-51912330 None:intergenic
ATTAGACTGCTGATTTGGGG+TGG 0.550115 4_1:-51912327 None:intergenic
AAACATTACCGACATGAACA+TGG 0.550526 4_1:-51913926 None:intergenic
AATGGGTAAAGATTTGGCTA+TGG 0.551079 4_1:+51911221 Msa0554530:CDS
GTTTGTTTCGATCTCTTGGG+TGG 0.551910 4_1:+51908273 Msa0554530:five_prime_UTR
AGGCTTTGTATGCACCACTT+GGG 0.553411 4_1:-51911030 None:intergenic
GCATCATGAGATTGATTAGG+AGG 0.554225 4_1:-51910990 None:intergenic
GATGGAAACAGTGGGTTGAA+GGG 0.554396 4_1:+51908667 Msa0554530:CDS
TTGTGTTTGCAGAACTTGAT+GGG 0.555239 4_1:+51908374 Msa0554530:intron
ACCAGATGCACTAAAATGAC+AGG 0.558415 4_1:-51907610 None:intergenic
GATGTGACAGCTGGGAGCAT+TGG 0.564508 4_1:+51912848 Msa0554530:CDS
GAATGGCACTTACTAATCAC+AGG 0.564545 4_1:-51909183 None:intergenic
AACATTACCGACATGAACAT+GGG 0.567063 4_1:-51913925 None:intergenic
TGATCACGGGAGTAATGGAC+AGG 0.569320 4_1:+51912778 Msa0554530:CDS
ATCAATAAAAGTTCTGCTGG+TGG 0.570871 4_1:+51908780 Msa0554530:CDS
AGTGCAGCTGAGAGTGATCA+CGG 0.574147 4_1:+51912764 Msa0554530:CDS
GATCAGCGGCCACGTGTTAG+GGG 0.574183 4_1:+51913468 Msa0554530:CDS
CAGGTGCGAGGTTCTGAACA+AGG 0.575372 4_1:+51912551 Msa0554530:CDS
TGCTCCCCATGATAAGTGTG+GGG 0.575571 4_1:+51908236 Msa0554530:five_prime_UTR
TTAGGAGGTGAAACTGGATG+AGG 0.576049 4_1:-51910975 None:intergenic
TTCTCCAAACATGTTGCCAG+AGG 0.577299 4_1:-51909395 None:intergenic
TCTTCCCAGGATGAATATGC+CGG 0.579674 4_1:+51912515 Msa0554530:CDS
AGAAGAAAATAAAGAAAGCG+AGG 0.580844 4_1:+51913638 Msa0554530:CDS
GTGATTGTGTATCAAAATCA+GGG 0.581270 4_1:+51913980 Msa0554530:three_prime_UTR
TTTCCAATGGTCTTCAAGCG+TGG 0.582223 4_1:+51909040 Msa0554530:CDS
AATCCACAATTCACTCAACA+AGG 0.582781 4_1:+51908418 Msa0554530:five_prime_UTR
TTGTAATCACATTGCCGACA+AGG 0.583248 4_1:+51912610 Msa0554530:CDS
GAGAATGATTATGGAAGCAG+AGG 0.583648 4_1:+51910064 Msa0554530:CDS
TAATAGAAGAATCTGTGAGT+AGG 0.584797 4_1:+51913801 Msa0554530:three_prime_UTR
AATTCTGGCCGCTGTTAACG+TGG 0.584820 4_1:-51907276 None:intergenic
ACAGCTGGGAGCATTGGAGT+TGG 0.585431 4_1:+51912854 Msa0554530:CDS
GTTCAAGATGGAAGTGACAA+TGG 0.586262 4_1:+51910094 Msa0554530:CDS
TTTCTCAGTCTAATGATAGT+GGG 0.586613 4_1:+51909960 Msa0554530:intron
TGACAATGGAAGTGGAACTC+AGG 0.587907 4_1:+51910108 Msa0554530:CDS
AATGAAACGACAAGCTGTTG+CGG 0.588902 4_1:-51907790 None:intergenic
GAACTAACATTGGAAAGGAT+GGG 0.589962 4_1:+51911555 Msa0554530:CDS
ATGAAGAACGAATTGCATTG+AGG 0.589999 4_1:+51912912 Msa0554530:CDS
GCAACAAAAGCATGCACTTG+AGG 0.591773 4_1:+51911260 Msa0554530:CDS
ATAATAGAGTAGTTAATGAA+GGG 0.592318 4_1:+51908590 Msa0554530:CDS
TTTAGAAGATGAAATGTGCA+AGG 0.593170 4_1:-51914152 None:intergenic
GACAATCAGAATGATAAATG+TGG 0.594838 4_1:+51912817 Msa0554530:CDS
AAAGATGACGAACATGTCAC+AGG 0.596117 4_1:+51911585 Msa0554530:CDS
TTTGCTCCCCATGATAAGTG+TGG 0.596722 4_1:+51908234 Msa0554530:five_prime_UTR
GCAACTGAGCTATTGTCTAG+TGG 0.597631 4_1:-51912260 None:intergenic
CACGGGAGTAATGGACAGGA+AGG 0.599973 4_1:+51912782 Msa0554530:CDS
ATCGTTAAAGGACAGGTGCG+AGG 0.600199 4_1:+51912539 Msa0554530:CDS
GAAGTTAGAATCAATTCTGG+AGG 0.607074 4_1:-51907341 None:intergenic
TCGTAATCCAGTTACATACT+GGG 0.608015 4_1:+51908738 Msa0554530:CDS
GCAATTGAGAGAATAAACAT+TGG 0.611269 4_1:+51912878 Msa0554530:CDS
AGAGGCTTGAGTGTTCAAGA+TGG 0.615535 4_1:+51910082 Msa0554530:CDS
GTTAACGTGGAATCAAACAT+AGG 0.615752 4_1:-51907263 None:intergenic
GCATCTGGTGTTATGTAAGG+TGG 0.616330 4_1:+51907624 Msa0554530:five_prime_UTR
GTAACTGGATTACGAGGTGG+TGG 0.624498 4_1:-51908730 None:intergenic
GATTCCGGCATATTCATCCT+GGG 0.625703 4_1:-51912519 None:intergenic
CACTTGAACTAACATTGGAA+AGG 0.626431 4_1:+51911550 Msa0554530:CDS
TAACAATCCAATGCGTAAAG+GGG 0.626567 4_1:+51911290 Msa0554530:CDS
GAGTAGTTAATGAAGGGCCA+GGG 0.627276 4_1:+51908596 Msa0554530:CDS
ATCTGGGTGCTGGAATTCAG+AGG 0.628183 4_1:+51907860 Msa0554530:five_prime_UTR
CCAATCCCTCCAGAAGACTC+GGG 0.629348 4_1:-51912425 None:intergenic
TCCACAATTCACTCAACAAG+GGG 0.629815 4_1:+51908420 Msa0554530:five_prime_UTR
TGAAAACATTAGCAGTATGT+GGG 0.631408 4_1:+51911052 Msa0554530:CDS
AAGAAACCCGAGTCTTCTGG+AGG 0.632510 4_1:+51912419 Msa0554530:CDS
ATGTCATGTCATGATTCTAT+GGG 0.635479 4_1:+51909297 Msa0554530:CDS
TGGGTGAAGTGCTCATGATA+CGG 0.636873 4_1:+51908393 Msa0554530:five_prime_UTR
AAAGCTTCTGTCTTAGCACA+AGG 0.638707 4_1:-51907752 None:intergenic
GGAGGGCCAGCAGAAAGTAA+TGG 0.640302 4_1:+51912719 Msa0554530:CDS
TGATAGCACGTGTGCCCAAG+TGG 0.641145 4_1:+51911016 Msa0554530:CDS
GTGCAGCTGAGAGTGATCAC+GGG 0.643094 4_1:+51912765 Msa0554530:CDS
GCTTCTTTGCACGTTCACCT+CGG 0.649116 4_1:+51913758 Msa0554530:three_prime_UTR
AATGGACCCCATGTTCATGT+CGG 0.654601 4_1:+51913918 Msa0554530:three_prime_UTR
GCTCCCCATGATAAGTGTGG+GGG 0.654841 4_1:+51908237 Msa0554530:five_prime_UTR
GTAACCAAAGATGGAAACAG+TGG 0.658997 4_1:+51908658 Msa0554530:CDS
CAGTATGTAACTGGATTACG+AGG 0.659366 4_1:-51908736 None:intergenic
GTTTGATTCCACGTTAACAG+CGG 0.659445 4_1:+51907268 Msa0554530:five_prime_UTR
ATCCACAATTCACTCAACAA+GGG 0.661316 4_1:+51908419 Msa0554530:five_prime_UTR
TGGGAAGAAGTCTTCCTCTG+AGG 0.668931 4_1:-51912500 None:intergenic
AAAATCGTGATGTGACAGCT+GGG 0.670781 4_1:+51912840 Msa0554530:CDS
ACAAATTGTCCCCTAACACG+TGG 0.674787 4_1:-51913477 None:intergenic
ATAGTATTTCTGCACCTCAG+AGG 0.679492 4_1:+51912486 Msa0554530:CDS
TAACCAAAGATGGAAACAGT+GGG 0.680991 4_1:+51908659 Msa0554530:CDS
TAGGAGGTGAAACTGGATGA+GGG 0.683091 4_1:-51910974 None:intergenic
AAAACTCCAAGCTTCTTCCG+AGG 0.683502 4_1:-51913775 None:intergenic
AACTGAGCTATTGTCTAGTG+GGG 0.684907 4_1:-51912258 None:intergenic
AGAACGAATTGCATTGAGGG+AGG 0.686550 4_1:+51912916 Msa0554530:CDS
ACATTACCGACATGAACATG+GGG 0.688460 4_1:-51913924 None:intergenic
GATCGATTCGAATCAATGAG+AGG 0.691333 4_1:+51908689 Msa0554530:CDS
AGAAACCCGAGTCTTCTGGA+GGG 0.698046 4_1:+51912420 Msa0554530:CDS
TATGTAACTGGATTACGAGG+TGG 0.727662 4_1:-51908733 None:intergenic
