Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408180 | XP_003626576.1 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408180 | sp|Q10FT0|PUB24_ORYSJ | 28.801 | 809 | 508 | 27 | 256 | 1000 | 15 | 819 | 7.81e-58 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408180 | G7L516 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1408180 | 0.822414 | 2.399627e-53 | -8.615850e-47 |
| Msa0013280 | Msa1408180 | 0.855808 | 4.919502e-62 | -8.615850e-47 |
| Msa0015670 | Msa1408180 | 0.805260 | 1.454416e-49 | -8.615850e-47 |
| Msa0028320 | Msa1408180 | 0.844605 | 6.817225e-59 | -8.615850e-47 |
| Msa0045550 | Msa1408180 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0062180 | Msa1408180 | 0.802880 | 4.548509e-49 | -8.615850e-47 |
| Msa0085290 | Msa1408180 | 0.813053 | 3.110307e-51 | -8.615850e-47 |
| Msa0092410 | Msa1408180 | 0.827436 | 1.566600e-54 | -8.615850e-47 |
| Msa0101620 | Msa1408180 | 0.817872 | 2.632396e-52 | -8.615850e-47 |
| Msa0106530 | Msa1408180 | 0.844262 | 8.428360e-59 | -8.615850e-47 |
| Msa0108770 | Msa1408180 | 0.801739 | 7.812575e-49 | -8.615850e-47 |
| Msa1344890 | Msa1408180 | 0.823525 | 1.321679e-53 | -8.615850e-47 |
| Msa1353890 | Msa1408180 | 0.827935 | 1.188744e-54 | -8.615850e-47 |
| Msa1360410 | Msa1408180 | 0.834569 | 2.778049e-56 | -8.615850e-47 |
| Msa1360420 | Msa1408180 | 0.807715 | 4.414679e-50 | -8.615850e-47 |
| Msa1367530 | Msa1408180 | 0.803967 | 2.707844e-49 | -8.615850e-47 |
| Msa1379580 | Msa1408180 | 0.817377 | 3.402694e-52 | -8.615850e-47 |
| Msa1385020 | Msa1408180 | 0.814019 | 1.906965e-51 | -8.615850e-47 |
| Msa1398890 | Msa1408180 | 0.805213 | 1.488175e-49 | -8.615850e-47 |
| Msa1400340 | Msa1408180 | 0.805518 | 1.284028e-49 | -8.615850e-47 |
| Msa1405820 | Msa1408180 | 0.807907 | 4.019264e-50 | -8.615850e-47 |
| Msa1408180 | Msa1416730 | 0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa1408180 | Msa1424630 | 0.866996 | 1.893970e-65 | -8.615850e-47 |
| Msa1408180 | Msa1430550 | 0.849541 | 3.025720e-60 | -8.615850e-47 |
| Msa1408180 | Msa1448980 | 0.997884 | 3.052262e-251 | -8.615850e-47 |
| Msa1408180 | Msa1458510 | 0.825129 | 5.545300e-54 | -8.615850e-47 |
| Msa0613190 | Msa1408180 | 0.808622 | 2.829613e-50 | -8.615850e-47 |
| Msa0614350 | Msa1408180 | 0.836501 | 9.018013e-57 | -8.615850e-47 |
| Msa0622170 | Msa1408180 | -0.800496 | 1.402703e-48 | -8.615850e-47 |
| Msa0631330 | Msa1408180 | 0.812573 | 3.961872e-51 | -8.615850e-47 |
| Msa0638990 | Msa1408180 | 0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0653440 | Msa1408180 | 0.805435 | 1.336613e-49 | -8.615850e-47 |
| Msa0662570 | Msa1408180 | 0.801525 | 8.642796e-49 | -8.615850e-47 |
| Msa0688150 | Msa1408180 | 0.819865 | 9.279331e-53 | -8.615850e-47 |
| Msa0696140 | Msa1408180 | 0.844138 | 9.099092e-59 | -8.615850e-47 |
| Msa0697570 | Msa1408180 | 0.845443 | 4.047934e-59 | -8.615850e-47 |
| Msa0708290 | Msa1408180 | 0.807320 | 5.355657e-50 | -8.615850e-47 |
| Msa0708300 | Msa1408180 | 0.807197 | 5.684643e-50 | -8.615850e-47 |
| Msa0708310 | Msa1408180 | 0.829437 | 5.149971e-55 | -8.615850e-47 |
| Msa0715420 | Msa1408180 | 0.806262 | 8.959497e-50 | -8.615850e-47 |
| Msa0758250 | Msa1408180 | 0.819035 | 1.434730e-52 | -8.615850e-47 |
| Msa0773380 | Msa1408180 | 0.803678 | 3.108333e-49 | -8.615850e-47 |
| Msa0786980 | Msa1408180 | 0.812950 | 3.274677e-51 | -8.615850e-47 |
