AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0558420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558420 MtrunA17_Chr4g0048161 99.365 630 3 1 1 630 1 629 0.0 1303
Msa0558420 MtrunA17_Chr2g0281171 77.603 634 138 2 1 630 1 634 0.0 1019
Msa0558420 MtrunA17_Chr4g0072691 64.274 613 194 8 34 629 2 606 0.0 790
Msa0558420 MtrunA17_Chr2g0304831 54.735 623 239 10 12 628 8 593 0.0 637
Msa0558420 MtrunA17_Chr6g0484131 41.752 491 254 12 13 479 2 484 1.63e-114 351
Msa0558420 MtrunA17_Chr8g0391221 46.193 394 198 6 13 397 2 390 1.77e-114 350
Msa0558420 MtrunA17_Chr6g0484121 41.955 491 253 12 13 479 2 484 9.65e-113 346
Msa0558420 MtrunA17_Chr4g0059411 45.558 439 226 8 17 447 2 435 5.84e-112 346
Msa0558420 MtrunA17_Chr8g0391211 46.134 388 193 5 13 389 73 455 9.97e-112 346
Msa0558420 MtrunA17_Chr6g0484111 45.844 397 197 8 13 397 2 392 8.07e-111 342
Msa0558420 MtrunA17_Chr7g0271691 34.550 411 220 13 55 450 44 420 4.42e-59 206
Msa0558420 MtrunA17_Chr7g0271671 34.024 338 200 8 55 381 60 385 2.75e-45 169
Msa0558420 MtrunA17_Chr7g0271681 37.024 289 172 6 96 379 10 293 3.98e-44 164
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558420 AT5G57580.1 61.442 638 206 12 15 625 13 637 0.0 751
Msa0558420 AT4G25800.1 62.019 624 185 12 24 630 9 597 0.0 740
Msa0558420 AT4G25800.2 62.019 624 185 12 24 630 9 597 0.0 740
Msa0558420 AT2G18750.3 58.488 648 221 11 1 629 1 619 0.0 736
Msa0558420 AT2G18750.2 58.488 648 221 11 1 629 1 619 0.0 736
Msa0558420 AT2G18750.1 58.488 648 221 11 1 629 1 619 0.0 736
Msa0558420 AT2G24300.3 53.333 615 247 11 25 628 18 603 0.0 610
Msa0558420 AT2G24300.2 53.333 615 247 11 25 628 14 599 0.0 610
Msa0558420 AT4G31000.1 50.977 614 222 12 25 628 18 562 0.0 573
Msa0558420 AT2G24300.1 52.265 574 237 10 63 628 8 552 0.0 555
Msa0558420 AT4G31000.2 45.440 614 235 13 25 628 18 541 5.09e-165 483
Msa0558420 AT5G62570.1 47.967 369 183 6 24 389 15 377 6.58e-112 345
Msa0558420 AT5G62570.4 46.739 368 187 6 24 388 15 376 2.20e-110 337
Msa0558420 AT5G62570.2 48.596 356 174 6 37 389 13 362 4.99e-110 340
Msa0558420 AT1G73805.1 43.655 394 196 13 33 419 27 401 7.66e-91 289
Msa0558420 AT5G62570.3 50.357 280 131 5 24 301 15 288 6.65e-87 273
Msa0558420 AT5G26920.3 37.466 371 218 5 38 407 28 385 1.17e-75 248
Msa0558420 AT5G26920.1 37.466 371 218 5 38 407 28 385 1.31e-74 249
Msa0558420 AT5G26920.2 36.927 371 212 6 38 407 28 377 1.04e-71 241

Find 203 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCATACTATCCACTTTC+AGG 0.165879 4_1:-57151268 None:intergenic
CTACTTTCCCGCCAGTAAAA+AGG 0.203080 4_1:-57152430 None:intergenic
GAAACCTGGATTGGTTTATT+TGG 0.224264 4_1:+57155308 Msa0558420:three_prime_UTR
CAACTTCAAAGAAGTGAAAA+TGG 0.241246 4_1:+57154750 Msa0558420:CDS
CTAGGTCCCACCAAGCTTAA+TGG 0.270553 4_1:+57152001 Msa0558420:CDS
ATCTTTCTTATGTAGATTCT+TGG 0.271515 4_1:+57153176 Msa0558420:intron
GACCTGCCGGTGCAGGAATA+TGG 0.284648 4_1:+57155388 Msa0558420:three_prime_UTR
GAAGGTTGGCCCGTATTTAC+TGG 0.288031 4_1:-57154109 None:intergenic
CATTCTGCTAATACCTTGTT+TGG 0.293015 4_1:-57151016 None:intergenic
CGTCAATTGCTTGATTGAAT+AGG 0.296767 4_1:+57155616 Msa0558420:three_prime_UTR
AAAATGCGTTATCATCAAAT+TGG 0.299882 4_1:-57154689 None:intergenic
AGTACAGTTGGTGTGATTAT+TGG 0.307744 4_1:-57150869 None:intergenic
GCACAACTGATTAAGAATTA+TGG 0.309088 4_1:-57155360 None:intergenic
GCTTGAAAGATCGCATGTTT+TGG 0.314452 4_1:+57155479 Msa0558420:three_prime_UTR
ATAATGAGGACGATGAAAAT+TGG 0.321922 4_1:+57152573 Msa0558420:CDS
TGAAGAAAGCATATGATAAT+TGG 0.328947 4_1:+57153942 Msa0558420:CDS
CGATCTGCAAGTTATATTAA+AGG 0.329553 4_1:+57152661 Msa0558420:CDS
TTTCCTGAGATTTCAAGTTT+AGG 0.329674 4_1:-57155536 None:intergenic
GGCAGCCATACATATTGTTT+TGG 0.333368 4_1:+57152466 Msa0558420:CDS
TGAAAGAACGTGAAGGAAAA+AGG 0.334477 4_1:+57152624 Msa0558420:CDS
AACAGTGAAAGCTTCTGATT+TGG 0.334732 4_1:-57152807 None:intergenic
CACTTCTTTGAAGTTGAGCT+TGG 0.344968 4_1:-57154743 None:intergenic
TTGTAGCTCATGTTGTTTGC+AGG 0.346018 4_1:-57155011 None:intergenic
ATCAGAAGCTTTCACTGTTA+AGG 0.352594 4_1:+57152811 Msa0558420:CDS
CTGGGCCTGACGTGACAATA+TGG 0.357739 4_1:-57152505 None:intergenic
GGTCTCTGATAACAAGTCTT+AGG 0.357889 4_1:-57153048 None:intergenic
CTTACAACTCTGCGTAGAAT+AGG 0.361688 4_1:-57151311 None:intergenic
TGTTGTGTTGTGTGTGTAGT+AGG 0.363924 4_1:-57150960 None:intergenic
CCCCACATTTCTTGCATCCT+CGG 0.372526 4_1:-57153285 None:intergenic
CTAATACGTATTTCTTCCTC+TGG 0.373734 4_1:-57154864 None:intergenic
AAGAACAAATACATCTAGTT+TGG 0.377151 4_1:-57152537 None:intergenic
TTTACTGGCGGGAAAGTAGA+AGG 0.384990 4_1:+57152434 Msa0558420:CDS
TCTAGTTTGGCACATGACTC+TGG 0.387351 4_1:-57152524 None:intergenic
CGGCCTTGCATGATGAGGTT+TGG 0.387698 4_1:+57152948 Msa0558420:CDS
CTAGATGTATTTGTTCTTGA+GGG 0.392152 4_1:+57152542 Msa0558420:CDS
TCTTCTCCAAAGCGCATAGA+AGG 0.396583 4_1:+57152356 Msa0558420:CDS
TTTATGTTCTCAATTTGAAT+TGG 0.397463 4_1:+57155690 Msa0558420:three_prime_UTR
CGGGCAAAGCTGTTGTGGGC+TGG 0.400583 4_1:+57155060 Msa0558420:CDS
TAGGTCCCACCAAGCTTAAT+GGG 0.401085 4_1:+57152002 Msa0558420:CDS
TTACTGGATGTGGCAAACTA+TGG 0.402100 4_1:-57154093 None:intergenic
TCTTTCTTATGTAGATTCTT+GGG 0.403004 4_1:+57153177 Msa0558420:intron
TAGGGCGGAGAAGAGAAGTT+TGG 0.406515 4_1:+57151068 Msa0558420:CDS
GGCATGTATGCAGATGGATT+AGG 0.406799 4_1:-57154990 None:intergenic
TGATCGGAAACGACCTGCTT+TGG 0.409072 4_1:+57151119 Msa0558420:CDS
TTCTTTGAAGTTGAGCTTGG+TGG 0.410617 4_1:-57154740 None:intergenic
AGCTCATCCTCAGGCTCTCA+TGG 0.414769 4_1:+57154030 Msa0558420:CDS
TCGGGGCCTTCTATGCGCTT+TGG 0.416408 4_1:-57152362 None:intergenic
CTGACAACTCCAGTTGGATA+AGG 0.417279 4_1:+57152717 Msa0558420:CDS
AATTGTAAATTATTGTCATC+GGG 0.421222 4_1:-57152380 None:intergenic
TCCTCGGGCAAAGCTGTTGT+GGG 0.426737 4_1:+57155056 Msa0558420:CDS
TGAAGAAGTGGAGCGTGCTT+TGG 0.427217 4_1:+57151973 Msa0558420:CDS
GATTCCACTTCTGCTGAAGA+TGG 0.432531 4_1:+57151090 Msa0558420:CDS
TTGAGCAAGGGCATGAAACC+TGG 0.434346 4_1:+57155294 Msa0558420:three_prime_UTR
TCTTTCAATTCCCACGAAGA+TGG 0.434601 4_1:+57154963 Msa0558420:CDS