GCAGAATATAGACATGAACA+AGG 0.738100 4_1:-51913952 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GACTATTTTTTATTTTTTTT+TGG + chr4_1:51906893-51906912 Msa0554530:intron 10.0%
!!! TTTTATATATAATTCTCTAT+TGG + chr4_1:51907571-51907590 Msa0554530:five_prime_UTR 10.0%
!!! ATATAATGGAATTTTAAAAT+AGG + chr4_1:51910450-51910469 Msa0554530:intron 10.0%
!!! GTTTTAGATTTATTTATTTT+TGG + chr4_1:51911962-51911981 Msa0554530:intron 10.0%
!!! TTGTTTTCTTCTATTTATTT+TGG + chr4_1:51906858-51906877 Msa0554530:intron 15.0%
!! ATATACTTATGAGATTAAAT+TGG - chr4_1:51907128-51907147 None:intergenic 15.0%
!! ATTAATCTTATGAATCAATT+AGG + chr4_1:51909774-51909793 Msa0554530:intron 15.0%
!! TTAATCTTATGAATCAATTA+GGG + chr4_1:51909775-51909794 Msa0554530:intron 15.0%
!! AAAATAGGAAAGAATAATAA+TGG + chr4_1:51910465-51910484 Msa0554530:intron 15.0%
!! AAATAGGAAAGAATAATAAT+GGG + chr4_1:51910466-51910485 Msa0554530:intron 15.0%
!!! ATTATTTTGTAATTATTGTC+AGG + chr4_1:51910729-51910748 Msa0554530:intron 15.0%
!! ATTAGATGAATGAATAATTA+GGG - chr4_1:51910892-51910911 None:intergenic 15.0%
!! TATTAGATGAATGAATAATT+AGG - chr4_1:51910893-51910912 None:intergenic 15.0%
!! TAAAAAATACAGATAACATA+AGG - chr4_1:51912206-51912225 None:intergenic 15.0%
!! AATTGAGTTATAGAAATTAT+AGG - chr4_1:51913106-51913125 None:intergenic 15.0%
!!! TCCATATAAGAAAATTTTGT+GGG - chr4_1:51906736-51906755 None:intergenic 20.0%
!!! ATCCATATAAGAAAATTTTG+TGG - chr4_1:51906737-51906756 None:intergenic 20.0%
!!! TTATATGGATTAAGAAAAGA+AGG + chr4_1:51906747-51906766 Msa0554530:five_prime_UTR 20.0%
!!! ATTTTTTCTAAGTTATTGCA+TGG + chr4_1:51906919-51906938 Msa0554530:intron 20.0%
!!! TTTGTTTTTGTGTCTTATTT+TGG + chr4_1:51907065-51907084 Msa0554530:five_prime_UTR 20.0%
!!! TAGTTTAAGACTAGATTAAT+GGG - chr4_1:51907098-51907117 None:intergenic 20.0%
!!! ATAGTTTAAGACTAGATTAA+TGG - chr4_1:51907099-51907118 None:intergenic 20.0%
!! CATTTATCATGATATTGTTA+TGG + chr4_1:51907708-51907727 Msa0554530:five_prime_UTR 20.0%
!!! TTTTATTCCATATGTCTATT+TGG + chr4_1:51907927-51907946 Msa0554530:five_prime_UTR 20.0%
!! ATACAATGAACAATAATGTT+GGG + chr4_1:51908515-51908534 Msa0554530:exon 20.0%
!! AATAATAGAGTAGTTAATGA+AGG + chr4_1:51908589-51908608 Msa0554530:CDS 20.0%
!! ATAATAGAGTAGTTAATGAA+GGG + chr4_1:51908590-51908609 Msa0554530:CDS 20.0%
!! AATTAATATGCACAGAAATA+TGG - chr4_1:51909226-51909245 None:intergenic 20.0%
!! CATATTAATTATTGCTCATT+TGG + chr4_1:51909236-51909255 Msa0554530:intron 20.0%
!!! ATTTTTTAGTCAAACCTATT+CGG + chr4_1:51909355-51909374 Msa0554530:CDS 20.0%
!!! ATGATTTTGAGTTTATGAAT+GGG + chr4_1:51909513-51909532 Msa0554530:intron 20.0%
!! AAAATAAAACATGATGTTGT+AGG - chr4_1:51909560-51909579 None:intergenic 20.0%
!!! AACATCATGTTTTATTTTGT+GGG + chr4_1:51909562-51909581 Msa0554530:intron 20.0%
!! ATTGATACTTACATGAATAA+AGG - chr4_1:51909651-51909670 None:intergenic 20.0%
!! TATTCATGTAAGTATCAATT+AGG + chr4_1:51909652-51909671 Msa0554530:intron 20.0%
!! ATTAATTAATTGAACGAGTT+AGG + chr4_1:51910161-51910180 Msa0554530:intron 20.0%
!!! AGAATCGTAGTTTTATATAA+TGG + chr4_1:51910436-51910455 Msa0554530:intron 20.0%
!! ATTATTCTTCTCTTCTTTAT+TGG - chr4_1:51910556-51910575 None:intergenic 20.0%
!! AATAAAGAAGAGAAGAATAA+TGG + chr4_1:51910555-51910574 Msa0554530:intron 20.0%
!! ATAAAGAAGAGAAGAATAAT+GGG + chr4_1:51910556-51910575 Msa0554530:intron 20.0%
!! AATAGAATGTTAAAATGCTA+AGG - chr4_1:51910701-51910720 None:intergenic 20.0%
!! TTAGATGAATGAATAATTAG+GGG - chr4_1:51910891-51910910 None:intergenic 20.0%
!! ATATGTCAAAAAAACAGAAA+AGG - chr4_1:51911140-51911159 None:intergenic 20.0%
!! ATGTTAGTTATAAAATGACT+GGG - chr4_1:51911899-51911918 None:intergenic 20.0%
!!! TGTTATCTGTATTTTTTATC+AGG + chr4_1:51912208-51912227 Msa0554530:intron 20.0%
!! AATTTCTATAACTCAATTGA+TGG + chr4_1:51913108-51913127 Msa0554530:intron 20.0%
!!! TGGCAAAATATAATTTTCTT+AGG - chr4_1:51913195-51913214 None:intergenic 20.0%
!!! AGAAAATTATATTTTGCCAT+TGG + chr4_1:51913196-51913215 Msa0554530:intron 20.0%
!! AGTATAGAATATAGATTACA+AGG - chr4_1:51913239-51913258 None:intergenic 20.0%
!! TATATTCTATACTCATTTCT+GGG + chr4_1:51913246-51913265 Msa0554530:intron 20.0%
!!! TTCTTTATTTTCTTCTTCTT+TGG - chr4_1:51913634-51913653 None:intergenic 20.0%
!! TGTAATATCAACAGTTAATA+TGG + chr4_1:51914067-51914086 Msa0554530:three_prime_UTR 20.0%
!! CCATATAAGAAAATTTTGTG+GGG - chr4_1:51906735-51906754 None:intergenic 25.0%
! TAAAAAATCATCATACTCAG+AGG - chr4_1:51906988-51907007 None:intergenic 25.0%
! TCATATAGAGACTAAATTGA+TGG - chr4_1:51907171-51907190 None:intergenic 25.0%
! AAACATGTCAAAATCAATTC+TGG - chr4_1:51907294-51907313 None:intergenic 25.0%
! ATCATGATATTGTTATGGAA+TGG + chr4_1:51907713-51907732 Msa0554530:five_prime_UTR 25.0%
!! CTGTACTTATCTAAACTTTT+TGG + chr4_1:51907890-51907909 Msa0554530:five_prime_UTR 25.0%
! ATTCAATCCAAATAGACATA+TGG - chr4_1:51907937-51907956 None:intergenic 25.0%
!!! AGTGTGGTTGATAATAATAT+AGG + chr4_1:51908489-51908508 Msa0554530:five_prime_UTR 25.0%
! GATACAATGAACAATAATGT+TGG + chr4_1:51908514-51908533 Msa0554530:exon 25.0%
! AAATGACACTAGATTTAGTA+AGG + chr4_1:51908636-51908655 Msa0554530:CDS 25.0%
!! GAACTTTTATTGATGTAACA+GGG - chr4_1:51908774-51908793 None:intergenic 25.0%
!! AGAACTTTTATTGATGTAAC+AGG - chr4_1:51908775-51908794 None:intergenic 25.0%
!!! CATGATTTTGAGTTTATGAA+TGG + chr4_1:51909512-51909531 Msa0554530:intron 25.0%
!!! CAACATCATGTTTTATTTTG+TGG + chr4_1:51909561-51909580 Msa0554530:intron 25.0%
! TTAATATTTGAAGACTGAAC+TGG - chr4_1:51909621-51909640 None:intergenic 25.0%
! ATCATTCCTTTATTCATGTA+AGG + chr4_1:51909642-51909661 Msa0554530:intron 25.0%
! ATTGATCCTTACATGAATAA+AGG - chr4_1:51909687-51909706 None:intergenic 25.0%
! TATTCATGTAAGGATCAATT+AGG + chr4_1:51909688-51909707 Msa0554530:intron 25.0%
! ATTCATGTAAGGATCAATTA+GGG + chr4_1:51909689-51909708 Msa0554530:intron 25.0%