| Msa0790680 | Msa1408180 | 0.806314 | 8.734373e-50 | -8.615850e-47 |
| Msa0800770 | Msa1408180 | 0.808417 | 3.129955e-50 | -8.615850e-47 |
| Msa0809140 | Msa1408180 | 0.808505 | 2.996968e-50 | -8.615850e-47 |
| Msa0827630 | Msa1408180 | 0.813785 | 2.146609e-51 | -8.615850e-47 |
| Msa0838930 | Msa1408180 | 0.810797 | 9.641373e-51 | -8.615850e-47 |
| Msa0131420 | Msa1408180 | 0.813724 | 2.214585e-51 | -8.615850e-47 |
| Msa0162690 | Msa1408180 | 0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0187830 | Msa1408180 | 0.847413 | 1.174830e-59 | -8.615850e-47 |
| Msa0189610 | Msa1408180 | 0.813624 | 2.329130e-51 | -8.615850e-47 |
| Msa0194010 | Msa1408180 | 0.819173 | 1.334279e-52 | -8.615850e-47 |
| Msa0201530 | Msa1408180 | 0.801461 | 8.907011e-49 | -8.615850e-47 |
| Msa0201570 | Msa1408180 | 0.807657 | 4.541735e-50 | -8.615850e-47 |
| Msa0202580 | Msa1408180 | 0.814779 | 1.294672e-51 | -8.615850e-47 |
| Msa0234590 | Msa1408180 | 0.824671 | 7.112509e-54 | -8.615850e-47 |
| Msa0235880 | Msa1408180 | 0.821582 | 3.740776e-53 | -8.615850e-47 |
| Msa1236730 | Msa1408180 | 0.838694 | 2.469402e-57 | -8.615850e-47 |
| Msa1238690 | Msa1408180 | 0.815788 | 7.724342e-52 | -8.615850e-47 |
| Msa1253660 | Msa1408180 | 0.816152 | 6.406249e-52 | -8.615850e-47 |
| Msa1255060 | Msa1408180 | 0.827612 | 1.421178e-54 | -8.615850e-47 |
| Msa1293940 | Msa1408180 | 0.819671 | 1.027606e-52 | -8.615850e-47 |
| Msa1295510 | Msa1408180 | 0.819626 | 1.052393e-52 | -8.615850e-47 |
| Msa1297310 | Msa1408180 | 0.816643 | 4.974603e-52 | -8.615850e-47 |
| Msa1304890 | Msa1408180 | -0.810414 | 1.166517e-50 | -8.615850e-47 |
| Msa1317130 | Msa1408180 | 0.803923 | 2.765218e-49 | -8.615850e-47 |
| Msa0364790 | Msa1408180 | 0.801096 | 1.057978e-48 | -8.615850e-47 |
| Msa0377840 | Msa1408180 | 0.825596 | 4.299599e-54 | -8.615850e-47 |
| Msa0408340 | Msa1408180 | 0.831979 | 1.227459e-55 | -8.615850e-47 |
| Msa0419670 | Msa1408180 | 0.829438 | 5.147451e-55 | -8.615850e-47 |
| Msa0419910 | Msa1408180 | 0.806461 | 8.136405e-50 | -8.615850e-47 |
| Msa0426560 | Msa1408180 | 0.843759 | 1.149893e-58 | -8.615850e-47 |
| Msa0429090 | Msa1408180 | 0.800445 | 1.436250e-48 | -8.615850e-47 |
| Msa0432670 | Msa1408180 | 0.802523 | 5.387127e-49 | -8.615850e-47 |
| Msa0466010 | Msa1408180 | 0.872790 | 2.426128e-67 | -8.615850e-47 |
| Msa0473140 | Msa1408180 | 0.809344 | 1.982080e-50 | -8.615850e-47 |
| Msa0982780 | Msa1408180 | 0.868171 | 7.958196e-66 | -8.615850e-47 |
| Msa0992680 | Msa1408180 | 0.803049 | 4.195808e-49 | -8.615850e-47 |
| Msa0998460 | Msa1408180 | 0.805968 | 1.033161e-49 | -8.615850e-47 |
| Msa1033780 | Msa1408180 | 0.817241 | 3.651178e-52 | -8.615850e-47 |
| Msa1034700 | Msa1408180 | 0.845007 | 5.309771e-59 | -8.615850e-47 |
| Msa1043120 | Msa1408180 | 0.835948 | 1.246102e-56 | -8.615850e-47 |
| Msa1073660 | Msa1408180 | 0.823861 | 1.102601e-53 | -8.615850e-47 |
| Msa1074540 | Msa1408180 | 0.821180 | 4.631079e-53 | -8.615850e-47 |
| Msa1084640 | Msa1408180 | 0.800656 | 1.301236e-48 | -8.615850e-47 |
| Msa0240270 | Msa1408180 | 0.814751 | 1.313354e-51 | -8.615850e-47 |
| Msa0269560 | Msa1408180 | 0.814592 | 1.424690e-51 | -8.615850e-47 |
| Msa0271550 | Msa1408180 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0277410 | Msa1408180 | 0.839740 | 1.322144e-57 | -8.615850e-47 |