GTTGCTCCTGTATCCATTGA+AGG 0.434943 4_1:-57154127 None:intergenic
TGTGGGCTGGCTCAAGCTTA+AGG 0.435478 4_1:+57155073 Msa0558420:CDS
CTGCATACTATCCACTTTCA+GGG 0.438176 4_1:-57151267 None:intergenic
GAGAATCAGCTGAGTGATAC+TGG 0.440984 4_1:-57153355 None:intergenic
GCATGTATGCAGATGGATTA+GGG 0.444130 4_1:-57154989 None:intergenic
CTTCCTACTCCTTATCCAAC+TGG 0.446989 4_1:-57152726 None:intergenic
AATTTGAAATGCTGGCAGTC+TGG 0.447809 4_1:-57154812 None:intergenic
AAAGCAGGTCGTTTCCGATC+AGG 0.448193 4_1:-57151117 None:intergenic
AGGAGTAGGAAGTTCAGATT+GGG 0.448651 4_1:+57152737 Msa0558420:CDS
TTCCTCGGGCAAAGCTGTTG+TGG 0.450883 4_1:+57155055 Msa0558420:CDS
TTTGCCACATCCAGTAAATA+CGG 0.451702 4_1:+57154099 Msa0558420:CDS
GAATTGGTGTGATGACTACT+TGG 0.455754 4_1:+57155706 Msa0558420:three_prime_UTR
GTAAGTAGAATTTGAAATGC+TGG 0.458447 4_1:-57154820 None:intergenic
AACCCGTGTGTTACTGTTTG+TGG 0.458824 4_1:-57154789 None:intergenic
GTTTGGAGACTGGAGAAGAT+TGG 0.459512 4_1:+57152965 Msa0558420:CDS
AAATACGGGCCAACCTTCAA+TGG 0.466350 4_1:+57154114 Msa0558420:CDS
CCCACATTTCTTGCATCCTC+GGG 0.466596 4_1:-57153284 None:intergenic
CTTTCAATTCCCACGAAGAT+GGG 0.466934 4_1:+57154964 Msa0558420:CDS
ATCAACCAAAACAATATGTA+TGG 0.469814 4_1:-57152471 None:intergenic
CTGAAGATGGTCAGCCTGAT+CGG 0.470951 4_1:+57151103 Msa0558420:CDS
TCTTTGAAGTTGAGCTTGGT+GGG 0.474459 4_1:-57154739 None:intergenic
AGCTTAAGGCAGCTTTGAGA+TGG 0.477017 4_1:+57155087 Msa0558420:CDS
TAATGTTGAGAAATTAGCCT+TGG 0.479384 4_1:-57155235 None:intergenic
GTATTAAGTTTGAATACTCA+TGG 0.479574 4_1:-57154057 None:intergenic
GCATGATGAGGTTTGGAGAC+TGG 0.484113 4_1:+57152955 Msa0558420:CDS
AAGGAGTAGGAAGTTCAGAT+TGG 0.484403 4_1:+57152736 Msa0558420:CDS
GGTCCTAAACTTGAAATCTC+AGG 0.484503 4_1:+57155533 Msa0558420:three_prime_UTR
CAATTGTAAATTATTGTCAT+CGG 0.484942 4_1:-57152381 None:intergenic
CTCCTGTATCCATTGAAGGT+TGG 0.485087 4_1:-57154123 None:intergenic
TTTACACGTTAATGATGGGT+TGG 0.488512 4_1:-57155446 None:intergenic
GTCTCTACTAAATTACAATC+AGG 0.488606 4_1:+57153991 Msa0558420:CDS
GCAGAGAGACCTGCCGGTGC+AGG 0.489733 4_1:+57155381 Msa0558420:three_prime_UTR
AGGATGGTTCCTTTCACAAA+AGG 0.490250 4_1:+57152990 Msa0558420:CDS
AACTTCAAAGAAGTGAAAAT+GGG 0.494858 4_1:+57154751 Msa0558420:CDS
GGTGGGGAACACTCATCAGC+TGG 0.498211 4_1:-57154722 None:intergenic
ATCCATATTCCTGCACCGGC+AGG 0.500866 4_1:-57155390 None:intergenic
AATTAGATGACTCTTGATCC+TGG 0.501393 4_1:+57155159 Msa0558420:exon
GCAGAAACTGTGTTCATCAC+TGG 0.505311 4_1:+57151286 Msa0558420:CDS
ACTAGATGTATTTGTTCTTG+AGG 0.505473 4_1:+57152541 Msa0558420:CDS
CTGGAGAAGATTGGTAAGGA+TGG 0.505500 4_1:+57152974 Msa0558420:CDS
TTGGGGCTGAAAGTTTCCTC+AGG 0.506119 4_1:+57152755 Msa0558420:CDS
CAAGGGCATGAAACCTGGAT+TGG 0.508639 4_1:+57155299 Msa0558420:three_prime_UTR
TTCTCTCTCTGAGAGTCAAA+AGG 0.509605 4_1:+57153373 Msa0558420:CDS
ATTAGTATTCTGTGATTGCA+TGG 0.512283 4_1:-57154652 None:intergenic
GCTTAAGGCAGCTTTGAGAT+GGG 0.515225 4_1:+57155088 Msa0558420:CDS
TTTGGAACCAGCTCATCCTC+AGG 0.515731 4_1:+57154021 Msa0558420:CDS
GAGACTGGAGAAGATTGGTA+AGG 0.515902 4_1:+57152970 Msa0558420:CDS
CCCGAGGATGCAAGAAATGT+GGG 0.517046 4_1:+57153284 Msa0558420:CDS
ATTATACCTCCCATTAAGCT+TGG 0.517672 4_1:-57152011 None:intergenic
ACGTTGATCATCATGTAGCT+AGG 0.518132 4_1:+57151049 Msa0558420:CDS
CACAAAAGGCTAAATAAAGC+AGG 0.518999 4_1:+57153004 Msa0558420:CDS
CTTTGAAGTTGAGCTTGGTG+GGG 0.521569 4_1:-57154738 None:intergenic
AAAGGATGGTGTAGGAACAC+TGG 0.526677 4_1:+57152679 Msa0558420:CDS
ATGCACGTTATTGAGTATGA+TGG 0.527033 4_1:+57153965 Msa0558420:CDS
GGCCAACCTTCAATGGATAC+AGG 0.527853 4_1:+57154121 Msa0558420:CDS
CTGACCATCTTCAGCAGAAG+TGG 0.529403 4_1:-57151094 None:intergenic
GCTCATCCTCAGGCTCTCAT+GGG 0.534799 4_1:+57154031 Msa0558420:CDS
GCTACGAAGTTTGAGCAAGA+TGG 0.534983 4_1:-57155265 None:intergenic
ACAGGCCATATTGTCACGTC+AGG 0.535118 4_1:+57152500 Msa0558420:CDS
CTAGTTTGGCACATGACTCT+GGG 0.535530 4_1:-57152523 None:intergenic
GGGAAAGTAGAAGGTGAGCA+AGG 0.540107 4_1:+57152443 Msa0558420:CDS
CTGTGATTGCATGGAGAAGC+TGG 0.540929 4_1:-57154643 None:intergenic
CATTTACTGACAACTCCAGT+TGG 0.541343 4_1:+57152711 Msa0558420:CDS
GTTATATTAAAGGATGGTGT+AGG 0.543007 4_1:+57152671 Msa0558420:CDS
TGGCCCGTATTTACTGGATG+TGG 0.543846 4_1:-57154103 None:intergenic
GAAGAAGGCTGCTGACAGAC+GGG 0.544326 4_1:+57155124 Msa0558420:CDS
ATGAGAGCCTGAGGATGAGC+TGG 0.545130 4_1:-57154028 None:intergenic
AGCACCAAATAAACCAATCC+AGG 0.545622 4_1:-57155312 None:intergenic
GGCTTCCCATGTTAAACATA+CGG 0.545819 4_1:-57154929 None:intergenic
AATCACATTTATGAATTGAG+CGG 0.549042 4_1:+57153317 Msa0558420:CDS
TACCTCCCATTAAGCTTGGT+GGG 0.550426 4_1:-57152007 None:intergenic
TTTGCTCCGTATGTTTAACA+TGG 0.552386 4_1:+57154923 Msa0558420:CDS
TTAATTAACCTAGCCAAAGC+AGG 0.554172 4_1:-57151132 None:intergenic
TTTGCAGGCATGTATGCAGA+TGG 0.554899 4_1:-57154996 None:intergenic
GGAAGAAGGCTGCTGACAGA+CGG 0.555602 4_1:+57155123 Msa0558420:CDS
ACCTCATCATGCAAGGCCGG+TGG 0.557048 4_1:-57152944 None:intergenic
GGAAACGACCTGCTTTGGCT+AGG 0.557280 4_1:+57151124 Msa0558420:CDS
TCGTAGCACGACTTTGAGCA+AGG 0.558333 4_1:+57155281 Msa0558420:three_prime_UTR
CAAACCTCATCATGCAAGGC+CGG 0.558896 4_1:-57152947 None:intergenic
ATACCTCCCATTAAGCTTGG+TGG 0.562645 4_1:-57152008 None:intergenic
TTTGTTTGAGGAACCAAACA+AGG 0.563155 4_1:+57151003 Msa0558420:five_prime_UTR
GGAAAGTAGAAGGTGAGCAA+GGG 0.563214 4_1:+57152444 Msa0558420:CDS
GAGCGTGCTTTGGCAAAACT+AGG 0.563474 4_1:+57151983 Msa0558420:CDS
AGTGAAAATGGGATGATGCT+TGG 0.563707 4_1:+57154762 Msa0558420:CDS
GCAGATCCATATTCCTGCAC+CGG 0.563751 4_1:-57155394 None:intergenic
GATACAGGAGCAACAGTTGG+AGG 0.566308 4_1:+57154136 Msa0558420:CDS
ATGTCTGCAGGTTATCATGA+TGG 0.567312 4_1:+57154612 Msa0558420:intron
CGTTGATCATCATGTAGCTA+GGG 0.569340 4_1:+57151050 Msa0558420:CDS
AAGGATGGTGTAGGAACACT+GGG 0.570410 4_1:+57152680 Msa0558420:CDS
CAGTTGGTGTGATTATTGGT+TGG 0.570966 4_1:-57150865 None:intergenic
ATTACCGTTACAGATCATAA+CGG 0.574070 4_1:-57155195 None:intergenic
GATTAGGGTACCCATCTTCG+TGG 0.574153 4_1:-57154974 None:intergenic