! TTGGATATATGATTTCACTA+AGG - chr4_1:51909831-51909850 None:intergenic 25.0%
! ATCATGCTACAAAAATAGAT+TGG - chr4_1:51909850-51909869 None:intergenic 25.0%
! ATTAACTCATCAACAATCAA+TGG + chr4_1:51909912-51909931 Msa0554530:intron 25.0%
! AAGTATATTAACCCATGTTA+AGG - chr4_1:51909942-51909961 None:intergenic 25.0%
!!! CATAAAATCATCACTTTTGA+TGG - chr4_1:51910376-51910395 None:intergenic 25.0%
!! CATCAAAAGTGATGATTTTA+TGG + chr4_1:51910374-51910393 Msa0554530:intron 25.0%
! CATACAATTAAACTTCCTAT+TGG - chr4_1:51910502-51910521 None:intergenic 25.0%
! ATTGTATGAGTGGTTATTTA+TGG + chr4_1:51910514-51910533 Msa0554530:intron 25.0%
! AATAAGATGTCTGATATAGA+TGG + chr4_1:51911315-51911334 Msa0554530:CDS 25.0%
! TTATAAAATGACTGGGATTT+GGG - chr4_1:51911892-51911911 None:intergenic 25.0%
! CATGTTAGTTATAAAATGAC+TGG - chr4_1:51911900-51911919 None:intergenic 25.0%
!!! ATGTCTTAGTTATTTTTCAG+TGG + chr4_1:51911940-51911959 Msa0554530:intron 25.0%
!!! TACTATTATTTTGCACAGTT+TGG - chr4_1:51912472-51912491 None:intergenic 25.0%
! GAAAGTAATGGTACAAATTA+TGG + chr4_1:51912731-51912750 Msa0554530:CDS 25.0%
!!! ATGTGGATTTAGTTAGTTTT+GGG + chr4_1:51913046-51913065 Msa0554530:intron 25.0%
! ATTATCAGAATCTTCCATTT+AGG - chr4_1:51913149-51913168 None:intergenic 25.0%
! CTATATTCTATACTCATTTC+TGG + chr4_1:51913245-51913264 Msa0554530:intron 25.0%
! GCAGTTGTATCAATTTAATT+TGG + chr4_1:51913283-51913302 Msa0554530:intron 25.0%
! GATGATCTTAAATATTGAAC+AGG - chr4_1:51913404-51913423 None:intergenic 25.0%
! TATCTAACCTGAAAAACAAA+AGG - chr4_1:51913426-51913445 None:intergenic 25.0%
!!! ATAATGATCAGCATTTTGAT+TGG - chr4_1:51913707-51913726 None:intergenic 25.0%
! TATGAACATAAAAACTCCAA+TGG + chr4_1:51913900-51913919 Msa0554530:three_prime_UTR 25.0%
AAAAAGGAAAAAAGCTTGAC+TGG - chr4_1:51906712-51906731 None:intergenic 30.0%
! AGAAAATTTTGTGGGGAAAA+AGG - chr4_1:51906728-51906747 None:intergenic 30.0%
! CCCCACAAAATTTTCTTATA+TGG + chr4_1:51906732-51906751 Msa0554530:five_prime_UTR 30.0%
CTTGAAGTTAGAATCAATTC+TGG - chr4_1:51907347-51907366 None:intergenic 30.0%
AACGTAAAGTGGTTTATGTT+TGG - chr4_1:51907443-51907462 None:intergenic 30.0%
GAACCAAACATACACTAAAT+TGG + chr4_1:51907516-51907535 Msa0554530:five_prime_UTR 30.0%
TCTCCAATTTAGTGTATGTT+TGG - chr4_1:51907522-51907541 None:intergenic 30.0%
! TTGAGCTTTTCATTTCTATC+TGG + chr4_1:51907843-51907862 Msa0554530:five_prime_UTR 30.0%
! TGAGCTTTTCATTTCTATCT+GGG + chr4_1:51907844-51907863 Msa0554530:five_prime_UTR 30.0%
GTCTGAAAAATATTTGAGAG+AGG + chr4_1:51907971-51907990 Msa0554530:five_prime_UTR 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr4_1:51908024-51908043 None:intergenic 30.0%
TTGTTAACACTTTGTCTAGT+TGG - chr4_1:51908184-51908203 None:intergenic 30.0%
! ATAAGTTTGTTTCGATCTCT+TGG + chr4_1:51908269-51908288 Msa0554530:five_prime_UTR 30.0%
! TAAGTTTGTTTCGATCTCTT+GGG + chr4_1:51908270-51908289 Msa0554530:five_prime_UTR 30.0%
TAATGTTGGGAAACAAAGTT+TGG + chr4_1:51908528-51908547 Msa0554530:CDS 30.0%
TTTAGTAAGGTAACCAAAGA+TGG + chr4_1:51908649-51908668 Msa0554530:CDS 30.0%
! AATTTTTCCCAGTATGTAAC+TGG - chr4_1:51908748-51908767 None:intergenic 30.0%
TACATCAATAAAAGTTCTGC+TGG + chr4_1:51908777-51908796 Msa0554530:CDS 30.0%
ACCAGATACTTAAAGTTCAA+AGG - chr4_1:51908904-51908923 None:intergenic 30.0%
! TTTTTGTATCTCAATCACGT+TGG - chr4_1:51908949-51908968 None:intergenic 30.0%
AGAAATATGGTGCAAAGTTT+GGG - chr4_1:51909213-51909232 None:intergenic 30.0%
!!! TTATTGCTCATTTGGTGTTT+TGG + chr4_1:51909244-51909263 Msa0554530:intron 30.0%
ATGTCATGTCATGATTCTAT+GGG + chr4_1:51909297-51909316 Msa0554530:CDS 30.0%
GTGTTTAAGTGTTTGTCAAA+AGG + chr4_1:51909324-51909343 Msa0554530:CDS 30.0%
GTAGGAACTATTGGTATATT+TGG - chr4_1:51909542-51909561 None:intergenic 30.0%
! ATTTGCTAGAAAGGAAGTAA+TGG - chr4_1:51909736-51909755 None:intergenic 30.0%
!! AACTTCGAAATTTGCTAGAA+AGG - chr4_1:51909745-51909764 None:intergenic 30.0%
TGATTTCACTAAGGAAGTAA+TGG - chr4_1:51909822-51909841 None:intergenic 30.0%
TTTCTCAGTCTAATGATAGT+GGG + chr4_1:51909960-51909979 Msa0554530:intron 30.0%
! TTCTTGACTTTGCGAATTTT+CGG - chr4_1:51910006-51910025 None:intergenic 30.0%
AAACTAACAGTGATGACATT+CGG - chr4_1:51910276-51910295 None:intergenic 30.0%
!!! ATCACTGTTAGTTTTTAGTG+TGG + chr4_1:51910282-51910301 Msa0554530:intron 30.0%
AGGAAGTTTAATTGTATGAG+TGG + chr4_1:51910504-51910523 Msa0554530:intron 30.0%
TGATTCATACAGCAAGTAAA+TGG - chr4_1:51910639-51910658 None:intergenic 30.0%
TGAAAACATTAGCAGTATGT+GGG + chr4_1:51911052-51911071 Msa0554530:CDS 30.0%
AGTAACTAGGTGGTTAATTT+GGG - chr4_1:51911185-51911204 None:intergenic 30.0%
AAGTAACTAGGTGGTTAATT+TGG - chr4_1:51911186-51911205 None:intergenic 30.0%
ATATCATCTGGAAAGTAACT+AGG - chr4_1:51911198-51911217 None:intergenic 30.0%
TTTCCAGATGATATTGCAAT+GGG + chr4_1:51911204-51911223 Msa0554530:intron 30.0%
TATTGCAATGGGTAAAGATT+TGG + chr4_1:51911215-51911234 Msa0554530:CDS 30.0%
AAGAGGACAGTGATAAAATT+AGG + chr4_1:51911388-51911407 Msa0554530:CDS 30.0%
! GAAAATCAGGGTACAAATTT+TGG + chr4_1:51911417-51911436 Msa0554530:CDS 30.0%
AGAGATTTGAACACTTCAAA+TGG + chr4_1:51911474-51911493 Msa0554530:CDS 30.0%
! AACACTTCAAATGGTTTTTC+TGG + chr4_1:51911483-51911502 Msa0554530:CDS 30.0%
! CTTTCAAATTTGCTCTTACT+TGG - chr4_1:51911655-51911674 None:intergenic 30.0%
TTGATGCATAAGCATTACAT+TGG + chr4_1:51911700-51911719 Msa0554530:intron 30.0%
GTTATAAAATGACTGGGATT+TGG - chr4_1:51911893-51911912 None:intergenic 30.0%
TTGAAGACATTTGATATGCT+GGG - chr4_1:51912063-51912082 None:intergenic 30.0%
!!! ATTTTTTATCAGGCTCAAAC+TGG + chr4_1:51912218-51912237 Msa0554530:intron 30.0%
! GGTTTCTTGTCAAAATTTTC+GGG - chr4_1:51912407-51912426 None:intergenic 30.0%
! GGGTTTCTTGTCAAAATTTT+CGG - chr4_1:51912408-51912427 None:intergenic 30.0%
TGTACATTATCAAATGCGTT+TGG + chr4_1:51912698-51912717 Msa0554530:CDS 30.0%
GGTACAAATTATGGTTTGAA+TGG + chr4_1:51912740-51912759 Msa0554530:CDS 30.0%
