AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0602620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0602620 MtrunA17_Chr4g0030271 94.975 796 39 1 1 795 1 796 0.0 1522
Msa0602620 MtrunA17_Chr1g0181811 44.604 695 345 13 77 762 73 736 2.45e-153 466
Msa0602620 MtrunA17_Chr7g0276361 59.690 129 52 0 82 210 7 135 6.81e-49 182
Msa0602620 MtrunA17_Chr7g0276361 70.833 48 14 0 716 763 537 584 1.04e-15 81.3
Msa0602620 MtrunA17_Chr3g0127941 56.115 139 61 0 80 218 47 185 1.09e-48 183
Msa0602620 MtrunA17_Chr3g0127941 31.503 346 170 15 437 762 374 672 7.60e-18 88.2
Msa0602620 MtrunA17_Chr8g0345901 53.731 134 62 0 77 210 24 157 1.32e-44 171
Msa0602620 MtrunA17_Chr8g0345901 74.468 47 12 0 720 766 584 630 6.02e-15 79.0
Msa0602620 MtrunA17_Chr4g0061021 44.531 128 71 0 83 210 27 154 1.56e-31 130
Msa0602620 MtrunA17_Chr4g0061021 70.833 48 14 0 716 763 501 548 4.54e-16 82.4
Msa0602620 MtrunA17_Chr3g0091641 43.750 128 72 0 83 210 18 145 5.94e-29 122
Msa0602620 MtrunA17_Chr3g0091641 63.793 58 18 1 709 763 484 541 1.75e-15 80.5
Msa0602620 MtrunA17_Chr2g0304841 40.157 127 72 2 84 210 18 140 1.49e-22 103
Msa0602620 MtrunA17_Chr1g0161431 36.025 161 88 3 89 248 15 161 4.38e-22 101
Msa0602620 MtrunA17_Chr3g0134481 40.800 125 71 1 89 213 12 133 1.18e-21 93.6
Msa0602620 MtrunA17_Chr4g0067981 33.537 164 94 3 89 251 35 184 1.95e-21 99.8
Msa0602620 MtrunA17_Chr2g0294911 34.568 162 100 3 62 222 7 163 2.28e-21 99.4
Msa0602620 MtrunA17_Chr4g0074411 38.235 136 80 2 81 216 15 146 2.64e-21 99.0
Msa0602620 MtrunA17_Chr3g0137101 39.344 122 71 1 89 210 12 130 4.38e-21 98.6
Msa0602620 MtrunA17_Chr4g0074401 37.410 139 82 3 78 216 12 145 8.45e-20 94.4
Msa0602620 MtrunA17_Chr1g0149841 32.927 164 101 2 89 252 9 163 1.06e-19 93.2
Msa0602620 MtrunA17_Chr3g0123131 36.585 123 73 2 89 210 17 135 1.65e-19 93.2
Msa0602620 MtrunA17_Chr8g0376881 35.772 123 74 2 89 210 29 147 2.41e-18 89.4
Msa0602620 MtrunA17_Chr7g0256551 34.307 137 72 3 91 209 11 147 1.35e-17 83.2
Msa0602620 MtrunA17_Chr7g0275401 34.615 130 82 1 91 220 11 137 2.92e-17 83.2
Msa0602620 MtrunA17_Chr1g0149851 34.426 122 77 1 89 210 9 127 8.78e-17 84.3
Msa0602620 MtrunA17_Chr5g0414931 36.719 128 68 2 89 203 16 143 3.01e-15 76.3
Msa0602620 MtrunA17_Chr1g0170741 36.220 127 69 2 89 203 8 134 3.06e-15 75.1
Msa0602620 MtrunA17_Chr7g0275891 33.083 133 85 2 89 220 9 138 1.64e-14 75.9
Msa0602620 MtrunA17_Chr3g0128691 34.400 125 69 2 91 203 20 143 5.71e-14 70.5
Msa0602620 MtrunA17_Chr3g0082861 30.657 137 77 2 91 209 6 142 8.12e-14 70.1
Msa0602620 MtrunA17_Chr8g0352871 30.882 136 77 2 91 209 11 146 3.14e-13 68.9
Msa0602620 MtrunA17_Chr3g0134461 31.579 133 87 2 89 220 12 141 6.74e-13 68.2
Msa0602620 MtrunA17_Chr3g0118211 30.827 133 83 1 86 209 20 152 8.65e-13 68.2
Msa0602620 MtrunA17_Chr8g0383961 33.594 128 80 2 89 215 18 141 1.48e-12 68.6
Msa0602620 MtrunA17_Chr4g0059571 30.769 130 81 1 89 209 26 155 1.59e-12 67.8
Msa0602620 MtrunA17_Chr4g0074421 41.463 82 45 1 135 216 2 80 6.42e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0602620 AT5G02810.1 43.179 755 334 23 47 777 43 726 3.82e-133 413
Msa0602620 AT5G60100.5 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0602620 AT5G60100.5 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0602620 AT5G60100.3 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0602620 AT5G60100.3 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0602620 AT5G60100.1 44.017 468 172 13 73 528 48 437 4.82e-91 295
Msa0602620 AT5G60100.1 75.000 48 12 0 715 762 437 484 1.38e-16 84.0
Msa0602620 AT5G60100.7 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0602620 AT5G60100.6 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0602620 AT5G60100.4 44.524 420 150 10 73 482 48 394 1.62e-85 278
Msa0602620 AT5G60100.2 41.616 495 172 14 73 528 48 464 6.07e-85 280
Msa0602620 AT5G60100.2 73.585 53 12 1 710 762 461 511 1.76e-16 84.0
Msa0602620 AT5G02810.2 40.665 632 297 21 165 777 10 582 7.46e-82 273
Msa0602620 AT2G46790.1 48.438 192 84 2 77 268 25 201 1.82e-54 196
Msa0602620 AT2G46790.1 78.723 47 10 0 720 766 417 463 9.27e-17 84.3
Msa0602620 AT2G46790.3 48.438 192 84 2 77 268 25 201 1.92e-54 195
Msa0602620 AT5G24470.1 58.779 131 54 0 80 210 41 171 4.62e-51 188
Msa0602620 AT5G24470.1 76.087 46 11 0 720 765 509 554 3.40e-16 83.2
Msa0602620 AT5G61380.1 45.312 128 70 0 83 210 13 140 1.31e-30 128
Msa0602620 AT5G61380.1 60.417 48 19 0 716 763 529 576 4.39e-13 73.2
Msa0602620 AT3G16857.1 36.232 138 83 2 87 223 35 168 1.64e-21 100
Msa0602620 AT3G16857.2 36.232 138 83 2 87 223 35 168 1.67e-21 100
Msa0602620 AT2G25180.1 35.220 159 98 3 84 242 13 166 5.63e-21 98.6
Msa0602620 AT4G31920.1 38.095 126 74 2 84 209 13 134 1.75e-19 93.6
Msa0602620 AT1G67710.1 37.209 129 75 3 83 210 6 129 8.10e-19 91.3
Msa0602620 AT2G46670.1 78.723 47 10 0 720 766 132 178 1.96e-18 84.3
Msa0602620 AT2G01760.1 37.097 124 76 1 87 210 9 130 3.88e-18 87.8
Msa0602620 AT2G46790.5 78.723 47 10 0 720 766 260 306 2.07e-17 84.3
Msa0602620 AT2G46790.4 78.723 47 10 0 720 766 260 306 2.07e-17 84.3
Msa0602620 AT2G46790.2 78.723 47 10 0 720 766 300 346 5.05e-17 84.0
Msa0602620 AT2G46790.2 43.434 99 41 2 170 268 1 84 1.05e-15 80.1
Msa0602620 AT1G59940.2 28.780 205 125 3 89 281 125 320 1.93e-15 79.0
Msa0602620 AT1G59940.1 28.780 205 125 3 89 281 33 228 3.26e-15 76.3
Msa0602620 AT5G58080.1 34.615 130 79 3 81 210 12 135 2.63e-14 77.4
Msa0602620 AT1G10470.3 33.333 144 81 2 84 215 15 155 2.83e-14 73.9
Msa0602620 AT1G10470.1 33.333 144 81 2 84 215 29 169 3.38e-14 73.9
Msa0602620 AT3G16857.3 40.000 90 49 2 135 223 13 98 4.66e-14 76.6
Msa0602620 AT3G57040.2 29.710 138 78 2 91 209 11 148 1.29e-13 71.6
Msa0602620 AT3G57040.1 29.710 138 78 2 91 209 11 148 1.29e-13 71.6
Msa0602620 AT2G01760.2 30.263 152 76 2 87 210 9 158 7.41e-13 71.6
Msa0602620 AT3G48100.1 32.800 125 74 1 89 203 25 149 1.43e-12 67.4
Msa0602620 AT1G19050.1 30.128 156 96 3 84 228 17 170 1.50e-12 67.8
Msa0602620 AT5G62920.1 33.600 125 68 3 79 203 39 148 1.62e-12 67.4
Msa0602620 AT1G74890.1 29.412 153 92 2 89 232 18 163 1.68e-12 67.8
Msa0602620 AT3G62670.1 34.694 147 84 5 81 223 34 172 2.28e-12 70.5
Msa0602620 AT2G41310.1 29.412 136 79 2 91 209 11 146 5.91e-12 66.6

Find 240 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCTCTAGATTCAGTTTA+TGG 0.124447 4_2:+46386248 Msa0602620:three_prime_UTR
CAACCCACTGTTTCCATCTT+TGG 0.194811 4_2:-46381033 None:intergenic
GAAAGTAATGGTACAAATTA+TGG 0.199380 4_2:+46385103 Msa0602620:CDS
GAAAATCAGGGTACAAATTT+TGG 0.204154 4_2:+46383789 Msa0602620:CDS
CTTCCATTAGACTGCTGATT+TGG 0.229504 4_2:-46384704 None:intergenic
TGTGATTTCCTGGATCTTCT+AGG 0.241633 4_2:-46381439 None:intergenic
TTCCATTAGACTGCTGATTT+GGG 0.257919 4_2:-46384703 None:intergenic
GAACCAAACATACACTAAAT+TGG 0.271670 4_2:+46379887 Msa0602620:five_prime_UTR
AGAAAGATGCTTTGACAAAA+AGG 0.272028 4_2:+46385342 Msa0602620:CDS
TAGTGGGAGAAGATATTATT+TGG 0.278360 4_2:-46378998 None:intergenic
TGTAATATCAACAGTTAATA+TGG 0.281302 4_2:+46386439 Msa0602620:three_prime_UTR
CAGATCAGCGGCCACGTGTT+AGG 0.286244 4_2:+46385838 Msa0602620:CDS
CTTGAAGTTAGAATCAATTC+TGG 0.287321 4_2:-46379715 None:intergenic
TTGTGTGTTGTCTCTGTAAT+TGG 0.290138 4_2:-46384656 None:intergenic
TGTACATTGCTGAGCATCTT+TGG 0.292060 4_2:-46385053 None:intergenic
GACAAGAAACCCGAGTCTTC+TGG 0.298741 4_2:+46384788 Msa0602620:CDS
ATATACTTATGAGATTAAAT+TGG 0.305249 4_2:-46379498 None:intergenic
ATAGTTTGAGACTAAATTAA+TGG 0.308506 4_2:-46379469 None:intergenic
AAAACCTCTGGCAACATGTT+TGG 0.320017 4_2:+46381762 Msa0602620:CDS
AATTAGGATGCAGGAAAATC+AGG 0.320205 4_2:+46383776 Msa0602620:CDS
AATAAGCTGAAAACAGCTTA+TGG 0.322779 4_2:-46380392 None:intergenic
TCTCCAATTTAGTGTATGTT+TGG 0.328498 4_2:-46379890 None:intergenic
CTAACAATCCAATGCGTAAA+GGG 0.332317 4_2:+46383661 Msa0602620:CDS
TCATATAGAGACTAAATTGA+TGG 0.332446 4_2:-46379539 None:intergenic
AAGAGGACAGTGATAAAATT+AGG 0.332509 4_2:+46383760 Msa0602620:CDS
CACCTGTCCTTTAACGATTC+CGG 0.332953 4_2:-46384906 None:intergenic
AACGTAAAGTGGTTTATGTT+TGG 0.335080 4_2:-46379811 None:intergenic