TTACATTACGCAATCTCTGA+GGG 0.574332 4_1:-57153069 None:intergenic
TCCCGAGGATGCAAGAAATG+TGG 0.574766 4_1:+57153283 Msa0558420:CDS
ATGGATACAGGAGCAACAGT+TGG 0.574946 4_1:+57154133 Msa0558420:CDS
AACGGATTAGCAATTCCTCC+AGG 0.575704 4_1:-57155177 None:intergenic
AGATGTATTTGTTCTTGAGG+GGG 0.579956 4_1:+57152544 Msa0558420:CDS
TATTAAGTTTGAATACTCAT+GGG 0.580134 4_1:-57154056 None:intergenic
GATTGTTGAAGCCCTGAAAG+TGG 0.581210 4_1:+57151256 Msa0558420:CDS
ACTCCAGTTGGATAAGGAGT+AGG 0.582137 4_1:+57152723 Msa0558420:CDS
TAATACGTATTTCTTCCTCT+GGG 0.582447 4_1:-57154863 None:intergenic
ATAACAGGTTAGTGAAGAAG+TGG 0.585362 4_1:+57151961 Msa0558420:intron
CTTATGTAGATTCTTGGGAG+CGG 0.585739 4_1:+57153182 Msa0558420:intron
CTGCAAGTTATATTAAAGGA+TGG 0.591505 4_1:+57152665 Msa0558420:CDS
GCGGCATGTCAAATAAGATG+TGG 0.597175 4_1:+57153201 Msa0558420:CDS
CTTACATTACGCAATCTCTG+AGG 0.597794 4_1:-57153070 None:intergenic
TTGCCACATCCAGTAAATAC+GGG 0.597838 4_1:+57154100 Msa0558420:CDS
AGCTGAGTGATACTGGTCGT+TGG 0.598925 4_1:-57153348 None:intergenic
AGTTGTGCAGAGAGACCTGC+CGG 0.599061 4_1:+57155375 Msa0558420:three_prime_UTR
TAGATGTATTTGTTCTTGAG+GGG 0.601798 4_1:+57152543 Msa0558420:CDS
CTTAAGGCAGCTTTGAGATG+GGG 0.606673 4_1:+57155089 Msa0558420:CDS
CAAGGTATTAGCAGAATGCA+CGG 0.607401 4_1:+57151021 Msa0558420:exon
GTATTAGCAGAATGCACGGT+AGG 0.607790 4_1:+57151025 Msa0558420:exon
ATTTCAAATTCTACTTACAG+AGG 0.608028 4_1:+57154825 Msa0558420:CDS
CCCACCGGCCTTGCATGATG+AGG 0.608643 4_1:+57152943 Msa0558420:CDS
CGGCATGTCAAATAAGATGT+GGG 0.610029 4_1:+57153202 Msa0558420:CDS
CCTCATCATGCAAGGCCGGT+GGG 0.611404 4_1:-57152943 None:intergenic
GAAAGTAGAAGGTGAGCAAG+GGG 0.613508 4_1:+57152445 Msa0558420:CDS
GCCCACAACAGCTTTGCCCG+AGG 0.615891 4_1:-57155057 None:intergenic
TGCAGATCGCCAGACAGAAG+AGG 0.616462 4_1:-57152647 None:intergenic
TGCACGTTATTGAGTATGAT+GGG 0.623578 4_1:+57153966 Msa0558420:CDS
TTGCTCCGTATGTTTAACAT+GGG 0.630977 4_1:+57154924 Msa0558420:CDS
TCTCCAAACCTCATCATGCA+AGG 0.631609 4_1:-57152951 None:intergenic
TGGGAACCCATGAGAGCCTG+AGG 0.631909 4_1:-57154037 None:intergenic
TAATCCGTTATGATCTGTAA+CGG 0.631979 4_1:+57155191 Msa0558420:three_prime_UTR
CGTAGCACGACTTTGAGCAA+GGG 0.641978 4_1:+57155282 Msa0558420:three_prime_UTR
AAGTCTTCGCATGCTCAACA+AGG 0.645387 4_1:-57153229 None:intergenic
AATTGAAAGAAGCATGTGCA+TGG 0.648736 4_1:-57154950 None:intergenic
ACTTTATGTATATTATCCCG+AGG 0.649519 4_1:+57153268 Msa0558420:CDS
CATATTGTGAAAGAACGTGA+AGG 0.655058 4_1:+57152617 Msa0558420:CDS
CGAGGATGCAAGAAATGTGG+GGG 0.655440 4_1:+57153286 Msa0558420:CDS
TGATCATCATGTAGCTAGGG+CGG 0.657688 4_1:+57151053 Msa0558420:CDS
ATGCCACAAACAGTAACACA+CGG 0.658400 4_1:+57154786 Msa0558420:CDS
CCGAGGATGCAAGAAATGTG+GGG 0.658464 4_1:+57153285 Msa0558420:CDS
ATTAGGGTACCCATCTTCGT+GGG 0.661719 4_1:-57154973 None:intergenic
ATTGTAAATTATTGTCATCG+GGG 0.664217 4_1:-57152379 None:intergenic
GCGAAGACTTGTGTTCTCAG+TGG 0.675741 4_1:+57153242 Msa0558420:CDS
ATACAAGAAACACTACCCAC+CGG 0.676079 4_1:+57152928 Msa0558420:CDS
TTCACTGTTAAGGATCATCG+TGG 0.682664 4_1:+57152821 Msa0558420:CDS
GTCCCACCAAGCTTAATGGG+AGG 0.683314 4_1:+57152005 Msa0558420:CDS
AGTTGAAGACTTCTTCCCAG+AGG 0.686584 4_1:+57154848 Msa0558420:CDS
AACATAAATATCATGCCACA+CGG 0.695590 4_1:-57155675 None:intergenic
TGCCACAAACAGTAACACAC+GGG 0.702886 4_1:+57154787 Msa0558420:CDS
GGATGGTGTAGGAACACTGG+GGG 0.712741 4_1:+57152682 Msa0558420:CDS
TCTCTTGTACAGCTGCCGTG+TGG 0.715104 4_1:+57155660 Msa0558420:three_prime_UTR
GGAGTAGGAAGTTCAGATTG+GGG 0.725755 4_1:+57152738 Msa0558420:CDS
GCAGGTTTATGTGGACACGT+TGG 0.727323 4_1:+57153919 Msa0558420:intron
TAGATGACTCTTGATCCTGG+AGG 0.730918 4_1:+57155162 Msa0558420:exon
AGGATGGTGTAGGAACACTG+GGG 0.798727 4_1:+57152681 Msa0558420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTAGGTTTTAATT+CGG + chr4_1:57153418-57153437 Msa0558420:intron 10.0%
!!! TTTATAATTAATGTTATTTC+TGG + chr4_1:57153707-57153726 Msa0558420:intron 10.0%
!!! AGTTTTTATAATTTTGTTTG+AGG + chr4_1:57150991-57151010 Msa0558420:five_prime_UTR 15.0%
!! CTAAAAAAAATAGAATAAAC+AGG - chr4_1:57151380-57151399 None:intergenic 15.0%
!!! AAACAATAAAAGTGATTTTT+TGG - chr4_1:57151403-57151422 None:intergenic 15.0%
!!! AAGTAGCTTTTTTAATAAAA+TGG - chr4_1:57151457-57151476 None:intergenic 15.0%
!!! GCTTAGAAAATTTTATATTT+AGG + chr4_1:57153407-57153426 Msa0558420:intron 15.0%
!! CTAAAAGATATAAACATAAT+TGG + chr4_1:57153558-57153577 Msa0558420:intron 15.0%
!!! TAATACAAAAATGTTTTACA+AGG - chr4_1:57154171-57154190 None:intergenic 15.0%
!! TATTAACTACAAAAGTAAAA+GGG + chr4_1:57154186-57154205 Msa0558420:intron 15.0%
!!! AGAAATAACTTTTCATTTTG+AGG - chr4_1:57151484-57151503 None:intergenic 20.0%
!! AGACTTAGATATAATTGAAT+AGG + chr4_1:57151738-57151757 Msa0558420:intron 20.0%
!! TGTATAATTAAACATGCTAA+GGG - chr4_1:57152044-57152063 None:intergenic 20.0%
!! TTAGCATGTTTAATTATACA+GGG + chr4_1:57152044-57152063 Msa0558420:intron 20.0%
!! AACCTATTCCAAATAAAAAA+TGG + chr4_1:57152168-57152187 Msa0558420:intron 20.0%
!! ACCTATTCCAAATAAAAAAT+GGG + chr4_1:57152169-57152188 Msa0558420:intron 20.0%
!!! GATATTTCCCATTTTTTATT+TGG - chr4_1:57152179-57152198 None:intergenic 20.0%
!!! AATCTATTTTATTTGGTGAT+TGG + chr4_1:57152241-57152260 Msa0558420:intron 20.0%
!! AATTGTAAATTATTGTCATC+GGG - chr4_1:57152383-57152402 None:intergenic 20.0%
!! CAATTGTAAATTATTGTCAT+CGG - chr4_1:57152384-57152403 None:intergenic 20.0%
!!! TTTTTTCTAAATAAAGCCAA+TGG + chr4_1:57153888-57153907 Msa0558420:intron 20.0%
!! TTACAATCAGGATAAAAATT+TGG + chr4_1:57154003-57154022 Msa0558420:CDS 20.0%
!! TATTAAGTTTGAATACTCAT+GGG - chr4_1:57154059-57154078 None:intergenic 20.0%
!! GTATTAACTACAAAAGTAAA+AGG + chr4_1:57154185-57154204 Msa0558420:intron 20.0%
!!! ACTTCGAATAAAACTTTTAT+TGG - chr4_1:57154302-57154321 None:intergenic 20.0%
!!! TTTTAATGACAAGAAAATTG+GGG - chr4_1:57154360-57154379 None:intergenic 20.0%
!!! GTTTTAATGACAAGAAAATT+GGG - chr4_1:57154361-57154380 None:intergenic 20.0%
!!! AGTTTTAATGACAAGAAAAT+TGG - chr4_1:57154362-57154381 None:intergenic 20.0%