GACAATCAGAATGATAAATG+TGG + chr4_1:51912817-51912836 Msa0554530:CDS 30.0%
GCAATTGAGAGAATAAACAT+TGG + chr4_1:51912878-51912897 Msa0554530:CDS 30.0%
! CTTTTGACGAAATTTTGTCA+AGG - chr4_1:51912945-51912964 None:intergenic 30.0%
AGAAAGATGCTTTGACAAAA+AGG + chr4_1:51912970-51912989 Msa0554530:CDS 30.0%
!!! GGTAATCTATTTTTATCACC+TGG + chr4_1:51912991-51913010 Msa0554530:intron 30.0%
!! CATGTGGATTTAGTTAGTTT+TGG + chr4_1:51913045-51913064 Msa0554530:intron 30.0%
ACAGAGAGATAAAAAACCAA+TGG - chr4_1:51913215-51913234 None:intergenic 30.0%
!!! AGATCATCCTTTTGTTTTTC+AGG + chr4_1:51913416-51913435 Msa0554530:intron 30.0%
ATATCACAGCAGGAAAAAAT+TGG + chr4_1:51913443-51913462 Msa0554530:CDS 30.0%
TAAATACAAGCATACAAGCA+TGG - chr4_1:51913525-51913544 None:intergenic 30.0%
CAGTACTTAATACTTAGACA+AGG - chr4_1:51913573-51913592 None:intergenic 30.0%
CTTGTCTAAGTATTAAGTAC+TGG + chr4_1:51913571-51913590 Msa0554530:intron 30.0%
AGAAGAAAATAAAGAAAGCG+AGG + chr4_1:51913638-51913657 Msa0554530:CDS 30.0%
!!! CATTTTGATTGGTATTGTTG+TGG - chr4_1:51913696-51913715 None:intergenic 30.0%
TAATAGAAGAATCTGTGAGT+AGG + chr4_1:51913801-51913820 Msa0554530:three_prime_UTR 30.0%
! AATGCTCTAGATTCAGTTTA+TGG + chr4_1:51913876-51913895 Msa0554530:three_prime_UTR 30.0%
AGTGATTGTGTATCAAAATC+AGG + chr4_1:51913979-51913998 Msa0554530:three_prime_UTR 30.0%
GTGATTGTGTATCAAAATCA+GGG + chr4_1:51913980-51913999 Msa0554530:three_prime_UTR 30.0%
CTTAATAGCAGAGACTGAAA+TGG + chr4_1:51907213-51907232 Msa0554530:five_prime_UTR 35.0%
GTTAACGTGGAATCAAACAT+AGG - chr4_1:51907266-51907285 None:intergenic 35.0%
GAAGTTAGAATCAATTCTGG+AGG - chr4_1:51907344-51907363 None:intergenic 35.0%
! AAAGTGAGTTGAACGTAAAG+TGG - chr4_1:51907454-51907473 None:intergenic 35.0%
AAGCTATCTTAGAGAGCTTA+AGG - chr4_1:51908048-51908067 None:intergenic 35.0%
! CTTTGTCGTGATTCTAAAAG+AGG - chr4_1:51908323-51908342 None:intergenic 35.0%
!!! CTCTTTTAGAATCACGACAA+AGG + chr4_1:51908321-51908340 Msa0554530:intron 35.0%
TATCCAGTTGACTGATAGAT+AGG + chr4_1:51908350-51908369 Msa0554530:intron 35.0%
ATCCAGTTGACTGATAGATA+GGG + chr4_1:51908351-51908370 Msa0554530:intron 35.0%
TTGTGTTTGCAGAACTTGAT+GGG + chr4_1:51908374-51908393 Msa0554530:intron 35.0%
AATCCACAATTCACTCAACA+AGG + chr4_1:51908418-51908437 Msa0554530:five_prime_UTR 35.0%
ATCCACAATTCACTCAACAA+GGG + chr4_1:51908419-51908438 Msa0554530:five_prime_UTR 35.0%
ACTCAAAAAACAACAAGGTG+AGG - chr4_1:51908472-51908491 None:intergenic 35.0%
!!! ACCTTGTTGTTTTTTGAGTG+TGG + chr4_1:51908473-51908492 Msa0554530:five_prime_UTR 35.0%
ACCACACTCAAAAAACAACA+AGG - chr4_1:51908477-51908496 None:intergenic 35.0%
TAACCAAAGATGGAAACAGT+GGG + chr4_1:51908659-51908678 Msa0554530:CDS 35.0%
TCGTAATCCAGTTACATACT+GGG + chr4_1:51908738-51908757 Msa0554530:CDS 35.0%
ATCAATAAAAGTTCTGCTGG+TGG + chr4_1:51908780-51908799 Msa0554530:CDS 35.0%
! TGTGCTTTGTTAAGGAATTG+TGG + chr4_1:51908832-51908851 Msa0554530:CDS 35.0%
TTAAGGAATTGTGGCTATGA+AGG + chr4_1:51908841-51908860 Msa0554530:CDS 35.0%
GCCTTTGAACTTTAAGTATC+TGG + chr4_1:51908900-51908919 Msa0554530:intron 35.0%
AACGGTGACATATATCAAAC+TGG - chr4_1:51909000-51909019 None:intergenic 35.0%
AGTTTGATATATGTCACCGT+TGG + chr4_1:51908999-51909018 Msa0554530:intron 35.0%
!! GCATTGACTGTAAATACCAA+CGG - chr4_1:51909018-51909037 None:intergenic 35.0%
ACAAGATCAATGTGATTTCC+TGG - chr4_1:51909081-51909100 None:intergenic 35.0%
! GATAGCTATGCCTTTTGTAA+CGG + chr4_1:51909110-51909129 Msa0554530:CDS 35.0%
! ATAGCTATGCCTTTTGTAAC+GGG + chr4_1:51909111-51909130 Msa0554530:CDS 35.0%
CAGAAATATGGTGCAAAGTT+TGG - chr4_1:51909214-51909233 None:intergenic 35.0%
GATGTCATGTCATGATTCTA+TGG + chr4_1:51909296-51909315 Msa0554530:CDS 35.0%
! TTTTAGTCAAACCTATTCGG+AGG + chr4_1:51909358-51909377 Msa0554530:CDS 35.0%
ATGTAAAGCAACTCACACTA+TGG - chr4_1:51909425-51909444 None:intergenic 35.0%
TTGCTTTACATTTCTGTCTC+AGG + chr4_1:51909434-51909453 Msa0554530:intron 35.0%
CATGATGTTGTAGGAACTAT+TGG - chr4_1:51909551-51909570 None:intergenic 35.0%
ATCAATGGCATTCCTTAACA+TGG + chr4_1:51909927-51909946 Msa0554530:intron 35.0%
TCAATGGCATTCCTTAACAT+GGG + chr4_1:51909928-51909947 Msa0554530:intron 35.0%
CTTTCTCAGTCTAATGATAG+TGG + chr4_1:51909959-51909978 Msa0554530:intron 35.0%
! TCTTGACTTTGCGAATTTTC+GGG - chr4_1:51910005-51910024 None:intergenic 35.0%
TGTGCATTTGACAACAATAC+TGG + chr4_1:51910031-51910050 Msa0554530:CDS 35.0%
AGCAGTGATGAGAATGATTA+TGG + chr4_1:51910055-51910074 Msa0554530:CDS 35.0%
ACATGATATTGCTCGAAAAG+TGG - chr4_1:51910206-51910225 None:intergenic 35.0%
GTAATTATTGTCAGGAACTG+AGG + chr4_1:51910737-51910756 Msa0554530:intron 35.0%
ACTGAGGATAGAATGATGAA+TGG + chr4_1:51910753-51910772 Msa0554530:intron 35.0%
CCATGAACTCTACACAAAAT+AGG - chr4_1:51910925-51910944 None:intergenic 35.0%
! CCTATTTTGTGTAGAGTTCA+TGG + chr4_1:51910922-51910941 Msa0554530:intron 35.0%
! CACATACTGCTAATGTTTTC+AGG - chr4_1:51911053-51911072 None:intergenic 35.0%
CTGAAAACATTAGCAGTATG+TGG + chr4_1:51911051-51911070 Msa0554530:CDS 35.0%
! TTCATGGAACTCTTTTTCTG+TGG - chr4_1:51911084-51911103 None:intergenic 35.0%
! CAAGATGATCAATTGGTTCA+TGG - chr4_1:51911100-51911119 None:intergenic 35.0%
CATGAACCAATTGATCATCT+TGG + chr4_1:51911098-51911117 Msa0554530:CDS 35.0%
AACAGAAAAGGATACTACCA+AGG - chr4_1:51911128-51911147 None:intergenic 35.0%
CTTTCCAGATGATATTGCAA+TGG + chr4_1:51911203-51911222 Msa0554530:intron 35.0%
TTACCCATTGCAATATCATC+TGG - chr4_1:51911210-51911229 None:intergenic 35.0%
AATGGGTAAAGATTTGGCTA+TGG + chr4_1:51911221-51911240 Msa0554530:CDS 35.0%
ATGGGTAAAGATTTGGCTAT+GGG + chr4_1:51911222-51911241 Msa0554530:CDS 35.0%
TCTAACAATCCAATGCGTAA+AGG + chr4_1:51911288-51911307 Msa0554530:CDS 35.0%
CTAACAATCCAATGCGTAAA+GGG + chr4_1:51911289-51911308 Msa0554530:CDS 35.0%
TAACAATCCAATGCGTAAAG+GGG + chr4_1:51911290-51911309 Msa0554530:CDS 35.0%