GAATATGCCGGAATCGTTAA+AGG 0.345276 4_2:+46384899 Msa0602620:CDS
AGTGATTGTGTATCAAAATC+AGG 0.349599 4_2:+46386351 Msa0602620:three_prime_UTR
ATAAGTTTGTTTCGATCTCT+TGG 0.349755 4_2:+46380640 Msa0602620:five_prime_UTR
TATTGCAATGGGTAAAGATT+TGG 0.350339 4_2:+46383587 Msa0602620:CDS
GATGCTGAGTGTGCTCAATT+TGG 0.350604 4_2:-46384949 None:intergenic
CATTTATCATGATATTGTTA+TGG 0.351525 4_2:+46380079 Msa0602620:five_prime_UTR
AAGCGAGGAACTTGTATCTA+TGG 0.357804 4_2:+46386025 Msa0602620:CDS
TTGTTAACACTTTGTCTAGT+TGG 0.361690 4_2:-46380552 None:intergenic
AGCAGTGATGAGAATGATTA+TGG 0.369778 4_2:+46382427 Msa0602620:CDS
AGATCAGCGGCCACGTGTTA+GGG 0.374526 4_2:+46385839 Msa0602620:CDS
GATGGTATGCAGCACAATAA+AGG 0.379747 4_2:+46383705 Msa0602620:CDS
ACAAGATCAATGTGATTTCC+TGG 0.380863 4_2:-46381449 None:intergenic
GGTACAAATTATGGTTTGAA+TGG 0.382401 4_2:+46385112 Msa0602620:CDS
AAGCTATCTTAGAGAGCTTA+AGG 0.386294 4_2:-46380416 None:intergenic
CAGGCTTTGTATGCACCACT+TGG 0.388304 4_2:-46383403 None:intergenic
AGAAGGTGACGTGGACAAAA+TGG 0.393646 4_2:-46378974 None:intergenic
TTTCATTTCTATCTGGGTGC+TGG 0.395811 4_2:+46380221 Msa0602620:five_prime_UTR
TAATGTTGGGAAACAAAGTT+TGG 0.397169 4_2:+46380899 Msa0602620:CDS
CAACAAGGTGAGGACTTATC+AGG 0.402675 4_2:-46380830 None:intergenic
GATGTCATGTCATGATTCTA+TGG 0.404857 4_2:+46381667 Msa0602620:CDS
ACTTGGGCACACGTGCTATC+AGG 0.407813 4_2:-46383386 None:intergenic
AAACATGTCAAAATCAATTC+TGG 0.414270 4_2:-46379662 None:intergenic
CTTTCTCAGTCTAATGATAG+TGG 0.417323 4_2:+46382331 Msa0602620:intron
CAAGATGATCAATTGGTTCA+TGG 0.417464 4_2:-46383469 None:intergenic
TGTACATTATCAAATGCGTT+TGG 0.418003 4_2:+46385070 Msa0602620:CDS
GATTGATTAGGAGGTGAAAC+TGG 0.419855 4_2:-46383353 None:intergenic
TGCTAAGACAGAAGCTTTGA+GGG 0.426351 4_2:+46380128 Msa0602620:five_prime_UTR
CGATTCCGGCATATTCATCC+TGG 0.427709 4_2:-46384892 None:intergenic
CATGAACCAATTGATCATCT+TGG 0.430561 4_2:+46383470 Msa0602620:CDS
CTCGTAATCCAGTTACATAC+TGG 0.430763 4_2:+46381108 Msa0602620:CDS
ACCCCAAATCAGCAGTCTAA+TGG 0.431681 4_2:+46384701 Msa0602620:CDS
AATTCACTCAACAAGGGGAT+TGG 0.433130 4_2:+46380796 Msa0602620:five_prime_UTR
CCCGAGTCTTCTGGAGGGAT+TGG 0.433839 4_2:+46384797 Msa0602620:CDS
AGTGCATCTGGTGTTATGTA+AGG 0.439754 4_2:+46379992 Msa0602620:five_prime_UTR
ACGTTGTGTGTGCTTTGTTA+AGG 0.439905 4_2:+46381195 Msa0602620:CDS
TTATATGGATTAAGAAAAGA+AGG 0.440333 4_2:+46379120 Msa0602620:five_prime_UTR
GTGTTTAAGTGTTTGTCAAA+AGG 0.441973 4_2:+46381695 Msa0602620:CDS
AGAGATTTGAACACTTCAAA+TGG 0.442663 4_2:+46383846 Msa0602620:CDS
TAGTTTGAGACTAAATTAAT+GGG 0.443703 4_2:-46379468 None:intergenic
TAAGTTTGTTTCGATCTCTT+GGG 0.444146 4_2:+46380641 Msa0602620:five_prime_UTR
TTTAGTAAGGTAACCAAAGA+TGG 0.445366 4_2:+46381020 Msa0602620:CDS
GTGCTAAGACAGAAGCTTTG+AGG 0.445375 4_2:+46380127 Msa0602620:five_prime_UTR
TTAAGGAATTGTGGCTATGA+AGG 0.445432 4_2:+46381212 Msa0602620:CDS
ATTCAATCCAAATAGACATA+TGG 0.446547 4_2:-46380305 None:intergenic
AAGAAGCTAGATGCAGTTGC+TGG 0.447864 4_2:-46386114 None:intergenic
AGAAGATATTATTTGGAAGA+AGG 0.448526 4_2:-46378991 None:intergenic
ATTCACTCAACAAGGGGATT+GGG 0.449211 4_2:+46380797 Msa0602620:five_prime_UTR
TTTGTACCATTACTTTCTGC+TGG 0.449492 4_2:-46385097 None:intergenic
GGCATACCAAGATGATCAAT+TGG 0.451243 4_2:-46383476 None:intergenic
TTAAGTTCGTTCCTCCGAAT+AGG 0.453701 4_2:-46381740 None:intergenic
GATATGTATTAGTGGAAGTC+AGG 0.455777 4_2:-46384742 None:intergenic
CCAGTTGATGATTCAGACCC+TGG 0.456694 4_2:-46380984 None:intergenic
TGAACTAACATTGGAAAGGA+TGG 0.459465 4_2:+46383926 Msa0602620:CDS
GAGATCCACTGCAGCCTTGT+CGG 0.460095 4_2:-46384996 None:intergenic
GGAGCATCATGAGATTGATT+AGG 0.462749 4_2:-46383365 None:intergenic
CGTGCTAAGATATGTATTAG+TGG 0.463004 4_2:-46384750 None:intergenic
TGTGCATTTGACAACAATAC+TGG 0.463216 4_2:+46382403 Msa0602620:CDS
TTTCCAGATGATATTGCAAT+GGG 0.463893 4_2:+46383576 Msa0602620:intron
AAAGTGAGTTGAACGTAAAG+TGG 0.464915 4_2:-46379822 None:intergenic
TTATTAACCCCTTTACGCAT+TGG 0.471608 4_2:-46383669 None:intergenic
GTTGTGTTTGCAGAACTTGA+TGG 0.471966 4_2:+46380744 Msa0602620:intron
AATAAGATGTCTGATATAGA+TGG 0.472619 4_2:+46383687 Msa0602620:CDS
GTAAGAGATCATGAACTGAT+TGG 0.474021 4_2:-46385018 None:intergenic
CTGAAAACATTAGCAGTATG+TGG 0.478574 4_2:+46383423 Msa0602620:CDS
CGTTCACCTCGGAAGAAGCT+TGG 0.481141 4_2:+46386141 Msa0602620:three_prime_UTR
CCTCTAGAAACTAAAGTATG+AGG 0.482457 4_2:+46386404 Msa0602620:three_prime_UTR
TAATACAGCTTCTGCTTACC+AGG 0.483317 4_2:+46384149 Msa0602620:CDS
GATACAATGAACAATAATGT+TGG 0.484389 4_2:+46380885 Msa0602620:exon
AAATCTCTGCTTTCAGCATG+TGG 0.484591 4_2:-46383831 None:intergenic
CAGGCTCAAACTGGAAATGT+AGG 0.485646 4_2:+46384599 Msa0602620:intron
AGAGTAGTTAATGAAGGGCC+AGG 0.486659 4_2:+46380966 Msa0602620:CDS
AATAATAGAGTAGTTAATGA+AGG 0.486855 4_2:+46380960 Msa0602620:CDS
ATACAATGAACAATAATGTT+GGG 0.486890 4_2:+46380886 Msa0602620:exon
AGATGGAAACAGTGGGTTGA+AGG 0.487129 4_2:+46381037 Msa0602620:CDS
TTTCCACGCTTGAAGACCAT+TGG 0.487528 4_2:-46381414 None:intergenic
GAGAATTATAGCTAAGGGAA+AGG 0.488686 4_2:-46379057 None:intergenic
ATCATGATATTGTTATGGAA+TGG 0.489085 4_2:+46380084 Msa0602620:five_prime_UTR
CCAGGGTCTGAATCATCAAC+TGG 0.491779 4_2:+46380984 Msa0602620:CDS
CTTAATAGCAGAGACTGAAA+TGG 0.494270 4_2:+46379584 Msa0602620:five_prime_UTR
TGAAGAACGAATTGCATTGA+GGG 0.495424 4_2:+46385285 Msa0602620:CDS
TACATCAATAAAAGTTCTGC+TGG 0.497131 4_2:+46381148 Msa0602620:CDS
AGACCTATTCCCGTTACAAA+AGG 0.499408 4_2:-46381491 None:intergenic
GCCAATCCCTCCAGAAGACT+CGG 0.499926 4_2:-46384798 None:intergenic
AATGATAGTGGGAGTGAAAG+TGG 0.501913 4_2:+46382343 Msa0602620:CDS
TCAGAGGAAGACTTCTTCCC+AGG 0.502932 4_2:+46384874 Msa0602620:CDS
GAGAGAATAAACATTGGAAG+TGG 0.507163 4_2:+46385256 Msa0602620:CDS
AGTGTGGTTGATAATAATAT+AGG 0.507414 4_2:+46380860 Msa0602620:five_prime_UTR
TTCAGGTTAGATATCACAGC+AGG 0.507743 4_2:+46385805 Msa0602620:intron
TCTAACAATCCAATGCGTAA+AGG 0.510088 4_2:+46383660 Msa0602620:CDS
CAACTGAGCTATTGTCTAGT+GGG 0.510877 4_2:-46384631 None:intergenic
CTTTCCAGATGATATTGCAA+TGG 0.511570 4_2:+46383575 Msa0602620:intron
AATTATAGCTAAGGGAAAGG+AGG 0.513881 4_2:-46379054 None:intergenic
TCTTGGGTGGAGTAAGCCCC+AGG 0.516553 4_2:+46380657 Msa0602620:five_prime_UTR
GACATGAACATGGGGTCCAT+TGG 0.517379 4_2:-46386288 None:intergenic
CAGTGATAAAATTAGGATGC+AGG 0.518186 4_2:+46383767 Msa0602620:CDS
ACAGTCAATGCTGTTTCCAA+TGG 0.518670 4_2:+46381398 Msa0602620:intron
GGTGCTGGAATTCAGAGGTA+TGG 0.520859 4_2:+46380236 Msa0602620:five_prime_UTR
CCTCATACTTTAGTTTCTAG+AGG 0.521569 4_2:-46386404 None:intergenic
AAATGACACTAGATTTAGTA+AGG 0.524322 4_2:+46381007 Msa0602620:CDS
TCCAATGTTAGTTCAAGTGA+TGG 0.527354 4_2:-46383918 None:intergenic
ACATTATCAAATGCGTTTGG+AGG 0.528574 4_2:+46385073 Msa0602620:CDS
TGCCGGAATCGTTAAAGGAC+AGG 0.528938 4_2:+46384904 Msa0602620:CDS
GAGAGTGATCACGGGAGTAA+TGG 0.529561 4_2:+46385145 Msa0602620:CDS
CATTATCAAATGCGTTTGGA+GGG 0.530096 4_2:+46385074 Msa0602620:CDS
GAAAATCGTGATGTGACAGC+TGG 0.531023 4_2:+46385211 Msa0602620:CDS
AGAAGAATCTGTGAGTAGGT+AGG 0.534355 4_2:+46386177 Msa0602620:three_prime_UTR
ATTAGGATGCAGGAAAATCA+GGG 0.536240 4_2:+46383777 Msa0602620:CDS
TGTGCTTTGTTAAGGAATTG+TGG 0.537869 4_2:+46381203 Msa0602620:CDS
TCCATCACTTGAACTAACAT+TGG 0.539145 4_2:+46383917 Msa0602620:CDS
TTGCTCCCCATGATAAGTGT+GGG 0.541341 4_2:+46380606 Msa0602620:five_prime_UTR
TCCCCTTGTTGAGTGAATTG+TGG 0.542701 4_2:-46380792 None:intergenic
GATGGAAGTGACAATGGAAG+TGG 0.543929 4_2:+46382472 Msa0602620:CDS
ATGGGTAAAGATTTGGCTAT+GGG 0.546298 4_2:+46383594 Msa0602620:CDS
CATTGCCGACAAGGCTGCAG+TGG 0.546360 4_2:+46384991 Msa0602620:CDS
CTGGTAGAGAATTATAGCTA+AGG 0.546741 4_2:-46379063 None:intergenic
TGGAAAGTCCTAGAAGATCC+AGG 0.547640 4_2:+46381431 Msa0602620:CDS
TCCATTAGACTGCTGATTTG+GGG 0.548803 4_2:-46384702 None:intergenic
ATTAGACTGCTGATTTGGGG+TGG 0.550115 4_2:-46384699 None:intergenic
AAACATTACCGACATGAACA+TGG 0.550526 4_2:-46386298 None:intergenic
AATGGGTAAAGATTTGGCTA+TGG 0.551079 4_2:+46383593 Msa0602620:CDS
GTTTGTTTCGATCTCTTGGG+TGG 0.551910 4_2:+46380644 Msa0602620:five_prime_UTR