!!! TTAACGTGTAAAAGTTTTAA+AGG + chr4_1:57155457-57155476 Msa0558420:three_prime_UTR 20.0%
!! TTTATGTTCTCAATTTGAAT+TGG + chr4_1:57155690-57155709 Msa0558420:three_prime_UTR 20.0%
! TACCTATTAACAACTTTGTT+TGG + chr4_1:57151155-57151174 Msa0558420:intron 25.0%
!! ACCTATTAACAACTTTGTTT+GGG + chr4_1:57151156-57151175 Msa0558420:intron 25.0%
! TAAGAAAATTCACTTCATTG+TGG + chr4_1:57151330-57151349 Msa0558420:intron 25.0%
!! AATTTTATTGTCTTTTAGCC+TGG + chr4_1:57151692-57151711 Msa0558420:intron 25.0%
! CATTCAAACAAAAAATGCTA+AGG + chr4_1:57151776-57151795 Msa0558420:intron 25.0%
! CTGTATAATTAAACATGCTA+AGG - chr4_1:57152045-57152064 None:intergenic 25.0%
! CTTAGCATGTTTAATTATAC+AGG + chr4_1:57152043-57152062 Msa0558420:intron 25.0%
! TAGCATGTTTAATTATACAG+GGG + chr4_1:57152045-57152064 Msa0558420:intron 25.0%
!!! TCCCATTTTTTATTTGGAAT+AGG - chr4_1:57152173-57152192 None:intergenic 25.0%
!! ACACTGCAATCTATTTTATT+TGG + chr4_1:57152234-57152253 Msa0558420:intron 25.0%
! TAATACCCTAATTCAAATTC+AGG + chr4_1:57152333-57152352 Msa0558420:intron 25.0%
! ATTGTAAATTATTGTCATCG+GGG - chr4_1:57152382-57152401 None:intergenic 25.0%
! ATCAACCAAAACAATATGTA+TGG - chr4_1:57152474-57152493 None:intergenic 25.0%
! AAGAACAAATACATCTAGTT+TGG - chr4_1:57152540-57152559 None:intergenic 25.0%
!!! TGTTTTAACGAAATTTCCTT+TGG + chr4_1:57152895-57152914 Msa0558420:intron 25.0%
! TTGTATACTATATAGTCCAA+AGG - chr4_1:57152914-57152933 None:intergenic 25.0%
!!! TTTATTTAGCCTTTTGTGAA+AGG - chr4_1:57153002-57153021 None:intergenic 25.0%
! ATCTAAATTCTTGCTCATTT+AGG + chr4_1:57153094-57153113 Msa0558420:intron 25.0%
! ATCTTTCTTATGTAGATTCT+TGG + chr4_1:57153176-57153195 Msa0558420:intron 25.0%
! TCTTTCTTATGTAGATTCTT+GGG + chr4_1:57153177-57153196 Msa0558420:intron 25.0%
! AATCACATTTATGAATTGAG+CGG + chr4_1:57153317-57153336 Msa0558420:CDS 25.0%
!!! ATTTTGCCTAGTTTTATTCT+TGG + chr4_1:57153625-57153644 Msa0558420:intron 25.0%
!! GTTAGGAGTGTAAATATAAT+AGG - chr4_1:57153675-57153694 None:intergenic 25.0%
! AATATGTGCATAGATAAGAT+AGG + chr4_1:57153732-57153751 Msa0558420:intron 25.0%
!! TAATATGTGCTACTAAGAAA+TGG + chr4_1:57153792-57153811 Msa0558420:intron 25.0%
!!! ATCATCTTTTTATTTCACTG+TGG - chr4_1:57153867-57153886 None:intergenic 25.0%
!! TGAAGAAAGCATATGATAAT+TGG + chr4_1:57153942-57153961 Msa0558420:CDS 25.0%
! GTATTAAGTTTGAATACTCA+TGG - chr4_1:57154060-57154079 None:intergenic 25.0%
! GTCATTAAAACTACTAAAGT+TGG + chr4_1:57154370-57154389 Msa0558420:intron 25.0%
!!! AGTTTTTCGCCTTTTAAAAA+TGG + chr4_1:57154552-57154571 Msa0558420:intron 25.0%
! AAAATGCGTTATCATCAAAT+TGG - chr4_1:57154692-57154711 None:intergenic 25.0%
! AACTTCAAAGAAGTGAAAAT+GGG + chr4_1:57154751-57154770 Msa0558420:CDS 25.0%
! ATTTCAAATTCTACTTACAG+AGG + chr4_1:57154825-57154844 Msa0558420:CDS 25.0%
!! AACTTTTACACGTTAATGAT+GGG - chr4_1:57155453-57155472 None:intergenic 25.0%
!! AAACTTTTACACGTTAATGA+TGG - chr4_1:57155454-57155473 None:intergenic 25.0%
!!! AAATCTTAACTACTTTTGCT+AGG + chr4_1:57155567-57155586 Msa0558420:three_prime_UTR 25.0%
ACCCAAACAAAGTTGTTAAT+AGG - chr4_1:57151160-57151179 None:intergenic 30.0%
TACCTTAAGGCTTAAAGTAA+GGG - chr4_1:57151652-57151671 None:intergenic 30.0%
ATACCTTAAGGCTTAAAGTA+AGG - chr4_1:57151653-57151672 None:intergenic 30.0%
!!! GCATTTTTTGTTTGAATGTG+TGG - chr4_1:57151774-57151793 None:intergenic 30.0%
AAAATGCTAAGGTTTATGAG+AGG + chr4_1:57151787-57151806 Msa0558420:intron 30.0%
TGAAGTGAATCTATGTTACT+TGG + chr4_1:57151887-57151906 Msa0558420:intron 30.0%
GCTTACTTGGCAAAAAATTT+GGG + chr4_1:57152106-57152125 Msa0558420:intron 30.0%
!! TCTAGGGCTAATCTTAATTT+TGG + chr4_1:57152142-57152161 Msa0558420:intron 30.0%
GAAGACCTGAATTTGAATTA+GGG - chr4_1:57152341-57152360 None:intergenic 30.0%
AGAAGACCTGAATTTGAATT+AGG - chr4_1:57152342-57152361 None:intergenic 30.0%
ACTAGATGTATTTGTTCTTG+AGG + chr4_1:57152541-57152560 Msa0558420:CDS 30.0%
CTAGATGTATTTGTTCTTGA+GGG + chr4_1:57152542-57152561 Msa0558420:CDS 30.0%
TAGATGTATTTGTTCTTGAG+GGG + chr4_1:57152543-57152562 Msa0558420:CDS 30.0%
ATAATGAGGACGATGAAAAT+TGG + chr4_1:57152573-57152592 Msa0558420:CDS 30.0%
CGATCTGCAAGTTATATTAA+AGG + chr4_1:57152661-57152680 Msa0558420:CDS 30.0%
CTGCAAGTTATATTAAAGGA+TGG + chr4_1:57152665-57152684 Msa0558420:CDS 30.0%
GTTATATTAAAGGATGGTGT+AGG + chr4_1:57152671-57152690 Msa0558420:CDS 30.0%
ACTTTATGTATATTATCCCG+AGG + chr4_1:57153268-57153287 Msa0558420:CDS 30.0%
ATAACCCAACTTTCATCATA+TGG - chr4_1:57153493-57153512 None:intergenic 30.0%
AAGAAATGGTAGGTAATCAA+TGG + chr4_1:57153806-57153825 Msa0558420:intron 30.0%
GTCTCTACTAAATTACAATC+AGG + chr4_1:57153991-57154010 Msa0558420:CDS 30.0%
AAGTTCGATTTCACTAAAAG+TGG + chr4_1:57154318-57154337 Msa0558420:intron 30.0%
AAACTACTAAAGTTGGCAAA+TGG + chr4_1:57154377-57154396 Msa0558420:intron 30.0%
TAAAGTTGGCAAATGGTATT+TGG + chr4_1:57154384-57154403 Msa0558420:intron 30.0%
TTCTGATGACATTTCATCAT+GGG - chr4_1:57154458-57154477 None:intergenic 30.0%
ATTAGTATTCTGTGATTGCA+TGG - chr4_1:57154655-57154674 None:intergenic 30.0%
CAACTTCAAAGAAGTGAAAA+TGG + chr4_1:57154750-57154769 Msa0558420:CDS 30.0%
! GTAAGTAGAATTTGAAATGC+TGG - chr4_1:57154823-57154842 None:intergenic 30.0%
TAATACGTATTTCTTCCTCT+GGG - chr4_1:57154866-57154885 None:intergenic 30.0%
TAATCCGTTATGATCTGTAA+CGG + chr4_1:57155191-57155210 Msa0558420:three_prime_UTR 30.0%
ATTACCGTTACAGATCATAA+CGG - chr4_1:57155198-57155217 None:intergenic 30.0%
! ATCTGTAACGGTAATTTTTC+TGG + chr4_1:57155203-57155222 Msa0558420:three_prime_UTR 30.0%
!!! TAACGGTAATTTTTCTGGTT+AGG + chr4_1:57155208-57155227 Msa0558420:three_prime_UTR 30.0%
!!! AACGGTAATTTTTCTGGTTA+GGG + chr4_1:57155209-57155228 Msa0558420:three_prime_UTR 30.0%
! TAATGTTGAGAAATTAGCCT+TGG - chr4_1:57155238-57155257 None:intergenic 30.0%
GCACAACTGATTAAGAATTA+TGG - chr4_1:57155363-57155382 None:intergenic 30.0%
!! TTTCCTGAGATTTCAAGTTT+AGG - chr4_1:57155539-57155558 None:intergenic 30.0%
AACATAAATATCATGCCACA+CGG - chr4_1:57155678-57155697 None:intergenic 30.0%
