AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0405250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405250 MtrunA17_Chr3g0122401 98.280 465 5 1 1 462 1 465 0.0 951
Msa0405250 MtrunA17_Chr1g0161871 46.950 377 165 10 102 461 18 376 3.27e-107 323
Msa0405250 MtrunA17_Chr1g0161891 48.370 368 167 11 97 461 2 349 4.34e-107 321
Msa0405250 MtrunA17_Chr7g0220421 30.939 362 224 15 88 436 68 416 3.26e-34 133
Msa0405250 MtrunA17_Chr1g0150561 25.515 388 240 13 115 460 21 401 1.63e-30 122
Msa0405250 MtrunA17_Chr4g0052791 25.707 389 238 12 108 460 55 428 1.27e-25 108
Msa0405250 MtrunA17_Chr8g0347881 26.146 371 230 14 117 458 45 400 4.68e-23 100
Msa0405250 MtrunA17_Chr4g0003651 25.707 389 230 19 112 460 1 370 1.48e-22 99.0
Msa0405250 MtrunA17_Chr8g0377451 50.909 110 31 5 354 462 1 88 1.98e-22 91.3
Msa0405250 MtrunA17_Chr8g0347851 24.932 369 234 13 116 458 44 395 8.57e-20 91.3
Msa0405250 MtrunA17_Chr1g0152611 23.204 362 227 12 108 437 28 370 3.65e-13 70.9
Msa0405250 MtrunA17_Chr2g0293971 22.264 265 179 9 116 358 9 268 6.70e-12 67.0
Msa0405250 MtrunA17_Chr3g0078391 24.111 253 159 8 116 336 47 298 9.41e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405250 AT1G27340.1 65.598 468 151 6 2 462 3 467 0.0 626
Msa0405250 AT5G15710.1 28.043 460 279 15 1 439 1 429 5.20e-33 130
Msa0405250 AT5G15710.2 28.043 460 279 15 1 439 1 429 5.20e-33 130
Msa0405250 AT1G30950.1 26.446 363 225 10 108 437 42 395 5.97e-31 124
Msa0405250 AT4G33160.1 23.059 425 260 13 96 462 42 457 9.96e-25 106
Msa0405250 AT4G33160.2 23.059 425 260 13 96 462 103 518 2.01e-24 106
Msa0405250 AT5G43190.1 25.833 360 224 13 103 437 38 379 7.42e-18 85.9
Msa0405250 AT3G61590.2 36.364 121 73 3 116 234 51 169 4.26e-17 83.6
Msa0405250 AT3G61590.3 36.364 121 73 3 116 234 51 169 4.26e-17 83.6
Msa0405250 AT3G61590.1 36.364 121 73 3 116 234 43 161 4.62e-17 83.6
Msa0405250 AT3G61590.4 36.667 120 72 3 117 234 80 197 6.09e-17 83.2

Find 157 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGGTTCCTTGCCATTTGC+AGG 0.216151 3_2:-39752224 Msa0405250:three_prime_UTR
TTATACCATATTTGTGCTTT+GGG 0.233825 3_2:-39751971 Msa0405250:three_prime_UTR
CCTATAATACCTTTGATAAA+AGG 0.259948 3_2:-39752049 Msa0405250:three_prime_UTR
TGCCATTTGCAGGTCTTATT+AGG 0.276391 3_2:-39752214 Msa0405250:three_prime_UTR
TTGTCCCCAAAGCACAAATA+TGG 0.278346 3_2:+39751966 None:intergenic
CGCACGGGCGATTGAGTATA+TGG 0.291268 3_2:-39759389 Msa0405250:five_prime_UTR
GATAGAAAGAGAAAGGAAAA+AGG 0.293836 3_2:-39759261 Msa0405250:five_prime_UTR
AAGTCCAAGCACCATATATT+TGG 0.306854 3_2:+39752505 None:intergenic
ATACTTCCAGGCATGTTTCC+TGG 0.307731 3_2:+39752811 None:intergenic
CTTATACCATATTTGTGCTT+TGG 0.320113 3_2:-39751972 Msa0405250:three_prime_UTR
TCATAGGAAACAACCCCTTC+TGG 0.328091 3_2:+39752712 None:intergenic
AAAGAATGGCTGAAGGTTCC+TGG 0.339162 3_2:-39752376 Msa0405250:CDS
AGGGGTTGTTTCCTATGATA+TGG 0.339167 3_2:-39752707 Msa0405250:CDS
ACCCATGAAAATGTGAATTC+AGG 0.349764 3_2:-39753153 Msa0405250:CDS
GTTTCCTATGATATGGCAAC+AGG 0.361646 3_2:-39752700 Msa0405250:CDS
TTATTATTAGTAGAGGAAAT+CGG 0.362073 3_2:-39759226 Msa0405250:five_prime_UTR
AAGTTATGGAACAAGAAATA+TGG 0.365064 3_2:-39753344 Msa0405250:CDS
TTCCATAACTTCACTTGTAC+TGG 0.365202 3_2:+39753356 None:intergenic
TATTATTAGTAGAGGAAATC+GGG 0.366134 3_2:-39759225 Msa0405250:five_prime_UTR
CCGTCAATGGAATTCCTTGC+TGG 0.368398 3_2:-39753241 Msa0405250:CDS
CACTGCCGTTTCTTCCCATT+CGG 0.369756 3_2:+39752343 None:intergenic
CCCCTGCTTCGATCTCTTCG+AGG 0.376451 3_2:+39753396 None:intergenic
TAGACAGAATGCCAAATATA+TGG 0.389573 3_2:-39752516 Msa0405250:CDS
TGCCATTGTCCCTTAACTTC+AGG 0.389987 3_2:-39752783 Msa0405250:CDS
ACAGCCTCAAATAAATCTTC+AGG 0.391468 3_2:+39753312 None:intergenic
ATGATATGGCAACAGGGGTT+TGG 0.394545 3_2:-39752693 Msa0405250:CDS
CCCACTAACTCAATCCTTCA+AGG 0.400080 3_2:-39752986 Msa0405250:CDS
CAGTTTGCGACCTGAAGTTA+AGG 0.407146 3_2:+39752773 None:intergenic
TTCTGTATTCAATAACTGAA+TGG 0.413628 3_2:-39752005 Msa0405250:three_prime_UTR
GCATTAGCGCATGGAAGGGC+TGG 0.416334 3_2:-39759193 Msa0405250:exon
CTAATCCCAGCGTTCCTCTC+TGG 0.418673 3_2:-39752180 Msa0405250:three_prime_UTR
CGAAGCAGGGGCAAATCATC+AGG 0.419820 3_2:-39753384 Msa0405250:CDS
AATGGCAGGTTCATACTTCC+AGG 0.420328 3_2:+39752799 None:intergenic
CAGAGAGGAACGCTGGGATT+AGG 0.423155 3_2:+39752181 None:intergenic
AATGGAAATTCAATCAGTTC+AGG 0.423765 3_2:-39752907 Msa0405250:CDS
ATCCAGTACAAGTGAAGTTA+TGG 0.433150 3_2:-39753358 Msa0405250:CDS
TCCTTGAAGGATTGAGTTAG+TGG 0.433327 3_2:+39752985 None:intergenic
CCGAGCTGGCAACTCCTTGA+AGG 0.435297 3_2:+39752972 None:intergenic
CAGCCACGTGTGTATGCATA+TGG 0.440067 3_2:-39752573 Msa0405250:CDS
ATCTGAACGCATGAAGTATA+GGG 0.440759 3_2:+39752735 None:intergenic
GTTCAGGCTACAAGATCCTA+TGG 0.440809 3_2:-39752891 Msa0405250:CDS
GATCTGAACGCATGAAGTAT+AGG 0.441700 3_2:+39752734 None:intergenic
AAAACAAAACTCCGTTTGCT+TGG 0.442190 3_2:-39759338 Msa0405250:five_prime_UTR
CGAGGCTTCTTAGCGGGTGG+AGG 0.447598 3_2:+39753414 None:intergenic
TTAGTTTGCTTTCTTGACAT+TGG 0.450160 3_2:-39753033 Msa0405250:CDS
GTCTGGTCTCGCGTTGCTGT+AGG 0.453658 3_2:-39752940 Msa0405250:CDS
CCTGGGTGTGTGGTGCCGAA+TGG 0.455358 3_2:-39752358 Msa0405250:CDS
TGGCAAAACAATCAACTTTG+TGG 0.460094 3_2:+39753074 None:intergenic
GATAGATAGTTCACTACTTA+CGG 0.461288 3_2:-39759367 Msa0405250:five_prime_UTR
AGGAAGATAGTTTGATGAGA+AGG 0.465365 3_2:+39759081 None:intergenic
GAGTAGAGATAGAAAGAGAA+AGG 0.465373 3_2:-39759268 Msa0405250:five_prime_UTR
CTGGGTGTGTGGTGCCGAAT+GGG 0.467430 3_2:-39752357 Msa0405250:CDS
GTTGCCAGCTCGGTCAGTTA+AGG 0.467547 3_2:-39752962 Msa0405250:CDS
TCAGTCAAATGTAGTGGCGC+TGG 0.471171 3_2:+39752655 None:intergenic
TCTGGTCTCGCGTTGCTGTA+GGG 0.474671 3_2:-39752939 Msa0405250:CDS
TCTCTTCGAGGCTTCTTAGC+GGG 0.476627 3_2:+39753408 None:intergenic
GGCAAAACAATCAACTTTGT+GGG 0.476939 3_2:+39753075 None:intergenic
TCCGCTCTGTATGCCGTCAA+TGG 0.480162 3_2:-39753254 Msa0405250:CDS
AACCCCTGTTGCCATATCAT+AGG 0.480445 3_2:+39752696 None:intergenic
TTGCCAGTGGCTTCTGCTGG+GGG 0.482095 3_2:-39753057 Msa0405250:CDS
TCCTTCAACATCACCCTCCC+AGG 0.487491 3_2:-39759062 Msa0405250:intron
ACTTTCCAGCTGCCATTACA+AGG 0.493916 3_2:+39753469 None:intergenic
TGAGATCGAAACAAATGAAT+CGG 0.494220 3_2:-39752423 Msa0405250:CDS
ACCTGGGAGGGTGATGTTGA+AGG 0.494361 3_2:+39759061 None:intergenic
AGTGGCAGGTCGTTGCTGTA+AGG 0.496763 3_2:+39752260 None:intergenic
TGAGCAAGCCTTTGTTCCCT+AGG 0.496907 3_2:+39752455 None:intergenic
AGCCTCGAAGAGATCGAAGC+AGG 0.497044 3_2:-39753398 Msa0405250:CDS
TGTGGCCTTGTAATGGCAGC+TGG 0.498116 3_2:-39753474 Msa0405250:CDS
GATGGTCAGATCATGCTTGT+GGG 0.503093 3_2:-39752613 Msa0405250:CDS
ACAACATAGCAAGGAAAGAA+TGG 0.504668 3_2:-39752390 Msa0405250:CDS
ACAATCAACTTTGTGGGCAG+TGG 0.506047 3_2:+39753081 None:intergenic
AGAAGGTTGCTGTTGAAGAA+TGG 0.508961 3_2:+39759098 None:intergenic
GACGGCATACAGAGCGGAAG+CGG 0.516102 3_2:+39753259 None:intergenic
ATCTCTTCGAGGCTTCTTAG+CGG 0.517356 3_2:+39753407 None:intergenic
TGAAGTTAAGGGACAATGGC+AGG 0.518383 3_2:+39752785 None:intergenic
ATCCTATGGGTGGGTTGTGA+TGG 0.519459 3_2:-39752877 Msa0405250:CDS
TTTCAAAGAAGGGTCATACA+TGG 0.524726 3_2:+39753128 None:intergenic