AGGCTTTGTATGCACCACTT+GGG 0.553411 4_2:-46383402 None:intergenic
GCATCATGAGATTGATTAGG+AGG 0.554225 4_2:-46383362 None:intergenic
GATGGAAACAGTGGGTTGAA+GGG 0.554396 4_2:+46381038 Msa0602620:CDS
TTGTGTTTGCAGAACTTGAT+GGG 0.555239 4_2:+46380745 Msa0602620:intron
ACCAGATGCACTAAAATGAC+AGG 0.558415 4_2:-46379981 None:intergenic
GATGTGACAGCTGGGAGCAT+TGG 0.564508 4_2:+46385220 Msa0602620:CDS
GAATGGCACTTACTAATCAC+AGG 0.564545 4_2:-46381554 None:intergenic
AACATTACCGACATGAACAT+GGG 0.567063 4_2:-46386297 None:intergenic
TGATCACGGGAGTAATGGAC+AGG 0.569320 4_2:+46385150 Msa0602620:CDS
ATCAATAAAAGTTCTGCTGG+TGG 0.570871 4_2:+46381151 Msa0602620:CDS
AGTGCAGCTGAGAGTGATCA+CGG 0.574147 4_2:+46385136 Msa0602620:CDS
GATCAGCGGCCACGTGTTAG+GGG 0.574183 4_2:+46385840 Msa0602620:CDS
CAGGTGCGAGGTTCTGAACA+AGG 0.575372 4_2:+46384923 Msa0602620:CDS
TGCTCCCCATGATAAGTGTG+GGG 0.575571 4_2:+46380607 Msa0602620:five_prime_UTR
GGACAAAATGGAGGTGTGAA+TGG 0.575742 4_2:-46378962 None:intergenic
TTAGGAGGTGAAACTGGATG+AGG 0.576049 4_2:-46383347 None:intergenic
TTCTCCAAACATGTTGCCAG+AGG 0.577299 4_2:-46381766 None:intergenic
TCTTCCCAGGATGAATATGC+CGG 0.579674 4_2:+46384887 Msa0602620:CDS
AGAAGAAAATAAAGAAAGCG+AGG 0.580844 4_2:+46386010 Msa0602620:CDS
GTGATTGTGTATCAAAATCA+GGG 0.581270 4_2:+46386352 Msa0602620:three_prime_UTR
TTTCCAATGGTCTTCAAGCG+TGG 0.582223 4_2:+46381411 Msa0602620:CDS
TGGTAGAGAATTATAGCTAA+GGG 0.582296 4_2:-46379062 None:intergenic
AATCCACAATTCACTCAACA+AGG 0.582781 4_2:+46380789 Msa0602620:five_prime_UTR
TTGTAATCACATTGCCGACA+AGG 0.583248 4_2:+46384982 Msa0602620:CDS
GAGAATGATTATGGAAGCAG+AGG 0.583648 4_2:+46382436 Msa0602620:CDS
TAATAGAAGAATCTGTGAGT+AGG 0.584797 4_2:+46386173 Msa0602620:three_prime_UTR
AATTCTGGCCGCTGTTAACG+TGG 0.584820 4_2:-46379647 None:intergenic
ACAGCTGGGAGCATTGGAGT+TGG 0.585431 4_2:+46385226 Msa0602620:CDS
GTTCAAGATGGAAGTGACAA+TGG 0.586262 4_2:+46382466 Msa0602620:CDS
TTTCTCAGTCTAATGATAGT+GGG 0.586613 4_2:+46382332 Msa0602620:intron
TGACAATGGAAGTGGAACTC+AGG 0.587907 4_2:+46382480 Msa0602620:CDS
AATGAAACGACAAGCTGTTG+CGG 0.588902 4_2:-46380161 None:intergenic
GAACTAACATTGGAAAGGAT+GGG 0.589962 4_2:+46383927 Msa0602620:CDS
ATGAAGAACGAATTGCATTG+AGG 0.589999 4_2:+46385284 Msa0602620:CDS
GCAACAAAAGCATGCACTTG+AGG 0.591773 4_2:+46383632 Msa0602620:CDS
ATAATAGAGTAGTTAATGAA+GGG 0.592318 4_2:+46380961 Msa0602620:CDS
GACAATCAGAATGATAAATG+TGG 0.594838 4_2:+46385189 Msa0602620:CDS
AAAGATGACGAACATGTCAC+AGG 0.596117 4_2:+46383957 Msa0602620:CDS
TTTGCTCCCCATGATAAGTG+TGG 0.596722 4_2:+46380605 Msa0602620:five_prime_UTR
GCAACTGAGCTATTGTCTAG+TGG 0.597631 4_2:-46384632 None:intergenic
CACGGGAGTAATGGACAGGA+AGG 0.599973 4_2:+46385154 Msa0602620:CDS
ATCGTTAAAGGACAGGTGCG+AGG 0.600199 4_2:+46384911 Msa0602620:CDS
GAAGTTAGAATCAATTCTGG+AGG 0.607074 4_2:-46379712 None:intergenic
ATCTGACGTGGCAAAGCGAG+AGG 0.607510 4_2:-46378921 None:intergenic
TCGTAATCCAGTTACATACT+GGG 0.608015 4_2:+46381109 Msa0602620:CDS
GCAATTGAGAGAATAAACAT+TGG 0.611269 4_2:+46385250 Msa0602620:CDS
AGAGGCTTGAGTGTTCAAGA+TGG 0.615535 4_2:+46382454 Msa0602620:CDS
GTTAACGTGGAATCAAACAT+AGG 0.615752 4_2:-46379634 None:intergenic
GCATCTGGTGTTATGTAAGG+TGG 0.616330 4_2:+46379995 Msa0602620:five_prime_UTR
GTAACTGGATTACGAGGTGG+TGG 0.624498 4_2:-46381101 None:intergenic
GATTCCGGCATATTCATCCT+GGG 0.625703 4_2:-46384891 None:intergenic
CACTTGAACTAACATTGGAA+AGG 0.626431 4_2:+46383922 Msa0602620:CDS
TAACAATCCAATGCGTAAAG+GGG 0.626567 4_2:+46383662 Msa0602620:CDS
GAGTAGTTAATGAAGGGCCA+GGG 0.627276 4_2:+46380967 Msa0602620:CDS
ATCTGGGTGCTGGAATTCAG+AGG 0.628183 4_2:+46380231 Msa0602620:five_prime_UTR
CCAATCCCTCCAGAAGACTC+GGG 0.629348 4_2:-46384797 None:intergenic
TCCACAATTCACTCAACAAG+GGG 0.629815 4_2:+46380791 Msa0602620:five_prime_UTR
TGAAAACATTAGCAGTATGT+GGG 0.631408 4_2:+46383424 Msa0602620:CDS
AAGAAACCCGAGTCTTCTGG+AGG 0.632510 4_2:+46384791 Msa0602620:CDS
ATGTCATGTCATGATTCTAT+GGG 0.635479 4_2:+46381668 Msa0602620:CDS
TGGGTGAAGTGCTCATGATA+CGG 0.636873 4_2:+46380764 Msa0602620:five_prime_UTR
AAAGCTTCTGTCTTAGCACA+AGG 0.638707 4_2:-46380123 None:intergenic
GGAGGGCCAGCAGAAAGTAA+TGG 0.640302 4_2:+46385091 Msa0602620:CDS
TGATAGCACGTGTGCCCAAG+TGG 0.641145 4_2:+46383388 Msa0602620:CDS
TTGCCACGTCAGATCCAACA+TGG 0.642547 4_2:+46378930 Msa0602620:five_prime_UTR
GTGCAGCTGAGAGTGATCAC+GGG 0.643094 4_2:+46385137 Msa0602620:CDS
GCTTCTTTGCACGTTCACCT+CGG 0.649116 4_2:+46386130 Msa0602620:three_prime_UTR
TCTGACGTGGCAAAGCGAGA+GGG 0.652202 4_2:-46378920 None:intergenic
AATGGACCCCATGTTCATGT+CGG 0.654601 4_2:+46386290 Msa0602620:three_prime_UTR
GCTCCCCATGATAAGTGTGG+GGG 0.654841 4_2:+46380608 Msa0602620:five_prime_UTR
GTAACCAAAGATGGAAACAG+TGG 0.658997 4_2:+46381029 Msa0602620:CDS
CAGTATGTAACTGGATTACG+AGG 0.659366 4_2:-46381107 None:intergenic
GTTTGATTCCACGTTAACAG+CGG 0.659445 4_2:+46379639 Msa0602620:five_prime_UTR
ATCCACAATTCACTCAACAA+GGG 0.661316 4_2:+46380790 Msa0602620:five_prime_UTR
GGAAAAGTATGAAATGTGCA+AGG 0.667460 4_2:-46386524 None:intergenic
TGGGAAGAAGTCTTCCTCTG+AGG 0.668931 4_2:-46384872 None:intergenic
AAAATCGTGATGTGACAGCT+GGG 0.670781 4_2:+46385212 Msa0602620:CDS
ACAAATTGTCCCCTAACACG+TGG 0.674787 4_2:-46385849 None:intergenic
ATAGTATTTCTGCACCTCAG+AGG 0.679492 4_2:+46384858 Msa0602620:CDS
TAACCAAAGATGGAAACAGT+GGG 0.680991 4_2:+46381030 Msa0602620:CDS
TAGGAGGTGAAACTGGATGA+GGG 0.683091 4_2:-46383346 None:intergenic
AAAACTCCAAGCTTCTTCCG+AGG 0.683502 4_2:-46386147 None:intergenic
AACTGAGCTATTGTCTAGTG+GGG 0.684907 4_2:-46384630 None:intergenic
TTATTTGGAAGAAGGTGACG+TGG 0.684999 4_2:-46378983 None:intergenic
AGAACGAATTGCATTGAGGG+AGG 0.686550 4_2:+46385288 Msa0602620:CDS
ACATTACCGACATGAACATG+GGG 0.688460 4_2:-46386296 None:intergenic
GATCGATTCGAATCAATGAG+AGG 0.691333 4_2:+46381060 Msa0602620:CDS
AGAAACCCGAGTCTTCTGGA+GGG 0.698046 4_2:+46384792 Msa0602620:CDS
AGGTGACGTGGACAAAATGG+AGG 0.700107 4_2:-46378971 None:intergenic
ATTCCATGTTGGATCTGACG+TGG 0.716509 4_2:-46378933 None:intergenic
TATGTAACTGGATTACGAGG+TGG 0.727662 4_2:-46381104 None:intergenic
GCAGAATATAGACATGAACA+AGG 0.738100 4_2:-46386324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATAATTCTCTAT+TGG + chr4_2:46379942-46379961 Msa0602620:five_prime_UTR 10.0%
!!! ATATAATGGAATTTTAAAAT+AGG + chr4_2:46382822-46382841 Msa0602620:intron 10.0%
!!! GTTTTAGATTTATTTATTTT+TGG + chr4_2:46384334-46384353 Msa0602620:intron 10.0%
!!! TTGTTTTCTTCTATTTATTT+TGG + chr4_2:46379229-46379248 Msa0602620:five_prime_UTR 15.0%
!! ATATACTTATGAGATTAAAT+TGG - chr4_2:46379501-46379520 None:intergenic 15.0%
!! ATTAATCTTATGAATCAATT+AGG + chr4_2:46382145-46382164 Msa0602620:intron 15.0%
!! TTAATCTTATGAATCAATTA+GGG + chr4_2:46382146-46382165 Msa0602620:intron 15.0%
!! AAAATAGGAAAGAATAATAA+TGG + chr4_2:46382837-46382856 Msa0602620:intron 15.0%
!! AAATAGGAAAGAATAATAAT+GGG + chr4_2:46382838-46382857 Msa0602620:intron 15.0%
!!! ATTATTTTGTAATTATTGTC+AGG + chr4_2:46383101-46383120 Msa0602620:intron 15.0%
!! ATTAGATGAATGAATAATTA+GGG - chr4_2:46383264-46383283 None:intergenic 15.0%
!! TATTAGATGAATGAATAATT+AGG - chr4_2:46383265-46383284 None:intergenic 15.0%
!! TAAAAAATACAGATAACATA+AGG - chr4_2:46384578-46384597 None:intergenic 15.0%
!! AATTGAGTTATAGAAATTAT+AGG - chr4_2:46385478-46385497 None:intergenic 15.0%
!!! TCCATATAAGAAAATTTTGT+GGG - chr4_2:46379109-46379128 None:intergenic 20.0%
!!! ATCCATATAAGAAAATTTTG+TGG - chr4_2:46379110-46379129 None:intergenic 20.0%
!!! TTATATGGATTAAGAAAAGA+AGG + chr4_2:46379120-46379139 Msa0602620:five_prime_UTR 20.0%
!!! ATTTTTTCTAAGTTATTGCA+TGG + chr4_2:46379292-46379311 Msa0602620:five_prime_UTR 20.0%
!!! TTTGTTTTTGTGTCTTATTT+TGG + chr4_2:46379438-46379457 Msa0602620:five_prime_UTR 20.0%
!!! TAGTTTGAGACTAAATTAAT+GGG - chr4_2:46379471-46379490 None:intergenic 20.0%
!!! ATAGTTTGAGACTAAATTAA+TGG - chr4_2:46379472-46379491 None:intergenic 20.0%
!! CATTTATCATGATATTGTTA+TGG + chr4_2:46380079-46380098 Msa0602620:five_prime_UTR 20.0%
!!! TTTTATTCCATATGTCTATT+TGG + chr4_2:46380298-46380317 Msa0602620:five_prime_UTR 20.0%
!! ATACAATGAACAATAATGTT+GGG + chr4_2:46380886-46380905 Msa0602620:exon 20.0%