TTATTAACCCCTTTACGCAT+TGG - chr4_1:51911300-51911319 None:intergenic 35.0%
! TCTCTGTGAAAAAGTACAAC+TGG + chr4_1:51911365-51911384 Msa0554530:CDS 35.0%
! TGAAAAAGTACAACTGGAAG+AGG + chr4_1:51911371-51911390 Msa0554530:CDS 35.0%
CAGTGATAAAATTAGGATGC+AGG + chr4_1:51911395-51911414 Msa0554530:CDS 35.0%
AATTAGGATGCAGGAAAATC+AGG + chr4_1:51911404-51911423 Msa0554530:CDS 35.0%
ATTAGGATGCAGGAAAATCA+GGG + chr4_1:51911405-51911424 Msa0554530:CDS 35.0%
TCCATCACTTGAACTAACAT+TGG + chr4_1:51911545-51911564 Msa0554530:CDS 35.0%
TCCAATGTTAGTTCAAGTGA+TGG - chr4_1:51911549-51911568 None:intergenic 35.0%
CACTTGAACTAACATTGGAA+AGG + chr4_1:51911550-51911569 Msa0554530:CDS 35.0%
TGAACTAACATTGGAAAGGA+TGG + chr4_1:51911554-51911573 Msa0554530:CDS 35.0%
GAACTAACATTGGAAAGGAT+GGG + chr4_1:51911555-51911574 Msa0554530:CDS 35.0%
!! TTGAAAGCATTACCACCTAT+TGG + chr4_1:51911668-51911687 Msa0554530:intron 35.0%
GCTGTATTATATCTGCAGAA+TGG - chr4_1:51911766-51911785 None:intergenic 35.0%
TGAAGACATTTGATATGCTG+GGG - chr4_1:51912062-51912081 None:intergenic 35.0%
GTTGAAGACATTTGATATGC+TGG - chr4_1:51912064-51912083 None:intergenic 35.0%
! ACACACTATTTTCCAGCAAT+TGG - chr4_1:51912156-51912175 None:intergenic 35.0%
TAGACCCAAATCTCAATGTT+TGG + chr4_1:51912175-51912194 Msa0554530:intron 35.0%
AGACCCAAATCTCAATGTTT+GGG + chr4_1:51912176-51912195 Msa0554530:intron 35.0%
TTGCCCAAACATTGAGATTT+GGG - chr4_1:51912182-51912201 None:intergenic 35.0%
TTTGCCCAAACATTGAGATT+TGG - chr4_1:51912183-51912202 None:intergenic 35.0%
TTGTGTGTTGTCTCTGTAAT+TGG - chr4_1:51912287-51912306 None:intergenic 35.0%
!! TTCCATTAGACTGCTGATTT+GGG - chr4_1:51912334-51912353 None:intergenic 35.0%
GATATGTATTAGTGGAAGTC+AGG - chr4_1:51912373-51912392 None:intergenic 35.0%
CGTGCTAAGATATGTATTAG+TGG - chr4_1:51912381-51912400 None:intergenic 35.0%
GTAAGAGATCATGAACTGAT+TGG - chr4_1:51912649-51912668 None:intergenic 35.0%
ACATTATCAAATGCGTTTGG+AGG + chr4_1:51912701-51912720 Msa0554530:CDS 35.0%
CATTATCAAATGCGTTTGGA+GGG + chr4_1:51912702-51912721 Msa0554530:CDS 35.0%
TTTGTACCATTACTTTCTGC+TGG - chr4_1:51912728-51912747 None:intergenic 35.0%
GAGAGAATAAACATTGGAAG+TGG + chr4_1:51912884-51912903 Msa0554530:CDS 35.0%
ATGAAGAACGAATTGCATTG+AGG + chr4_1:51912912-51912931 Msa0554530:CDS 35.0%
TGAAGAACGAATTGCATTGA+GGG + chr4_1:51912913-51912932 Msa0554530:CDS 35.0%
CTGAAGATCATAATAGCATG+TGG + chr4_1:51913029-51913048 Msa0554530:intron 35.0%
TCAGAATCTTCCATTTAGGT+GGG - chr4_1:51913145-51913164 None:intergenic 35.0%
ATCAGAATCTTCCATTTAGG+TGG - chr4_1:51913146-51913165 None:intergenic 35.0%
AACATTACCGACATGAACAT+GGG - chr4_1:51913928-51913947 None:intergenic 35.0%
AAACATTACCGACATGAACA+TGG - chr4_1:51913929-51913948 None:intergenic 35.0%
GCAGAATATAGACATGAACA+AGG - chr4_1:51913955-51913974 None:intergenic 35.0%
! CCTCATACTTTAGTTTCTAG+AGG - chr4_1:51914035-51914054 None:intergenic 35.0%
! CCTCTAGAAACTAAAGTATG+AGG + chr4_1:51914032-51914051 Msa0554530:three_prime_UTR 35.0%
GTTTGATTCCACGTTAACAG+CGG + chr4_1:51907268-51907287 Msa0554530:five_prime_UTR 40.0%
!!! ACCTGTCATTTTAGTGCATC+TGG + chr4_1:51907609-51907628 Msa0554530:five_prime_UTR 40.0%
ACCAGATGCACTAAAATGAC+AGG - chr4_1:51907613-51907632 None:intergenic 40.0%
!! AGTGCATCTGGTGTTATGTA+AGG + chr4_1:51907621-51907640 Msa0554530:five_prime_UTR 40.0%
AAAGCTTCTGTCTTAGCACA+AGG - chr4_1:51907755-51907774 None:intergenic 40.0%
! TGCTAAGACAGAAGCTTTGA+GGG + chr4_1:51907757-51907776 Msa0554530:five_prime_UTR 40.0%
AATGAAACGACAAGCTGTTG+CGG - chr4_1:51907793-51907812 None:intergenic 40.0%
TTTCATTTCTATCTGGGTGC+TGG + chr4_1:51907850-51907869 Msa0554530:five_prime_UTR 40.0%
AACCCTATCTATCAGTCAAC+TGG - chr4_1:51908356-51908375 None:intergenic 40.0%
GTTGTGTTTGCAGAACTTGA+TGG + chr4_1:51908373-51908392 Msa0554530:intron 40.0%
TCCACAATTCACTCAACAAG+GGG + chr4_1:51908420-51908439 Msa0554530:five_prime_UTR 40.0%
AATTCACTCAACAAGGGGAT+TGG + chr4_1:51908425-51908444 Msa0554530:five_prime_UTR 40.0%
ATTCACTCAACAAGGGGATT+GGG + chr4_1:51908426-51908445 Msa0554530:five_prime_UTR 40.0%
GTAACCAAAGATGGAAACAG+TGG + chr4_1:51908658-51908677 Msa0554530:CDS 40.0%
!! GATCGATTCGAATCAATGAG+AGG + chr4_1:51908689-51908708 Msa0554530:CDS 40.0%
TATGTAACTGGATTACGAGG+TGG - chr4_1:51908736-51908755 None:intergenic 40.0%
CAGTATGTAACTGGATTACG+AGG - chr4_1:51908739-51908758 None:intergenic 40.0%
CTCGTAATCCAGTTACATAC+TGG + chr4_1:51908737-51908756 Msa0554530:CDS 40.0%
! ACGTTGTGTGTGCTTTGTTA+AGG + chr4_1:51908824-51908843 Msa0554530:CDS 40.0%
!! ACAGTCAATGCTGTTTCCAA+TGG + chr4_1:51909027-51909046 Msa0554530:intron 40.0%
TGTGATTTCCTGGATCTTCT+AGG - chr4_1:51909071-51909090 None:intergenic 40.0%
!! ATGCCTTTTGTAACGGGAAT+AGG + chr4_1:51909117-51909136 Msa0554530:CDS 40.0%
AGACCTATTCCCGTTACAAA+AGG - chr4_1:51909123-51909142 None:intergenic 40.0%
GAATGGCACTTACTAATCAC+AGG - chr4_1:51909186-51909205 None:intergenic 40.0%
! TGCAAAGTTTGGGTTTGGAA+TGG - chr4_1:51909203-51909222 None:intergenic 40.0%
! TATGGTGCAAAGTTTGGGTT+TGG - chr4_1:51909208-51909227 None:intergenic 40.0%
TTAAGTTCGTTCCTCCGAAT+AGG - chr4_1:51909372-51909391 None:intergenic 40.0%
GGAACGAACTTAAAAACCTC+TGG + chr4_1:51909379-51909398 Msa0554530:CDS 40.0%
AAAACCTCTGGCAACATGTT+TGG + chr4_1:51909391-51909410 Msa0554530:CDS 40.0%
!! ATGTTGTTTCCCAGCTCATT+TGG + chr4_1:51909478-51909497 Msa0554530:intron 40.0%
CACTTTGTTCCAAATGAGCT+GGG - chr4_1:51909490-51909509 None:intergenic 40.0%
ACACTTTGTTCCAAATGAGC+TGG - chr4_1:51909491-51909510 None:intergenic 40.0%
!! AATGATAGTGGGAGTGAAAG+TGG + chr4_1:51909971-51909990 Msa0554530:CDS 40.0%
GAGAATGATTATGGAAGCAG+AGG + chr4_1:51910064-51910083 Msa0554530:CDS 40.0%
GTTCAAGATGGAAGTGACAA+TGG + chr4_1:51910094-51910113 Msa0554530:CDS 40.0%
!! CTCGAAAAGTGGCTTTAGAT+GGG - chr4_1:51910195-51910214 None:intergenic 40.0%
ATGGGATAGTTGACACCAAT+AGG + chr4_1:51910484-51910503 Msa0554530:intron 40.0%