CACGTCAGAATGACTTGCCT+AGG 0.525727 3_2:-39752472 Msa0405250:CDS
TTTGCCAGTGGCTTCTGCTG+GGG 0.528979 3_2:-39753058 Msa0405250:CDS
CAGCTCGGTCAGTTAAGGTC+TGG 0.530478 3_2:-39752957 Msa0405250:CDS
CCTTCAAGGAGTTGCCAGCT+CGG 0.530770 3_2:-39752972 Msa0405250:CDS
GCCATGCTGAAGCAGCTCAT+CGG 0.531549 3_2:-39759171 Msa0405250:CDS
AATGCCAAATATATGGTGCT+TGG 0.531763 3_2:-39752509 Msa0405250:CDS
AAACCACGTTTCCAAGCAAA+CGG 0.536760 3_2:+39759327 None:intergenic
ACTCCGTTTGCTTGGAAACG+TGG 0.538355 3_2:-39759330 Msa0405250:five_prime_UTR
AGTTTGCGACCTGAAGTTAA+GGG 0.541286 3_2:+39752774 None:intergenic
CAAGCCACCGCGGTCAAGCA+TGG 0.544564 3_2:+39752295 None:intergenic
GCCTCGAAGAGATCGAAGCA+GGG 0.544882 3_2:-39753397 Msa0405250:CDS
AGTCGTCCAGGAAACATGCC+TGG 0.549750 3_2:-39752817 Msa0405250:CDS
ACCGATGAGCTGCTTCAGCA+TGG 0.550406 3_2:+39759170 None:intergenic
CAGTCAAATGTAGTGGCGCT+GGG 0.551715 3_2:+39752656 None:intergenic
AGAGCTATCTTCGAGGTCAA+AGG 0.555308 3_2:+39753509 None:intergenic
CCAGCAAGGAATTCCATTGA+CGG 0.555971 3_2:+39753241 None:intergenic
CATCTACAGAGCTATCTTCG+AGG 0.556179 3_2:+39753502 None:intergenic
TTAGCGGGTGGAGGCTTCAG+AGG 0.556937 3_2:+39753423 None:intergenic
AAGAATGGCTGAAGGTTCCT+GGG 0.558151 3_2:-39752375 Msa0405250:CDS
CTTCGAGGCTTCTTAGCGGG+TGG 0.561487 3_2:+39753411 None:intergenic
CACCTAATAAGACCTGCAAA+TGG 0.562987 3_2:+39752212 None:intergenic
ATCGAAACAAATGAATCGGT+TGG 0.564495 3_2:-39752419 Msa0405250:CDS
CCTTGAAGGATTGAGTTAGT+GGG 0.570394 3_2:+39752986 None:intergenic
CACACTCTAGCTGAGTATGA+TGG 0.574409 3_2:-39752631 Msa0405250:CDS
GTTAAACCAGAGAGGAACGC+TGG 0.574971 3_2:+39752174 None:intergenic
GTGTGTGTTATTATTAGTAG+AGG 0.577401 3_2:-39759233 Msa0405250:five_prime_UTR
TGACTGTTGTGGCCTTGTAA+TGG 0.580674 3_2:-39753481 Msa0405250:CDS
TGGGTTATGGTGTAAAACCA+TGG 0.586647 3_2:+39753171 None:intergenic
GCTGTAGGGATGACAGTGAA+TGG 0.589049 3_2:-39752925 Msa0405250:CDS
TGGTGCCGAATGGGAAGAAA+CGG 0.591767 3_2:-39752348 Msa0405250:CDS
AAAGGTATTATAGGATAGCA+AGG 0.591838 3_2:+39752058 None:intergenic
TGCAGAGAATGACACTCTTG+TGG 0.591979 3_2:-39752546 Msa0405250:CDS
AAGTCCCGCAAGAAAATCCA+TGG 0.594704 3_2:-39753188 Msa0405250:CDS
TATACCATATTTGTGCTTTG+GGG 0.597702 3_2:-39751970 Msa0405250:three_prime_UTR
ATTATTAGTAGAGGAAATCG+GGG 0.597850 3_2:-39759224 Msa0405250:five_prime_UTR
TCATCCATGCTTGACCGCGG+TGG 0.597901 3_2:-39752299 Msa0405250:CDS
GGTCGTTGCTGTAAGGTACA+AGG 0.600597 3_2:+39752267 None:intergenic
GCTGAAGGTTCCTGGGTGTG+TGG 0.600893 3_2:-39752368 Msa0405250:CDS
TCATGCGTTCAGATCCAGAA+GGG 0.601959 3_2:-39752726 Msa0405250:CDS
TGGTTACTTACAACATAGCA+AGG 0.602101 3_2:-39752399 Msa0405250:CDS
GAGAATGACACTCTTGTGGA+AGG 0.607066 3_2:-39752542 Msa0405250:CDS
ATGACTTGCCTAGGGAACAA+AGG 0.609468 3_2:-39752463 Msa0405250:CDS
GGCTACAAGATCCTATGGGT+GGG 0.610734 3_2:-39752886 Msa0405250:CDS
AGGCTACAAGATCCTATGGG+TGG 0.612217 3_2:-39752887 Msa0405250:CDS
AAAGCTTTGAGAAGCCAGCA+AGG 0.612786 3_2:+39753227 None:intergenic
TGATGGTCAGATCATGCTTG+TGG 0.614839 3_2:-39752614 Msa0405250:CDS
TTCCTATGATATGGCAACAG+GGG 0.616895 3_2:-39752698 Msa0405250:CDS
TTATTAGTAGAGGAAATCGG+GGG 0.619979 3_2:-39759223 Msa0405250:five_prime_UTR
GAGGGAAAACTAACCTGGGA+GGG 0.621021 3_2:+39759049 None:intergenic
GTGTGGTCAGTCAAATGTAG+TGG 0.622699 3_2:+39752649 None:intergenic
TTAAACCAGAGAGGAACGCT+GGG 0.625011 3_2:+39752175 None:intergenic
CTCCATCACAACCCACCCAT+AGG 0.626354 3_2:+39752875 None:intergenic
CAGACCTTAACTGACCGAGC+TGG 0.631524 3_2:+39752958 None:intergenic
AGAATATGAAGTTTATGACT+CGG 0.638363 3_2:-39752854 Msa0405250:CDS
AATAAGACCTGCAAATGGCA+AGG 0.642534 3_2:+39752217 None:intergenic
TTTCCTATGATATGGCAACA+GGG 0.643758 3_2:-39752699 Msa0405250:CDS
ACGTCAGAATGACTTGCCTA+GGG 0.644663 3_2:-39752471 Msa0405250:CDS
AATGACACTCTTGTGGAAGG+AGG 0.644741 3_2:-39752539 Msa0405250:CDS
TTCAGGCTACAAGATCCTAT+GGG 0.648233 3_2:-39752890 Msa0405250:CDS
AGCAAGGAAAGAATGGCTGA+AGG 0.648548 3_2:-39752383 Msa0405250:CDS
CCATTCGGCACCACACACCC+AGG 0.649604 3_2:+39752358 None:intergenic
ATTTCATCCATGCTTGACCG+CGG 0.649663 3_2:-39752302 Msa0405250:CDS
CGAATGGGAAGAAACGGCAG+TGG 0.651054 3_2:-39752342 Msa0405250:CDS
GTGGGCAGTGGTGATATAGA+CGG 0.653208 3_2:+39753093 None:intergenic
TTCATGCGTTCAGATCCAGA+AGG 0.658440 3_2:-39752727 Msa0405250:CDS
AGCCACGTGTGTATGCATAT+GGG 0.660040 3_2:-39752572 Msa0405250:CDS
GCTATCTTCGAGGTCAAAGG+AGG 0.661871 3_2:+39753512 None:intergenic
TTTACTCTGTTAAACCAGAG+AGG 0.662771 3_2:+39752166 None:intergenic
CCTCGAAGAGATCGAAGCAG+GGG 0.663964 3_2:-39753396 Msa0405250:CDS
CTCCCATATGCATACACACG+TGG 0.665284 3_2:+39752570 None:intergenic
TACATACATAGAAGTTACGA+TGG 0.667085 3_2:+39753010 None:intergenic
AGCTCTGTAGATGACTGTTG+TGG 0.670937 3_2:-39753492 Msa0405250:CDS
CATGCGTTCAGATCCAGAAG+GGG 0.671936 3_2:-39752725 Msa0405250:CDS
GACCTGAAGTTAAGGGACAA+TGG 0.674409 3_2:+39752781 None:intergenic
TCCATTGACGGCATACAGAG+CGG 0.675929 3_2:+39753253 None:intergenic
CATCATACTCAGCTAGAGTG+TGG 0.675947 3_2:+39752632 None:intergenic
AAACGGCAGTGGATAGCATG+TGG 0.678505 3_2:-39752331 Msa0405250:CDS
TATTAGTAGAGGAAATCGGG+GGG 0.696893 3_2:-39759222 Msa0405250:five_prime_UTR
AGAGGGAAAACTAACCTGGG+AGG 0.703983 3_2:+39759048 None:intergenic
CAAGGAAAATCAAGCCACCG+CGG 0.733913 3_2:+39752285 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAAAAAAAATTAGTTTTTA+AGG + chr3_2:39752586-39752605 None:intergenic 10.0%
!!! AAAATAATATTTTACTAGTT+TGG - chr3_2:39753962-39753981 Msa0405250:intron 10.0%
!!! GGTTAAATTTAAAATAATAA+AGG + chr3_2:39754552-39754571 None:intergenic 10.0%
!! AACATCAAAAATATAAAATT+GGG + chr3_2:39755893-39755912 None:intergenic 10.0%
!! AACTTAATTAATTTAAAAGA+TGG + chr3_2:39757432-39757451 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755868-39755887 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755868-39755887 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755868-39755887 None:intergenic 100.0%
!! NNNNNNNNNGGTTATATGAA+CGG - chr3_2:39752531-39752550 Msa0405250:CDS 15.0%
!! TTGTTTAATTGATATTAACA+CGG + chr3_2:39752815-39752834 None:intergenic 15.0%
!! AAAGTAAATAACATGAAATA+AGG - chr3_2:39752902-39752921 Msa0405250:CDS 15.0%
!! TTTATTTGAACAATTCAATT+AGG - chr3_2:39753190-39753209 Msa0405250:CDS 15.0%
!! TAATGTAAAATCATGATATT+TGG + chr3_2:39753680-39753699 None:intergenic 15.0%
!!! ATTTTGTCAAAAAAAAAAGT+TGG + chr3_2:39754573-39754592 None:intergenic 15.0%
!! ATTACATCATTATGTATATT+TGG + chr3_2:39755159-39755178 None:intergenic 15.0%
!!! TACATAATGATGTAATATTT+TGG - chr3_2:39755163-39755182 Msa0405250:intron 15.0%
!!! GTTTCAATTACTTTTTATTA+CGG + chr3_2:39755423-39755442 None:intergenic 15.0%
!! ACATCAAAAATATAAAATTG+GGG + chr3_2:39755892-39755911 None:intergenic 15.0%
!! GAACATCAAAAATATAAAAT+TGG + chr3_2:39755894-39755913 None:intergenic 15.0%
!!! ACATAATTTTACATAAAATC+AGG - chr3_2:39755980-39755999 Msa0405250:intron 15.0%
!!! CATAATTTTACATAAAATCA+GGG - chr3_2:39755981-39756000 Msa0405250:intron 15.0%
!! AAAAATCTTTATAATGCAAA+CGG - chr3_2:39756440-39756459 Msa0405250:intron 15.0%
!! TTATTTCAAAAAGAAGTAAA+TGG + chr3_2:39756941-39756960 None:intergenic 15.0%
!!! AAACTAATGTTGATTTTTTA+AGG - chr3_2:39757228-39757247 Msa0405250:intron 15.0%