!! AATAATAGAGTAGTTAATGA+AGG + chr4_2:46380960-46380979 Msa0602620:CDS 20.0%
!! ATAATAGAGTAGTTAATGAA+GGG + chr4_2:46380961-46380980 Msa0602620:CDS 20.0%
!! AATTAATATGCACAGAAATA+TGG - chr4_2:46381597-46381616 None:intergenic 20.0%
!! CATATTAATTATTGCTCATT+TGG + chr4_2:46381607-46381626 Msa0602620:intron 20.0%
!!! ATTTTTTAGTCAAACCTATT+CGG + chr4_2:46381726-46381745 Msa0602620:CDS 20.0%
!!! ATGATTTTGAGTTTATGAAT+GGG + chr4_2:46381884-46381903 Msa0602620:intron 20.0%
!! AAAATAAAACATGATGTTGT+AGG - chr4_2:46381931-46381950 None:intergenic 20.0%
!!! AACATCATGTTTTATTTTGT+GGG + chr4_2:46381933-46381952 Msa0602620:intron 20.0%
!! ATTGATACTTACATGAATAA+AGG - chr4_2:46382022-46382041 None:intergenic 20.0%
!! TATTCATGTAAGTATCAATT+AGG + chr4_2:46382023-46382042 Msa0602620:intron 20.0%
!! ATTAATTAATTGAACGAGTT+AGG + chr4_2:46382533-46382552 Msa0602620:intron 20.0%
!!! AGAATCGTAGTTTTATATAA+TGG + chr4_2:46382808-46382827 Msa0602620:intron 20.0%
!! ATTATTCTTCTCTTCTTTAT+TGG - chr4_2:46382928-46382947 None:intergenic 20.0%
!! AATAAAGAAGAGAAGAATAA+TGG + chr4_2:46382927-46382946 Msa0602620:intron 20.0%
!! ATAAAGAAGAGAAGAATAAT+GGG + chr4_2:46382928-46382947 Msa0602620:intron 20.0%
!! AATAGAATGTTAAAATGCTA+AGG - chr4_2:46383073-46383092 None:intergenic 20.0%
!! TTAGATGAATGAATAATTAG+GGG - chr4_2:46383263-46383282 None:intergenic 20.0%
!! ATATGTCAAAAAAACAGAAA+AGG - chr4_2:46383512-46383531 None:intergenic 20.0%
!! ATGTTAGTTATAAAATGACT+GGG - chr4_2:46384271-46384290 None:intergenic 20.0%
!!! TGTTATCTGTATTTTTTATC+AGG + chr4_2:46384580-46384599 Msa0602620:intron 20.0%
!! AATTTCTATAACTCAATTGA+TGG + chr4_2:46385480-46385499 Msa0602620:intron 20.0%
!!! TGGCAAAATATAATTTTCTT+AGG - chr4_2:46385567-46385586 None:intergenic 20.0%
!!! AGAAAATTATATTTTGCCAT+TGG + chr4_2:46385568-46385587 Msa0602620:intron 20.0%
!! AGTATAGAATATAGATTACA+AGG - chr4_2:46385611-46385630 None:intergenic 20.0%
!! TATATTCTATACTCATTTCT+GGG + chr4_2:46385618-46385637 Msa0602620:intron 20.0%
!! AATGATCTTAAATATTGAAC+AGG - chr4_2:46385776-46385795 None:intergenic 20.0%
!!! TTCTTTATTTTCTTCTTCTT+TGG - chr4_2:46386006-46386025 None:intergenic 20.0%
!! TGTAATATCAACAGTTAATA+TGG + chr4_2:46386439-46386458 Msa0602620:three_prime_UTR 20.0%
! AGAAGATATTATTTGGAAGA+AGG - chr4_2:46378994-46379013 None:intergenic 25.0%
!! CCATATAAGAAAATTTTGTG+GGG - chr4_2:46379108-46379127 None:intergenic 25.0%
! TAAAAAATCATCATACTCAG+AGG - chr4_2:46379361-46379380 None:intergenic 25.0%
! TCATATAGAGACTAAATTGA+TGG - chr4_2:46379542-46379561 None:intergenic 25.0%
! AAACATGTCAAAATCAATTC+TGG - chr4_2:46379665-46379684 None:intergenic 25.0%
! ATCATGATATTGTTATGGAA+TGG + chr4_2:46380084-46380103 Msa0602620:five_prime_UTR 25.0%
!! CTGTACTTATCTAAACTTTT+TGG + chr4_2:46380261-46380280 Msa0602620:five_prime_UTR 25.0%
! ATTCAATCCAAATAGACATA+TGG - chr4_2:46380308-46380327 None:intergenic 25.0%
!!! AGTGTGGTTGATAATAATAT+AGG + chr4_2:46380860-46380879 Msa0602620:five_prime_UTR 25.0%
! GATACAATGAACAATAATGT+TGG + chr4_2:46380885-46380904 Msa0602620:exon 25.0%
! AAATGACACTAGATTTAGTA+AGG + chr4_2:46381007-46381026 Msa0602620:CDS 25.0%
!! GAACTTTTATTGATGTAACA+GGG - chr4_2:46381145-46381164 None:intergenic 25.0%
!! AGAACTTTTATTGATGTAAC+AGG - chr4_2:46381146-46381165 None:intergenic 25.0%
!!! CATGATTTTGAGTTTATGAA+TGG + chr4_2:46381883-46381902 Msa0602620:intron 25.0%
!!! CAACATCATGTTTTATTTTG+TGG + chr4_2:46381932-46381951 Msa0602620:intron 25.0%
! TTAATATTTGAAGACTGAAC+TGG - chr4_2:46381992-46382011 None:intergenic 25.0%
! ATCATTCCTTTATTCATGTA+AGG + chr4_2:46382013-46382032 Msa0602620:intron 25.0%
! ATTGATCCTTACATGAATAA+AGG - chr4_2:46382058-46382077 None:intergenic 25.0%
! TATTCATGTAAGGATCAATT+AGG + chr4_2:46382059-46382078 Msa0602620:intron 25.0%
! ATTCATGTAAGGATCAATTA+GGG + chr4_2:46382060-46382079 Msa0602620:intron 25.0%
! TTGGATATATGATTTCACTA+AGG - chr4_2:46382202-46382221 None:intergenic 25.0%
! TCATGCTACAAAAATTAGAT+TGG - chr4_2:46382221-46382240 None:intergenic 25.0%
! ATTAACTCATCAACAATCAA+TGG + chr4_2:46382284-46382303 Msa0602620:intron 25.0%
! AAGTATATTAACCCATGTTA+AGG - chr4_2:46382314-46382333 None:intergenic 25.0%
!!! CATAAAATCATCACTTTTGA+TGG - chr4_2:46382748-46382767 None:intergenic 25.0%
!! CATCAAAAGTGATGATTTTA+TGG + chr4_2:46382746-46382765 Msa0602620:intron 25.0%
! CATACAATTAAACTTCCTAT+TGG - chr4_2:46382874-46382893 None:intergenic 25.0%
! ATTGTATGAGTGGTTATTTA+TGG + chr4_2:46382886-46382905 Msa0602620:intron 25.0%
! AATAAGATGTCTGATATAGA+TGG + chr4_2:46383687-46383706 Msa0602620:CDS 25.0%
! TTATAAAATGACTGGGATTT+GGG - chr4_2:46384264-46384283 None:intergenic 25.0%
! CATGTTAGTTATAAAATGAC+TGG - chr4_2:46384272-46384291 None:intergenic 25.0%
!!! ATGTCTTAGTTATTTTTCAG+TGG + chr4_2:46384312-46384331 Msa0602620:intron 25.0%
!!! TACTATTATTTTGCACAGTT+TGG - chr4_2:46384844-46384863 None:intergenic 25.0%
! GAAAGTAATGGTACAAATTA+TGG + chr4_2:46385103-46385122 Msa0602620:CDS 25.0%
!!! ATGTGGATTTAGTTAGTTTT+GGG + chr4_2:46385418-46385437 Msa0602620:intron 25.0%
! ATTATCAGAATCTTCCATTT+AGG - chr4_2:46385521-46385540 None:intergenic 25.0%
! CTATATTCTATACTCATTTC+TGG + chr4_2:46385617-46385636 Msa0602620:intron 25.0%
! GCAGTTGTATCAATTTAATT+TGG + chr4_2:46385655-46385674 Msa0602620:intron 25.0%
!!! AGATCATTCTTTTGTTTTTC+AGG + chr4_2:46385788-46385807 Msa0602620:intron 25.0%
!!! ATAATGATCAGCATTTTGAT+TGG - chr4_2:46386079-46386098 None:intergenic 25.0%
! TATGAACATAAAAACTCCAA+TGG + chr4_2:46386272-46386291 Msa0602620:three_prime_UTR 25.0%
!!! AATGGTTTTGAATTCCATGT+TGG - chr4_2:46378947-46378966 None:intergenic 30.0%
TAGTGGGAGAAGATATTATT+TGG - chr4_2:46379001-46379020 None:intergenic 30.0%
TGGTAGAGAATTATAGCTAA+GGG - chr4_2:46379065-46379084 None:intergenic 30.0%
AAAAAGGAAAAAAGCTTGAC+TGG - chr4_2:46379085-46379104 None:intergenic 30.0%
! AGAAAATTTTGTGGGGAAAA+AGG - chr4_2:46379101-46379120 None:intergenic 30.0%
! CCCCACAAAATTTTCTTATA+TGG + chr4_2:46379105-46379124 Msa0602620:five_prime_UTR 30.0%
CTTGAAGTTAGAATCAATTC+TGG - chr4_2:46379718-46379737 None:intergenic 30.0%
AACGTAAAGTGGTTTATGTT+TGG - chr4_2:46379814-46379833 None:intergenic 30.0%
GAACCAAACATACACTAAAT+TGG + chr4_2:46379887-46379906 Msa0602620:five_prime_UTR 30.0%
TCTCCAATTTAGTGTATGTT+TGG - chr4_2:46379893-46379912 None:intergenic 30.0%
! TTGAGCTTTTCATTTCTATC+TGG + chr4_2:46380214-46380233 Msa0602620:five_prime_UTR 30.0%
! TGAGCTTTTCATTTCTATCT+GGG + chr4_2:46380215-46380234 Msa0602620:five_prime_UTR 30.0%
GTCTGAAAAATATTTGAGAG+AGG + chr4_2:46380342-46380361 Msa0602620:five_prime_UTR 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr4_2:46380395-46380414 None:intergenic 30.0%
TTGTTAACACTTTGTCTAGT+TGG - chr4_2:46380555-46380574 None:intergenic 30.0%
! ATAAGTTTGTTTCGATCTCT+TGG + chr4_2:46380640-46380659 Msa0602620:five_prime_UTR 30.0%
! TAAGTTTGTTTCGATCTCTT+GGG + chr4_2:46380641-46380660 Msa0602620:five_prime_UTR 30.0%
TAATGTTGGGAAACAAAGTT+TGG + chr4_2:46380899-46380918 Msa0602620:CDS 30.0%
TTTAGTAAGGTAACCAAAGA+TGG + chr4_2:46381020-46381039 Msa0602620:CDS 30.0%
! AATTTTTCCCAGTATGTAAC+TGG - chr4_2:46381119-46381138 None:intergenic 30.0%
TACATCAATAAAAGTTCTGC+TGG + chr4_2:46381148-46381167 Msa0602620:CDS 30.0%
ACCAGATACTTAAAGTTCAA+AGG - chr4_2:46381275-46381294 None:intergenic 30.0%
! TTTTTGTATCTCAATCACGT+TGG - chr4_2:46381320-46381339 None:intergenic 30.0%
AGAAATATGGTGCAAAGTTT+GGG - chr4_2:46381584-46381603 None:intergenic 30.0%
!!! TTATTGCTCATTTGGTGTTT+TGG + chr4_2:46381615-46381634 Msa0602620:intron 30.0%
ATGTCATGTCATGATTCTAT+GGG + chr4_2:46381668-46381687 Msa0602620:CDS 30.0%
GTGTTTAAGTGTTTGTCAAA+AGG + chr4_2:46381695-46381714 Msa0602620:CDS 30.0%
GTAGGAACTATTGGTATATT+TGG - chr4_2:46381913-46381932 None:intergenic 30.0%
! ATTTGCTAGAAAGGAAGTAA+TGG - chr4_2:46382107-46382126 None:intergenic 30.0%
!! AACTTCGAAATTTGCTAGAA+AGG - chr4_2:46382116-46382135 None:intergenic 30.0%
TGATTTCACTAAGGAAGTAA+TGG - chr4_2:46382193-46382212 None:intergenic 30.0%
TTTCTCAGTCTAATGATAGT+GGG + chr4_2:46382332-46382351 Msa0602620:intron 30.0%