| Msa0282720 | Msa1408180 | 0.813834 | 2.094502e-51 | -8.615850e-47 |
| Msa0319290 | Msa1408180 | 0.801159 | 1.026726e-48 | -8.615850e-47 |
| Msa1162060 | Msa1408180 | 0.820568 | 6.404667e-53 | -8.615850e-47 |
| Msa1177330 | Msa1408180 | 0.807475 | 4.963125e-50 | -8.615850e-47 |
| Msa1200710 | Msa1408180 | 0.818515 | 1.883152e-52 | -8.615850e-47 |
| Msa1205390 | Msa1408180 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0490380 | Msa1408180 | 0.829269 | 5.656806e-55 | -8.615850e-47 |
| Msa0501410 | Msa1408180 | 0.807394 | 5.163325e-50 | -8.615850e-47 |
| Msa0511620 | Msa1408180 | 0.813249 | 2.816379e-51 | -8.615850e-47 |
| Msa0517610 | Msa1408180 | 0.838841 | 2.263236e-57 | -8.615850e-47 |
| Msa0524330 | Msa1408180 | 0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0524440 | Msa1408180 | 0.815728 | 7.968912e-52 | -8.615850e-47 |
| Msa0526070 | Msa1408180 | -0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0534880 | Msa1408180 | 0.814756 | 1.310400e-51 | -8.615850e-47 |
| Msa0545150 | Msa1408180 | 0.809295 | 2.030889e-50 | -8.615850e-47 |
| Msa0558420 | Msa1408180 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0574570 | Msa1408180 | 0.854313 | 1.337926e-61 | -8.615850e-47 |
| Msa0574580 | Msa1408180 | 0.808206 | 3.469937e-50 | -8.615850e-47 |
| Msa0574600 | Msa1408180 | 0.820997 | 5.101985e-53 | -8.615850e-47 |
| Msa0580920 | Msa1408180 | 0.987419 | 3.429394e-170 | -8.615850e-47 |
| Msa0865970 | Msa1408180 | 0.827118 | 1.866358e-54 | -8.615850e-47 |
| Msa0866070 | Msa1408180 | 0.821997 | 2.997771e-53 | -8.615850e-47 |
| Msa0870060 | Msa1408180 | 0.846753 | 1.781929e-59 | -8.615850e-47 |
| Msa0870830 | Msa1408180 | 0.830552 | 2.753352e-55 | -8.615850e-47 |
| Msa0898320 | Msa1408180 | 0.818785 | 1.635603e-52 | -8.615850e-47 |
| Msa0919530 | Msa1408180 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
| Msa0936530 | Msa1408180 | 0.867620 | 1.196751e-65 | -8.615850e-47 |
| Msa0936550 | Msa1408180 | 0.840955 | 6.364154e-58 | -8.615850e-47 |
| Msa0952360 | Msa1408180 | 0.812148 | 4.905832e-51 | -8.615850e-47 |
| Msa0961650 | Msa1408180 | 0.819562 | 1.088090e-52 | -8.615850e-47 |
| Msa0972770 | Msa1408180 | 0.837157 | 6.132321e-57 | -8.615850e-47 |
| Msa0972810 | Msa1408180 | 0.800444 | 1.437354e-48 | -8.615850e-47 |
| Msa0973520 | Msa1408180 | 0.862604 | 4.505794e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408180 | MtrunA17_Chr7g0275961 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
| Msa1408180 | MtrunA17_Chr8g0346441 | 71.542 | 1005 | 281 | 3 | 1 | 1000 | 2 | 1006 | 0.0 | 1457 |
| Msa1408180 | MtrunA17_Chr1g0188041 | 28.940 | 1009 | 670 | 18 | 10 | 990 | 8 | 997 | 1.62e-117 | 385 |
| Msa1408180 | MtrunA17_Chr3g0084371 | 32.913 | 635 | 409 | 7 | 369 | 1000 | 213 | 833 | 4.12e-90 | 306 |
| Msa1408180 | MtrunA17_Chr3g0144071 | 28.752 | 793 | 511 | 26 | 253 | 1000 | 27 | 810 | 5.96e-71 | 252 |
| Msa1408180 | MtrunA17_Chr7g0248251 | 25.166 | 453 | 299 | 11 | 81 | 504 | 98 | 539 | 1.75e-21 | 100 |
| Msa1408180 | MtrunA17_Chr4g0031431 | 22.260 | 593 | 409 | 12 | 12 | 563 | 3 | 584 | 1.80e-19 | 94.0 |
| Msa1408180 | MtrunA17_Chr8g0373031 | 24.615 | 325 | 199 | 6 | 41 | 325 | 27 | 345 | 4.86e-19 | 92.8 |
| Msa1408180 | MtrunA17_Chr2g0284461 | 23.629 | 474 | 305 | 12 | 82 | 505 | 106 | 572 | 3.67e-18 | 90.1 |
| Msa1408180 | MtrunA17_Chr7g0237931 | 25.815 | 399 | 240 | 10 | 252 | 624 | 235 | 603 | 1.74e-17 | 87.4 |