! TAATGGGCATCCTTCTTTGT+TGG + chr4_1:51910572-51910591 Msa0554530:intron 40.0%
AATGGGCATCCTTCTTTGTT+GGG + chr4_1:51910573-51910592 Msa0554530:intron 40.0%
ATTAGGGGAAATCACAGTCT+AGG - chr4_1:51910876-51910895 None:intergenic 40.0%
GATTGATTAGGAGGTGAAAC+TGG - chr4_1:51910984-51911003 None:intergenic 40.0%
GCATCATGAGATTGATTAGG+AGG - chr4_1:51910993-51911012 None:intergenic 40.0%
! GGAGCATCATGAGATTGATT+AGG - chr4_1:51910996-51911015 None:intergenic 40.0%
GGCATACCAAGATGATCAAT+TGG - chr4_1:51911107-51911126 None:intergenic 40.0%
TTGATCATCTTGGTATGCCT+TGG + chr4_1:51911108-51911127 Msa0554530:intron 40.0%
TCATCTGGAAAGTAACTAGG+TGG - chr4_1:51911195-51911214 None:intergenic 40.0%
GATGGTATGCAGCACAATAA+AGG + chr4_1:51911333-51911352 Msa0554530:CDS 40.0%
AAATCTCTGCTTTCAGCATG+TGG - chr4_1:51911462-51911481 None:intergenic 40.0%
AAAGATGACGAACATGTCAC+AGG + chr4_1:51911585-51911604 Msa0554530:CDS 40.0%
TAATACAGCTTCTGCTTACC+AGG + chr4_1:51911777-51911796 Msa0554530:CDS 40.0%
GTCCTTACTTCTTCAATAGC+AGG + chr4_1:51911812-51911831 Msa0554530:intron 40.0%
CTCCTGCTATTGAAGAAGTA+AGG - chr4_1:51911817-51911836 None:intergenic 40.0%
! TTTGGTTTCAAAGAGCCTAG+CGG + chr4_1:51911980-51911999 Msa0554530:intron 40.0%
AGTGCATCTCAGATGGTAAA+AGG - chr4_1:51912086-51912105 None:intergenic 40.0%
TACAGTGACAAACAAATGCC+AGG + chr4_1:51912129-51912148 Msa0554530:intron 40.0%
! TATTTTCCAGCAATTGGTCC+TGG - chr4_1:51912150-51912169 None:intergenic 40.0%
AACTGAGCTATTGTCTAGTG+GGG - chr4_1:51912261-51912280 None:intergenic 40.0%
CAACTGAGCTATTGTCTAGT+GGG - chr4_1:51912262-51912281 None:intergenic 40.0%
!! TCCATTAGACTGCTGATTTG+GGG - chr4_1:51912333-51912352 None:intergenic 40.0%
! CTTCCATTAGACTGCTGATT+TGG - chr4_1:51912335-51912354 None:intergenic 40.0%
! ATAGTATTTCTGCACCTCAG+AGG + chr4_1:51912486-51912505 Msa0554530:CDS 40.0%
GAATATGCCGGAATCGTTAA+AGG + chr4_1:51912527-51912546 Msa0554530:CDS 40.0%
TTGTAATCACATTGCCGACA+AGG + chr4_1:51912610-51912629 Msa0554530:CDS 40.0%
TGTACATTGCTGAGCATCTT+TGG - chr4_1:51912684-51912703 None:intergenic 40.0%
AAAATCGTGATGTGACAGCT+GGG + chr4_1:51912840-51912859 Msa0554530:CDS 40.0%
CAGCAAACACATTATGAACC+AGG - chr4_1:51913012-51913031 None:intergenic 40.0%
TTGTTGAGATCCCACCTAAA+TGG + chr4_1:51913132-51913151 Msa0554530:intron 40.0%
! TTCAGGTTAGATATCACAGC+AGG + chr4_1:51913433-51913452 Msa0554530:intron 40.0%
GGAAAAAATTGGCAGATCAG+CGG + chr4_1:51913454-51913473 Msa0554530:CDS 40.0%
TTCTTTGGTATCAGACCTGA+GGG - chr4_1:51913619-51913638 None:intergenic 40.0%
AAGCGAGGAACTTGTATCTA+TGG + chr4_1:51913653-51913672 Msa0554530:CDS 40.0%
AGAAGAATCTGTGAGTAGGT+AGG + chr4_1:51913805-51913824 Msa0554530:three_prime_UTR 40.0%
ACATTACCGACATGAACATG+GGG - chr4_1:51913927-51913946 None:intergenic 40.0%
!! GCATCTGGTGTTATGTAAGG+TGG + chr4_1:51907624-51907643 Msa0554530:five_prime_UTR 45.0%
GTGCTAAGACAGAAGCTTTG+AGG + chr4_1:51907756-51907775 Msa0554530:five_prime_UTR 45.0%
TTTGCTCCCCATGATAAGTG+TGG + chr4_1:51908234-51908253 Msa0554530:five_prime_UTR 45.0%
TTGCTCCCCATGATAAGTGT+GGG + chr4_1:51908235-51908254 Msa0554530:five_prime_UTR 45.0%
GTTTGTTTCGATCTCTTGGG+TGG + chr4_1:51908273-51908292 Msa0554530:five_prime_UTR 45.0%
AAGAGGAAAGACCGATACCT+GGG - chr4_1:51908306-51908325 None:intergenic 45.0%
AAAGAGGAAAGACCGATACC+TGG - chr4_1:51908307-51908326 None:intergenic 45.0%
! TGGGTGAAGTGCTCATGATA+CGG + chr4_1:51908393-51908412 Msa0554530:five_prime_UTR 45.0%
TCCCCTTGTTGAGTGAATTG+TGG - chr4_1:51908424-51908443 None:intergenic 45.0%
CAACAAGGTGAGGACTTATC+AGG - chr4_1:51908462-51908481 None:intergenic 45.0%
AGAGTAGTTAATGAAGGGCC+AGG + chr4_1:51908595-51908614 Msa0554530:CDS 45.0%
GAGTAGTTAATGAAGGGCCA+GGG + chr4_1:51908596-51908615 Msa0554530:CDS 45.0%
CAACCCACTGTTTCCATCTT+TGG - chr4_1:51908665-51908684 None:intergenic 45.0%
!! AGATGGAAACAGTGGGTTGA+AGG + chr4_1:51908666-51908685 Msa0554530:CDS 45.0%
!! GATGGAAACAGTGGGTTGAA+GGG + chr4_1:51908667-51908686 Msa0554530:CDS 45.0%
TTTCCAATGGTCTTCAAGCG+TGG + chr4_1:51909040-51909059 Msa0554530:CDS 45.0%
TTTCCACGCTTGAAGACCAT+TGG - chr4_1:51909046-51909065 None:intergenic 45.0%
TGGAAAGTCCTAGAAGATCC+AGG + chr4_1:51909060-51909079 Msa0554530:CDS 45.0%
TTCTCCAAACATGTTGCCAG+AGG - chr4_1:51909398-51909417 None:intergenic 45.0%
AGAGGCTTGAGTGTTCAAGA+TGG + chr4_1:51910082-51910101 Msa0554530:CDS 45.0%
GATGGAAGTGACAATGGAAG+TGG + chr4_1:51910100-51910119 Msa0554530:CDS 45.0%
TGACAATGGAAGTGGAACTC+AGG + chr4_1:51910108-51910127 Msa0554530:CDS 45.0%
!! GCTCGAAAAGTGGCTTTAGA+TGG - chr4_1:51910196-51910215 None:intergenic 45.0%
CTATGTTAACCCTCTGTAGG+TGG - chr4_1:51910600-51910619 None:intergenic 45.0%
TCGCTATGTTAACCCTCTGT+AGG - chr4_1:51910603-51910622 None:intergenic 45.0%
ACAGAGGGTTAACATAGCGA+AGG + chr4_1:51910603-51910622 Msa0554530:intron 45.0%
TAGGAGGTGAAACTGGATGA+GGG - chr4_1:51910977-51910996 None:intergenic 45.0%
TTAGGAGGTGAAACTGGATG+AGG - chr4_1:51910978-51910997 None:intergenic 45.0%
! AGGCTTTGTATGCACCACTT+GGG - chr4_1:51911033-51911052 None:intergenic 45.0%
! GGAACTCTTTTTCTGTGGCA+TGG - chr4_1:51911079-51911098 None:intergenic 45.0%
! GCAACAAAAGCATGCACTTG+AGG + chr4_1:51911260-51911279 Msa0554530:CDS 45.0%
GCTTACCAGGTAATGTTCTG+TGG + chr4_1:51911790-51911809 Msa0554530:intron 45.0%
AAGGACCACAGAACATTACC+TGG - chr4_1:51911798-51911817 None:intergenic 45.0%
ACACACTAAGTGCGAAGAAG+AGG + chr4_1:51912013-51912032 Msa0554530:intron 45.0%
CACACTAAGTGCGAAGAAGA+GGG + chr4_1:51912014-51912033 Msa0554530:intron 45.0%
ACACTAAGTGCGAAGAAGAG+GGG + chr4_1:51912015-51912034 Msa0554530:intron 45.0%
CAGGCTCAAACTGGAAATGT+AGG + chr4_1:51912227-51912246 Msa0554530:intron 45.0%
GCAACTGAGCTATTGTCTAG+TGG - chr4_1:51912263-51912282 None:intergenic 45.0%
!! ATTAGACTGCTGATTTGGGG+TGG - chr4_1:51912330-51912349 None:intergenic 45.0%