! TTCTTGACTTTGCGAATTTT+CGG - chr4_2:46382378-46382397 None:intergenic 30.0%
AAACTAACAGTGATGACATT+CGG - chr4_2:46382648-46382667 None:intergenic 30.0%
!!! ATCACTGTTAGTTTTTAGTG+TGG + chr4_2:46382654-46382673 Msa0602620:intron 30.0%
AGGAAGTTTAATTGTATGAG+TGG + chr4_2:46382876-46382895 Msa0602620:intron 30.0%
TGATTCATACAGCAAGTAAA+TGG - chr4_2:46383011-46383030 None:intergenic 30.0%
TGAAAACATTAGCAGTATGT+GGG + chr4_2:46383424-46383443 Msa0602620:CDS 30.0%
AGTAACTAGGTGGTTAATTT+GGG - chr4_2:46383557-46383576 None:intergenic 30.0%
AAGTAACTAGGTGGTTAATT+TGG - chr4_2:46383558-46383577 None:intergenic 30.0%
ATATCATCTGGAAAGTAACT+AGG - chr4_2:46383570-46383589 None:intergenic 30.0%
TTTCCAGATGATATTGCAAT+GGG + chr4_2:46383576-46383595 Msa0602620:intron 30.0%
TATTGCAATGGGTAAAGATT+TGG + chr4_2:46383587-46383606 Msa0602620:CDS 30.0%
AAGAGGACAGTGATAAAATT+AGG + chr4_2:46383760-46383779 Msa0602620:CDS 30.0%
! GAAAATCAGGGTACAAATTT+TGG + chr4_2:46383789-46383808 Msa0602620:CDS 30.0%
AGAGATTTGAACACTTCAAA+TGG + chr4_2:46383846-46383865 Msa0602620:CDS 30.0%
! AACACTTCAAATGGTTTTTC+TGG + chr4_2:46383855-46383874 Msa0602620:CDS 30.0%
! CTTTCAAATTTGCTCTTACT+TGG - chr4_2:46384027-46384046 None:intergenic 30.0%
CATCAATATATGCTTCCAAT+AGG - chr4_2:46384058-46384077 None:intergenic 30.0%
TTGATGCATAAGCATTACAT+TGG + chr4_2:46384072-46384091 Msa0602620:intron 30.0%
GTTATAAAATGACTGGGATT+TGG - chr4_2:46384265-46384284 None:intergenic 30.0%
TTGAAGACATTTGATATGCT+GGG - chr4_2:46384435-46384454 None:intergenic 30.0%
!!! ATTTTTTATCAGGCTCAAAC+TGG + chr4_2:46384590-46384609 Msa0602620:intron 30.0%
! GGTTTCTTGTCAAAATTTTC+GGG - chr4_2:46384779-46384798 None:intergenic 30.0%
! GGGTTTCTTGTCAAAATTTT+CGG - chr4_2:46384780-46384799 None:intergenic 30.0%
TGTACATTATCAAATGCGTT+TGG + chr4_2:46385070-46385089 Msa0602620:CDS 30.0%
GGTACAAATTATGGTTTGAA+TGG + chr4_2:46385112-46385131 Msa0602620:CDS 30.0%
GACAATCAGAATGATAAATG+TGG + chr4_2:46385189-46385208 Msa0602620:CDS 30.0%
GCAATTGAGAGAATAAACAT+TGG + chr4_2:46385250-46385269 Msa0602620:CDS 30.0%
! CTTTTGACGAAATTTTGTCA+AGG - chr4_2:46385317-46385336 None:intergenic 30.0%
AGAAAGATGCTTTGACAAAA+AGG + chr4_2:46385342-46385361 Msa0602620:CDS 30.0%
!!! GGTAATCTATTTTTATCACC+TGG + chr4_2:46385363-46385382 Msa0602620:intron 30.0%
!! CATGTGGATTTAGTTAGTTT+TGG + chr4_2:46385417-46385436 Msa0602620:intron 30.0%
ACAGAGAGATAAAAAACCAA+TGG - chr4_2:46385587-46385606 None:intergenic 30.0%
ATATCACAGCAGGAAAAAAT+TGG + chr4_2:46385815-46385834 Msa0602620:CDS 30.0%
TAAATACAAGCATACAAGCA+TGG - chr4_2:46385897-46385916 None:intergenic 30.0%
CAGTACTTAATACTTAGACA+AGG - chr4_2:46385945-46385964 None:intergenic 30.0%
CTTGTCTAAGTATTAAGTAC+TGG + chr4_2:46385943-46385962 Msa0602620:intron 30.0%
AGAAGAAAATAAAGAAAGCG+AGG + chr4_2:46386010-46386029 Msa0602620:CDS 30.0%
!!! CATTTTGATTGGTATTGTTG+TGG - chr4_2:46386068-46386087 None:intergenic 30.0%
TAATAGAAGAATCTGTGAGT+AGG + chr4_2:46386173-46386192 Msa0602620:three_prime_UTR 30.0%
! AATGCTCTAGATTCAGTTTA+TGG + chr4_2:46386248-46386267 Msa0602620:three_prime_UTR 30.0%
AGTGATTGTGTATCAAAATC+AGG + chr4_2:46386351-46386370 Msa0602620:three_prime_UTR 30.0%
GTGATTGTGTATCAAAATCA+GGG + chr4_2:46386352-46386371 Msa0602620:three_prime_UTR 30.0%
AATTATAGCTAAGGGAAAGG+AGG - chr4_2:46379057-46379076 None:intergenic 35.0%
GAGAATTATAGCTAAGGGAA+AGG - chr4_2:46379060-46379079 None:intergenic 35.0%
CTGGTAGAGAATTATAGCTA+AGG - chr4_2:46379066-46379085 None:intergenic 35.0%
CTTAATAGCAGAGACTGAAA+TGG + chr4_2:46379584-46379603 Msa0602620:five_prime_UTR 35.0%
GTTAACGTGGAATCAAACAT+AGG - chr4_2:46379637-46379656 None:intergenic 35.0%
GAAGTTAGAATCAATTCTGG+AGG - chr4_2:46379715-46379734 None:intergenic 35.0%
! AAAGTGAGTTGAACGTAAAG+TGG - chr4_2:46379825-46379844 None:intergenic 35.0%
AAGCTATCTTAGAGAGCTTA+AGG - chr4_2:46380419-46380438 None:intergenic 35.0%
! CTTTGTCGTGATTCTAAAAG+AGG - chr4_2:46380694-46380713 None:intergenic 35.0%
!!! CTCTTTTAGAATCACGACAA+AGG + chr4_2:46380692-46380711 Msa0602620:intron 35.0%
TATCCAGTTGACTGATAGAT+AGG + chr4_2:46380721-46380740 Msa0602620:intron 35.0%
ATCCAGTTGACTGATAGATA+GGG + chr4_2:46380722-46380741 Msa0602620:intron 35.0%
TTGTGTTTGCAGAACTTGAT+GGG + chr4_2:46380745-46380764 Msa0602620:intron 35.0%
AATCCACAATTCACTCAACA+AGG + chr4_2:46380789-46380808 Msa0602620:five_prime_UTR 35.0%
ATCCACAATTCACTCAACAA+GGG + chr4_2:46380790-46380809 Msa0602620:five_prime_UTR 35.0%
ACTCAAAAAACAACAAGGTG+AGG - chr4_2:46380843-46380862 None:intergenic 35.0%
!!! ACCTTGTTGTTTTTTGAGTG+TGG + chr4_2:46380844-46380863 Msa0602620:five_prime_UTR 35.0%
ACCACACTCAAAAAACAACA+AGG - chr4_2:46380848-46380867 None:intergenic 35.0%
TAACCAAAGATGGAAACAGT+GGG + chr4_2:46381030-46381049 Msa0602620:CDS 35.0%
TCGTAATCCAGTTACATACT+GGG + chr4_2:46381109-46381128 Msa0602620:CDS 35.0%
ATCAATAAAAGTTCTGCTGG+TGG + chr4_2:46381151-46381170 Msa0602620:CDS 35.0%
! TGTGCTTTGTTAAGGAATTG+TGG + chr4_2:46381203-46381222 Msa0602620:CDS 35.0%
TTAAGGAATTGTGGCTATGA+AGG + chr4_2:46381212-46381231 Msa0602620:CDS 35.0%
GCCTTTGAACTTTAAGTATC+TGG + chr4_2:46381271-46381290 Msa0602620:intron 35.0%
AACGGTGACATATATCAAAC+TGG - chr4_2:46381371-46381390 None:intergenic 35.0%
AGTTTGATATATGTCACCGT+TGG + chr4_2:46381370-46381389 Msa0602620:intron 35.0%
!! GCATTGACTGTAAATACCAA+CGG - chr4_2:46381389-46381408 None:intergenic 35.0%
ACAAGATCAATGTGATTTCC+TGG - chr4_2:46381452-46381471 None:intergenic 35.0%
! GATAGCTATGCCTTTTGTAA+CGG + chr4_2:46381481-46381500 Msa0602620:CDS 35.0%
! ATAGCTATGCCTTTTGTAAC+GGG + chr4_2:46381482-46381501 Msa0602620:CDS 35.0%
CAGAAATATGGTGCAAAGTT+TGG - chr4_2:46381585-46381604 None:intergenic 35.0%
GATGTCATGTCATGATTCTA+TGG + chr4_2:46381667-46381686 Msa0602620:CDS 35.0%
! TTTTAGTCAAACCTATTCGG+AGG + chr4_2:46381729-46381748 Msa0602620:CDS 35.0%
ATGTAAAGCAACTCACACTA+TGG - chr4_2:46381796-46381815 None:intergenic 35.0%
TTGCTTTACATTTCTGTCTC+AGG + chr4_2:46381805-46381824 Msa0602620:intron 35.0%
CATGATGTTGTAGGAACTAT+TGG - chr4_2:46381922-46381941 None:intergenic 35.0%
ATCAATGGCATTCCTTAACA+TGG + chr4_2:46382299-46382318 Msa0602620:intron 35.0%
TCAATGGCATTCCTTAACAT+GGG + chr4_2:46382300-46382319 Msa0602620:intron 35.0%
CTTTCTCAGTCTAATGATAG+TGG + chr4_2:46382331-46382350 Msa0602620:intron 35.0%
! TCTTGACTTTGCGAATTTTC+GGG - chr4_2:46382377-46382396 None:intergenic 35.0%
TGTGCATTTGACAACAATAC+TGG + chr4_2:46382403-46382422 Msa0602620:CDS 35.0%
AGCAGTGATGAGAATGATTA+TGG + chr4_2:46382427-46382446 Msa0602620:CDS 35.0%
ACATGATATTGCTCGAAAAG+TGG - chr4_2:46382578-46382597 None:intergenic 35.0%
! TAATGGGTATCCTTCTTTGT+TGG + chr4_2:46382944-46382963 Msa0602620:intron 35.0%
AATGGGTATCCTTCTTTGTT+GGG + chr4_2:46382945-46382964 Msa0602620:intron 35.0%
GTAATTATTGTCAGGAACTG+AGG + chr4_2:46383109-46383128 Msa0602620:intron 35.0%
ACTGAGGATAGAATGATGAA+TGG + chr4_2:46383125-46383144 Msa0602620:intron 35.0%
CCATGAACTCTACACAAAAT+AGG - chr4_2:46383297-46383316 None:intergenic 35.0%
! CCTATTTTGTGTAGAGTTCA+TGG + chr4_2:46383294-46383313 Msa0602620:intron 35.0%
! CACATACTGCTAATGTTTTC+AGG - chr4_2:46383425-46383444 None:intergenic 35.0%
CTGAAAACATTAGCAGTATG+TGG + chr4_2:46383423-46383442 Msa0602620:CDS 35.0%
! TTCATGGAACTCTTTTTCTG+TGG - chr4_2:46383456-46383475 None:intergenic 35.0%
! CAAGATGATCAATTGGTTCA+TGG - chr4_2:46383472-46383491 None:intergenic 35.0%
CATGAACCAATTGATCATCT+TGG + chr4_2:46383470-46383489 Msa0602620:CDS 35.0%
AACAGAAAAGGATACTACCA+AGG - chr4_2:46383500-46383519 None:intergenic 35.0%
CTTTCCAGATGATATTGCAA+TGG + chr4_2:46383575-46383594 Msa0602620:intron 35.0%
TTACCCATTGCAATATCATC+TGG - chr4_2:46383582-46383601 None:intergenic 35.0%
AATGGGTAAAGATTTGGCTA+TGG + chr4_2:46383593-46383612 Msa0602620:CDS 35.0%
ATGGGTAAAGATTTGGCTAT+GGG + chr4_2:46383594-46383613 Msa0602620:CDS 35.0%
TCTAACAATCCAATGCGTAA+AGG + chr4_2:46383660-46383679 Msa0602620:CDS 35.0%
CTAACAATCCAATGCGTAAA+GGG + chr4_2:46383661-46383680 Msa0602620:CDS 35.0%
TAACAATCCAATGCGTAAAG+GGG + chr4_2:46383662-46383681 Msa0602620:CDS 35.0%
TTATTAACCCCTTTACGCAT+TGG - chr4_2:46383672-46383691 None:intergenic 35.0%