| Msa1408180 | MtrunA17_Chr7g0234671 | 25.348 | 359 | 192 | 12 | 259 | 590 | 82 | 391 | 2.52e-16 | 83.2 |
| Msa1408180 | MtrunA17_Chr3g0106931 | 24.615 | 325 | 201 | 9 | 18 | 325 | 6 | 303 | 3.19e-16 | 84.0 |
| Msa1408180 | MtrunA17_Chr5g0434171 | 25.431 | 232 | 140 | 5 | 259 | 462 | 39 | 265 | 5.24e-15 | 78.6 |
| Msa1408180 | MtrunA17_Chr1g0183781 | 22.785 | 316 | 218 | 8 | 14 | 321 | 10 | 307 | 1.35e-14 | 78.6 |
| Msa1408180 | MtrunA17_Chr4g0059201 | 23.788 | 433 | 281 | 15 | 84 | 474 | 141 | 566 | 2.47e-14 | 77.4 |
| Msa1408180 | MtrunA17_Chr3g0122721 | 24.242 | 363 | 203 | 10 | 19 | 325 | 4 | 350 | 3.28e-14 | 77.4 |
| Msa1408180 | MtrunA17_Chr3g0129811 | 23.496 | 349 | 199 | 10 | 259 | 578 | 87 | 396 | 6.42e-14 | 75.5 |
| Msa1408180 | MtrunA17_Chr1g0199321 | 30.556 | 216 | 123 | 5 | 252 | 443 | 245 | 457 | 6.51e-14 | 75.9 |
| Msa1408180 | MtrunA17_Chr2g0280671 | 25.140 | 358 | 233 | 11 | 256 | 589 | 16 | 362 | 8.77e-14 | 74.3 |
| Msa1408180 | MtrunA17_Chr4g0044631 | 36.458 | 96 | 54 | 1 | 253 | 341 | 5 | 100 | 1.85e-13 | 73.6 |
| Msa1408180 | MtrunA17_Chr7g0214471 | 29.878 | 164 | 103 | 5 | 257 | 409 | 597 | 759 | 1.88e-13 | 75.1 |
| Msa1408180 | MtrunA17_Chr1g0196911 | 45.205 | 73 | 39 | 1 | 254 | 325 | 505 | 577 | 3.14e-13 | 74.3 |
| Msa1408180 | MtrunA17_Chr4g0013091 | 26.378 | 254 | 159 | 7 | 82 | 321 | 140 | 379 | 4.93e-13 | 73.6 |
| Msa1408180 | MtrunA17_Chr5g0437411 | 25.740 | 338 | 203 | 9 | 259 | 553 | 297 | 629 | 6.17e-13 | 73.2 |
| Msa1408180 | MtrunA17_Chr8g0390311 | 32.847 | 137 | 70 | 3 | 204 | 325 | 337 | 466 | 9.59e-13 | 72.8 |
| Msa1408180 | MtrunA17_Chr6g0479261 | 46.032 | 63 | 34 | 0 | 259 | 321 | 29 | 91 | 1.06e-12 | 71.6 |
| Msa1408180 | MtrunA17_Chr7g0275081 | 24.169 | 331 | 189 | 8 | 255 | 584 | 78 | 347 | 1.14e-12 | 71.6 |
| Msa1408180 | MtrunA17_Chr3g0110121 | 42.029 | 69 | 40 | 0 | 258 | 326 | 39 | 107 | 2.49e-12 | 70.5 |
| Msa1408180 | MtrunA17_Chr8g0384041 | 38.554 | 83 | 43 | 1 | 259 | 341 | 14 | 88 | 2.92e-12 | 70.1 |
| Msa1408180 | MtrunA17_Chr5g0420471 | 44.444 | 63 | 35 | 0 | 259 | 321 | 29 | 91 | 4.58e-12 | 69.3 |
| Msa1408180 | MtrunA17_Chr4g0048811 | 43.939 | 66 | 36 | 1 | 257 | 321 | 7 | 72 | 4.70e-12 | 68.6 |
| Msa1408180 | MtrunA17_Chr8g0377151 | 41.096 | 73 | 43 | 0 | 255 | 327 | 282 | 354 | 6.01e-12 | 70.1 |
| Msa1408180 | MtrunA17_Chr1g0177271 | 41.860 | 86 | 44 | 3 | 251 | 330 | 3 | 88 | 1.09e-11 | 68.2 |
| Msa1408180 | MtrunA17_Chr3g0079051 | 47.887 | 71 | 36 | 1 | 254 | 324 | 738 | 807 | 1.79e-11 | 68.6 |
| Msa1408180 | MtrunA17_Chr1g0177281 | 42.683 | 82 | 41 | 3 | 251 | 326 | 3 | 84 | 2.19e-11 | 67.4 |
| Msa1408180 | MtrunA17_Chr5g0413681 | 26.087 | 207 | 135 | 5 | 134 | 327 | 151 | 352 | 3.16e-11 | 67.4 |
| Msa1408180 | MtrunA17_Chr7g0261371 | 24.232 | 293 | 190 | 8 | 42 | 325 | 42 | 311 | 6.72e-11 | 66.6 |
| Msa1408180 | MtrunA17_Chr1g0177261 | 42.683 | 82 | 41 | 3 | 251 | 326 | 3 | 84 | 7.10e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408180 | AT1G76390.1 | 27.919 | 788 | 517 | 28 | 257 | 1000 | 27 | 807 | 5.13e-56 | 209 |
| Msa1408180 | AT1G76390.2 | 27.919 | 788 | 517 | 28 | 257 | 1000 | 27 | 807 | 5.13e-56 | 209 |
| Msa1408180 | AT1G68940.1 | 24.568 | 1099 | 700 | 39 | 9 | 1000 | 9 | 1085 | 5.76e-54 | 205 |
| Msa1408180 | AT1G20780.1 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