ACCCCAAATCAGCAGTCTAA+TGG + chr4_1:51912329-51912348 Msa0554530:CDS 45.0%
TCTTCCCAGGATGAATATGC+CGG + chr4_1:51912515-51912534 Msa0554530:CDS 45.0%
GATTCCGGCATATTCATCCT+GGG - chr4_1:51912522-51912541 None:intergenic 45.0%
CACCTGTCCTTTAACGATTC+CGG - chr4_1:51912537-51912556 None:intergenic 45.0%
GATGCTGAGTGTGCTCAATT+TGG - chr4_1:51912580-51912599 None:intergenic 45.0%
GAAAATCGTGATGTGACAGC+TGG + chr4_1:51912839-51912858 Msa0554530:CDS 45.0%
AGAACGAATTGCATTGAGGG+AGG + chr4_1:51912916-51912935 Msa0554530:CDS 45.0%
ATGCTCAGTGCTCAAGTCAA+TGG + chr4_1:51913323-51913342 Msa0554530:intron 45.0%
ACAAATTGTCCCCTAACACG+TGG - chr4_1:51913480-51913499 None:intergenic 45.0%
TTCTGTCCATTCTTTCCCTC+AGG + chr4_1:51913601-51913620 Msa0554530:intron 45.0%
ATCAGACCTGAGGGAAAGAA+TGG - chr4_1:51913610-51913629 None:intergenic 45.0%
CTTCTTTGGTATCAGACCTG+AGG - chr4_1:51913620-51913639 None:intergenic 45.0%
AAGAAGCTAGATGCAGTTGC+TGG - chr4_1:51913745-51913764 None:intergenic 45.0%
AAAACTCCAAGCTTCTTCCG+AGG - chr4_1:51913778-51913797 None:intergenic 45.0%
AATGGACCCCATGTTCATGT+CGG + chr4_1:51913918-51913937 Msa0554530:three_prime_UTR 45.0%
AATTCTGGCCGCTGTTAACG+TGG - chr4_1:51907279-51907298 None:intergenic 50.0%
!! ATCTGGGTGCTGGAATTCAG+AGG + chr4_1:51907860-51907879 Msa0554530:five_prime_UTR 50.0%
! GGTGCTGGAATTCAGAGGTA+TGG + chr4_1:51907865-51907884 Msa0554530:five_prime_UTR 50.0%
TGCTCCCCATGATAAGTGTG+GGG + chr4_1:51908236-51908255 Msa0554530:five_prime_UTR 50.0%
ACACCCCCACACTTATCATG+GGG - chr4_1:51908243-51908262 None:intergenic 50.0%
CACACCCCCACACTTATCAT+GGG - chr4_1:51908244-51908263 None:intergenic 50.0%
TCACACCCCCACACTTATCA+TGG - chr4_1:51908245-51908264 None:intergenic 50.0%
AGAGGAAAGACCGATACCTG+GGG - chr4_1:51908305-51908324 None:intergenic 50.0%
!! CCAGTTGATGATTCAGACCC+TGG - chr4_1:51908616-51908635 None:intergenic 50.0%
CCAGGGTCTGAATCATCAAC+TGG + chr4_1:51908613-51908632 Msa0554530:CDS 50.0%
GTAACTGGATTACGAGGTGG+TGG - chr4_1:51908733-51908752 None:intergenic 50.0%
! TTGTAGTCTTGCGTGCTGAC+TGG - chr4_1:51910318-51910337 None:intergenic 50.0%
GTAGGTGGACCCAACAAAGA+AGG - chr4_1:51910585-51910604 None:intergenic 50.0%
TTTGTTGGGTCCACCTACAG+AGG + chr4_1:51910587-51910606 Msa0554530:intron 50.0%
TTGTTGGGTCCACCTACAGA+GGG + chr4_1:51910588-51910607 Msa0554530:intron 50.0%
! CAGGCTTTGTATGCACCACT+TGG - chr4_1:51911034-51911053 None:intergenic 50.0%
TGTGTGTGAATTTCGCCGCT+AGG - chr4_1:51911998-51912017 None:intergenic 50.0%
!! TGCGAAGAAGAGGGGTATTG+CGG + chr4_1:51912023-51912042 Msa0554530:intron 50.0%
ACATTTGATATGCTGGGGCG+CGG - chr4_1:51912057-51912076 None:intergenic 50.0%
CAAATGCCAGGACCAATTGC+TGG + chr4_1:51912141-51912160 Msa0554530:intron 50.0%
GACAAGAAACCCGAGTCTTC+TGG + chr4_1:51912416-51912435 Msa0554530:CDS 50.0%
AAGAAACCCGAGTCTTCTGG+AGG + chr4_1:51912419-51912438 Msa0554530:CDS 50.0%
AGAAACCCGAGTCTTCTGGA+GGG + chr4_1:51912420-51912439 Msa0554530:CDS 50.0%
TGGGAAGAAGTCTTCCTCTG+AGG - chr4_1:51912503-51912522 None:intergenic 50.0%
TCAGAGGAAGACTTCTTCCC+AGG + chr4_1:51912502-51912521 Msa0554530:CDS 50.0%
CGATTCCGGCATATTCATCC+TGG - chr4_1:51912523-51912542 None:intergenic 50.0%
TGCCGGAATCGTTAAAGGAC+AGG + chr4_1:51912532-51912551 Msa0554530:CDS 50.0%
ATCGTTAAAGGACAGGTGCG+AGG + chr4_1:51912539-51912558 Msa0554530:CDS 50.0%
AGTGCAGCTGAGAGTGATCA+CGG + chr4_1:51912764-51912783 Msa0554530:CDS 50.0%
GAGAGTGATCACGGGAGTAA+TGG + chr4_1:51912773-51912792 Msa0554530:CDS 50.0%
!! TGATCACGGGAGTAATGGAC+AGG + chr4_1:51912778-51912797 Msa0554530:CDS 50.0%
GCTTCTTTGCACGTTCACCT+CGG + chr4_1:51913758-51913777 Msa0554530:three_prime_UTR 50.0%
GACATGAACATGGGGTCCAT+TGG - chr4_1:51913919-51913938 None:intergenic 50.0%
GCTCCCCATGATAAGTGTGG+GGG + chr4_1:51908237-51908256 Msa0554530:five_prime_UTR 55.0%
GTGGAGTAAGCCCCAGGTAT+CGG + chr4_1:51908292-51908311 Msa0554530:intron 55.0%
ACTTGGGCACACGTGCTATC+AGG - chr4_1:51911017-51911036 None:intergenic 55.0%
TGATAGCACGTGTGCCCAAG+TGG + chr4_1:51911016-51911035 Msa0554530:CDS 55.0%
!! GCGAAGAAGAGGGGTATTGC+GGG + chr4_1:51912024-51912043 Msa0554530:intron 55.0%
CATTTGATATGCTGGGGCGC+GGG - chr4_1:51912056-51912075 None:intergenic 55.0%
CCTCGCAAGTGCATCTCAGA+TGG - chr4_1:51912093-51912112 None:intergenic 55.0%
! CCATCTGAGATGCACTTGCG+AGG + chr4_1:51912090-51912109 Msa0554530:intron 55.0%
CCAATCCCTCCAGAAGACTC+GGG - chr4_1:51912428-51912447 None:intergenic 55.0%
GCCAATCCCTCCAGAAGACT+CGG - chr4_1:51912429-51912448 None:intergenic 55.0%
!! CAGGTGCGAGGTTCTGAACA+AGG + chr4_1:51912551-51912570 Msa0554530:CDS 55.0%
! GAGATCCACTGCAGCCTTGT+CGG - chr4_1:51912627-51912646 None:intergenic 55.0%
GGAGGGCCAGCAGAAAGTAA+TGG + chr4_1:51912719-51912738 Msa0554530:CDS 55.0%
GTGCAGCTGAGAGTGATCAC+GGG + chr4_1:51912765-51912784 Msa0554530:CDS 55.0%
!! CACGGGAGTAATGGACAGGA+AGG + chr4_1:51912782-51912801 Msa0554530:CDS 55.0%
! GATGTGACAGCTGGGAGCAT+TGG + chr4_1:51912848-51912867 Msa0554530:CDS 55.0%
!! ACAGCTGGGAGCATTGGAGT+TGG + chr4_1:51912854-51912873 Msa0554530:CDS 55.0%
AGATCAGCGGCCACGTGTTA+GGG + chr4_1:51913467-51913486 Msa0554530:CDS 55.0%
CGTTCACCTCGGAAGAAGCT+TGG + chr4_1:51913769-51913788 Msa0554530:three_prime_UTR 55.0%
TCTTGGGTGGAGTAAGCCCC+AGG + chr4_1:51908286-51908305 Msa0554530:five_prime_UTR 60.0%
TGAGATGCACTTGCGAGGCG+TGG + chr4_1:51912095-51912114 Msa0554530:intron 60.0%
! CCCGAGTCTTCTGGAGGGAT+TGG + chr4_1:51912425-51912444 Msa0554530:CDS 60.0%
CATTGCCGACAAGGCTGCAG+TGG + chr4_1:51912619-51912638 Msa0554530:CDS 60.0%
CAGATCAGCGGCCACGTGTT+AGG + chr4_1:51913466-51913485 Msa0554530:CDS 60.0%
GATCAGCGGCCACGTGTTAG+GGG + chr4_1:51913468-51913487 Msa0554530:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51906699 51914171 51906699 ID=Msa0554530;Name=Msa0554530
chr4_1 mRNA 51906699 51914171 51906699 ID=Msa0554530-mRNA-1;Parent=Msa0554530;Name=Msa0554530-mRNA-1;_AED=0.12;_eAED=0.12;_QI=1607|1|1|1|0.81|0.75|12|452|795