! TCTCTGTGAAAAAGTACAAC+TGG + chr4_2:46383737-46383756 Msa0602620:CDS 35.0%
! TGAAAAAGTACAACTGGAAG+AGG + chr4_2:46383743-46383762 Msa0602620:CDS 35.0%
CAGTGATAAAATTAGGATGC+AGG + chr4_2:46383767-46383786 Msa0602620:CDS 35.0%
AATTAGGATGCAGGAAAATC+AGG + chr4_2:46383776-46383795 Msa0602620:CDS 35.0%
ATTAGGATGCAGGAAAATCA+GGG + chr4_2:46383777-46383796 Msa0602620:CDS 35.0%
TCCATCACTTGAACTAACAT+TGG + chr4_2:46383917-46383936 Msa0602620:CDS 35.0%
TCCAATGTTAGTTCAAGTGA+TGG - chr4_2:46383921-46383940 None:intergenic 35.0%
CACTTGAACTAACATTGGAA+AGG + chr4_2:46383922-46383941 Msa0602620:CDS 35.0%
TGAACTAACATTGGAAAGGA+TGG + chr4_2:46383926-46383945 Msa0602620:CDS 35.0%
GAACTAACATTGGAAAGGAT+GGG + chr4_2:46383927-46383946 Msa0602620:CDS 35.0%
!! TTGAAAGCATTACCACCTAT+TGG + chr4_2:46384040-46384059 Msa0602620:intron 35.0%
CAATATATGCTTCCAATAGG+TGG - chr4_2:46384055-46384074 None:intergenic 35.0%
GCTGTATTATATCTGCAGAA+TGG - chr4_2:46384138-46384157 None:intergenic 35.0%
TGAAGACATTTGATATGCTG+GGG - chr4_2:46384434-46384453 None:intergenic 35.0%
GTTGAAGACATTTGATATGC+TGG - chr4_2:46384436-46384455 None:intergenic 35.0%
! ACACACTATTTTCCAGCAAT+TGG - chr4_2:46384528-46384547 None:intergenic 35.0%
TAGACCCAAATCTCAATGTT+TGG + chr4_2:46384547-46384566 Msa0602620:intron 35.0%
AGACCCAAATCTCAATGTTT+GGG + chr4_2:46384548-46384567 Msa0602620:intron 35.0%
TTGCCCAAACATTGAGATTT+GGG - chr4_2:46384554-46384573 None:intergenic 35.0%
TTTGCCCAAACATTGAGATT+TGG - chr4_2:46384555-46384574 None:intergenic 35.0%
TTGTGTGTTGTCTCTGTAAT+TGG - chr4_2:46384659-46384678 None:intergenic 35.0%
!! TTCCATTAGACTGCTGATTT+GGG - chr4_2:46384706-46384725 None:intergenic 35.0%
GATATGTATTAGTGGAAGTC+AGG - chr4_2:46384745-46384764 None:intergenic 35.0%
CGTGCTAAGATATGTATTAG+TGG - chr4_2:46384753-46384772 None:intergenic 35.0%
GTAAGAGATCATGAACTGAT+TGG - chr4_2:46385021-46385040 None:intergenic 35.0%
ACATTATCAAATGCGTTTGG+AGG + chr4_2:46385073-46385092 Msa0602620:CDS 35.0%
CATTATCAAATGCGTTTGGA+GGG + chr4_2:46385074-46385093 Msa0602620:CDS 35.0%
TTTGTACCATTACTTTCTGC+TGG - chr4_2:46385100-46385119 None:intergenic 35.0%
GAGAGAATAAACATTGGAAG+TGG + chr4_2:46385256-46385275 Msa0602620:CDS 35.0%
ATGAAGAACGAATTGCATTG+AGG + chr4_2:46385284-46385303 Msa0602620:CDS 35.0%
TGAAGAACGAATTGCATTGA+GGG + chr4_2:46385285-46385304 Msa0602620:CDS 35.0%
CTGAAGATCATAATAGCATG+TGG + chr4_2:46385401-46385420 Msa0602620:intron 35.0%
TCAGAATCTTCCATTTAGGT+GGG - chr4_2:46385517-46385536 None:intergenic 35.0%
ATCAGAATCTTCCATTTAGG+TGG - chr4_2:46385518-46385537 None:intergenic 35.0%
AACATTACCGACATGAACAT+GGG - chr4_2:46386300-46386319 None:intergenic 35.0%
AAACATTACCGACATGAACA+TGG - chr4_2:46386301-46386320 None:intergenic 35.0%
GCAGAATATAGACATGAACA+AGG - chr4_2:46386327-46386346 None:intergenic 35.0%
! CCTCATACTTTAGTTTCTAG+AGG - chr4_2:46386407-46386426 None:intergenic 35.0%
! CCTCTAGAAACTAAAGTATG+AGG + chr4_2:46386404-46386423 Msa0602620:three_prime_UTR 35.0%
! GGAAAAGTATGAAATGTGCA+AGG - chr4_2:46386527-46386546 None:intergenic 35.0%
!! AGGGTTTTAATGTGATGAGG+TGG - chr4_2:46378904-46378923 None:intergenic 40.0%
!! GAGAGGGTTTTAATGTGATG+AGG - chr4_2:46378907-46378926 None:intergenic 40.0%
TTATTTGGAAGAAGGTGACG+TGG - chr4_2:46378986-46379005 None:intergenic 40.0%
GTTTGATTCCACGTTAACAG+CGG + chr4_2:46379639-46379658 Msa0602620:five_prime_UTR 40.0%
!!! ACCTGTCATTTTAGTGCATC+TGG + chr4_2:46379980-46379999 Msa0602620:five_prime_UTR 40.0%
ACCAGATGCACTAAAATGAC+AGG - chr4_2:46379984-46380003 None:intergenic 40.0%
!! AGTGCATCTGGTGTTATGTA+AGG + chr4_2:46379992-46380011 Msa0602620:five_prime_UTR 40.0%
AAAGCTTCTGTCTTAGCACA+AGG - chr4_2:46380126-46380145 None:intergenic 40.0%
! TGCTAAGACAGAAGCTTTGA+GGG + chr4_2:46380128-46380147 Msa0602620:five_prime_UTR 40.0%
AATGAAACGACAAGCTGTTG+CGG - chr4_2:46380164-46380183 None:intergenic 40.0%
TTTCATTTCTATCTGGGTGC+TGG + chr4_2:46380221-46380240 Msa0602620:five_prime_UTR 40.0%
AACCCTATCTATCAGTCAAC+TGG - chr4_2:46380727-46380746 None:intergenic 40.0%
GTTGTGTTTGCAGAACTTGA+TGG + chr4_2:46380744-46380763 Msa0602620:intron 40.0%
TCCACAATTCACTCAACAAG+GGG + chr4_2:46380791-46380810 Msa0602620:five_prime_UTR 40.0%
AATTCACTCAACAAGGGGAT+TGG + chr4_2:46380796-46380815 Msa0602620:five_prime_UTR 40.0%
ATTCACTCAACAAGGGGATT+GGG + chr4_2:46380797-46380816 Msa0602620:five_prime_UTR 40.0%
GTAACCAAAGATGGAAACAG+TGG + chr4_2:46381029-46381048 Msa0602620:CDS 40.0%
!! GATCGATTCGAATCAATGAG+AGG + chr4_2:46381060-46381079 Msa0602620:CDS 40.0%
TATGTAACTGGATTACGAGG+TGG - chr4_2:46381107-46381126 None:intergenic 40.0%
CAGTATGTAACTGGATTACG+AGG - chr4_2:46381110-46381129 None:intergenic 40.0%
CTCGTAATCCAGTTACATAC+TGG + chr4_2:46381108-46381127 Msa0602620:CDS 40.0%
! ACGTTGTGTGTGCTTTGTTA+AGG + chr4_2:46381195-46381214 Msa0602620:CDS 40.0%
!! ACAGTCAATGCTGTTTCCAA+TGG + chr4_2:46381398-46381417 Msa0602620:intron 40.0%
TGTGATTTCCTGGATCTTCT+AGG - chr4_2:46381442-46381461 None:intergenic 40.0%
!! ATGCCTTTTGTAACGGGAAT+AGG + chr4_2:46381488-46381507 Msa0602620:CDS 40.0%
AGACCTATTCCCGTTACAAA+AGG - chr4_2:46381494-46381513 None:intergenic 40.0%
GAATGGCACTTACTAATCAC+AGG - chr4_2:46381557-46381576 None:intergenic 40.0%
! TGCAAAGTTTGGGTTTGGAA+TGG - chr4_2:46381574-46381593 None:intergenic 40.0%
! TATGGTGCAAAGTTTGGGTT+TGG - chr4_2:46381579-46381598 None:intergenic 40.0%
TTAAGTTCGTTCCTCCGAAT+AGG - chr4_2:46381743-46381762 None:intergenic 40.0%
GGAACGAACTTAAAAACCTC+TGG + chr4_2:46381750-46381769 Msa0602620:CDS 40.0%
AAAACCTCTGGCAACATGTT+TGG + chr4_2:46381762-46381781 Msa0602620:CDS 40.0%
!! ATGTTGTTTCCCAGCTCATT+TGG + chr4_2:46381849-46381868 Msa0602620:intron 40.0%
CACTTTGTTCCAAATGAGCT+GGG - chr4_2:46381861-46381880 None:intergenic 40.0%
ACACTTTGTTCCAAATGAGC+TGG - chr4_2:46381862-46381881 None:intergenic 40.0%
!! AATGATAGTGGGAGTGAAAG+TGG + chr4_2:46382343-46382362 Msa0602620:CDS 40.0%
GAGAATGATTATGGAAGCAG+AGG + chr4_2:46382436-46382455 Msa0602620:CDS 40.0%
GTTCAAGATGGAAGTGACAA+TGG + chr4_2:46382466-46382485 Msa0602620:CDS 40.0%
!! CTCGAAAAGTGGCTTTAGAT+GGG - chr4_2:46382567-46382586 None:intergenic 40.0%
ATGGGATAGTTGACACCAAT+AGG + chr4_2:46382856-46382875 Msa0602620:intron 40.0%
ATTAGGGGAAATCACAGTCT+AGG - chr4_2:46383248-46383267 None:intergenic 40.0%
GATTGATTAGGAGGTGAAAC+TGG - chr4_2:46383356-46383375 None:intergenic 40.0%
GCATCATGAGATTGATTAGG+AGG - chr4_2:46383365-46383384 None:intergenic 40.0%
! GGAGCATCATGAGATTGATT+AGG - chr4_2:46383368-46383387 None:intergenic 40.0%
GGCATACCAAGATGATCAAT+TGG - chr4_2:46383479-46383498 None:intergenic 40.0%
TTGATCATCTTGGTATGCCT+TGG + chr4_2:46383480-46383499 Msa0602620:intron 40.0%
TCATCTGGAAAGTAACTAGG+TGG - chr4_2:46383567-46383586 None:intergenic 40.0%
GATGGTATGCAGCACAATAA+AGG + chr4_2:46383705-46383724 Msa0602620:CDS 40.0%
AAATCTCTGCTTTCAGCATG+TGG - chr4_2:46383834-46383853 None:intergenic 40.0%
AAAGATGACGAACATGTCAC+AGG + chr4_2:46383957-46383976 Msa0602620:CDS 40.0%
TAATACAGCTTCTGCTTACC+AGG + chr4_2:46384149-46384168 Msa0602620:CDS 40.0%
GTCCTTACTTCTTCAATAGC+AGG + chr4_2:46384184-46384203 Msa0602620:intron 40.0%
CTCCTGCTATTGAAGAAGTA+AGG - chr4_2:46384189-46384208 None:intergenic 40.0%
! TTTGGTTTCAAAGAGCCTAG+CGG + chr4_2:46384352-46384371 Msa0602620:intron 40.0%
AGTGCATCTCAGATGGTAAA+AGG - chr4_2:46384458-46384477 None:intergenic 40.0%
TACAGTGACAAACAAATGCC+AGG + chr4_2:46384501-46384520 Msa0602620:intron 40.0%
! TATTTTCCAGCAATTGGTCC+TGG - chr4_2:46384522-46384541 None:intergenic 40.0%
AACTGAGCTATTGTCTAGTG+GGG - chr4_2:46384633-46384652 None:intergenic 40.0%
CAACTGAGCTATTGTCTAGT+GGG - chr4_2:46384634-46384653 None:intergenic 40.0%
!! TCCATTAGACTGCTGATTTG+GGG - chr4_2:46384705-46384724 None:intergenic 40.0%
! CTTCCATTAGACTGCTGATT+TGG - chr4_2:46384707-46384726 None:intergenic 40.0%
! ATAGTATTTCTGCACCTCAG+AGG + chr4_2:46384858-46384877 Msa0602620:CDS 40.0%
GAATATGCCGGAATCGTTAA+AGG + chr4_2:46384899-46384918 Msa0602620:CDS 40.0%
TTGTAATCACATTGCCGACA+AGG + chr4_2:46384982-46385001 Msa0602620:CDS 40.0%
TGTACATTGCTGAGCATCTT+TGG - chr4_2:46385056-46385075 None:intergenic 40.0%