| Msa1408180 | AT1G20780.2 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
| Msa1408180 | AT1G20780.3 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
| Msa1408180 | AT1G68940.2 | 24.877 | 1017 | 652 | 36 | 9 | 929 | 9 | 1009 | 4.12e-51 | 196 |
| Msa1408180 | AT1G68940.3 | 28.309 | 763 | 485 | 30 | 217 | 929 | 206 | 956 | 7.54e-51 | 195 |
| Msa1408180 | AT5G42340.1 | 25.996 | 477 | 291 | 13 | 81 | 540 | 117 | 548 | 7.45e-22 | 102 |
| Msa1408180 | AT5G01830.1 | 23.874 | 444 | 296 | 11 | 82 | 495 | 104 | 535 | 2.02e-20 | 97.4 |
| Msa1408180 | AT3G46510.1 | 22.798 | 579 | 381 | 12 | 14 | 545 | 8 | 567 | 4.48e-20 | 96.3 |
| Msa1408180 | AT1G29340.1 | 23.355 | 471 | 308 | 12 | 82 | 504 | 118 | 583 | 1.71e-18 | 91.7 |
| Msa1408180 | AT1G67530.2 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
| Msa1408180 | AT1G67530.1 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
| Msa1408180 | AT1G67530.4 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
| Msa1408180 | AT1G67530.3 | 25.862 | 348 | 211 | 11 | 19 | 326 | 3 | 343 | 2.12e-17 | 87.4 |
| Msa1408180 | AT1G24330.1 | 23.053 | 655 | 404 | 19 | 19 | 586 | 3 | 644 | 2.51e-17 | 87.8 |
| Msa1408180 | AT1G24330.2 | 23.053 | 655 | 404 | 19 | 19 | 586 | 3 | 644 | 2.51e-17 | 87.8 |
| Msa1408180 | AT1G60190.1 | 25.346 | 434 | 272 | 12 | 82 | 474 | 102 | 524 | 3.11e-17 | 87.4 |
| Msa1408180 | AT3G54790.3 | 26.573 | 286 | 190 | 9 | 60 | 341 | 55 | 324 | 9.35e-17 | 85.9 |
| Msa1408180 | AT3G54790.1 | 26.573 | 286 | 190 | 9 | 60 | 341 | 55 | 324 | 9.35e-17 | 85.9 |
| Msa1408180 | AT3G54790.2 | 26.573 | 286 | 190 | 9 | 60 | 341 | 19 | 288 | 1.27e-16 | 85.5 |
| Msa1408180 | AT4G36550.1 | 26.349 | 315 | 192 | 8 | 39 | 343 | 23 | 307 | 1.52e-16 | 85.1 |
| Msa1408180 | AT1G27910.1 | 26.460 | 291 | 165 | 9 | 82 | 327 | 65 | 351 | 6.95e-16 | 83.2 |
| Msa1408180 | AT5G67340.1 | 21.649 | 582 | 379 | 14 | 49 | 586 | 48 | 596 | 7.60e-16 | 82.8 |
| Msa1408180 | AT5G67340.2 | 21.649 | 582 | 379 | 14 | 49 | 586 | 48 | 596 | 7.60e-16 | 82.8 |
| Msa1408180 | AT1G49780.1 | 39.000 | 100 | 54 | 1 | 253 | 345 | 5 | 104 | 1.21e-15 | 80.9 |
| Msa1408180 | AT1G23030.1 | 26.062 | 353 | 226 | 11 | 259 | 585 | 245 | 588 | 1.32e-15 | 82.0 |
| Msa1408180 | AT3G07360.1 | 24.697 | 413 | 222 | 14 | 183 | 582 | 9 | 345 | 1.98e-15 | 80.5 |
| Msa1408180 | AT2G28830.1 | 27.857 | 280 | 170 | 7 | 255 | 505 | 184 | 460 | 9.16e-15 | 79.0 |
| Msa1408180 | AT1G71020.2 | 26.463 | 393 | 234 | 14 | 246 | 622 | 86 | 439 | 2.43e-14 | 77.4 |
| Msa1408180 | AT1G71020.1 | 26.463 | 393 | 234 | 14 | 246 | 622 | 234 | 587 | 2.57e-14 | 77.8 |
| Msa1408180 | AT3G54850.1 | 23.517 | 472 | 297 | 14 | 13 | 443 | 11 | 459 | 5.02e-14 | 77.0 |
| Msa1408180 | AT2G23140.1 | 31.250 | 176 | 109 | 3 | 152 | 325 | 138 | 303 | 2.44e-13 | 75.1 |
| Msa1408180 | AT2G23140.2 | 31.250 | 176 | 109 | 3 | 152 | 325 | 135 | 300 | 2.57e-13 | 74.7 |
| Msa1408180 | AT2G23140.4 | 31.250 | 176 | 109 | 3 | 152 | 325 | 135 | 300 | 2.57e-13 | 74.7 |
| Msa1408180 | AT1G10560.1 | 24.603 | 378 | 216 | 14 | 12 | 343 | 21 | 375 | 2.95e-13 | 74.3 |
| Msa1408180 | AT5G51270.2 | 37.288 | 118 | 58 | 4 | 210 | 325 | 701 | 804 | 3.13e-13 | 74.7 |
| Msa1408180 | AT5G51270.1 | 37.288 | 118 | 58 | 4 | 210 | 325 | 701 | 804 | 3.13e-13 | 74.7 |
| Msa1408180 | AT3G18710.1 | 31.176 | 170 | 96 | 7 | 259 | 411 | 16 | 181 | 3.55e-13 | 73.2 |