!!! AACTAATGTTGATTTTTTAA+GGG - chr3_2:39757229-39757248 Msa0405250:intron 15.0%
!! AAGTTATATAATTACACATA+CGG - chr3_2:39757447-39757466 Msa0405250:intron 15.0%
!! AATGGATAAACAAAAATATT+TGG + chr3_2:39757780-39757799 None:intergenic 15.0%
!! AGAGTAAATGAAAAATAATT+TGG - chr3_2:39759172-39759191 Msa0405250:CDS 15.0%
!! GAGTAAATGAAAAATAATTT+GGG - chr3_2:39759173-39759192 Msa0405250:CDS 15.0%
!! TTATTATTAGTAGAGGAAAT+CGG - chr3_2:39752097-39752116 Msa0405250:three_prime_UTR 20.0%
!! AAACTTAGAGATTATATGAA+CGG - chr3_2:39752720-39752739 Msa0405250:CDS 20.0%
!! AAATAATATTAGATCACCTA+AGG + chr3_2:39753105-39753124 None:intergenic 20.0%
!! AATCGTTTATTTGTGATATT+AGG + chr3_2:39753148-39753167 None:intergenic 20.0%
!! TTGAATTGTTCAAATAAACA+GGG + chr3_2:39753188-39753207 None:intergenic 20.0%
!! ATTGAATTGTTCAAATAAAC+AGG + chr3_2:39753189-39753208 None:intergenic 20.0%
!!! TAATAGATTAGTTTAGCTTT+AGG - chr3_2:39753871-39753890 Msa0405250:intron 20.0%
!!! ATGTTTAAGCCTTAAAATTT+TGG - chr3_2:39754120-39754139 Msa0405250:intron 20.0%
!!! ATTTCTACACTTTTGTTATT+TGG - chr3_2:39754591-39754610 Msa0405250:intron 20.0%
!! AATTAGAAAAAGAAAGAAGA+TGG + chr3_2:39754781-39754800 None:intergenic 20.0%
!! TATAAAATATAGGTTAGTAG+TGG + chr3_2:39754855-39754874 None:intergenic 20.0%
!! CACAATATGGTATAAAATAT+AGG + chr3_2:39754865-39754884 None:intergenic 20.0%
!!! TAATATTTTGGATGATGATT+TGG - chr3_2:39755175-39755194 Msa0405250:intron 20.0%
!!! GGAATAAAGTTTTTTTGTTT+GGG + chr3_2:39755402-39755421 None:intergenic 20.0%
!! ATCAAAAATATAAAATTGGG+GGG + chr3_2:39755890-39755909 None:intergenic 20.0%
!! CATCAAAAATATAAAATTGG+GGG + chr3_2:39755891-39755910 None:intergenic 20.0%
!! ACAAACAAAAAACACAATTA+CGG + chr3_2:39756206-39756225 None:intergenic 20.0%
!!! ATCGATTTTAAAACCTTATT+TGG - chr3_2:39756478-39756497 Msa0405250:intron 20.0%
!!! GAAACTTTTAGTGAATTTTT+AGG - chr3_2:39756754-39756773 Msa0405250:intron 20.0%
!! TTGATTAAAATTGAGTTTGA+AGG - chr3_2:39757060-39757079 Msa0405250:intron 20.0%
!! TGATTAAAATTGAGTTTGAA+GGG - chr3_2:39757061-39757080 Msa0405250:intron 20.0%
!! TTCTAATCAAATTGAGATTT+GGG - chr3_2:39757201-39757220 Msa0405250:intron 20.0%
!!! CATTTTGAAAATGTCTATTT+TGG - chr3_2:39757313-39757332 Msa0405250:intron 20.0%
!!! TTTATATCACCTTTTATCAA+AGG + chr3_2:39759286-39759305 None:intergenic 20.0%
! TATTATTAGTAGAGGAAATC+GGG - chr3_2:39752098-39752117 Msa0405250:three_prime_UTR 25.0%
! TGAAGAAAATGTAAGAAAAG+AGG - chr3_2:39752604-39752623 Msa0405250:CDS 25.0%
!! AAATAGCCTCTTTTTATGAA+AGG + chr3_2:39752697-39752716 None:intergenic 25.0%
!! TTCATAAAAAGAGGCTATTT+TGG - chr3_2:39752697-39752716 Msa0405250:CDS 25.0%
! AAACAATAGCGTTATGAAAT+AGG - chr3_2:39752829-39752848 Msa0405250:CDS 25.0%
! ATTACAATCTCTAATTCCTT+AGG - chr3_2:39753086-39753105 Msa0405250:CDS 25.0%
! GGTGATCTAATATTATTTGA+AGG - chr3_2:39753107-39753126 Msa0405250:CDS 25.0%
! AGCTAAATCTCTTTCAAATT+AGG + chr3_2:39753392-39753411 None:intergenic 25.0%
! AATAACTTTCCTCATGATTT+GGG - chr3_2:39753520-39753539 Msa0405250:CDS 25.0%
! AAGCTAAACTAATCTATTAG+CGG + chr3_2:39753870-39753889 None:intergenic 25.0%
!! CATCTTCATCCAAAATTTTA+AGG + chr3_2:39754132-39754151 None:intergenic 25.0%
! CTAATATCTTAAGACTTTGA+GGG - chr3_2:39754345-39754364 Msa0405250:intron 25.0%
! TAATATCTTAAGACTTTGAG+GGG - chr3_2:39754346-39754365 Msa0405250:intron 25.0%
! AACAATATAGTCAAAACTGT+GGG + chr3_2:39754989-39755008 None:intergenic 25.0%
! AAACAATATAGTCAAAACTG+TGG + chr3_2:39754990-39755009 None:intergenic 25.0%
! AAAGATAATAGTAATCGTGA+AGG + chr3_2:39755296-39755315 None:intergenic 25.0%
!!! CGGAATAAAGTTTTTTTGTT+TGG + chr3_2:39755403-39755422 None:intergenic 25.0%
!! TTAGGAATTGTTGCATTTTA+GGG + chr3_2:39755789-39755808 None:intergenic 25.0%
!! ATTAGGAATTGTTGCATTTT+AGG + chr3_2:39755790-39755809 None:intergenic 25.0%
! TCAAAAATATAAAATTGGGG+GGG + chr3_2:39755889-39755908 None:intergenic 25.0%
!!! CATTGTTGCTTATTTTCTAT+TGG - chr3_2:39755918-39755937 Msa0405250:intron 25.0%
! TTACATAAAATCAGGGAAAA+TGG - chr3_2:39755988-39756007 Msa0405250:intron 25.0%
!!! TTTTAGAGAGAACTAGTATA+CGG - chr3_2:39756076-39756095 Msa0405250:intron 25.0%
!! ACTTAAAAGCATGCTATTTA+TGG + chr3_2:39756134-39756153 None:intergenic 25.0%
! TTTGAATTGAGTATCATTTG+CGG - chr3_2:39756225-39756244 Msa0405250:intron 25.0%
!! TTTAACATTTTTGCATTCCT+AGG - chr3_2:39756318-39756337 Msa0405250:intron 25.0%
!! TTAACATTTTTGCATTCCTA+GGG - chr3_2:39756319-39756338 Msa0405250:intron 25.0%
! TTTCGTTCTGTTTGATTATT+TGG - chr3_2:39756537-39756556 Msa0405250:intron 25.0%
!!! TTGTTTTGGTTGACATTTTT+CGG - chr3_2:39756610-39756629 Msa0405250:intron 25.0%
! AAAAATTGCATTAACAACCT+TGG + chr3_2:39757120-39757139 None:intergenic 25.0%
!!! AAAACCACTTTTGTATTAGA+CGG + chr3_2:39757143-39757162 None:intergenic 25.0%
! CTTCTAATCAAATTGAGATT+TGG - chr3_2:39757200-39757219 Msa0405250:intron 25.0%
! TCTAATCAAATTGAGATTTG+GGG - chr3_2:39757202-39757221 Msa0405250:intron 25.0%
! CATGAAATTATAGTGCATAA+AGG - chr3_2:39757289-39757308 Msa0405250:intron 25.0%
! AAGTAGATTAATCTAGTGTA+TGG - chr3_2:39757402-39757421 Msa0405250:intron 25.0%
! TAGAAAAACCAACATTTACA+GGG + chr3_2:39757738-39757757 None:intergenic 25.0%
! AAGTTATGGAACAAGAAATA+TGG - chr3_2:39757979-39757998 Msa0405250:intron 25.0%
!! TTTTCCTGAAGATTTATTTG+AGG - chr3_2:39758007-39758026 Msa0405250:intron 25.0%
! AGAATATGAAGTTTATGACT+CGG - chr3_2:39758469-39758488 Msa0405250:intron 25.0%
!! TGAAAAATAATTTGGGTTTG+TGG - chr3_2:39759180-39759199 Msa0405250:CDS 25.0%
!!! CCTTTTATCAAAGGTATTAT+AGG + chr3_2:39759277-39759296 None:intergenic 25.0%
! CCTATAATACCTTTGATAAA+AGG - chr3_2:39759274-39759293 Msa0405250:five_prime_UTR 25.0%
! TTCTGTATTCAATAACTGAA+TGG - chr3_2:39759318-39759337 Msa0405250:five_prime_UTR 25.0%
! TTATACCATATTTGTGCTTT+GGG - chr3_2:39759352-39759371 Msa0405250:five_prime_UTR 25.0%
GATAGATAGTTCACTACTTA+CGG - chr3_2:39751956-39751975 Msa0405250:three_prime_UTR 30.0%
GATAGAAAGAGAAAGGAAAA+AGG - chr3_2:39752062-39752081 Msa0405250:three_prime_UTR 30.0%
! GTGTGTGTTATTATTAGTAG+AGG - chr3_2:39752090-39752109 Msa0405250:three_prime_UTR 30.0%
ATTATTAGTAGAGGAAATCG+GGG - chr3_2:39752099-39752118 Msa0405250:three_prime_UTR 30.0%
AAATGATTCACCAAAACTAG+AGG + chr3_2:39752381-39752400 None:intergenic 30.0%
!!! TAGTTTTTAAGGAGTGTTTG+TGG + chr3_2:39752575-39752594 None:intergenic 30.0%
!!! AAAATTTATTTTAGTGCCCG+AGG - chr3_2:39752858-39752877 Msa0405250:CDS 30.0%
GAGAAATATTCATGAGAACT+AGG + chr3_2:39753002-39753021 None:intergenic 30.0%
!!! ATATTTCTCTAGTTTTGCGA+TGG - chr3_2:39753013-39753032 Msa0405250:CDS 30.0%
! AAACAGGGTTAGTATATGAA+TGG + chr3_2:39753173-39753192 None:intergenic 30.0%
GAATAACTTTCCTCATGATT+TGG - chr3_2:39753519-39753538 Msa0405250:CDS 30.0%
AATTCTATTCCCAAATCATG+AGG + chr3_2:39753532-39753551 None:intergenic 30.0%
ACAAAGAATGAAGATTCAAG+AGG + chr3_2:39753580-39753599 None:intergenic 30.0%
AGCTAAACTAATCTATTAGC+GGG + chr3_2:39753869-39753888 None:intergenic 30.0%
! AAATTTTGGATGAAGATGTG+AGG - chr3_2:39754134-39754153 Msa0405250:intron 30.0%
CCTCAAAGTCTTAAGATATT+AGG + chr3_2:39754347-39754366 None:intergenic 30.0%