AAAATCGTGATGTGACAGCT+GGG + chr4_2:46385212-46385231 Msa0602620:CDS 40.0%
CAGCAAACACATTATGAACC+AGG - chr4_2:46385384-46385403 None:intergenic 40.0%
TTGTTGAGATCCCACCTAAA+TGG + chr4_2:46385504-46385523 Msa0602620:intron 40.0%
! TTCAGGTTAGATATCACAGC+AGG + chr4_2:46385805-46385824 Msa0602620:intron 40.0%
GGAAAAAATTGGCAGATCAG+CGG + chr4_2:46385826-46385845 Msa0602620:CDS 40.0%
TTCTTTGGTATCAGACCTGA+GGG - chr4_2:46385991-46386010 None:intergenic 40.0%
AAGCGAGGAACTTGTATCTA+TGG + chr4_2:46386025-46386044 Msa0602620:CDS 40.0%
AGAAGAATCTGTGAGTAGGT+AGG + chr4_2:46386177-46386196 Msa0602620:three_prime_UTR 40.0%
ACATTACCGACATGAACATG+GGG - chr4_2:46386299-46386318 None:intergenic 40.0%
ATTCCATGTTGGATCTGACG+TGG - chr4_2:46378936-46378955 None:intergenic 45.0%
! GGACAAAATGGAGGTGTGAA+TGG - chr4_2:46378965-46378984 None:intergenic 45.0%
AGAAGGTGACGTGGACAAAA+TGG - chr4_2:46378977-46378996 None:intergenic 45.0%
GAGAGAGAGAGAGAGATAGT+GGG - chr4_2:46379017-46379036 None:intergenic 45.0%
AGAGAGAGAGAGAGAGATAG+TGG - chr4_2:46379018-46379037 None:intergenic 45.0%
!! GCATCTGGTGTTATGTAAGG+TGG + chr4_2:46379995-46380014 Msa0602620:five_prime_UTR 45.0%
GTGCTAAGACAGAAGCTTTG+AGG + chr4_2:46380127-46380146 Msa0602620:five_prime_UTR 45.0%
TTTGCTCCCCATGATAAGTG+TGG + chr4_2:46380605-46380624 Msa0602620:five_prime_UTR 45.0%
TTGCTCCCCATGATAAGTGT+GGG + chr4_2:46380606-46380625 Msa0602620:five_prime_UTR 45.0%
GTTTGTTTCGATCTCTTGGG+TGG + chr4_2:46380644-46380663 Msa0602620:five_prime_UTR 45.0%
AAGAGGAAAGACCGATACCT+GGG - chr4_2:46380677-46380696 None:intergenic 45.0%
AAAGAGGAAAGACCGATACC+TGG - chr4_2:46380678-46380697 None:intergenic 45.0%
! TGGGTGAAGTGCTCATGATA+CGG + chr4_2:46380764-46380783 Msa0602620:five_prime_UTR 45.0%
TCCCCTTGTTGAGTGAATTG+TGG - chr4_2:46380795-46380814 None:intergenic 45.0%
CAACAAGGTGAGGACTTATC+AGG - chr4_2:46380833-46380852 None:intergenic 45.0%
AGAGTAGTTAATGAAGGGCC+AGG + chr4_2:46380966-46380985 Msa0602620:CDS 45.0%
GAGTAGTTAATGAAGGGCCA+GGG + chr4_2:46380967-46380986 Msa0602620:CDS 45.0%
CAACCCACTGTTTCCATCTT+TGG - chr4_2:46381036-46381055 None:intergenic 45.0%
!! AGATGGAAACAGTGGGTTGA+AGG + chr4_2:46381037-46381056 Msa0602620:CDS 45.0%
!! GATGGAAACAGTGGGTTGAA+GGG + chr4_2:46381038-46381057 Msa0602620:CDS 45.0%
TTTCCAATGGTCTTCAAGCG+TGG + chr4_2:46381411-46381430 Msa0602620:CDS 45.0%
TTTCCACGCTTGAAGACCAT+TGG - chr4_2:46381417-46381436 None:intergenic 45.0%
TGGAAAGTCCTAGAAGATCC+AGG + chr4_2:46381431-46381450 Msa0602620:CDS 45.0%
TTCTCCAAACATGTTGCCAG+AGG - chr4_2:46381769-46381788 None:intergenic 45.0%
AGAGGCTTGAGTGTTCAAGA+TGG + chr4_2:46382454-46382473 Msa0602620:CDS 45.0%
GATGGAAGTGACAATGGAAG+TGG + chr4_2:46382472-46382491 Msa0602620:CDS 45.0%
TGACAATGGAAGTGGAACTC+AGG + chr4_2:46382480-46382499 Msa0602620:CDS 45.0%
!! GCTCGAAAAGTGGCTTTAGA+TGG - chr4_2:46382568-46382587 None:intergenic 45.0%
CTATGTTAACCCTCTGTAGG+TGG - chr4_2:46382972-46382991 None:intergenic 45.0%
TCGCTATGTTAACCCTCTGT+AGG - chr4_2:46382975-46382994 None:intergenic 45.0%
ACAGAGGGTTAACATAGCGA+AGG + chr4_2:46382975-46382994 Msa0602620:intron 45.0%
TAGGAGGTGAAACTGGATGA+GGG - chr4_2:46383349-46383368 None:intergenic 45.0%
TTAGGAGGTGAAACTGGATG+AGG - chr4_2:46383350-46383369 None:intergenic 45.0%
! AGGCTTTGTATGCACCACTT+GGG - chr4_2:46383405-46383424 None:intergenic 45.0%
! GGAACTCTTTTTCTGTGGCA+TGG - chr4_2:46383451-46383470 None:intergenic 45.0%
! GCAACAAAAGCATGCACTTG+AGG + chr4_2:46383632-46383651 Msa0602620:CDS 45.0%
GCTTACCAGGTAATGTTCTG+TGG + chr4_2:46384162-46384181 Msa0602620:intron 45.0%
AAGGACCACAGAACATTACC+TGG - chr4_2:46384170-46384189 None:intergenic 45.0%
ACACACTAAGTGCGAAGAAG+AGG + chr4_2:46384385-46384404 Msa0602620:intron 45.0%
CACACTAAGTGCGAAGAAGA+GGG + chr4_2:46384386-46384405 Msa0602620:intron 45.0%
ACACTAAGTGCGAAGAAGAG+GGG + chr4_2:46384387-46384406 Msa0602620:intron 45.0%
CAGGCTCAAACTGGAAATGT+AGG + chr4_2:46384599-46384618 Msa0602620:intron 45.0%
GCAACTGAGCTATTGTCTAG+TGG - chr4_2:46384635-46384654 None:intergenic 45.0%
!! ATTAGACTGCTGATTTGGGG+TGG - chr4_2:46384702-46384721 None:intergenic 45.0%
ACCCCAAATCAGCAGTCTAA+TGG + chr4_2:46384701-46384720 Msa0602620:CDS 45.0%
TCTTCCCAGGATGAATATGC+CGG + chr4_2:46384887-46384906 Msa0602620:CDS 45.0%
GATTCCGGCATATTCATCCT+GGG - chr4_2:46384894-46384913 None:intergenic 45.0%
CACCTGTCCTTTAACGATTC+CGG - chr4_2:46384909-46384928 None:intergenic 45.0%
GATGCTGAGTGTGCTCAATT+TGG - chr4_2:46384952-46384971 None:intergenic 45.0%
GAAAATCGTGATGTGACAGC+TGG + chr4_2:46385211-46385230 Msa0602620:CDS 45.0%
AGAACGAATTGCATTGAGGG+AGG + chr4_2:46385288-46385307 Msa0602620:CDS 45.0%
ATGCTCAGTGCTCAAGTCAA+TGG + chr4_2:46385695-46385714 Msa0602620:intron 45.0%
ACAAATTGTCCCCTAACACG+TGG - chr4_2:46385852-46385871 None:intergenic 45.0%
TTCTGTCCATTCTTTCCCTC+AGG + chr4_2:46385973-46385992 Msa0602620:intron 45.0%
ATCAGACCTGAGGGAAAGAA+TGG - chr4_2:46385982-46386001 None:intergenic 45.0%
CTTCTTTGGTATCAGACCTG+AGG - chr4_2:46385992-46386011 None:intergenic 45.0%
AAGAAGCTAGATGCAGTTGC+TGG - chr4_2:46386117-46386136 None:intergenic 45.0%
AAAACTCCAAGCTTCTTCCG+AGG - chr4_2:46386150-46386169 None:intergenic 45.0%
AATGGACCCCATGTTCATGT+CGG + chr4_2:46386290-46386309 Msa0602620:three_prime_UTR 45.0%
!!! CTATTTTTTATTTTTTTTTT+TGG + chr4_2:46379266-46379285 Msa0602620:five_prime_UTR 5.0%
TTGCCACGTCAGATCCAACA+TGG + chr4_2:46378930-46378949 Msa0602620:five_prime_UTR 50.0%
AGGTGACGTGGACAAAATGG+AGG - chr4_2:46378974-46378993 None:intergenic 50.0%
AATTCTGGCCGCTGTTAACG+TGG - chr4_2:46379650-46379669 None:intergenic 50.0%
!! ATCTGGGTGCTGGAATTCAG+AGG + chr4_2:46380231-46380250 Msa0602620:five_prime_UTR 50.0%
! GGTGCTGGAATTCAGAGGTA+TGG + chr4_2:46380236-46380255 Msa0602620:five_prime_UTR 50.0%
TGCTCCCCATGATAAGTGTG+GGG + chr4_2:46380607-46380626 Msa0602620:five_prime_UTR 50.0%
ACACCCCCACACTTATCATG+GGG - chr4_2:46380614-46380633 None:intergenic 50.0%
CACACCCCCACACTTATCAT+GGG - chr4_2:46380615-46380634 None:intergenic 50.0%
TCACACCCCCACACTTATCA+TGG - chr4_2:46380616-46380635 None:intergenic 50.0%
AGAGGAAAGACCGATACCTG+GGG - chr4_2:46380676-46380695 None:intergenic 50.0%
!! CCAGTTGATGATTCAGACCC+TGG - chr4_2:46380987-46381006 None:intergenic 50.0%
CCAGGGTCTGAATCATCAAC+TGG + chr4_2:46380984-46381003 Msa0602620:CDS 50.0%
GTAACTGGATTACGAGGTGG+TGG - chr4_2:46381104-46381123 None:intergenic 50.0%
! TTGTAGTCTTGCGTGCTGAC+TGG - chr4_2:46382690-46382709 None:intergenic 50.0%
GTAGGTGGACCCAACAAAGA+AGG - chr4_2:46382957-46382976 None:intergenic 50.0%
TTTGTTGGGTCCACCTACAG+AGG + chr4_2:46382959-46382978 Msa0602620:intron 50.0%
TTGTTGGGTCCACCTACAGA+GGG + chr4_2:46382960-46382979 Msa0602620:intron 50.0%
! CAGGCTTTGTATGCACCACT+TGG - chr4_2:46383406-46383425 None:intergenic 50.0%
TGTGTGTGAATTTCGCCGCT+AGG - chr4_2:46384370-46384389 None:intergenic 50.0%
!! TGCGAAGAAGAGGGGTATTG+CGG + chr4_2:46384395-46384414 Msa0602620:intron 50.0%
ACATTTGATATGCTGGGGCG+CGG - chr4_2:46384429-46384448 None:intergenic 50.0%
CAAATGCCAGGACCAATTGC+TGG + chr4_2:46384513-46384532 Msa0602620:intron 50.0%
GACAAGAAACCCGAGTCTTC+TGG + chr4_2:46384788-46384807 Msa0602620:CDS 50.0%
AAGAAACCCGAGTCTTCTGG+AGG + chr4_2:46384791-46384810 Msa0602620:CDS 50.0%
AGAAACCCGAGTCTTCTGGA+GGG + chr4_2:46384792-46384811 Msa0602620:CDS 50.0%
TGGGAAGAAGTCTTCCTCTG+AGG - chr4_2:46384875-46384894 None:intergenic 50.0%
TCAGAGGAAGACTTCTTCCC+AGG + chr4_2:46384874-46384893 Msa0602620:CDS 50.0%
CGATTCCGGCATATTCATCC+TGG - chr4_2:46384895-46384914 None:intergenic 50.0%
TGCCGGAATCGTTAAAGGAC+AGG + chr4_2:46384904-46384923 Msa0602620:CDS 50.0%
ATCGTTAAAGGACAGGTGCG+AGG + chr4_2:46384911-46384930 Msa0602620:CDS 50.0%
AGTGCAGCTGAGAGTGATCA+CGG + chr4_2:46385136-46385155 Msa0602620:CDS 50.0%
GAGAGTGATCACGGGAGTAA+TGG + chr4_2:46385145-46385164 Msa0602620:CDS 50.0%
!! TGATCACGGGAGTAATGGAC+AGG + chr4_2:46385150-46385169 Msa0602620:CDS 50.0%
GCTTCTTTGCACGTTCACCT+CGG + chr4_2:46386130-46386149 Msa0602620:three_prime_UTR 50.0%
GACATGAACATGGGGTCCAT+TGG - chr4_2:46386291-46386310 None:intergenic 50.0%
TCTGACGTGGCAAAGCGAGA+GGG - chr4_2:46378923-46378942 None:intergenic 55.0%