| Msa1408180 | AT3G19380.1 | 26.471 | 204 | 127 | 3 | 259 | 439 | 18 | 221 | 1.19e-12 | 71.6 |
| Msa1408180 | AT1G56040.1 | 41.935 | 93 | 50 | 3 | 228 | 320 | 330 | 418 | 4.49e-12 | 69.7 |
| Msa1408180 | AT2G23140.3 | 45.714 | 70 | 38 | 0 | 256 | 325 | 42 | 111 | 1.26e-11 | 69.3 |
| Msa1408180 | AT2G23140.5 | 45.714 | 70 | 38 | 0 | 256 | 325 | 42 | 111 | 1.26e-11 | 69.3 |
| Msa1408180 | AT5G37490.1 | 46.032 | 63 | 34 | 0 | 259 | 321 | 35 | 97 | 2.73e-11 | 67.4 |
| Msa1408180 | AT3G61390.4 | 42.647 | 68 | 39 | 0 | 254 | 321 | 277 | 344 | 4.54e-11 | 66.2 |
| Msa1408180 | AT1G56030.1 | 30.387 | 181 | 92 | 7 | 170 | 320 | 212 | 388 | 4.75e-11 | 66.6 |
| Msa1408180 | AT5G09800.1 | 43.077 | 65 | 37 | 0 | 259 | 323 | 15 | 79 | 6.63e-11 | 66.2 |
| Msa1408180 | AT3G61390.2 | 42.647 | 68 | 39 | 0 | 254 | 321 | 352 | 419 | 7.03e-11 | 66.2 |
| Msa1408180 | AT3G52450.1 | 42.857 | 77 | 43 | 1 | 251 | 326 | 3 | 79 | 9.64e-11 | 65.9 |
Find 246 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAAATGTACAAGATATT+TGG | 0.110314 | tig0023376:+34354 | None:intergenic |
| ATAGATTCTGAAGAGCTTTA+AGG | 0.144806 | tig0023376:+36756 | None:intergenic |
| TGTTTCTTCTTCCTTAATTC+TGG | 0.167218 | tig0023376:-40232 | Msa1408180:five_prime_UTR |
| CAAAAGAGTGCAGCCGAAAT+TGG | 0.190596 | tig0023376:-35329 | Msa1408180:CDS |
| CTGTTTGCAACTTCTGATTA+AGG | 0.200985 | tig0023376:+39555 | None:intergenic |
| TGCAGCAAGTTGCATAATTA+TGG | 0.224435 | tig0023376:+36619 | None:intergenic |
| TGGACATGTAGGGATTTATT+TGG | 0.231092 | tig0023376:-34394 | Msa1408180:three_prime_UTR |
| TGCCAAAGCGCAAGGGATTT+TGG | 0.237542 | tig0023376:-35193 | Msa1408180:CDS |
| TTGTACATTTGAGGATTTAT+AGG | 0.243808 | tig0023376:-34345 | Msa1408180:three_prime_UTR |
| CTTCGCCAAACGAGATTCTT+TGG | 0.244268 | tig0023376:-38711 | Msa1408180:CDS |
| CCGTTCTCTTGGGCGTCGTT+TGG | 0.249163 | tig0023376:-37615 | Msa1408180:CDS |
| AAGTCTCTATACAATATTTC+CGG | 0.254458 | tig0023376:+40306 | None:intergenic |
| TATGCAGGCAGCTGAATTTA+AGG | 0.260625 | tig0023376:-39008 | Msa1408180:CDS |
| CTCAAATGTACAAGATATTT+GGG | 0.265304 | tig0023376:+34355 | None:intergenic |
| GCCCGTAATGGGGCAATAAA+AGG | 0.265730 | tig0023376:+38661 | None:intergenic |
| TACATTGAGCTATTTCTTCA+TGG | 0.282646 | tig0023376:-34492 | Msa1408180:three_prime_UTR |
| CGTTCTCTTGGGCGTCGTTT+GGG | 0.288386 | tig0023376:-37614 | Msa1408180:CDS |
| TTTAGGCTACTGTTGTATTA+AGG | 0.291315 | tig0023376:-34429 | Msa1408180:three_prime_UTR |
| TTTCTACCAACTTACTCTTT+TGG | 0.294603 | tig0023376:+35402 | None:intergenic |
| GTTCCTCATGCTGGTAACTA+TGG | 0.296688 | tig0023376:-34532 | Msa1408180:three_prime_UTR |
| CAACTACGCTATTGAGGTTC+TGG | 0.297090 | tig0023376:-39233 | Msa1408180:CDS |
| AACAGTTATGATCCCAATTT+CGG | 0.302499 | tig0023376:+35316 | None:intergenic |
| GGATCAAATTATTGCTTTGT+TGG | 0.303566 | tig0023376:-38780 | Msa1408180:CDS |
| TGGTGGTGTCCTTGTGAATA+AGG | 0.304782 | tig0023376:-39347 | Msa1408180:CDS |
| ATCCTTGGCAGCTCGAATAT+TGG | 0.309644 | tig0023376:-34781 | Msa1408180:CDS |
| GGCACTTGGTCTTCTTCCTT+TGG | 0.310541 | tig0023376:-39086 | Msa1408180:CDS |
| ACCATAACATCGCCCGTAAT+GGG | 0.322592 | tig0023376:+38650 | None:intergenic |
| TTTGATTTCTTCAATTATTC+CGG | 0.327097 | tig0023376:+39045 | None:intergenic |
| TTCTCTTAACAAATCATATT+CGG | 0.327657 | tig0023376:+37553 | None:intergenic |