! AGTACAGTTGGTGTGATTAT+TGG - chr4_1:57150872-57150891 None:intergenic 35.0%
GCGAAAAAATGTAGTACAGT+TGG - chr4_1:57150884-57150903 None:intergenic 35.0%
TTTGTTTGAGGAACCAAACA+AGG + chr4_1:57151003-57151022 Msa0558420:five_prime_UTR 35.0%
CATTCTGCTAATACCTTGTT+TGG - chr4_1:57151019-57151038 None:intergenic 35.0%
TTAATTAACCTAGCCAAAGC+AGG - chr4_1:57151135-57151154 None:intergenic 35.0%
! TTATTGTCTTTTAGCCTGGT+AGG + chr4_1:57151696-57151715 Msa0558420:intron 35.0%
!! TTTCTTGCTTGCTGTATAAC+AGG + chr4_1:57151946-57151965 Msa0558420:intron 35.0%
ATAACAGGTTAGTGAAGAAG+TGG + chr4_1:57151961-57151980 Msa0558420:intron 35.0%
ATTATACCTCCCATTAAGCT+TGG - chr4_1:57152014-57152033 None:intergenic 35.0%
GGCTTACTTGGCAAAAAATT+TGG + chr4_1:57152105-57152124 Msa0558420:intron 35.0%
ACTTGGCAAAAAATTTGGGT+TGG + chr4_1:57152110-57152129 Msa0558420:intron 35.0%
! TGGGTTGGAATTAAAAGTCT+AGG + chr4_1:57152125-57152144 Msa0558420:intron 35.0%
GGGTTGGAATTAAAAGTCTA+GGG + chr4_1:57152126-57152145 Msa0558420:intron 35.0%
AGATGTATTTGTTCTTGAGG+GGG + chr4_1:57152544-57152563 Msa0558420:CDS 35.0%
CATATTGTGAAAGAACGTGA+AGG + chr4_1:57152617-57152636 Msa0558420:CDS 35.0%
TGAAAGAACGTGAAGGAAAA+AGG + chr4_1:57152624-57152643 Msa0558420:CDS 35.0%
AACAGTGAAAGCTTCTGATT+TGG - chr4_1:57152810-57152829 None:intergenic 35.0%
ATCAGAAGCTTTCACTGTTA+AGG + chr4_1:57152811-57152830 Msa0558420:CDS 35.0%
CACAAAAGGCTAAATAAAGC+AGG + chr4_1:57153004-57153023 Msa0558420:CDS 35.0%
TTACATTACGCAATCTCTGA+GGG - chr4_1:57153072-57153091 None:intergenic 35.0%
!!! GGTTTTAATTCGGACCATAT+TGG + chr4_1:57153428-57153447 Msa0558420:intron 35.0%
ATGAAAGAAAGACGCCAATA+TGG - chr4_1:57153445-57153464 None:intergenic 35.0%
TGAGACCATATGATGAAAGT+TGG + chr4_1:57153485-57153504 Msa0558420:intron 35.0%
GAGACCATATGATGAAAGTT+GGG + chr4_1:57153486-57153505 Msa0558420:intron 35.0%
TTGTGGTTACAAGTACTTCA+TGG + chr4_1:57153527-57153546 Msa0558420:intron 35.0%
ATACAACAATGTTCAGTGCT+TGG + chr4_1:57153594-57153613 Msa0558420:intron 35.0%
CAGAGTCCAAGAATAAAACT+AGG - chr4_1:57153634-57153653 None:intergenic 35.0%
ATAAAACCCTGTGCAAAGTT+AGG - chr4_1:57153692-57153711 None:intergenic 35.0%
! ATGTGCTACTAAGAAATGGT+AGG + chr4_1:57153796-57153815 Msa0558420:intron 35.0%
AAACCTGCAAAAGAAACCAT+TGG - chr4_1:57153907-57153926 None:intergenic 35.0%
! GTTTCTTTTGCAGGTTTATG+TGG + chr4_1:57153910-57153929 Msa0558420:intron 35.0%
ATGCACGTTATTGAGTATGA+TGG + chr4_1:57153965-57153984 Msa0558420:CDS 35.0%
TGCACGTTATTGAGTATGAT+GGG + chr4_1:57153966-57153985 Msa0558420:CDS 35.0%
TTTGCCACATCCAGTAAATA+CGG + chr4_1:57154099-57154118 Msa0558420:CDS 35.0%
! AAAGGGTTCTTCAGTTGTTT+TGG + chr4_1:57154203-57154222 Msa0558420:intron 35.0%
CTTCTGATGACATTTCATCA+TGG - chr4_1:57154459-57154478 None:intergenic 35.0%
! AAACAGTCTATGGATTGACA+TGG - chr4_1:57154524-57154543 None:intergenic 35.0%
CTATTGAGTGAAACAGTCTA+TGG - chr4_1:57154534-57154553 None:intergenic 35.0%
!! GTGAGCTCACCATTTTTAAA+AGG - chr4_1:57154564-57154583 None:intergenic 35.0%
CTAATACGTATTTCTTCCTC+TGG - chr4_1:57154867-57154886 None:intergenic 35.0%
TTTGCTCCGTATGTTTAACA+TGG + chr4_1:57154923-57154942 Msa0558420:CDS 35.0%
TTGCTCCGTATGTTTAACAT+GGG + chr4_1:57154924-57154943 Msa0558420:CDS 35.0%
! AATTGAAAGAAGCATGTGCA+TGG - chr4_1:57154953-57154972 None:intergenic 35.0%
!! TGAGATGGGGTATTTTTGTT+AGG + chr4_1:57155102-57155121 Msa0558420:CDS 35.0%
!! GGGTATTTTTGTTAGGAAGA+AGG + chr4_1:57155109-57155128 Msa0558420:CDS 35.0%
AATTAGATGACTCTTGATCC+TGG + chr4_1:57155159-57155178 Msa0558420:exon 35.0%
!! GAAACCTGGATTGGTTTATT+TGG + chr4_1:57155308-57155327 Msa0558420:three_prime_UTR 35.0%
!! TTTACACGTTAATGATGGGT+TGG - chr4_1:57155449-57155468 None:intergenic 35.0%
CTTCAAGCAAAAATTGCCTT+CGG - chr4_1:57155506-57155525 None:intergenic 35.0%
! AGGCAATTTTTGCTTGAAGT+TGG + chr4_1:57155507-57155526 Msa0558420:three_prime_UTR 35.0%
! ATTTTTGCTTGAAGTTGGCA+AGG + chr4_1:57155512-57155531 Msa0558420:three_prime_UTR 35.0%
CGTCAATTGCTTGATTGAAT+AGG + chr4_1:57155616-57155635 Msa0558420:three_prime_UTR 35.0%
! CAGTTGGTGTGATTATTGGT+TGG - chr4_1:57150868-57150887 None:intergenic 40.0%
TGTTGTGTTGTGTGTGTAGT+AGG - chr4_1:57150963-57150982 None:intergenic 40.0%
! CAAGGTATTAGCAGAATGCA+CGG + chr4_1:57151021-57151040 Msa0558420:exon 40.0%
ACGTTGATCATCATGTAGCT+AGG + chr4_1:57151049-57151068 Msa0558420:CDS 40.0%
CGTTGATCATCATGTAGCTA+GGG + chr4_1:57151050-57151069 Msa0558420:CDS 40.0%
CTGCATACTATCCACTTTCA+GGG - chr4_1:57151270-57151289 None:intergenic 40.0%
TCTGCATACTATCCACTTTC+AGG - chr4_1:57151271-57151290 None:intergenic 40.0%
CTTACAACTCTGCGTAGAAT+AGG - chr4_1:57151314-57151333 None:intergenic 40.0%
CACCCTTACTTTAAGCCTTA+AGG + chr4_1:57151647-57151666 Msa0558420:intron 40.0%
CAGATGCAAGTGATACCTTA+AGG - chr4_1:57151665-57151684 None:intergenic 40.0%
AAGGTTTATGAGAGGCTTTC+TGG + chr4_1:57151795-57151814 Msa0558420:intron 40.0%
!! ACTCTGAGATACAGACTTTC+AGG - chr4_1:57151831-57151850 None:intergenic 40.0%
CAAAATGAGTCAGGGTAGAT+TGG + chr4_1:57152071-57152090 Msa0558420:intron 40.0%
!! GGTAGATTGGTTTGTCTTGT+CGG + chr4_1:57152084-57152103 Msa0558420:intron 40.0%
CGTTAGTCAACGTGTGAATT+TGG + chr4_1:57152200-57152219 Msa0558420:intron 40.0%
TACTTTCCCGCCAGTAAAAA+GGG - chr4_1:57152432-57152451 None:intergenic 40.0%
! GGCAGCCATACATATTGTTT+TGG + chr4_1:57152466-57152485 Msa0558420:CDS 40.0%
!!! GTTTTGGTTGATGCAAACAC+AGG + chr4_1:57152482-57152501 Msa0558420:CDS 40.0%
TGAGGGGGATTTCAATAATG+AGG + chr4_1:57152559-57152578 Msa0558420:CDS 40.0%
CATTTACTGACAACTCCAGT+TGG + chr4_1:57152711-57152730 Msa0558420:CDS 40.0%
AAGGAGTAGGAAGTTCAGAT+TGG + chr4_1:57152736-57152755 Msa0558420:CDS 40.0%
AGGAGTAGGAAGTTCAGATT+GGG + chr4_1:57152737-57152756 Msa0558420:CDS 40.0%
! GTTTCCTCAGGTTTTTGTGA+TGG + chr4_1:57152767-57152786 Msa0558420:CDS 40.0%
CATTCCATCACAAAAACCTG+AGG - chr4_1:57152774-57152793 None:intergenic 40.0%
TTCACTGTTAAGGATCATCG+TGG + chr4_1:57152821-57152840 Msa0558420:CDS 40.0%
ATACAAGAAACACTACCCAC+CGG + chr4_1:57152928-57152947 Msa0558420:CDS 40.0%