CCTAATATCTTAAGACTTTG+AGG - chr3_2:39754344-39754363 Msa0405250:intron 30.0%
AATGTGATATCAATCTCAGT+TGG - chr3_2:39754370-39754389 Msa0405250:intron 30.0%
ATGTGATATCAATCTCAGTT+GGG - chr3_2:39754371-39754390 Msa0405250:intron 30.0%
CAAACAAACCATCATAATGT+TGG + chr3_2:39754453-39754472 None:intergenic 30.0%
!!! TCTACACTTTTGTTATTTGG+TGG - chr3_2:39754594-39754613 Msa0405250:intron 30.0%
!!! CTACACTTTTGTTATTTGGT+GGG - chr3_2:39754595-39754614 Msa0405250:intron 30.0%
!!! TTTTTTCGACTCACCTTATT+TGG - chr3_2:39755007-39755026 Msa0405250:intron 30.0%
AAAAATATAAAATTGGGGGG+GGG + chr3_2:39755887-39755906 None:intergenic 30.0%
CAAAAATATAAAATTGGGGG+GGG + chr3_2:39755888-39755907 None:intergenic 30.0%
AAAATCAGGGAAAATGGAAT+TGG - chr3_2:39755994-39756013 Msa0405250:intron 30.0%
GCTTAACGACAAGAAAAAAA+AGG + chr3_2:39756102-39756121 None:intergenic 30.0%
TGAAATATTACCGCCAAATA+CGG - chr3_2:39756171-39756190 Msa0405250:intron 30.0%
TTCGGTAAAGATCAATTTAC+TGG - chr3_2:39756628-39756647 Msa0405250:intron 30.0%
!!! ATTATCCTCCTTTTTTAAGG+AGG + chr3_2:39756804-39756823 None:intergenic 30.0%
!!! GCAATTATCCTCCTTTTTTA+AGG + chr3_2:39756807-39756826 None:intergenic 30.0%
ACATTGAACATGTATATCGT+GGG - chr3_2:39756994-39757013 Msa0405250:intron 30.0%
AAGGGAAGTGATTTAAATCT+AGG - chr3_2:39757079-39757098 Msa0405250:intron 30.0%
! TTTTCCGTCTAATACAAAAG+TGG - chr3_2:39757136-39757155 Msa0405250:intron 30.0%
CTAATCAAATTGAGATTTGG+GGG - chr3_2:39757203-39757222 Msa0405250:intron 30.0%
AACCAAACATGCTACAAATA+TGG - chr3_2:39757263-39757282 Msa0405250:intron 30.0%
TACCATATTTGTAGCATGTT+TGG + chr3_2:39757268-39757287 None:intergenic 30.0%
! TCTCTAATCTGATTTGACAA+AGG + chr3_2:39757350-39757369 None:intergenic 30.0%
AAATCAGATTAGAGAGTTGA+TGG - chr3_2:39757355-39757374 Msa0405250:intron 30.0%
! AATCAGATTAGAGAGTTGAT+GGG - chr3_2:39757356-39757375 Msa0405250:intron 30.0%
AAGACATCAAAGTAAATGTC+AGG + chr3_2:39757558-39757577 None:intergenic 30.0%
GATCAGGATAATTTATACCT+AGG + chr3_2:39757600-39757619 None:intergenic 30.0%
TATAAATTATCCTGATCGCA+TGG - chr3_2:39757603-39757622 Msa0405250:intron 30.0%
ATAAATTATCCTGATCGCAT+GGG - chr3_2:39757604-39757623 Msa0405250:intron 30.0%
GTAGAAAAACCAACATTTAC+AGG + chr3_2:39757739-39757758 None:intergenic 30.0%
!! TTGGTTTTTCTACTTGACAT+GGG - chr3_2:39757746-39757765 Msa0405250:intron 30.0%
! TTGTTTATCCATTTTGCAGA+TGG - chr3_2:39757787-39757806 Msa0405250:intron 30.0%
! TAAAACCATGGATTTTCTTG+CGG + chr3_2:39758143-39758162 None:intergenic 30.0%
!! ATTCACATTTTCATGGGTTA+TGG + chr3_2:39758168-39758187 None:intergenic 30.0%
! TCCTGAATTCACATTTTCAT+GGG + chr3_2:39758174-39758193 None:intergenic 30.0%
!! TTAGTTTGCTTTCTTGACAT+TGG - chr3_2:39758290-39758309 Msa0405250:intron 30.0%
TACATACATAGAAGTTACGA+TGG + chr3_2:39758316-39758335 None:intergenic 30.0%
AATGGAAATTCAATCAGTTC+AGG - chr3_2:39758416-39758435 Msa0405250:intron 30.0%
TAGACAGAATGCCAAATATA+TGG - chr3_2:39758807-39758826 Msa0405250:intron 30.0%
TGAGATCGAAACAAATGAAT+CGG - chr3_2:39758900-39758919 Msa0405250:intron 30.0%
!! AAAGGTATTATAGGATAGCA+AGG + chr3_2:39759268-39759287 None:intergenic 30.0%
CTTATACCATATTTGTGCTT+TGG - chr3_2:39759351-39759370 Msa0405250:five_prime_UTR 30.0%
TATACCATATTTGTGCTTTG+GGG - chr3_2:39759353-39759372 Msa0405250:five_prime_UTR 30.0%
AAAACAAAACTCCGTTTGCT+TGG - chr3_2:39751985-39752004 Msa0405250:three_prime_UTR 35.0%
GAGTAGAGATAGAAAGAGAA+AGG - chr3_2:39752055-39752074 Msa0405250:three_prime_UTR 35.0%
TTATTAGTAGAGGAAATCGG+GGG - chr3_2:39752100-39752119 Msa0405250:three_prime_UTR 35.0%
AGGAAGATAGTTTGATGAGA+AGG + chr3_2:39752245-39752264 None:intergenic 35.0%
AAAGAGAGAAAGAGAAGAGA+GGG + chr3_2:39752295-39752314 None:intergenic 35.0%
AAAAGAGAGAAAGAGAAGAG+AGG + chr3_2:39752296-39752315 None:intergenic 35.0%
! ATTTTTCCTTTTGCATCGCA+CGG - chr3_2:39752350-39752369 Msa0405250:CDS 35.0%
CGTTGACCTTTCATAAAAAG+AGG - chr3_2:39752688-39752707 Msa0405250:CDS 35.0%
GTAAGTCAAGGGATTGATTA+GGG + chr3_2:39753052-39753071 None:intergenic 35.0%
GAGATTGTAATCTCAGAAGA+GGG + chr3_2:39753077-39753096 None:intergenic 35.0%
AGAGATTGTAATCTCAGAAG+AGG + chr3_2:39753078-39753097 None:intergenic 35.0%
! TAGGTCTAAGTTGAAAGCTA+TGG - chr3_2:39753209-39753228 Msa0405250:CDS 35.0%
AATAGAGTTTCACAGCAACA+TGG - chr3_2:39753334-39753353 Msa0405250:CDS 35.0%
ACAGCAACATGGTTCAATTA+GGG - chr3_2:39753345-39753364 Msa0405250:CDS 35.0%
GAAAGAGATTTAGCTACACA+TGG - chr3_2:39753397-39753416 Msa0405250:CDS 35.0%
AAACATACCCTAGAAAATCC+AGG - chr3_2:39753447-39753466 Msa0405250:CDS 35.0%
! ATCTTCTCCTGGATTTTCTA+GGG + chr3_2:39753457-39753476 None:intergenic 35.0%
! TATCTTCTCCTGGATTTTCT+AGG + chr3_2:39753458-39753477 None:intergenic 35.0%
AAAGTTATTCCCAAGTCATG+AGG + chr3_2:39753509-39753528 None:intergenic 35.0%
TCAAAAGACTTACAAATGGG+AGG + chr3_2:39753555-39753574 None:intergenic 35.0%
! TCCCATTTGTAAGTCTTTTG+AGG - chr3_2:39753554-39753573 Msa0405250:intron 35.0%
GCCTCAAAAGACTTACAAAT+GGG + chr3_2:39753558-39753577 None:intergenic 35.0%
CTTCATTCTTTGTCTTTCCA+AGG - chr3_2:39753587-39753606 Msa0405250:intron 35.0%
AACATGTCATCAACAGTCAA+TGG - chr3_2:39753716-39753735 Msa0405250:intron 35.0%
ACATGTCATCAACAGTCAAT+GGG - chr3_2:39753717-39753736 Msa0405250:intron 35.0%
GCTAAACTAATCTATTAGCG+GGG + chr3_2:39753868-39753887 None:intergenic 35.0%
GTTTCGTCTTTAATTGACAC+TGG + chr3_2:39754051-39754070 None:intergenic 35.0%
ATATCCCGATTCAACATTGT+GGG - chr3_2:39754239-39754258 Msa0405250:intron 35.0%
CATAATGTTGGAACTTTCGT+GGG + chr3_2:39754441-39754460 None:intergenic 35.0%
TCATAATGTTGGAACTTTCG+TGG + chr3_2:39754442-39754461 None:intergenic 35.0%
CGAAAGTTCCAACATTATGA+TGG - chr3_2:39754442-39754461 Msa0405250:intron 35.0%
GAGCAAGAGAGAAATGATAA+GGG + chr3_2:39754747-39754766 None:intergenic 35.0%
TGAGCAAGAGAGAAATGATA+AGG + chr3_2:39754748-39754767 None:intergenic 35.0%
ATAAGGCTAGAGACACAATA+TGG + chr3_2:39754878-39754897 None:intergenic 35.0%
TCTGGTGAGATAGGTATATA+AGG + chr3_2:39754895-39754914 None:intergenic 35.0%
GACTTTATGTGTCTATGATC+TGG + chr3_2:39754913-39754932 None:intergenic 35.0%
!! GTTGATGGTAGTTTCATACA+TGG + chr3_2:39754967-39754986 None:intergenic 35.0%
TATGGTGACATAGCCAAATA+AGG + chr3_2:39755023-39755042 None:intergenic 35.0%
TCCACATTCTATCCAAGAAT+AGG - chr3_2:39755107-39755126 Msa0405250:intron 35.0%
ACCTATTCTTGGATAGAATG+TGG + chr3_2:39755111-39755130 None:intergenic 35.0%
TATTTCTCGACACCTATTCT+TGG + chr3_2:39755122-39755141 None:intergenic 35.0%
! ATCACTCATTAGCCTACAAT+GGG + chr3_2:39755248-39755267 None:intergenic 35.0%
ATCAACTAATCATCACAGGT+TGG + chr3_2:39755271-39755290 None:intergenic 35.0%
GGTAATCAACTAATCATCAC+AGG + chr3_2:39755275-39755294 None:intergenic 35.0%
GCGTGAAACTTACAGAAATT+AGG + chr3_2:39755807-39755826 None:intergenic 35.0%
AAAATATAAAATTGGGGGGG+GGG + chr3_2:39755886-39755905 None:intergenic 35.0%
CATCTTTGCAACCACAATTA+CGG + chr3_2:39756406-39756425 None:intergenic 35.0%
!!! GTATCCTGCTTGTTTTGTTT+TGG - chr3_2:39756596-39756615 Msa0405250:intron 35.0%
TCAACCAAAACAAAACAAGC+AGG + chr3_2:39756603-39756622 None:intergenic 35.0%
AAAAAAGGAGGATAATTGCG+TGG - chr3_2:39756808-39756827 Msa0405250:intron 35.0%