chr4_1 exon 51906699 51906794 51906699 ID=Msa0554530-mRNA-1:exon:14919;Parent=Msa0554530-mRNA-1
chr4_1 exon 51906931 51908307 51906931 ID=Msa0554530-mRNA-1:exon:14920;Parent=Msa0554530-mRNA-1
chr4_1 exon 51908386 51908862 51908386 ID=Msa0554530-mRNA-1:exon:14921;Parent=Msa0554530-mRNA-1
chr4_1 exon 51909031 51909192 51909031 ID=Msa0554530-mRNA-1:exon:14922;Parent=Msa0554530-mRNA-1
chr4_1 exon 51909295 51909428 51909295 ID=Msa0554530-mRNA-1:exon:14923;Parent=Msa0554530-mRNA-1
chr4_1 exon 51909968 51910129 51909968 ID=Msa0554530-mRNA-1:exon:14924;Parent=Msa0554530-mRNA-1
chr4_1 exon 51910936 51911119 51910936 ID=Msa0554530-mRNA-1:exon:14925;Parent=Msa0554530-mRNA-1
chr4_1 exon 51911211 51911655 51911211 ID=Msa0554530-mRNA-1:exon:14926;Parent=Msa0554530-mRNA-1
chr4_1 exon 51911774 51911798 51911774 ID=Msa0554530-mRNA-1:exon:14927;Parent=Msa0554530-mRNA-1
chr4_1 exon 51912230 51912991 51912230 ID=Msa0554530-mRNA-1:exon:14928;Parent=Msa0554530-mRNA-1
chr4_1 exon 51913438 51913511 51913438 ID=Msa0554530-mRNA-1:exon:14929;Parent=Msa0554530-mRNA-1
chr4_1 exon 51913623 51914171 51913623 ID=Msa0554530-mRNA-1:exon:14930;Parent=Msa0554530-mRNA-1
chr4_1 five_prime_UTR 51906699 51906794 51906699 ID=Msa0554530-mRNA-1:five_prime_utr;Parent=Msa0554530-mRNA-1
chr4_1 five_prime_UTR 51906931 51908307 51906931 ID=Msa0554530-mRNA-1:five_prime_utr;Parent=Msa0554530-mRNA-1
chr4_1 five_prime_UTR 51908386 51908519 51908386 ID=Msa0554530-mRNA-1:five_prime_utr;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51908520 51908862 51908520 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51909031 51909192 51909031 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51909295 51909428 51909295 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51909968 51910129 51909968 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51910936 51911119 51910936 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51911211 51911655 51911211 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51911774 51911798 51911774 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51912230 51912991 51912230 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51913438 51913511 51913438 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 CDS 51913623 51913719 51913623 ID=Msa0554530-mRNA-1:cds;Parent=Msa0554530-mRNA-1
chr4_1 three_prime_UTR 51913720 51914171 51913720 ID=Msa0554530-mRNA-1:three_prime_utr;Parent=Msa0554530-mRNA-1
Gene Sequence

>Msa0554530

ATGAACAATAATGTTGGGAAACAAAGTTTGGCAGAACAAAATCACGCTCTTAATGACAGAAAGAGTCTCAATAATAGAGTAGTTAATGAAGGGCCAGGGTCTGAATCATCAACTGGAAATGACACTAGATTTAGTAAGGTAACCAAAGATGGAAACAGTGGGTTGAAGGGATCGATTCGAATCAATGAGAGGTTGCAGATTTCACAACAACCACCACCTCGTAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGCAACGTTGTGTGTGCTTTGTTAAGGAATTGTGGCTATGAAGTCAATGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCCTAGAAGATCCAGGAAATCACATTGATCTTGTTCTAACAGAGATAGCTATGCCTTTTGTAACGGGAATAGGTCTTTTGTGCAAGATAATGAGTCACAAAACTCTAAAGAATATTCCTGTGATTATGATGTCATGTCATGATTCTATGGGTATAGTGTTTAAGTGTTTGTCAAAAGGCGCAGCTGATTTTTTAGTCAAACCTATTCGGAGGAACGAACTTAAAAACCTCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAATGATAGTGGGAGTGAAAGTGGAACAAACACCCGAAAATTCGCAAAGTCAAGAAGCATCTGTGCATTTGACAACAATACTGGTAGCAGTGATGAGAATGATTATGGAAGCAGAGGCTTGAGTGTTCAAGATGGAAGTGACAATGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAAGTTAGCAGCAGCCCTCATCCAGTTTCACCTCCTAATCAATCTCATGATGCTCCTGATAGCACGTGTGCCCAAGTGGTGCATACAAAGCCTGAAAACATTAGCAGTATGTGGGTCCATGCCACAGAAAAAGAGTTCCATGAACCAATTGATCATCTTGATGATATTGCAATGGGTAAAGATTTGGCTATGGGAATATCTTTGAACACGCAACAAAAGCATGCACTTGAGGAATTATCTAACAATCCAATGCGTAAAGGGGTTAATAAGATGTCTGATATAGATGGTATGCAGCACAATAAAGGACAGAGTAATCTCTGTGAAAAAGTACAACTGGAAGAGGACAGTGATAAAATTAGGATGCAGGAAAATCAGGGTACAAATTTTGGTGTTGCTGATAGCAGCAATCCACATGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCAAAAACAAAAGCAAGTTGTTGCTTCAAACAGCATCCATCACTTGAACTAACATTGGAAAGGATGGGAGAAGTAAAAGATGACGAACATGTCACAGGTGATGAATGTAATGTTTTGAGACATTCAAATCTATCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTGTTCCCCACTAGACAATAGCTCAGTTGCACCAATTACAGAGACAACACACAACTTCACATCTCATTCAAATGCCACCCCAAATCAGCAGTCTAATGGAAGCAACAACATTAATGACCTGACTTCCACTAATACATATCTTAGCACGAAACCCGAAAATTTTGACAAGAAACCCGAGTCTTCTGGAGGGATTGGCTCTTTTATTTCTTCTGAAGTCCAAACTGTGCAAAATAATAGTATTTCTGCACCTCAGAGGAAGACTTCTTCCCAGGATGAATATGCCGGAATCGTTAAAGGACAGGTGCGAGGTTCTGAACAAGGATTCCAAATTGAGCACACTCAGCATCAACTTCAACATTGTAATCACATTGCCGACAAGGCTGCAGTGGATCTCCAATCAGTTCATGATCTCTTACTGAAAAGCACGACCAAAGATGCTCAGCAATGTACATTATCAAATGCGTTTGGAGGGCCAGCAGAAAGTAATGGTACAAATTATGGTTTGAATGGAAGTGCAGCTGAGAGTGATCACGGGAGTAATGGACAGGAAGGAAGCAACACTTTGACAATCAGAATGATAAATGTGGAAAATCGTGATGTGACAGCTGGGAGCATTGGAGTTGGTGCAATTGAGAGAATAAACATTGGAAGTGGATCATATGAAGAACGAATTGCATTGAGGGAGGCTGCCTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGACAAAAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGATCAGCGGCCACGTGTTAGGGGACAATTTGTTAAACAAATAGTGTCTGATACCAAAGAAGAAGAAAATAAAGAAAGCGAGGAACTTGTATCTATGGATAATTCTAGCGATGTTCCACAACAATACCAATCAAAATGCTGA
Protein sequence

>Msa0554530

MNNNVGKQSLAEQNHALNDRKSLNNRVVNEGPGSESSTGNDTRFSKVTKDGNSGLKGSIRINERLQISQQPPPRNPVTYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSNDSGSESGTNTRKFAKSRSICAFDNNTGSSDENDYGSRGLSVQDGSDNGSGTQSSWTTNLAQVSSSPHPVSPPNQSHDAPDSTCAQVVHTKPENISSMWVHATEKEFHEPIDHLDDIAMGKDLAMGISLNTQQKHALEELSNNPMRKGVNKMSDIDGMQHNKGQSNLCEKVQLEEDSDKIRMQENQGTNFGVADSSNPHAESRDLNTSNGFSGFAKTKASCCFKQHPSLELTLERMGEVKDDEHVTGDECNVLRHSNLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPITETTHNFTSHSNATPNQQSNGSNNINDLTSTNTYLSTKPENFDKKPESSGGIGSFISSEVQTVQNNSISAPQRKTSSQDEYAGIVKGQVRGSEQGFQIEHTQHQLQHCNHIADKAAVDLQSVHDLLLKSTTKDAQQCTLSNAFGGPAESNGTNYGLNGSAAESDHGSNGQEGSNTLTIRMINVENRDVTAGSIGVGAIERINIGSGSYEERIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQIVSDTKEEENKESEELVSMDNSSDVPQQYQSKC*