AGGATGGTTCCTTTCACAAA+AGG + chr4_1:57152990-57153009 Msa0558420:CDS 40.0%
GGTCTCTGATAACAAGTCTT+AGG - chr4_1:57153051-57153070 None:intergenic 40.0%
CTTACATTACGCAATCTCTG+AGG - chr4_1:57153073-57153092 None:intergenic 40.0%
CTTATGTAGATTCTTGGGAG+CGG + chr4_1:57153182-57153201 Msa0558420:intron 40.0%
CGGCATGTCAAATAAGATGT+GGG + chr4_1:57153202-57153221 Msa0558420:CDS 40.0%
! TTCTCTCTCTGAGAGTCAAA+AGG + chr4_1:57153373-57153392 Msa0558420:CDS 40.0%
ATCATATGGTCTCAGAAGTC+AGG - chr4_1:57153479-57153498 None:intergenic 40.0%
TATTCTTGGACTCTGTCTTG+TGG + chr4_1:57153639-57153658 Msa0558420:intron 40.0%
TTACACTCCTAACTTTGCAC+AGG + chr4_1:57153682-57153701 Msa0558420:intron 40.0%
TACACTCCTAACTTTGCACA+GGG + chr4_1:57153683-57153702 Msa0558420:intron 40.0%
! AAGCCAATGGTTTCTTTTGC+AGG + chr4_1:57153901-57153920 Msa0558420:intron 40.0%
TTACTGGATGTGGCAAACTA+TGG - chr4_1:57154096-57154115 None:intergenic 40.0%
TTGCCACATCCAGTAAATAC+GGG + chr4_1:57154100-57154119 Msa0558420:CDS 40.0%
GAGTGTATTGAACAAAGCGA+GGG - chr4_1:57154275-57154294 None:intergenic 40.0%
TGAGTGTATTGAACAAAGCG+AGG - chr4_1:57154276-57154295 None:intergenic 40.0%
ATGACAAGAAAATTGGGGCA+GGG - chr4_1:57154355-57154374 None:intergenic 40.0%
AATGACAAGAAAATTGGGGC+AGG - chr4_1:57154356-57154375 None:intergenic 40.0%
! GCAAATGGTATTTGGAACAC+TGG + chr4_1:57154392-57154411 Msa0558420:intron 40.0%
CTGATTACGTATATGTCTGC+AGG + chr4_1:57154600-57154619 Msa0558420:intron 40.0%
ATGTCTGCAGGTTATCATGA+TGG + chr4_1:57154612-57154631 Msa0558420:intron 40.0%
!! TCTTTGAAGTTGAGCTTGGT+GGG - chr4_1:57154742-57154761 None:intergenic 40.0%
!! TTCTTTGAAGTTGAGCTTGG+TGG - chr4_1:57154743-57154762 None:intergenic 40.0%
!! CACTTCTTTGAAGTTGAGCT+TGG - chr4_1:57154746-57154765 None:intergenic 40.0%
AGTGAAAATGGGATGATGCT+TGG + chr4_1:57154762-57154781 Msa0558420:CDS 40.0%
ATGCCACAAACAGTAACACA+CGG + chr4_1:57154786-57154805 Msa0558420:CDS 40.0%
! AATTTGAAATGCTGGCAGTC+TGG - chr4_1:57154815-57154834 None:intergenic 40.0%
GGCTTCCCATGTTAAACATA+CGG - chr4_1:57154932-57154951 None:intergenic 40.0%
TCTTTCAATTCCCACGAAGA+TGG + chr4_1:57154963-57154982 Msa0558420:CDS 40.0%
CTTTCAATTCCCACGAAGAT+GGG + chr4_1:57154964-57154983 Msa0558420:CDS 40.0%
!! GCATGTATGCAGATGGATTA+GGG - chr4_1:57154992-57155011 None:intergenic 40.0%
! TTGTAGCTCATGTTGTTTGC+AGG - chr4_1:57155014-57155033 None:intergenic 40.0%
AGCACCAAATAAACCAATCC+AGG - chr4_1:57155315-57155334 None:intergenic 40.0%
! GCTTGAAAGATCGCATGTTT+TGG + chr4_1:57155479-57155498 Msa0558420:three_prime_UTR 40.0%
GGTCCTAAACTTGAAATCTC+AGG + chr4_1:57155533-57155552 Msa0558420:three_prime_UTR 40.0%
GAATTGGTGTGATGACTACT+TGG + chr4_1:57155706-57155725 Msa0558420:three_prime_UTR 40.0%
GTATTAGCAGAATGCACGGT+AGG + chr4_1:57151025-57151044 Msa0558420:exon 45.0%
TGATCATCATGTAGCTAGGG+CGG + chr4_1:57151053-57151072 Msa0558420:CDS 45.0%
GATTCCACTTCTGCTGAAGA+TGG + chr4_1:57151090-57151109 Msa0558420:CDS 45.0%
GATTGTTGAAGCCCTGAAAG+TGG + chr4_1:57151256-57151275 Msa0558420:CDS 45.0%
GCAGAAACTGTGTTCATCAC+TGG + chr4_1:57151286-57151305 Msa0558420:CDS 45.0%
! TCTTTTAGCCTGGTAGGTCT+TGG + chr4_1:57151702-57151721 Msa0558420:intron 45.0%
TAGGTCCCACCAAGCTTAAT+GGG + chr4_1:57152002-57152021 Msa0558420:CDS 45.0%
TACCTCCCATTAAGCTTGGT+GGG - chr4_1:57152010-57152029 None:intergenic 45.0%
ATACCTCCCATTAAGCTTGG+TGG - chr4_1:57152011-57152030 None:intergenic 45.0%
!! AGGGGTGTCAAAATGAGTCA+GGG + chr4_1:57152063-57152082 Msa0558420:intron 45.0%
!! GTTTGTCTTGTCGGCTTACT+TGG + chr4_1:57152093-57152112 Msa0558420:intron 45.0%
TCTTCTCCAAAGCGCATAGA+AGG + chr4_1:57152356-57152375 Msa0558420:CDS 45.0%
AAAAAGGGGAAGGGATAGTC+TGG - chr4_1:57152417-57152436 None:intergenic 45.0%
! CTATCCCTTCCCCTTTTTAC+TGG + chr4_1:57152419-57152438 Msa0558420:CDS 45.0%
ACTTTCCCGCCAGTAAAAAG+GGG - chr4_1:57152431-57152450 None:intergenic 45.0%
CTACTTTCCCGCCAGTAAAA+AGG - chr4_1:57152433-57152452 None:intergenic 45.0%
TTTACTGGCGGGAAAGTAGA+AGG + chr4_1:57152434-57152453 Msa0558420:CDS 45.0%
GGAAAGTAGAAGGTGAGCAA+GGG + chr4_1:57152444-57152463 Msa0558420:CDS 45.0%
GAAAGTAGAAGGTGAGCAAG+GGG + chr4_1:57152445-57152464 Msa0558420:CDS 45.0%
CTAGTTTGGCACATGACTCT+GGG - chr4_1:57152526-57152545 None:intergenic 45.0%
! TCTAGTTTGGCACATGACTC+TGG - chr4_1:57152527-57152546 None:intergenic 45.0%
AAAGGATGGTGTAGGAACAC+TGG + chr4_1:57152679-57152698 Msa0558420:CDS 45.0%
AAGGATGGTGTAGGAACACT+GGG + chr4_1:57152680-57152699 Msa0558420:CDS 45.0%
CTGACAACTCCAGTTGGATA+AGG + chr4_1:57152717-57152736 Msa0558420:CDS 45.0%
ACTCCAGTTGGATAAGGAGT+AGG + chr4_1:57152723-57152742 Msa0558420:CDS 45.0%
CTTCCTACTCCTTATCCAAC+TGG - chr4_1:57152729-57152748 None:intergenic 45.0%
GGAGTAGGAAGTTCAGATTG+GGG + chr4_1:57152738-57152757 Msa0558420:CDS 45.0%
TCTCCAAACCTCATCATGCA+AGG - chr4_1:57152954-57152973 None:intergenic 45.0%
GTTTGGAGACTGGAGAAGAT+TGG + chr4_1:57152965-57152984 Msa0558420:CDS 45.0%
GAGACTGGAGAAGATTGGTA+AGG + chr4_1:57152970-57152989 Msa0558420:CDS 45.0%
CTGGAGAAGATTGGTAAGGA+TGG + chr4_1:57152974-57152993 Msa0558420:CDS 45.0%
ACATCTCACCTCCTAAGTGA+GGG - chr4_1:57153138-57153157 None:intergenic 45.0%
AACATCTCACCTCCTAAGTG+AGG - chr4_1:57153139-57153158 None:intergenic 45.0%
GCGGCATGTCAAATAAGATG+TGG + chr4_1:57153201-57153220 Msa0558420:CDS 45.0%
AAGTCTTCGCATGCTCAACA+AGG - chr4_1:57153232-57153251 None:intergenic 45.0%
GAGAATCAGCTGAGTGATAC+TGG - chr4_1:57153358-57153377 None:intergenic 45.0%
GTAACCACAACCAGATCTCA+GGG - chr4_1:57153517-57153536 None:intergenic 45.0%
TGTAACCACAACCAGATCTC+AGG - chr4_1:57153518-57153537 None:intergenic 45.0%
AAATACGGGCCAACCTTCAA+TGG + chr4_1:57154114-57154133 Msa0558420:CDS 45.0%
CTCCTGTATCCATTGAAGGT+TGG - chr4_1:57154126-57154145 None:intergenic 45.0%
GTTGCTCCTGTATCCATTGA+AGG - chr4_1:57154130-57154149 None:intergenic 45.0%
ATGGATACAGGAGCAACAGT+TGG + chr4_1:57154133-57154152 Msa0558420:CDS 45.0%
TGAACAAAGCGAGGGAAAAG+TGG - chr4_1:57154267-57154286 None:intergenic 45.0%
TGACAAGAAAATTGGGGCAG+GGG - chr4_1:57154354-57154373 None:intergenic 45.0%