TACATTCTAACCATTCGTTC+AGG - chr3_2:39756842-39756861 Msa0405250:intron 35.0%
CACATTGAACATGTATATCG+TGG - chr3_2:39756993-39757012 Msa0405250:intron 35.0%
!!! AAATGTCTATTTTGGCACCT+AGG - chr3_2:39757321-39757340 Msa0405250:intron 35.0%
!!! AATGTCTATTTTGGCACCTA+GGG - chr3_2:39757322-39757341 Msa0405250:intron 35.0%
!! ATCAGATTAGAGAGTTGATG+GGG - chr3_2:39757357-39757376 Msa0405250:intron 35.0%
AGGATTCACAACAGATAGAA+AGG + chr3_2:39757707-39757726 None:intergenic 35.0%
!!! GTTGGTTTTTCTACTTGACA+TGG - chr3_2:39757745-39757764 Msa0405250:intron 35.0%
! TGGTTTTTCTACTTGACATG+GGG - chr3_2:39757747-39757766 Msa0405250:intron 35.0%
! CTGGAAAGTCTCATAGTTTT+AGG - chr3_2:39757868-39757887 Msa0405250:intron 35.0%
ATCCAGTACAAGTGAAGTTA+TGG - chr3_2:39757965-39757984 Msa0405250:intron 35.0%
TTCCATAACTTCACTTGTAC+TGG + chr3_2:39757970-39757989 None:intergenic 35.0%
ACAGCCTCAAATAAATCTTC+AGG + chr3_2:39758014-39758033 None:intergenic 35.0%
! AAGCTTTTCTAAGCAATGTG+CGG - chr3_2:39758112-39758131 Msa0405250:intron 35.0%
! AAAACCATGGATTTTCTTGC+GGG + chr3_2:39758142-39758161 None:intergenic 35.0%
ACCCATGAAAATGTGAATTC+AGG - chr3_2:39758170-39758189 Msa0405250:intron 35.0%
! CTCCTGAATTCACATTTTCA+TGG + chr3_2:39758175-39758194 None:intergenic 35.0%
TTTCAAAGAAGGGTCATACA+TGG + chr3_2:39758198-39758217 None:intergenic 35.0%
! ATGACCCTTCTTTGAAAAAG+TGG - chr3_2:39758201-39758220 Msa0405250:intron 35.0%
!!! GATGCCACTTTTTCAAAGAA+GGG + chr3_2:39758208-39758227 None:intergenic 35.0%
!!! TGATGCCACTTTTTCAAAGA+AGG + chr3_2:39758209-39758228 None:intergenic 35.0%
GGCAAAACAATCAACTTTGT+GGG + chr3_2:39758251-39758270 None:intergenic 35.0%
TGGCAAAACAATCAACTTTG+TGG + chr3_2:39758252-39758271 None:intergenic 35.0%
!! AAAGTTGATTGTTTTGCCAG+TGG - chr3_2:39758253-39758272 Msa0405250:intron 35.0%
ATCTGAACGCATGAAGTATA+GGG + chr3_2:39758591-39758610 None:intergenic 35.0%
TTTCCTATGATATGGCAACA+GGG - chr3_2:39758624-39758643 Msa0405250:intron 35.0%
AATGCCAAATATATGGTGCT+TGG - chr3_2:39758814-39758833 Msa0405250:intron 35.0%
AAGTCCAAGCACCATATATT+TGG + chr3_2:39758821-39758840 None:intergenic 35.0%
! ATATGGTGCTTGGACTTTTA+TGG - chr3_2:39758824-39758843 Msa0405250:intron 35.0%
ATCGAAACAAATGAATCGGT+TGG - chr3_2:39758904-39758923 Msa0405250:intron 35.0%
TGGTTACTTACAACATAGCA+AGG - chr3_2:39758924-39758943 Msa0405250:intron 35.0%
ACAACATAGCAAGGAAAGAA+TGG - chr3_2:39758933-39758952 Msa0405250:intron 35.0%
TTTACTCTGTTAAACCAGAG+AGG + chr3_2:39759160-39759179 None:intergenic 35.0%
TTTGGGGACAAAAAATTGGA+TGG - chr3_2:39759369-39759388 Msa0405250:five_prime_UTR 35.0%
AAACCACGTTTCCAAGCAAA+CGG + chr3_2:39751999-39752018 None:intergenic 40.0%
TTACACGAGCGGGTAAAAAA+AGG - chr3_2:39752018-39752037 Msa0405250:three_prime_UTR 40.0%
AGCGGGTAAAAAAAGGAAGA+AGG - chr3_2:39752025-39752044 Msa0405250:three_prime_UTR 40.0%
TATTAGTAGAGGAAATCGGG+GGG - chr3_2:39752101-39752120 Msa0405250:three_prime_UTR 40.0%
! AGAAGGTTGCTGTTGAAGAA+TGG + chr3_2:39752228-39752247 None:intergenic 40.0%
AAGAGAGGGAAAACTAACCT+GGG + chr3_2:39752281-39752300 None:intergenic 40.0%
! TTTTTCCTTTTGCATCGCAC+GGG - chr3_2:39752351-39752370 Msa0405250:CDS 40.0%
AGAGGTGAAGTGAAGAATGA+AGG - chr3_2:39752622-39752641 Msa0405250:CDS 40.0%
GAAAACACATTGCGCATAGA+AGG + chr3_2:39752666-39752685 None:intergenic 40.0%
TGATATTAACACGGTCTTCG+TGG + chr3_2:39752806-39752825 None:intergenic 40.0%
AGATAGAGAGTGATGAGATC+AGG - chr3_2:39752936-39752955 Msa0405250:CDS 40.0%
TAGGTGCAGTGTACCAAATA+GGG + chr3_2:39752983-39753002 None:intergenic 40.0%
CGTAAGTCAAGGGATTGATT+AGG + chr3_2:39753053-39753072 None:intergenic 40.0%
CACAGCAACATGGTTCAATT+AGG - chr3_2:39753344-39753363 Msa0405250:CDS 40.0%
GGAGAGAATATATCTTCTCC+TGG + chr3_2:39753468-39753487 None:intergenic 40.0%
AAAGACTTGCCTCATGACTT+GGG - chr3_2:39753497-39753516 Msa0405250:CDS 40.0%
GGCCTCAAAAGACTTACAAA+TGG + chr3_2:39753559-39753578 None:intergenic 40.0%
CTGAAGAATTGTCAAGACCT+TGG + chr3_2:39753607-39753626 None:intergenic 40.0%
CATGTCATCAACAGTCAATG+GGG - chr3_2:39753718-39753737 Msa0405250:intron 40.0%
GGCAACACACTGATATGTTT+CGG - chr3_2:39753743-39753762 Msa0405250:intron 40.0%
CATATCCCGATTCAACATTG+TGG - chr3_2:39754238-39754257 Msa0405250:intron 40.0%
TATCCCGATTCAACATTGTG+GGG - chr3_2:39754240-39754259 Msa0405250:intron 40.0%
TGATATCAATCTCAGTTGGG+TGG - chr3_2:39754374-39754393 Msa0405250:intron 40.0%
TGATGATACATCCCAATGCA+GGG - chr3_2:39754414-39754433 Msa0405250:intron 40.0%
TGTCTATGATCTGGTGAGAT+AGG + chr3_2:39754904-39754923 None:intergenic 40.0%
! TAGTCAAAACTGTGGGTTGA+TGG + chr3_2:39754982-39755001 None:intergenic 40.0%
! GATCACTCATTAGCCTACAA+TGG + chr3_2:39755249-39755268 None:intergenic 40.0%
AGCGAATTAAGCAGTTAGGT+AGG - chr3_2:39755641-39755660 Msa0405250:intron 40.0%
AGCAGTTAGGTAGGTAAGTT+AGG - chr3_2:39755650-39755669 Msa0405250:intron 40.0%
TGTATGTAATGCGTGACTGT+GGG - chr3_2:39755690-39755709 Msa0405250:intron 40.0%
ACGCTTCTAATTCCATTCCA+AGG - chr3_2:39755760-39755779 Msa0405250:intron 40.0%
!!! ATTTTAGGGCATCCTTGGAA+TGG + chr3_2:39755775-39755794 None:intergenic 40.0%
AAATATAAAATTGGGGGGGG+GGG + chr3_2:39755885-39755904 None:intergenic 40.0%
ATCAGGGAAAATGGAATTGG+TGG - chr3_2:39755997-39756016 Msa0405250:intron 40.0%
!! GAATTGGTGGACTTGAATGT+TGG - chr3_2:39756010-39756029 Msa0405250:intron 40.0%
GAACTAGGTAGAATCGCAAT+GGG - chr3_2:39756272-39756291 Msa0405250:intron 40.0%
CATCTCATCCAAGTACTCTT+GGG - chr3_2:39756377-39756396 Msa0405250:intron 40.0%
! AGCTCATTTGCTGCCAAATA+AGG + chr3_2:39756494-39756513 None:intergenic 40.0%
AGCTTCTCAAAGATCGTTGT+CGG - chr3_2:39756510-39756529 Msa0405250:intron 40.0%
CTTTAATCACGTTCCTTGTG+TGG - chr3_2:39756711-39756730 Msa0405250:intron 40.0%
CATATCAACTTGACCACACA+AGG + chr3_2:39756727-39756746 None:intergenic 40.0%
TGTGTCCTCCTCCTTAAAAA+AGG - chr3_2:39756793-39756812 Msa0405250:intron 40.0%
!!! ATCCTCCTTTTTTAAGGAGG+AGG + chr3_2:39756801-39756820 None:intergenic 40.0%
GGTACTTTACTCTAACACCA+AGG - chr3_2:39757100-39757119 Msa0405250:intron 40.0%
TGATTTGACAAAGGTTCCCT+AGG + chr3_2:39757341-39757360 None:intergenic 40.0%
AGCTTACATGCAACATTCCT+AGG - chr3_2:39757580-39757599 Msa0405250:intron 40.0%
TGGGTTATGGTGTAAAACCA+TGG + chr3_2:39758155-39758174 None:intergenic 40.0%
CCTTGAAGGATTGAGTTAGT+GGG + chr3_2:39758340-39758359 None:intergenic 40.0%
TCCTTGAAGGATTGAGTTAG+TGG + chr3_2:39758341-39758360 None:intergenic 40.0%
TTCAGGCTACAAGATCCTAT+GGG - chr3_2:39758433-39758452 Msa0405250:intron 40.0%
!! ATGACTCGGTGAAAAACTCT+TGG - chr3_2:39758483-39758502 Msa0405250:intron 40.0%
AGTTTGCGACCTGAAGTTAA+GGG + chr3_2:39758552-39758571 None:intergenic 40.0%
GATCTGAACGCATGAAGTAT+AGG + chr3_2:39758592-39758611 None:intergenic 40.0%
! AGGGGTTGTTTCCTATGATA+TGG - chr3_2:39758616-39758635 Msa0405250:intron 40.0%
GTTTCCTATGATATGGCAAC+AGG - chr3_2:39758623-39758642 Msa0405250:intron 40.0%
TTCCTATGATATGGCAACAG+GGG - chr3_2:39758625-39758644 Msa0405250:intron 40.0%
AATAAGACCTGCAAATGGCA+AGG + chr3_2:39759109-39759128 None:intergenic 40.0%
!! TGCCATTTGCAGGTCTTATT+AGG - chr3_2:39759109-39759128 Msa0405250:CDS 40.0%
CACCTAATAAGACCTGCAAA+TGG + chr3_2:39759114-39759133 None:intergenic 40.0%