ATCTGACGTGGCAAAGCGAG+AGG - chr4_2:46378924-46378943 None:intergenic 55.0%
GCTCCCCATGATAAGTGTGG+GGG + chr4_2:46380608-46380627 Msa0602620:five_prime_UTR 55.0%
GTGGAGTAAGCCCCAGGTAT+CGG + chr4_2:46380663-46380682 Msa0602620:intron 55.0%
ACTTGGGCACACGTGCTATC+AGG - chr4_2:46383389-46383408 None:intergenic 55.0%
TGATAGCACGTGTGCCCAAG+TGG + chr4_2:46383388-46383407 Msa0602620:CDS 55.0%
!! GCGAAGAAGAGGGGTATTGC+GGG + chr4_2:46384396-46384415 Msa0602620:intron 55.0%
CATTTGATATGCTGGGGCGC+GGG - chr4_2:46384428-46384447 None:intergenic 55.0%
CCTCGCAAGTGCATCTCAGA+TGG - chr4_2:46384465-46384484 None:intergenic 55.0%
! CCATCTGAGATGCACTTGCG+AGG + chr4_2:46384462-46384481 Msa0602620:intron 55.0%
CCAATCCCTCCAGAAGACTC+GGG - chr4_2:46384800-46384819 None:intergenic 55.0%
GCCAATCCCTCCAGAAGACT+CGG - chr4_2:46384801-46384820 None:intergenic 55.0%
!! CAGGTGCGAGGTTCTGAACA+AGG + chr4_2:46384923-46384942 Msa0602620:CDS 55.0%
! GAGATCCACTGCAGCCTTGT+CGG - chr4_2:46384999-46385018 None:intergenic 55.0%
GGAGGGCCAGCAGAAAGTAA+TGG + chr4_2:46385091-46385110 Msa0602620:CDS 55.0%
GTGCAGCTGAGAGTGATCAC+GGG + chr4_2:46385137-46385156 Msa0602620:CDS 55.0%
!! CACGGGAGTAATGGACAGGA+AGG + chr4_2:46385154-46385173 Msa0602620:CDS 55.0%
! GATGTGACAGCTGGGAGCAT+TGG + chr4_2:46385220-46385239 Msa0602620:CDS 55.0%
!! ACAGCTGGGAGCATTGGAGT+TGG + chr4_2:46385226-46385245 Msa0602620:CDS 55.0%
AGATCAGCGGCCACGTGTTA+GGG + chr4_2:46385839-46385858 Msa0602620:CDS 55.0%
CGTTCACCTCGGAAGAAGCT+TGG + chr4_2:46386141-46386160 Msa0602620:three_prime_UTR 55.0%
TCTTGGGTGGAGTAAGCCCC+AGG + chr4_2:46380657-46380676 Msa0602620:five_prime_UTR 60.0%
TGAGATGCACTTGCGAGGCG+TGG + chr4_2:46384467-46384486 Msa0602620:intron 60.0%
! CCCGAGTCTTCTGGAGGGAT+TGG + chr4_2:46384797-46384816 Msa0602620:CDS 60.0%
CATTGCCGACAAGGCTGCAG+TGG + chr4_2:46384991-46385010 Msa0602620:CDS 60.0%
CAGATCAGCGGCCACGTGTT+AGG + chr4_2:46385838-46385857 Msa0602620:CDS 60.0%
GATCAGCGGCCACGTGTTAG+GGG + chr4_2:46385840-46385859 Msa0602620:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 46378897 46386546 46378897 ID=Msa0602620;Name=Msa0602620
chr4_2 mRNA 46378897 46386546 46378897 ID=Msa0602620-mRNA-1;Parent=Msa0602620;Name=Msa0602620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1896|1|1|1|0.81|0.75|12|455|795
chr4_2 exon 46378897 46379017 46378897 ID=Msa0602620-mRNA-1:exon:10492;Parent=Msa0602620-mRNA-1
chr4_2 exon 46379038 46380678 46379038 ID=Msa0602620-mRNA-1:exon:10493;Parent=Msa0602620-mRNA-1
chr4_2 exon 46380757 46381233 46380757 ID=Msa0602620-mRNA-1:exon:10494;Parent=Msa0602620-mRNA-1
chr4_2 exon 46381402 46381563 46381402 ID=Msa0602620-mRNA-1:exon:10495;Parent=Msa0602620-mRNA-1
chr4_2 exon 46381666 46381799 46381666 ID=Msa0602620-mRNA-1:exon:10496;Parent=Msa0602620-mRNA-1
chr4_2 exon 46382340 46382501 46382340 ID=Msa0602620-mRNA-1:exon:10497;Parent=Msa0602620-mRNA-1
chr4_2 exon 46383308 46383491 46383308 ID=Msa0602620-mRNA-1:exon:10498;Parent=Msa0602620-mRNA-1
chr4_2 exon 46383583 46384027 46383583 ID=Msa0602620-mRNA-1:exon:10499;Parent=Msa0602620-mRNA-1
chr4_2 exon 46384146 46384170 46384146 ID=Msa0602620-mRNA-1:exon:10500;Parent=Msa0602620-mRNA-1
chr4_2 exon 46384602 46385363 46384602 ID=Msa0602620-mRNA-1:exon:10501;Parent=Msa0602620-mRNA-1
chr4_2 exon 46385810 46385883 46385810 ID=Msa0602620-mRNA-1:exon:10502;Parent=Msa0602620-mRNA-1
chr4_2 exon 46385995 46386546 46385995 ID=Msa0602620-mRNA-1:exon:10503;Parent=Msa0602620-mRNA-1
chr4_2 five_prime_UTR 46378897 46379017 46378897 ID=Msa0602620-mRNA-1:five_prime_utr;Parent=Msa0602620-mRNA-1
chr4_2 five_prime_UTR 46379038 46380678 46379038 ID=Msa0602620-mRNA-1:five_prime_utr;Parent=Msa0602620-mRNA-1
chr4_2 five_prime_UTR 46380757 46380890 46380757 ID=Msa0602620-mRNA-1:five_prime_utr;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46380891 46381233 46380891 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46381402 46381563 46381402 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46381666 46381799 46381666 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46382340 46382501 46382340 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46383308 46383491 46383308 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46383583 46384027 46383583 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46384146 46384170 46384146 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46384602 46385363 46384602 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46385810 46385883 46385810 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 CDS 46385995 46386091 46385995 ID=Msa0602620-mRNA-1:cds;Parent=Msa0602620-mRNA-1
chr4_2 three_prime_UTR 46386092 46386546 46386092 ID=Msa0602620-mRNA-1:three_prime_utr;Parent=Msa0602620-mRNA-1
Gene Sequence

>Msa0602620

ATGAACAATAATGTTGGGAAACAAAGTTTGGCAGAACAAAATCACGCTCTTAATGACAGAAAGAGTCTCAATAATAGAGTAGTTAATGAAGGGCCAGGGTCTGAATCATCAACTGGAAATGACACTAGATTTAGTAAGGTAACCAAAGATGGAAACAGTGGGTTGAAGGGATCGATTCGAATCAATGAGAGGTTGCAGATTTCACAACAACCACCACCTCGTAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGCAACGTTGTGTGTGCTTTGTTAAGGAATTGTGGCTATGAAGTCAATGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCCTAGAAGATCCAGGAAATCACATTGATCTTGTTCTAACAGAGATAGCTATGCCTTTTGTAACGGGAATAGGTCTTTTGTGCAAGATAATGAGTCACAAAACTCTAAAGAATATTCCTGTGATTATGATGTCATGTCATGATTCTATGGGTATAGTGTTTAAGTGTTTGTCAAAAGGCGCAGCTGATTTTTTAGTCAAACCTATTCGGAGGAACGAACTTAAAAACCTCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAATGATAGTGGGAGTGAAAGTGGAACAAACACCCGAAAATTCGCAAAGTCAAGAAGCATCTGTGCATTTGACAACAATACTGGTAGCAGTGATGAGAATGATTATGGAAGCAGAGGCTTGAGTGTTCAAGATGGAAGTGACAATGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAAGTTAGCAGCAGCCCTCATCCAGTTTCACCTCCTAATCAATCTCATGATGCTCCTGATAGCACGTGTGCCCAAGTGGTGCATACAAAGCCTGAAAACATTAGCAGTATGTGGGTCCATGCCACAGAAAAAGAGTTCCATGAACCAATTGATCATCTTGATGATATTGCAATGGGTAAAGATTTGGCTATGGGAATATCTTTGAACACGCAACAAAAGCATGCACTTGAGGAATTATCTAACAATCCAATGCGTAAAGGGGTTAATAAGATGTCTGATATAGATGGTATGCAGCACAATAAAGGACAGAGTAATCTCTGTGAAAAAGTACAACTGGAAGAGGACAGTGATAAAATTAGGATGCAGGAAAATCAGGGTACAAATTTTGGTGTTGCTGATAGCAGCAATCCACATGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCAAAAACAAAAGCAAGTTGTTGCTTCAAACAGCATCCATCACTTGAACTAACATTGGAAAGGATGGGAGAAGTAAAAGATGACGAACATGTCACAGGTGATGAATGTAATGTTTTGAGACATTCAAATCTATCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTGTTCCCCACTAGACAATAGCTCAGTTGCACCAATTACAGAGACAACACACAACTTCACATCTCATTCAAATGCCACCCCAAATCAGCAGTCTAATGGAAGCAACAACATTAATGACCTGACTTCCACTAATACATATCTTAGCACGAAACCCGAAAATTTTGACAAGAAACCCGAGTCTTCTGGAGGGATTGGCTCTTTTATTTCTTCTGAAGTCCAAACTGTGCAAAATAATAGTATTTCTGCACCTCAGAGGAAGACTTCTTCCCAGGATGAATATGCCGGAATCGTTAAAGGACAGGTGCGAGGTTCTGAACAAGGATTCCAAATTGAGCACACTCAGCATCAACTTCAACATTGTAATCACATTGCCGACAAGGCTGCAGTGGATCTCCAATCAGTTCATGATCTCTTACTGAAAAGCACGACCAAAGATGCTCAGCAATGTACATTATCAAATGCGTTTGGAGGGCCAGCAGAAAGTAATGGTACAAATTATGGTTTGAATGGAAGTGCAGCTGAGAGTGATCACGGGAGTAATGGACAGGAAGGAAGCAACACTTTGACAATCAGAATGATAAATGTGGAAAATCGTGATGTGACAGCTGGGAGCATTGGAGTTGGTGCAATTGAGAGAATAAACATTGGAAGTGGATCATATGAAGAACGAATTGCATTGAGGGAGGCTGCCTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGACAAAAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGATCAGCGGCCACGTGTTAGGGGACAATTTGTTAAACAAATAGTGTCTGATACCAAAGAAGAAGAAAATAAAGAAAGCGAGGAACTTGTATCTATGGATAATTCTAGCGATGTTCCACAACAATACCAATCAAAATGCTGA
Protein sequence

>Msa0602620

MNNNVGKQSLAEQNHALNDRKSLNNRVVNEGPGSESSTGNDTRFSKVTKDGNSGLKGSIRINERLQISQQPPPRNPVTYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSNDSGSESGTNTRKFAKSRSICAFDNNTGSSDENDYGSRGLSVQDGSDNGSGTQSSWTTNLAQVSSSPHPVSPPNQSHDAPDSTCAQVVHTKPENISSMWVHATEKEFHEPIDHLDDIAMGKDLAMGISLNTQQKHALEELSNNPMRKGVNKMSDIDGMQHNKGQSNLCEKVQLEEDSDKIRMQENQGTNFGVADSSNPHAESRDLNTSNGFSGFAKTKASCCFKQHPSLELTLERMGEVKDDEHVTGDECNVLRHSNLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPITETTHNFTSHSNATPNQQSNGSNNINDLTSTNTYLSTKPENFDKKPESSGGIGSFISSEVQTVQNNSISAPQRKTSSQDEYAGIVKGQVRGSEQGFQIEHTQHQLQHCNHIADKAAVDLQSVHDLLLKSTTKDAQQCTLSNAFGGPAESNGTNYGLNGSAAESDHGSNGQEGSNTLTIRMINVENRDVTAGSIGVGAIERINIGSGSYEERIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQIVSDTKEEENKESEELVSMDNSSDVPQQYQSKC*