GAAGAGAATAACAGTGCCAC+CGG + chr4_1:57154475-57154494 Msa0558420:intron 45.0%
GATTGACATGGATTTCGAGC+AGG - chr4_1:57154512-57154531 None:intergenic 45.0%
!! CTTTGAAGTTGAGCTTGGTG+GGG - chr4_1:57154741-57154760 None:intergenic 45.0%
TGCCACAAACAGTAACACAC+GGG + chr4_1:57154787-57154806 Msa0558420:CDS 45.0%
! AACCCGTGTGTTACTGTTTG+TGG - chr4_1:57154792-57154811 None:intergenic 45.0%
AGTTGAAGACTTCTTCCCAG+AGG + chr4_1:57154848-57154867 Msa0558420:CDS 45.0%
! ATTAGGGTACCCATCTTCGT+GGG - chr4_1:57154976-57154995 None:intergenic 45.0%
! GGCATGTATGCAGATGGATT+AGG - chr4_1:57154993-57155012 None:intergenic 45.0%
TTTGCAGGCATGTATGCAGA+TGG - chr4_1:57154999-57155018 None:intergenic 45.0%
CGATGAGCCAAAAAGTTCCT+CGG + chr4_1:57155040-57155059 Msa0558420:CDS 45.0%
GATGAGCCAAAAAGTTCCTC+GGG + chr4_1:57155041-57155060 Msa0558420:CDS 45.0%
!! AGCTTAAGGCAGCTTTGAGA+TGG + chr4_1:57155087-57155106 Msa0558420:CDS 45.0%
!! GCTTAAGGCAGCTTTGAGAT+GGG + chr4_1:57155088-57155107 Msa0558420:CDS 45.0%
!! CTTAAGGCAGCTTTGAGATG+GGG + chr4_1:57155089-57155108 Msa0558420:CDS 45.0%
TAGATGACTCTTGATCCTGG+AGG + chr4_1:57155162-57155181 Msa0558420:exon 45.0%
!! AACGGATTAGCAATTCCTCC+AGG - chr4_1:57155180-57155199 None:intergenic 45.0%
!!! TTTTCTGGTTAGGGCATCCA+AGG + chr4_1:57155218-57155237 Msa0558420:three_prime_UTR 45.0%
GCTACGAAGTTTGAGCAAGA+TGG - chr4_1:57155268-57155287 None:intergenic 45.0%
TAGGGCGGAGAAGAGAAGTT+TGG + chr4_1:57151068-57151087 Msa0558420:CDS 50.0%
CTGACCATCTTCAGCAGAAG+TGG - chr4_1:57151097-57151116 None:intergenic 50.0%
CTGAAGATGGTCAGCCTGAT+CGG + chr4_1:57151103-57151122 Msa0558420:CDS 50.0%
AAAGCAGGTCGTTTCCGATC+AGG - chr4_1:57151120-57151139 None:intergenic 50.0%
TGATCGGAAACGACCTGCTT+TGG + chr4_1:57151119-57151138 Msa0558420:CDS 50.0%
AGTTGAAGCCAAGACCTACC+AGG - chr4_1:57151713-57151732 None:intergenic 50.0%
TGAAGAAGTGGAGCGTGCTT+TGG + chr4_1:57151973-57151992 Msa0558420:CDS 50.0%
GAGCGTGCTTTGGCAAAACT+AGG + chr4_1:57151983-57152002 Msa0558420:CDS 50.0%
CTAGGTCCCACCAAGCTTAA+TGG + chr4_1:57152001-57152020 Msa0558420:CDS 50.0%
!! CAGGGGTGTCAAAATGAGTC+AGG + chr4_1:57152062-57152081 Msa0558420:intron 50.0%
! TCCCTTCCCCTTTTTACTGG+CGG + chr4_1:57152422-57152441 Msa0558420:CDS 50.0%
GGGAAAGTAGAAGGTGAGCA+AGG + chr4_1:57152443-57152462 Msa0558420:CDS 50.0%
ACAGGCCATATTGTCACGTC+AGG + chr4_1:57152500-57152519 Msa0558420:CDS 50.0%
GGAAAAAGGCCTCTTCTGTC+TGG + chr4_1:57152638-57152657 Msa0558420:CDS 50.0%
AGGATGGTGTAGGAACACTG+GGG + chr4_1:57152681-57152700 Msa0558420:CDS 50.0%
TTGGGGCTGAAAGTTTCCTC+AGG + chr4_1:57152755-57152774 Msa0558420:CDS 50.0%
CAAACCTCATCATGCAAGGC+CGG - chr4_1:57152950-57152969 None:intergenic 50.0%
GCATGATGAGGTTTGGAGAC+TGG + chr4_1:57152955-57152974 Msa0558420:CDS 50.0%
!! TGTCGACTCTTCCCTCACTT+AGG + chr4_1:57153124-57153143 Msa0558420:intron 50.0%
GCGAAGACTTGTGTTCTCAG+TGG + chr4_1:57153242-57153261 Msa0558420:CDS 50.0%
TCCCGAGGATGCAAGAAATG+TGG + chr4_1:57153283-57153302 Msa0558420:CDS 50.0%
CCCACATTTCTTGCATCCTC+GGG - chr4_1:57153287-57153306 None:intergenic 50.0%
CCCGAGGATGCAAGAAATGT+GGG + chr4_1:57153284-57153303 Msa0558420:CDS 50.0%
CCCCACATTTCTTGCATCCT+CGG - chr4_1:57153288-57153307 None:intergenic 50.0%
CCGAGGATGCAAGAAATGTG+GGG + chr4_1:57153285-57153304 Msa0558420:CDS 50.0%
CGAGGATGCAAGAAATGTGG+GGG + chr4_1:57153286-57153305 Msa0558420:CDS 50.0%
AGCTGAGTGATACTGGTCGT+TGG - chr4_1:57153351-57153370 None:intergenic 50.0%
TTGGGTTATGCCCTGAGATC+TGG + chr4_1:57153504-57153523 Msa0558420:intron 50.0%
TATGCCCTGAGATCTGGTTG+TGG + chr4_1:57153510-57153529 Msa0558420:intron 50.0%
GCAGGTTTATGTGGACACGT+TGG + chr4_1:57153919-57153938 Msa0558420:intron 50.0%
! TTTGGAACCAGCTCATCCTC+AGG + chr4_1:57154021-57154040 Msa0558420:CDS 50.0%
TGGCCCGTATTTACTGGATG+TGG - chr4_1:57154106-57154125 None:intergenic 50.0%
! GAAGGTTGGCCCGTATTTAC+TGG - chr4_1:57154112-57154131 None:intergenic 50.0%
GGCCAACCTTCAATGGATAC+AGG + chr4_1:57154121-57154140 Msa0558420:CDS 50.0%
GATACAGGAGCAACAGTTGG+AGG + chr4_1:57154136-57154155 Msa0558420:CDS 50.0%
CGAGCAGGTCACTATTTGTC+CGG - chr4_1:57154497-57154516 None:intergenic 50.0%
CTGTGATTGCATGGAGAAGC+TGG - chr4_1:57154646-57154665 None:intergenic 50.0%
! GATTAGGGTACCCATCTTCG+TGG - chr4_1:57154977-57154996 None:intergenic 50.0%
! GCTTTGCCCGAGGAACTTTT+TGG - chr4_1:57155050-57155069 None:intergenic 50.0%
TCGTAGCACGACTTTGAGCA+AGG + chr4_1:57155281-57155300 Msa0558420:three_prime_UTR 50.0%
CGTAGCACGACTTTGAGCAA+GGG + chr4_1:57155282-57155301 Msa0558420:three_prime_UTR 50.0%
! TTGAGCAAGGGCATGAAACC+TGG + chr4_1:57155294-57155313 Msa0558420:three_prime_UTR 50.0%
! CAAGGGCATGAAACCTGGAT+TGG + chr4_1:57155299-57155318 Msa0558420:three_prime_UTR 50.0%
GCAGATCCATATTCCTGCAC+CGG - chr4_1:57155397-57155416 None:intergenic 50.0%
!! GATCGCATGTTTTGGACCGA+AGG + chr4_1:57155487-57155506 Msa0558420:three_prime_UTR 50.0%
GGAAACGACCTGCTTTGGCT+AGG + chr4_1:57151124-57151143 Msa0558420:CDS 55.0%
GTCCCACCAAGCTTAATGGG+AGG + chr4_1:57152005-57152024 Msa0558420:CDS 55.0%
CCCGCCAGTAAAAAGGGGAA+GGG - chr4_1:57152426-57152445 None:intergenic 55.0%
! CCCTTCCCCTTTTTACTGGC+GGG + chr4_1:57152423-57152442 Msa0558420:CDS 55.0%
TCCCGCCAGTAAAAAGGGGA+AGG - chr4_1:57152427-57152446 None:intergenic 55.0%
CTGGGCCTGACGTGACAATA+TGG - chr4_1:57152508-57152527 None:intergenic 55.0%
TGCAGATCGCCAGACAGAAG+AGG - chr4_1:57152650-57152669 None:intergenic 55.0%
GGATGGTGTAGGAACACTGG+GGG + chr4_1:57152682-57152701 Msa0558420:CDS 55.0%
CGGCCTTGCATGATGAGGTT+TGG + chr4_1:57152948-57152967 Msa0558420:CDS 55.0%
CGACTCTTCCCTCACTTAGG+AGG + chr4_1:57153127-57153146 Msa0558420:intron 55.0%
ATGAGAGCCTGAGGATGAGC+TGG - chr4_1:57154031-57154050 None:intergenic 55.0%
AGCTCATCCTCAGGCTCTCA+TGG + chr4_1:57154030-57154049 Msa0558420:CDS 55.0%
GCTCATCCTCAGGCTCTCAT+GGG + chr4_1:57154031-57154050 Msa0558420:CDS 55.0%
CAAGAAAATTGGGGCAGGGG+TGG - chr4_1:57154351-57154370 None:intergenic 55.0%
GCAGGTCACTATTTGTCCGG+TGG - chr4_1:57154494-57154513 None:intergenic 55.0%
TTCCTCGGGCAAAGCTGTTG+TGG + chr4_1:57155055-57155074 Msa0558420:CDS 55.0%