TTGTCCCCAAAGCACAAATA+TGG + chr3_2:39759360-39759379 None:intergenic 40.0%
!! GTGCTTTGGGGACAAAAAAT+TGG - chr3_2:39759365-39759384 Msa0405250:five_prime_UTR 40.0%
!! GAAACGTGGTTTTACACGAG+CGG - chr3_2:39752007-39752026 Msa0405250:three_prime_UTR 45.0%
!! AAACGTGGTTTTACACGAGC+GGG - chr3_2:39752008-39752027 Msa0405250:three_prime_UTR 45.0%
GAAGAGAGGGAAAACTAACC+TGG + chr3_2:39752282-39752301 None:intergenic 45.0%
!! AAGGAGTGTTTGTGGTGTCA+TGG + chr3_2:39752567-39752586 None:intergenic 45.0%
ATCCTCTGAGTTCCCCTATT+TGG - chr3_2:39752967-39752986 Msa0405250:CDS 45.0%
TACCAAATAGGGGAACTCAG+AGG + chr3_2:39752972-39752991 None:intergenic 45.0%
AGGTGCAGTGTACCAAATAG+GGG + chr3_2:39752982-39753001 None:intergenic 45.0%
CTAGGTGCAGTGTACCAAAT+AGG + chr3_2:39752984-39753003 None:intergenic 45.0%
AGAAGAGGGTCGTAAGTCAA+GGG + chr3_2:39753063-39753082 None:intergenic 45.0%
CAAGTCATGAGGCAAGTCTT+TGG + chr3_2:39753498-39753517 None:intergenic 45.0%
CAAAGACTTGCCTCATGACT+TGG - chr3_2:39753496-39753515 Msa0405250:CDS 45.0%
TCATCAACAGTCAATGGGGA+AGG - chr3_2:39753722-39753741 Msa0405250:intron 45.0%
! CACTGATATGTTTCGGTGCA+AGG - chr3_2:39753750-39753769 Msa0405250:intron 45.0%
! CTGGGTAAGGTTTGTTTGGA+AGG + chr3_2:39753798-39753817 None:intergenic 45.0%
! GCTACTGGGTAAGGTTTGTT+TGG + chr3_2:39753802-39753821 None:intergenic 45.0%
TTGCAGCACAAGAAGATCCA+GGG + chr3_2:39753834-39753853 None:intergenic 45.0%
TTTGCAGCACAAGAAGATCC+AGG + chr3_2:39753835-39753854 None:intergenic 45.0%
! CCTTTTGTGGAAGCTAACAC+TGG + chr3_2:39754204-39754223 None:intergenic 45.0%
! CCAGTGTTAGCTTCCACAAA+AGG - chr3_2:39754201-39754220 Msa0405250:intron 45.0%
ATCCCGATTCAACATTGTGG+GGG - chr3_2:39754241-39754260 Msa0405250:intron 45.0%
GTGATGATACATCCCAATGC+AGG - chr3_2:39754413-39754432 Msa0405250:intron 45.0%
GACTCTCTGCGTCTATGATA+TGG + chr3_2:39755041-39755060 None:intergenic 45.0%
TGGCGTCAATTTCACTTGTG+TGG - chr3_2:39755195-39755214 Msa0405250:intron 45.0%
TGTGAGATCCAACCCATTGT+AGG - chr3_2:39755233-39755252 Msa0405250:intron 45.0%
! CTCATTAGCCTACAATGGGT+TGG + chr3_2:39755244-39755263 None:intergenic 45.0%
CTGTATGTAATGCGTGACTG+TGG - chr3_2:39755689-39755708 Msa0405250:intron 45.0%
!!! GTTGCATTTTAGGGCATCCT+TGG + chr3_2:39755780-39755799 None:intergenic 45.0%
AATATAAAATTGGGGGGGGG+GGG + chr3_2:39755884-39755903 None:intergenic 45.0%
TGACAATCTCCTTGATCCTG+TGG - chr3_2:39755942-39755961 Msa0405250:intron 45.0%
AGAGACTAATCCCTCGAACT+AGG - chr3_2:39756257-39756276 Msa0405250:intron 45.0%
TGCGATTCTACCTAGTTCGA+GGG + chr3_2:39756270-39756289 None:intergenic 45.0%
TTGCGATTCTACCTAGTTCG+AGG + chr3_2:39756271-39756290 None:intergenic 45.0%
CGAACTAGGTAGAATCGCAA+TGG - chr3_2:39756271-39756290 Msa0405250:intron 45.0%
TTAACCAGAGGTTTAGCCCT+AGG + chr3_2:39756338-39756357 None:intergenic 45.0%
AAACCTCTGGTTAACCTGGA+AGG - chr3_2:39756344-39756363 Msa0405250:intron 45.0%
GTACTTGGATGAGATGGAGA+GGG + chr3_2:39756373-39756392 None:intergenic 45.0%
AGTACTTGGATGAGATGGAG+AGG + chr3_2:39756374-39756393 None:intergenic 45.0%
!! CCAAGAGTACTTGGATGAGA+TGG + chr3_2:39756379-39756398 None:intergenic 45.0%
CCATCTCATCCAAGTACTCT+TGG - chr3_2:39756376-39756395 Msa0405250:intron 45.0%
TTTGTCATAGCGTCGTGCAT+AGG - chr3_2:39756666-39756685 Msa0405250:intron 45.0%
GTCCTCCTCCTTAAAAAAGG+AGG - chr3_2:39756796-39756815 Msa0405250:intron 45.0%
TTGATGGGGAAAGTTCTACG+TGG - chr3_2:39757371-39757390 Msa0405250:intron 45.0%
ACATTTACAGGGACATCAGC+AGG + chr3_2:39757727-39757746 None:intergenic 45.0%
GCTGATGTCCCTGTAAATGT+TGG - chr3_2:39757727-39757746 Msa0405250:intron 45.0%
AAGGAGGTCCATCTGCAAAA+TGG + chr3_2:39757798-39757817 None:intergenic 45.0%
AGAGCTATCTTCGAGGTCAA+AGG + chr3_2:39757817-39757836 None:intergenic 45.0%
CATCTACAGAGCTATCTTCG+AGG + chr3_2:39757824-39757843 None:intergenic 45.0%
AGCTCTGTAGATGACTGTTG+TGG - chr3_2:39757831-39757850 Msa0405250:intron 45.0%
!! TGACTGTTGTGGCCTTGTAA+TGG - chr3_2:39757842-39757861 Msa0405250:intron 45.0%
ACTTTCCAGCTGCCATTACA+AGG + chr3_2:39757857-39757876 None:intergenic 45.0%
ATCTCTTCGAGGCTTCTTAG+CGG + chr3_2:39757919-39757938 None:intergenic 45.0%
CCAGCAAGGAATTCCATTGA+CGG + chr3_2:39758085-39758104 None:intergenic 45.0%
!! AAAGCTTTGAGAAGCCAGCA+AGG + chr3_2:39758099-39758118 None:intergenic 45.0%
AAGTCCCGCAAGAAAATCCA+TGG - chr3_2:39758135-39758154 Msa0405250:intron 45.0%
ACAATCAACTTTGTGGGCAG+TGG + chr3_2:39758245-39758264 None:intergenic 45.0%
CCCACTAACTCAATCCTTCA+AGG - chr3_2:39758337-39758356 Msa0405250:intron 45.0%
GTTCAGGCTACAAGATCCTA+TGG - chr3_2:39758432-39758451 Msa0405250:intron 45.0%
AAAAACTCTTGGAGTCGTCC+AGG - chr3_2:39758494-39758513 Msa0405250:intron 45.0%
ATACTTCCAGGCATGTTTCC+TGG + chr3_2:39758515-39758534 None:intergenic 45.0%
AATGGCAGGTTCATACTTCC+AGG + chr3_2:39758527-39758546 None:intergenic 45.0%
TGAAGTTAAGGGACAATGGC+AGG + chr3_2:39758541-39758560 None:intergenic 45.0%
TGCCATTGTCCCTTAACTTC+AGG - chr3_2:39758540-39758559 Msa0405250:intron 45.0%
GACCTGAAGTTAAGGGACAA+TGG + chr3_2:39758545-39758564 None:intergenic 45.0%
CAGTTTGCGACCTGAAGTTA+AGG + chr3_2:39758553-39758572 None:intergenic 45.0%
TTCATGCGTTCAGATCCAGA+AGG - chr3_2:39758596-39758615 Msa0405250:intron 45.0%
TCATGCGTTCAGATCCAGAA+GGG - chr3_2:39758597-39758616 Msa0405250:intron 45.0%
TCATAGGAAACAACCCCTTC+TGG + chr3_2:39758614-39758633 None:intergenic 45.0%
AACCCCTGTTGCCATATCAT+AGG + chr3_2:39758630-39758649 None:intergenic 45.0%
ATGATATGGCAACAGGGGTT+TGG - chr3_2:39758630-39758649 Msa0405250:intron 45.0%
GTGTGGTCAGTCAAATGTAG+TGG + chr3_2:39758677-39758696 None:intergenic 45.0%
CATCATACTCAGCTAGAGTG+TGG + chr3_2:39758694-39758713 None:intergenic 45.0%
CACACTCTAGCTGAGTATGA+TGG - chr3_2:39758692-39758711 Msa0405250:intron 45.0%
TGATGGTCAGATCATGCTTG+TGG - chr3_2:39758709-39758728 Msa0405250:intron 45.0%
GATGGTCAGATCATGCTTGT+GGG - chr3_2:39758710-39758729 Msa0405250:intron 45.0%
AGCCACGTGTGTATGCATAT+GGG - chr3_2:39758751-39758770 Msa0405250:intron 45.0%
TGCAGAGAATGACACTCTTG+TGG - chr3_2:39758777-39758796 Msa0405250:intron 45.0%
GAGAATGACACTCTTGTGGA+AGG - chr3_2:39758781-39758800 Msa0405250:intron 45.0%
AATGACACTCTTGTGGAAGG+AGG - chr3_2:39758784-39758803 Msa0405250:intron 45.0%
! ACGTCAGAATGACTTGCCTA+GGG - chr3_2:39758852-39758871 Msa0405250:intron 45.0%
! ATGACTTGCCTAGGGAACAA+AGG - chr3_2:39758860-39758879 Msa0405250:intron 45.0%
AGCAAGGAAAGAATGGCTGA+AGG - chr3_2:39758940-39758959 Msa0405250:intron 45.0%
AAAGAATGGCTGAAGGTTCC+TGG - chr3_2:39758947-39758966 Msa0405250:intron 45.0%
AAGAATGGCTGAAGGTTCCT+GGG - chr3_2:39758948-39758967 Msa0405250:intron 45.0%
ATTTCATCCATGCTTGACCG+CGG - chr3_2:39759021-39759040 Msa0405250:intron 45.0%
AAGACGAGCAAAAAAGTGGC+AGG + chr3_2:39759080-39759099 None:intergenic 45.0%
CCACAAGACGAGCAAAAAAG+TGG + chr3_2:39759084-39759103 None:intergenic 45.0%
!!! CCACTTTTTTGCTCGTCTTG+TGG - chr3_2:39759081-39759100 Msa0405250:CDS 45.0%
TTAAACCAGAGAGGAACGCT+GGG + chr3_2:39759151-39759170 None:intergenic 45.0%
!!! TTATCTTAAATTTTAATTTT+TGG - chr3_2:39754493-39754512 Msa0405250:intron 5.0%
!! AAATAAATAAAAGAATAATT+GGG + chr3_2:39755734-39755753 None:intergenic 5.0%