| TTCATTTCCCCTTCACCTCC+AGG | 0.332139 | tig0023376:-40185 | Msa1408180:intron |
| TTCTTCTATTGATTGTTTCA+AGG | 0.332181 | tig0023376:+38496 | None:intergenic |
| CGCCCTCAGCTTCATATATC+AGG | 0.332763 | tig0023376:-36454 | Msa1408180:CDS |
| TTAGAGTTCAAACAGAAATA+TGG | 0.332862 | tig0023376:-34861 | Msa1408180:CDS |
| GAGTCTATTGTCCGTTCTCT+TGG | 0.337575 | tig0023376:-37626 | Msa1408180:CDS |
| AATTAAAGATGGAAAGAAAT+TGG | 0.338387 | tig0023376:-39203 | Msa1408180:CDS |
| GGTCAAAATGTTGGCAGAAA+TGG | 0.338784 | tig0023376:-36879 | Msa1408180:CDS |
| CCAAATATCTTGTACATTTG+AGG | 0.343134 | tig0023376:-34354 | Msa1408180:three_prime_UTR |
| TGAGTGATCTGTTGAACTTT+TGG | 0.343181 | tig0023376:+35494 | None:intergenic |
| AGAAACATAAACCAGAATTA+AGG | 0.344981 | tig0023376:+40221 | None:intergenic |
| CCCCATTACGGGCGATGTTA+TGG | 0.345236 | tig0023376:-38651 | Msa1408180:CDS |
| GTTGGCGGTGGCATTACTTC+TGG | 0.351916 | tig0023376:-37582 | Msa1408180:CDS |
| GCTCTTCTAACTTTAATTGA+TGG | 0.352227 | tig0023376:-35017 | Msa1408180:CDS |
| TAGATTCTGAAGAGCTTTAA+GGG | 0.353045 | tig0023376:+36757 | None:intergenic |
| ATTTGAAGTTGAACTGTAAC+TGG | 0.356328 | tig0023376:-39590 | Msa1408180:five_prime_UTR |
| CTTCTTCCTTTGGCTACATC+AGG | 0.362361 | tig0023376:-39076 | Msa1408180:CDS |
| TAATGATGTTGAGATGAAAT+TGG | 0.364558 | tig0023376:-36783 | Msa1408180:CDS |
| TCAAGGTTGCATACTACTAT+TGG | 0.366183 | tig0023376:-37516 | Msa1408180:CDS |
| GATCTTTATCCGTGCCTTCT+TGG | 0.368976 | tig0023376:+35426 | None:intergenic |
| AATAATTTGATCCATTTGTA+TGG | 0.372930 | tig0023376:+38790 | None:intergenic |
| TAATATCTCTTCCTCAGATA+TGG | 0.374661 | tig0023376:+38982 | None:intergenic |
| GGAAAAGTCTCTTAATGCTT+TGG | 0.376746 | tig0023376:-34901 | Msa1408180:CDS |
| TCAAGATTTGTGTGAACAAA+AGG | 0.380110 | tig0023376:-38378 | Msa1408180:CDS |
| AAGAGATGCAACAGAGTTAC+TGG | 0.382745 | tig0023376:-37459 | Msa1408180:CDS |
| CAAGAGAAGATTGAACCTTA+TGG | 0.385245 | tig0023376:+34668 | None:intergenic |
| CACCAAAATCCCTTGCGCTT+TGG | 0.387064 | tig0023376:+35191 | None:intergenic |
| GAAAATTGAGTCAGCGATAC+AGG | 0.388658 | tig0023376:-38957 | Msa1408180:CDS |
| AGAAGAAATTGTTTCTGCTA+TGG | 0.390914 | tig0023376:-35534 | Msa1408180:CDS |
| CCGAGAAATCTTATTATTAG+TGG | 0.391945 | tig0023376:+34945 | None:intergenic |
| CTTCTCATTGCAGATGCTGT+TGG | 0.393808 | tig0023376:-38896 | Msa1408180:CDS |
| CTCTTCTAACTTTAATTGAT+GGG | 0.399492 | tig0023376:-35016 | Msa1408180:CDS |
| GGACCATGAAGGAGTCTTCC+CGG | 0.403098 | tig0023376:-40325 | Msa1408180:five_prime_UTR |
| ACTCTTGGGGACTCTGATCT+TGG | 0.404813 | tig0023376:-35062 | Msa1408180:CDS |
| AATCCCTTGCGCTTTGGCAT+TGG | 0.405028 | tig0023376:+35197 | None:intergenic |
| TAAAAGAGTTGTATTGACTT+TGG | 0.411866 | tig0023376:-40346 | Msa1408180:five_prime_UTR |
| TTGAGGAAGGAAGGCTATGC+TGG | 0.412864 | tig0023376:+36663 | None:intergenic |
| CCACTAATAATAAGATTTCT+CGG | 0.413661 | tig0023376:-34945 | Msa1408180:CDS |
| GAGCACTAGCAAAGACTCTT+GGG | 0.415263 | tig0023376:-35076 | Msa1408180:CDS |
| GAAGAAATTGTTTCTGCTAT+GGG | 0.415771 | tig0023376:-35533 | Msa1408180:CDS |
| ACTCCAACTTGGACAGGAAA+TGG | 0.418628 | tig0023376:-34610 | Msa1408180:three_prime_UTR |
| GCAAGAATTTGGATAAGAAC+AGG | 0.422587 | tig0023376:+38317 | None:intergenic |
| CAGATGAAGATTTCAGCATC+TGG | 0.423656 | tig0023376:+35561 | None:intergenic |
| ACATAGAGAATGGGTGGTAC+TGG | 0.424708 | tig0023376:-38351 | Msa1408180:CDS |