TCCTCGGGCAAAGCTGTTGT+GGG + chr4_1:57155056-57155075 Msa0558420:CDS 55.0%
!! TGTGGGCTGGCTCAAGCTTA+AGG + chr4_1:57155073-57155092 Msa0558420:CDS 55.0%
GGAAGAAGGCTGCTGACAGA+CGG + chr4_1:57155123-57155142 Msa0558420:CDS 55.0%
GAAGAAGGCTGCTGACAGAC+GGG + chr4_1:57155124-57155143 Msa0558420:CDS 55.0%
AGTTGTGCAGAGAGACCTGC+CGG + chr4_1:57155375-57155394 Msa0558420:three_prime_UTR 55.0%
! ATCCATATTCCTGCACCGGC+AGG - chr4_1:57155393-57155412 None:intergenic 55.0%
TCTCTTGTACAGCTGCCGTG+TGG + chr4_1:57155660-57155679 Msa0558420:three_prime_UTR 55.0%
TCGGGGCCTTCTATGCGCTT+TGG - chr4_1:57152365-57152384 None:intergenic 60.0%
CCTCATCATGCAAGGCCGGT+GGG - chr4_1:57152946-57152965 None:intergenic 60.0%
ACCTCATCATGCAAGGCCGG+TGG - chr4_1:57152947-57152966 None:intergenic 60.0%
TGGGAACCCATGAGAGCCTG+AGG - chr4_1:57154040-57154059 None:intergenic 60.0%
GGTGGGGAACACTCATCAGC+TGG - chr4_1:57154725-57154744 None:intergenic 60.0%
GACCTGCCGGTGCAGGAATA+TGG + chr4_1:57155388-57155407 Msa0558420:three_prime_UTR 60.0%
CCCACCGGCCTTGCATGATG+AGG + chr4_1:57152943-57152962 Msa0558420:CDS 65.0%
GCCCACAACAGCTTTGCCCG+AGG - chr4_1:57155060-57155079 None:intergenic 65.0%
CGGGCAAAGCTGTTGTGGGC+TGG + chr4_1:57155060-57155079 Msa0558420:CDS 65.0%
GCAGAGAGACCTGCCGGTGC+AGG + chr4_1:57155381-57155400 Msa0558420:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 57150858 57155742 57150858 ID=Msa0558420;Name=Msa0558420
chr4_1 mRNA 57150858 57155742 57150858 ID=Msa0558420-mRNA-1;Parent=Msa0558420;Name=Msa0558420-mRNA-1;_AED=0.05;_eAED=0.05;_QI=178|1|1|1|1|1|8|567|630
chr4_1 exon 57150858 57151145 57150858 ID=Msa0558420-mRNA-1:exon:17282;Parent=Msa0558420-mRNA-1
chr4_1 exon 57151253 57151328 57151253 ID=Msa0558420-mRNA-1:exon:17283;Parent=Msa0558420-mRNA-1
chr4_1 exon 57151968 57152026 57151968 ID=Msa0558420-mRNA-1:exon:17284;Parent=Msa0558420-mRNA-1
chr4_1 exon 57152355 57152848 57152355 ID=Msa0558420-mRNA-1:exon:17285;Parent=Msa0558420-mRNA-1
chr4_1 exon 57152927 57153087 57152927 ID=Msa0558420-mRNA-1:exon:17286;Parent=Msa0558420-mRNA-1
chr4_1 exon 57153191 57153394 57153191 ID=Msa0558420-mRNA-1:exon:17287;Parent=Msa0558420-mRNA-1
chr4_1 exon 57153923 57154157 57153923 ID=Msa0558420-mRNA-1:exon:17288;Parent=Msa0558420-mRNA-1
chr4_1 exon 57154622 57155742 57154622 ID=Msa0558420-mRNA-1:exon:17289;Parent=Msa0558420-mRNA-1
chr4_1 five_prime_UTR 57150858 57151035 57150858 ID=Msa0558420-mRNA-1:five_prime_utr;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57151036 57151145 57151036 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57151253 57151328 57151253 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57151968 57152026 57151968 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57152355 57152848 57152355 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57152927 57153087 57152927 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57153191 57153394 57153191 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57153923 57154157 57153923 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 CDS 57154622 57155175 57154622 ID=Msa0558420-mRNA-1:cds;Parent=Msa0558420-mRNA-1
chr4_1 three_prime_UTR 57155176 57155742 57155176 ID=Msa0558420-mRNA-1:three_prime_utr;Parent=Msa0558420-mRNA-1
Gene Sequence

>Msa0558420

ATGCACGGTAGGTACGTTGATCATCATGTAGCTAGGGCGGAGAAGAGAAGTTTGGATTCCACTTCTGCTGAAGATGGTCAGCCTGATCGGAAACGACCTGCTTTGGCTAGTGTGATTGTTGAAGCCCTGAAAGTGGATAGTATGCAGAAACTGTGTTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGTCCCACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCATAGAAGGCCCCGATGACAATAATTTACAATTGCACTTCAAGACCAGACTATCCCTTCCCCTTTTTACTGGCGGGAAAGTAGAAGGTGAGCAAGGGGCAGCCATACATATTGTTTTGGTTGATGCAAACACAGGCCATATTGTCACGTCAGGCCCAGAGTCATGTGCCAAACTAGATGTATTTGTTCTTGAGGGGGATTTCAATAATGAGGACGATGAAAATTGGAGTGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAACGTGAAGGAAAAAGGCCTCTTCTGTCTGGCGATCTGCAAGTTATATTAAAGGATGGTGTAGGAACACTGGGGGAGATCTCATTTACTGACAACTCCAGTTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTTCCTCAGGTTTTTGTGATGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAACTATACAAGAAACACTACCCACCGGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGAGTATTTAATGTTGAAGACTTCCTAAGACTTGTTATCAGAGACCCTCAGAGATTGCGTAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCATGCGAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATATTATCCCGAGGATGCAAGAAATGTGGGGGTTGTTTTCAATCACATTTATGAATTGAGCGGCTTAATTGCCAACGACCAGTATCACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTGGACACGTTGGTGAAGAAAGCATATGATAATTGGATGCACGTTATTGAGTATGATGGGAAGTCTCTACTAAATTACAATCAGGATAAAAATTTGGAACCAGCTCATCCTCAGGCTCTCATGGGTTCCCATGAGTATTCAAACTTAATACAGCAGACTTCTATCCATAGTTTGCCACATCCAGTAAATACGGGCCAACCTTCAATGGATACAGGAGCAACAGTTGGAGGTTATCATGATGGCACAACTACCAGCTTCTCCATGCAATCACAGAATACTAATCTTAATTCTTCTATCCAATTTGATGATAACGCATTTTCACTACAAAGCCAGCTGATGAGTGTTCCCCACCAAGCTCAACTTCAAAGAAGTGAAAATGGGATGATGCTTGGTATGCCACAAACAGTAACACACGGGTTCCAGACTGCCAGCATTTCAAATTCTACTTACAGAGGAGTTGAAGACTTCTTCCCAGAGGAAGAAATACGTATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATTTGCTCCGTATGTTTAACATGGGAAGCCATGCACATGCTTCTTTCAATTCCCACGAAGATGGGTACCCTAATCCATCTGCATACATGCCTGCAAACAACATGAGCTACAATTTTGACGATGAGCCAAAAAGTTCCTCGGGCAAAGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGTATTTTTGTTAGGAAGAAGGCTGCTGACAGACGGGCTCAACTCATTGAATTAGATGACTCTTGA
Protein sequence

>Msa0558420

MHGRYVDHHVARAEKRSLDSTSAEDGQPDRKRPALASVIVEALKVDSMQKLCSSLEPILRRVVSEEVERALAKLGPTKLNGRSSPKRIEGPDDNNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLVDANTGHIVTSGPESCAKLDVFVLEGDFNNEDDENWSEEEFESHIVKEREGKRPLLSGDLQVILKDGVGTLGEISFTDNSSWIRSRKFRLGLKVSSGFCDGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGVFNVEDFLRLVIRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYHSADSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYNQDKNLEPAHPQALMGSHEYSNLIQQTSIHSLPHPVNTGQPSMDTGATVGGYHDGTTTSFSMQSQNTNLNSSIQFDDNAFSLQSQLMSVPHQAQLQRSENGMMLGMPQTVTHGFQTASISNSTYRGVEDFFPEEEIRIRSHEMLENEDMQHLLRMFNMGSHAHASFNSHEDGYPNPSAYMPANNMSYNFDDEPKSSSGKAVVGWLKLKAALRWGIFVRKKAADRRAQLIELDDS*