!! TAAATAAATAAAAGAATAAT+TGG + chr3_2:39755735-39755754 None:intergenic 5.0%
ACTCCGTTTGCTTGGAAACG+TGG - chr3_2:39751993-39752012 Msa0405250:three_prime_UTR 50.0%
GAGGGAAAACTAACCTGGGA+GGG + chr3_2:39752277-39752296 None:intergenic 50.0%
AGAGGGAAAACTAACCTGGG+AGG + chr3_2:39752278-39752297 None:intergenic 50.0%
!! CACGGGTAGACCTCTAGTTT+TGG - chr3_2:39752368-39752387 Msa0405250:CDS 50.0%
!! ATTTTAGTGCCCGAGGCTGT+AGG - chr3_2:39752865-39752884 Msa0405250:CDS 50.0%
CACAACAAACCTACAGCCTC+GGG + chr3_2:39752877-39752896 None:intergenic 50.0%
GCACAACAAACCTACAGCCT+CGG + chr3_2:39752878-39752897 None:intergenic 50.0%
CAGAAGAGGGTCGTAAGTCA+AGG + chr3_2:39753064-39753083 None:intergenic 50.0%
!! AGGCAAGTCTTTGGAGCTTC+GGG + chr3_2:39753489-39753508 None:intergenic 50.0%
!! GAGGCAAGTCTTTGGAGCTT+CGG + chr3_2:39753490-39753509 None:intergenic 50.0%
GAAGGCGAAAGAGACCTTGA+TGG + chr3_2:39753780-39753799 None:intergenic 50.0%
AGCACAAGAAGATCCAGGGA+GGG + chr3_2:39753830-39753849 None:intergenic 50.0%
TTCCACAAAAGGCCCAGTGA+TGG - chr3_2:39754212-39754231 Msa0405250:intron 50.0%
CGGGATATGACACCATCACT+GGG + chr3_2:39754227-39754246 None:intergenic 50.0%
TCGGGATATGACACCATCAC+TGG + chr3_2:39754228-39754247 None:intergenic 50.0%
CTCCCCCACAATGTTGAATC+GGG + chr3_2:39754246-39754265 None:intergenic 50.0%
GCTCCCCCACAATGTTGAAT+CGG + chr3_2:39754247-39754266 None:intergenic 50.0%
GATTCAACATTGTGGGGGAG+CGG - chr3_2:39754246-39754265 Msa0405250:intron 50.0%
ATTCAACATTGTGGGGGAGC+GGG - chr3_2:39754247-39754266 Msa0405250:intron 50.0%
ATATAAAATTGGGGGGGGGG+GGG + chr3_2:39755883-39755902 None:intergenic 50.0%
CAATCTCCTTGATCCTGTGG+TGG - chr3_2:39755945-39755964 Msa0405250:intron 50.0%
TCCTTGATCCTGTGGTGGTT+TGG - chr3_2:39755950-39755969 Msa0405250:intron 50.0%
CCTTGATCCTGTGGTGGTTT+GGG - chr3_2:39755951-39755970 Msa0405250:intron 50.0%
! ATCCTGTGGTGGTTTGGGTT+TGG - chr3_2:39755956-39755975 Msa0405250:intron 50.0%
TACCAAACCCAAACCACCAC+AGG + chr3_2:39755961-39755980 None:intergenic 50.0%
ACCGCCAAATACGGCTGATT+TGG - chr3_2:39756180-39756199 Msa0405250:intron 50.0%
GCCAAATCAGCCGTATTTGG+CGG + chr3_2:39756184-39756203 None:intergenic 50.0%
ACGGCCAAATCAGCCGTATT+TGG + chr3_2:39756187-39756206 None:intergenic 50.0%
CATTCCTAGGGCTAAACCTC+TGG - chr3_2:39756331-39756350 Msa0405250:intron 50.0%
GGCTAAACCTCTGGTTAACC+TGG - chr3_2:39756340-39756359 Msa0405250:intron 50.0%
CTACCTTCCAGGTTAACCAG+AGG + chr3_2:39756350-39756369 None:intergenic 50.0%
CTCATCCAAGTACTCTTGGG+TGG - chr3_2:39756380-39756399 Msa0405250:intron 50.0%
CTAACCATTCGTTCAGGCTC+AGG - chr3_2:39756848-39756867 Msa0405250:intron 50.0%
AGTACCTGAGCCTGAACGAA+TGG + chr3_2:39756855-39756874 None:intergenic 50.0%
GCTATCTTCGAGGTCAAAGG+AGG + chr3_2:39757814-39757833 None:intergenic 50.0%
TCTCTTCGAGGCTTCTTAGC+GGG + chr3_2:39757918-39757937 None:intergenic 50.0%
AAGCGGAAAAACGCGGCAAT+GGG + chr3_2:39758050-39758069 None:intergenic 50.0%
TCCATTGACGGCATACAGAG+CGG + chr3_2:39758073-39758092 None:intergenic 50.0%
CCGTCAATGGAATTCCTTGC+TGG - chr3_2:39758082-39758101 Msa0405250:intron 50.0%
GTGGGCAGTGGTGATATAGA+CGG + chr3_2:39758233-39758252 None:intergenic 50.0%
! TTTTGCCAGTGGCTTCTGCT+GGG - chr3_2:39758264-39758283 Msa0405250:intron 50.0%
GCTGTAGGGATGACAGTGAA+TGG - chr3_2:39758398-39758417 Msa0405250:intron 50.0%
AGGCTACAAGATCCTATGGG+TGG - chr3_2:39758436-39758455 Msa0405250:intron 50.0%
GGCTACAAGATCCTATGGGT+GGG - chr3_2:39758437-39758456 Msa0405250:intron 50.0%
!! ATCCTATGGGTGGGTTGTGA+TGG - chr3_2:39758446-39758465 Msa0405250:intron 50.0%
CATGCGTTCAGATCCAGAAG+GGG - chr3_2:39758598-39758617 Msa0405250:intron 50.0%
CAGTCAAATGTAGTGGCGCT+GGG + chr3_2:39758670-39758689 None:intergenic 50.0%
TCAGTCAAATGTAGTGGCGC+TGG + chr3_2:39758671-39758690 None:intergenic 50.0%
CAGCCACGTGTGTATGCATA+TGG - chr3_2:39758750-39758769 Msa0405250:intron 50.0%
CTCCCATATGCATACACACG+TGG + chr3_2:39758756-39758775 None:intergenic 50.0%
! CACGTCAGAATGACTTGCCT+AGG - chr3_2:39758851-39758870 Msa0405250:intron 50.0%
TGAGCAAGCCTTTGTTCCCT+AGG + chr3_2:39758871-39758890 None:intergenic 50.0%
! TGGTGCCGAATGGGAAGAAA+CGG - chr3_2:39758975-39758994 Msa0405250:intron 50.0%
! CACTGCCGTTTCTTCCCATT+CGG + chr3_2:39758983-39759002 None:intergenic 50.0%
AAACGGCAGTGGATAGCATG+TGG - chr3_2:39758992-39759011 Msa0405250:intron 50.0%
CAAGGAAAATCAAGCCACCG+CGG + chr3_2:39759041-39759060 None:intergenic 50.0%
GGTCGTTGCTGTAAGGTACA+AGG + chr3_2:39759059-39759078 None:intergenic 50.0%
! TGTGGTTCCTTGCCATTTGC+AGG - chr3_2:39759099-39759118 Msa0405250:CDS 50.0%
GTTAAACCAGAGAGGAACGC+TGG + chr3_2:39759152-39759171 None:intergenic 50.0%
CGCACGGGCGATTGAGTATA+TGG - chr3_2:39751934-39751953 Msa0405250:three_prime_UTR 55.0%
TAGTAGAGGAAATCGGGGGG+AGG - chr3_2:39752104-39752123 Msa0405250:three_prime_UTR 55.0%
AGTAGAGGAAATCGGGGGGA+GGG - chr3_2:39752105-39752124 Msa0405250:three_prime_UTR 55.0%
GCCATGCTGAAGCAGCTCAT+CGG - chr3_2:39752152-39752171 Msa0405250:three_prime_UTR 55.0%
ACCGATGAGCTGCTTCAGCA+TGG + chr3_2:39752156-39752175 None:intergenic 55.0%
TCCTTCAACATCACCCTCCC+AGG - chr3_2:39752261-39752280 Msa0405250:three_prime_UTR 55.0%
ACCTGGGAGGGTGATGTTGA+AGG + chr3_2:39752265-39752284 None:intergenic 55.0%
GTCTACCCGTGCGATGCAAA+AGG + chr3_2:39752359-39752378 None:intergenic 55.0%
CGGTGCAAGGTTGACCATCA+AGG - chr3_2:39753763-39753782 Msa0405250:intron 55.0%
ACAAGAAGATCCAGGGAGGG+GGG + chr3_2:39753827-39753846 None:intergenic 55.0%
CACAAGAAGATCCAGGGAGG+GGG + chr3_2:39753828-39753847 None:intergenic 55.0%
GCACAAGAAGATCCAGGGAG+GGG + chr3_2:39753829-39753848 None:intergenic 55.0%
CAGCACAAGAAGATCCAGGG+AGG + chr3_2:39753831-39753850 None:intergenic 55.0%
TTGGATACCCGTGCCAAGCA+CGG - chr3_2:39753981-39754000 Msa0405250:intron 55.0%
ATTCTAGCCCGTGCTTGGCA+CGG + chr3_2:39753992-39754011 None:intergenic 55.0%
GCGAAATTCTAGCCCGTGCT+TGG + chr3_2:39753997-39754016 None:intergenic 55.0%
! CACCATCACTGGGCCTTTTG+TGG + chr3_2:39754217-39754236 None:intergenic 55.0%
CTTTCGTGGGACCCTGCATT+GGG + chr3_2:39754428-39754447 None:intergenic 55.0%
ACTTTCGTGGGACCCTGCAT+TGG + chr3_2:39754429-39754448 None:intergenic 55.0%
TATAAAATTGGGGGGGGGGG+GGG + chr3_2:39755882-39755901 None:intergenic 55.0%
CCCAAACCACCACAGGATCA+AGG + chr3_2:39755954-39755973 None:intergenic 55.0%
!! TACGGCCACCCAAGAGTACT+TGG + chr3_2:39756388-39756407 None:intergenic 55.0%
CTCTTGGGTGGCCGTAATTG+TGG - chr3_2:39756392-39756411 Msa0405250:intron 55.0%
!! TGTGGCCTTGTAATGGCAGC+TGG - chr3_2:39757849-39757868 Msa0405250:intron 55.0%
AGCCTCGAAGAGATCGAAGC+AGG - chr3_2:39757925-39757944 Msa0405250:intron 55.0%
GCCTCGAAGAGATCGAAGCA+GGG - chr3_2:39757926-39757945 Msa0405250:intron 55.0%
CCTCGAAGAGATCGAAGCAG+GGG - chr3_2:39757927-39757946 Msa0405250:intron 55.0%
CGAAGCAGGGGCAAATCATC+AGG - chr3_2:39757939-39757958 Msa0405250:intron 55.0%
GAAGCGGAAAAACGCGGCAA+TGG + chr3_2:39758051-39758070 None:intergenic 55.0%
AGAGCGGAAGCGGAAAAACG+CGG + chr3_2:39758057-39758076 None:intergenic 55.0%
TCCGCTCTGTATGCCGTCAA+TGG - chr3_2:39758069-39758088 Msa0405250:intron 55.0%
! GTTTTGCCAGTGGCTTCTGC+TGG - chr3_2:39758263-39758282 Msa0405250:intron 55.0%
TTTGCCAGTGGCTTCTGCTG+GGG - chr3_2:39758265-39758284 Msa0405250:intron 55.0%
CCTTCAAGGAGTTGCCAGCT+CGG - chr3_2:39758351-39758370 Msa0405250:intron 55.0%
GTTGCCAGCTCGGTCAGTTA+AGG - chr3_2:39758361-39758380 Msa0405250:intron 55.0%
CAGACCTTAACTGACCGAGC+TGG + chr3_2:39758368-39758387 None:intergenic 55.0%
CAGCTCGGTCAGTTAAGGTC+TGG - chr3_2:39758366-39758385 Msa0405250:intron 55.0%
TCTGGTCTCGCGTTGCTGTA+GGG - chr3_2:39758384-39758403 Msa0405250:intron 55.0%
CTCCATCACAACCCACCCAT+AGG + chr3_2:39758451-39758470 None:intergenic 55.0%
AGTCGTCCAGGAAACATGCC+TGG - chr3_2:39758506-39758525 Msa0405250:intron 55.0%
CGAATGGGAAGAAACGGCAG+TGG - chr3_2:39758981-39759000 Msa0405250:intron 55.0%
AGTGGCAGGTCGTTGCTGTA+AGG + chr3_2:39759066-39759085 None:intergenic 55.0%
CAGAGAGGAACGCTGGGATT+AGG + chr3_2:39759145-39759164 None:intergenic 55.0%
CTAATCCCAGCGTTCCTCTC+TGG - chr3_2:39759143-39759162 Msa0405250:CDS 55.0%
GTAGAGGAAATCGGGGGGAG+GGG - chr3_2:39752106-39752125 Msa0405250:three_prime_UTR 60.0%
TAGAGGAAATCGGGGGGAGG+GGG - chr3_2:39752107-39752126 Msa0405250:three_prime_UTR 60.0%
!! GGGGGCATTAGCGCATGGAA+GGG - chr3_2:39752126-39752145 Msa0405250:three_prime_UTR 60.0%
GCATTAGCGCATGGAAGGGC+TGG - chr3_2:39752130-39752149 Msa0405250:three_prime_UTR 60.0%
TGGATACCCGTGCCAAGCAC+GGG - chr3_2:39753982-39754001 Msa0405250:intron 60.0%
TTCTAGCCCGTGCTTGGCAC+GGG + chr3_2:39753991-39754010 None:intergenic 60.0%
ATAAAATTGGGGGGGGGGGG+GGG + chr3_2:39755881-39755900 None:intergenic 60.0%
GATGGAGAGGGCTACCTTCC+AGG + chr3_2:39756361-39756380 None:intergenic 60.0%
CAGACTGAGCCCATGCGATC+AGG + chr3_2:39757616-39757635 None:intergenic 60.0%
! TTAGCGGGTGGAGGCTTCAG+AGG + chr3_2:39757903-39757922 None:intergenic 60.0%
CTTCGAGGCTTCTTAGCGGG+TGG + chr3_2:39757915-39757934 None:intergenic 60.0%
CCCCTGCTTCGATCTCTTCG+AGG + chr3_2:39757930-39757949 None:intergenic 60.0%
GACGGCATACAGAGCGGAAG+CGG + chr3_2:39758067-39758086 None:intergenic 60.0%
TTGCCAGTGGCTTCTGCTGG+GGG - chr3_2:39758266-39758285 Msa0405250:intron 60.0%
AAACCCCCAGCAGAAGCCAC+TGG + chr3_2:39758272-39758291 None:intergenic 60.0%
CCGAGCTGGCAACTCCTTGA+AGG + chr3_2:39758354-39758373 None:intergenic 60.0%
GTCTGGTCTCGCGTTGCTGT+AGG - chr3_2:39758383-39758402 Msa0405250:intron 60.0%
GCTGAAGGTTCCTGGGTGTG+TGG - chr3_2:39758955-39758974 Msa0405250:intron 60.0%
! CTGGGTGTGTGGTGCCGAAT+GGG - chr3_2:39758966-39758985 Msa0405250:intron 60.0%
TCATCCATGCTTGACCGCGG+TGG - chr3_2:39759024-39759043 Msa0405250:intron 60.0%
AGAGGAAATCGGGGGGAGGG+GGG - chr3_2:39752108-39752127 Msa0405250:three_prime_UTR 65.0%
!! GGGGGGCATTAGCGCATGGA+AGG - chr3_2:39752125-39752144 Msa0405250:three_prime_UTR 65.0%
AGGGGGGAGGCTACTGGGTA+AGG + chr3_2:39753811-39753830 None:intergenic 65.0%
AGAAGATCCAGGGAGGGGGG+AGG + chr3_2:39753824-39753843 None:intergenic 65.0%
ACATTGTGGGGGAGCGGGAG+TGG - chr3_2:39754252-39754271 Msa0405250:intron 65.0%
CATTGTGGGGGAGCGGGAGT+GGG - chr3_2:39754253-39754272 Msa0405250:intron 65.0%
TAAAATTGGGGGGGGGGGGG+GGG + chr3_2:39755880-39755899 None:intergenic 65.0%
! CGAGGCTTCTTAGCGGGTGG+AGG + chr3_2:39757912-39757931 None:intergenic 65.0%
CCATTCGGCACCACACACCC+AGG + chr3_2:39758968-39758987 None:intergenic 65.0%
! CCTGGGTGTGTGGTGCCGAA+TGG - chr3_2:39758965-39758984 Msa0405250:intron 65.0%
CAAGCCACCGCGGTCAAGCA+TGG + chr3_2:39759031-39759050 None:intergenic 65.0%
!! GGGAGGGGGGCATTAGCGCA+TGG - chr3_2:39752121-39752140 Msa0405250:three_prime_UTR 70.0%
CAGGGAGGGGGGAGGCTACT+GGG + chr3_2:39753816-39753835 None:intergenic 70.0%
GGAGCGGGAGTGGGTCTTGG+TGG - chr3_2:39754262-39754281 Msa0405250:intron 70.0%
GCGGGAGTGGGTCTTGGTGG+TGG - chr3_2:39754265-39754284 Msa0405250:intron 70.0%
AAAATTGGGGGGGGGGGGGG+GGG + chr3_2:39755879-39755898 None:intergenic 70.0%
CCAGGGAGGGGGGAGGCTAC+TGG + chr3_2:39753817-39753836 None:intergenic 75.0%
CCAGTAGCCTCCCCCCTCCC+TGG - chr3_2:39753814-39753833 Msa0405250:intron 75.0%
GGGGGAGCGGGAGTGGGTCT+TGG - chr3_2:39754259-39754278 Msa0405250:intron 75.0%
AAATTGGGGGGGGGGGGGGG+GGG + chr3_2:39755878-39755897 None:intergenic 75.0%
! AATTGGGGGGGGGGGGGGGG+GGG + chr3_2:39755877-39755896 None:intergenic 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755876-39755895 None:intergenic 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755875-39755894 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:39755874-39755893 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 39751933 39759412 39751933 ID=Msa0405250;Name=Msa0405250
chr3_2 mRNA 39751933 39759412 39751933 ID=Msa0405250-mRNA-1;Parent=Msa0405250;Name=Msa0405250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=207|1|1|1|1|1|2|361|462
chr3_2 exon 39751933 39753539 39751933 ID=Msa0405250-mRNA-1:exon:7756;Parent=Msa0405250-mRNA-1
chr3_2 exon 39759063 39759412 39759063 ID=Msa0405250-mRNA-1:exon:7755;Parent=Msa0405250-mRNA-1
chr3_2 five_prime_UTR 39759206 39759412 39759206 ID=Msa0405250-mRNA-1:five_prime_utr;Parent=Msa0405250-mRNA-1
chr3_2 CDS 39759063 39759205 39759063 ID=Msa0405250-mRNA-1:cds;Parent=Msa0405250-mRNA-1
chr3_2 CDS 39752294 39753539 39752294 ID=Msa0405250-mRNA-1:cds;Parent=Msa0405250-mRNA-1
chr3_2 three_prime_UTR 39751933 39752293 39751933 ID=Msa0405250-mRNA-1:three_prime_utr;Parent=Msa0405250-mRNA-1
Gene Sequence

>Msa0405250

ATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGCAACTTCTCGACTCTCATCATCATTCTTCTTCTTCTTCTTCCATTCTTCAACAGCAACCTTCTCATCAAACTATCTTCCTTCAACATCACCCTCCCAGATGGACCTCCTTTGACCTCGAAGATAGCTCTGTAGATGACTGTTGTGGCCTTGTAATGGCAGCTGGAAAGTCTCATAGTTTTAGGATGTCAGAGCCTCTGAAGCCTCCACCCGCTAAGAAGCCTCGAAGAGATCGAAGCAGGGGCAAATCATCAGGAAGATCCAGTACAAGTGAAGTTATGGAACAAGAAATATGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTAATTGCACGACTTCCCATTGCCGCGTTTTTCCGCTTCCGCTCTGTATGCCGTCAATGGAATTCCTTGCTGGCTTCTCAAAGCTTTTCTAAGCAATGTGCGGAAGTCCCGCAAGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGACCCTTCTTTGAAAAAGTGGCATCATCCGTCTATATCACCACTGCCCACAAAGTTGATTGTTTTGCCAGTGGCTTCTGCTGGGGGTTTAGTTTGCTTTCTTGACATTGGCCATCGTAACTTCTATGTATGTAACCCACTAACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTTAAGGTCTGGTCTCGCGTTGCTGTAGGGATGACAGTGAATGGAAATTCAATCAGTTCAGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAATATGAAGTTTATGACTCGGTGAAAAACTCTTGGAGTCGTCCAGGAAACATGCCTGGAAGTATGAACCTGCCATTGTCCCTTAACTTCAGGTCGCAAACTGTCTCTATTGACAGTACCCTATACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCCTATGATATGGCAACAGGGGTTTGGAAACAGTACATAATCCCAGCGCCACTACATTTGACTGACCACACTCTAGCTGAGTATGATGGTCAGATCATGCTTGTGGGCTTGCTCACAAAGAATGCAGCCACGTGTGTATGCATATGGGAGCTGCAGAGAATGACACTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTCAGAATGACTTGCCTAGGGAACAAAGGCTTGCTCATGTTGTCTCTGAGATCGAAACAAATGAATCGGTTGGTTACTTACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGAATGGGAAGAAACGGCAGTGGATAGCATGTGGTACTGCATTTCATCCATGCTTGACCGCGGTGGCTTGA
Protein sequence

>Msa0405250

MEGLAMLKQLIGQLQQLLDSHHHSSSSSSILQQQPSHQTIFLQHHPPRWTSFDLEDSSVDDCCGLVMAAGKSHSFRMSEPLKPPPAKKPRRDRSRGKSSGRSSTSEVMEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNGNSISSGYKILWVGCDGEYEVYDSVKNSWSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLHLTDHTLAEYDGQIMLVGLLTKNAATCVCIWELQRMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPNGKKRQWIACGTAFHPCLTAVA*