| CTCAGTGGCTTTATGATGCC+GGG | 0.426765 | tig0023376:-35475 | Msa1408180:CDS |
| TTCGCCAAACGAGATTCTTT+GGG | 0.428118 | tig0023376:-38710 | Msa1408180:CDS |
| TCTGCCTCCTCTTCTTCGCT+TGG | 0.432088 | tig0023376:-36813 | Msa1408180:CDS |
| GACATAAGGAATAAAATGTC+TGG | 0.432764 | tig0023376:+36480 | None:intergenic |
| GACCCTGTGGAAACTTCATC+AGG | 0.432982 | tig0023376:-38626 | Msa1408180:CDS |
| TCCGAGATTGTATATTCTGC+TGG | 0.433338 | tig0023376:-39367 | Msa1408180:CDS |
| AACCATAACATCGCCCGTAA+TGG | 0.435781 | tig0023376:+38649 | None:intergenic |
| GTTCTCTTGGGCGTCGTTTG+GGG | 0.436743 | tig0023376:-37613 | Msa1408180:CDS |
| TCGGACTCTAACAATGAAAC+TGG | 0.436901 | tig0023376:+36569 | None:intergenic |
| TTTCCGGGAAGACTCCTTCA+TGG | 0.438144 | tig0023376:+40322 | None:intergenic |
| ATTGACGTCTGGTCCTGCTT+CGG | 0.440408 | tig0023376:-39419 | Msa1408180:CDS |
| TGCCCTGATGAAGTTTCCAC+AGG | 0.443199 | tig0023376:+38623 | None:intergenic |
| AAAAGAGTGCAGCCGAAATT+GGG | 0.444063 | tig0023376:-35328 | Msa1408180:CDS |
| AGTCTATTGTCCGTTCTCTT+GGG | 0.444455 | tig0023376:-37625 | Msa1408180:CDS |
| AGAGAGAGACCTGGAGGTGA+AGG | 0.445746 | tig0023376:+40176 | None:intergenic |
| AAAAGGATCAACATAGAGAA+TGG | 0.445892 | tig0023376:-38361 | Msa1408180:CDS |
| CCTTGTCATCCTTTGCATGC+TGG | 0.448757 | tig0023376:-38264 | Msa1408180:CDS |
| AGTCTCTATACAATATTTCC+GGG | 0.453734 | tig0023376:+40307 | None:intergenic |
| CAGCACTTGCTCGAAGACTT+AGG | 0.455970 | tig0023376:+35669 | None:intergenic |
| GGAGCACTAGCAAAGACTCT+TGG | 0.456202 | tig0023376:-35077 | Msa1408180:CDS |
| ATAATATATTGTCGCACATC+AGG | 0.457156 | tig0023376:+36503 | None:intergenic |
| GACTTAACTCAGCGGGGTAA+TGG | 0.459297 | tig0023376:-34813 | Msa1408180:CDS |
| TGAGAAATAGCTTCCGAAGC+AGG | 0.459853 | tig0023376:+39406 | None:intergenic |
| AAATTATTGCTTTGTTGGAA+AGG | 0.461802 | tig0023376:-38775 | Msa1408180:CDS |
| CCACTGCATCAGCCTCCAAT+AGG | 0.465482 | tig0023376:+35099 | None:intergenic |
| GCAGCAAGTTGCATAATTAT+GGG | 0.468365 | tig0023376:+36620 | None:intergenic |
| ACAACACAAGCGAGATTAGC+AGG | 0.469123 | tig0023376:-39108 | Msa1408180:CDS |
| AGAGAAGTGCAATTGAAAAG+TGG | 0.470162 | tig0023376:-38592 | Msa1408180:CDS |
| GGAGTCAACAGACCACAATA+AGG | 0.470502 | tig0023376:-36858 | Msa1408180:CDS |
| AGAACACAATCATTCTAGAA+AGG | 0.471476 | tig0023376:+34290 | None:intergenic |
| GAATACATTGGAAAAGTTCA+AGG | 0.472905 | tig0023376:-37533 | Msa1408180:CDS |
| TTAGTACAGTTGCTTGAAAG+TGG | 0.473074 | tig0023376:-35293 | Msa1408180:CDS |
| TCTGTTTGAACTCTAATAGC+CGG | 0.477505 | tig0023376:+34868 | None:intergenic |
| TTATTGCAGCGCCTCTCCGC+AGG | 0.479058 | tig0023376:-37374 | Msa1408180:intron |
| TTCTTTGGGCACTCAACCGT+TGG | 0.479972 | tig0023376:-38696 | Msa1408180:CDS |
| AGCTGAGGGCGAGTGACATA+AGG | 0.486360 | tig0023376:+36466 | None:intergenic |
| ATGAGAGAGAAAATCCAGTC+TGG | 0.486384 | tig0023376:-38437 | Msa1408180:CDS |
| AACCGTTGCAAACTCCAACT+TGG | 0.491187 | tig0023376:-34621 | Msa1408180:three_prime_UTR |
| GACATTCAACTACGCTATTG+AGG | 0.492101 | tig0023376:-39239 | Msa1408180:CDS |
| TAATGGTAGCATTAAATCCT+TGG | 0.492614 | tig0023376:-34796 | Msa1408180:CDS |
| AGATGATGTGAAGATGATTA+TGG | 0.492830 | tig0023376:-36900 | Msa1408180:CDS |
| AAAACAGTTGAGCAAAGAAA+AGG | 0.493725 | tig0023376:-39275 | Msa1408180:CDS |
| CGCTGAGTTAAGTCAACTAA+AGG | 0.494837 | tig0023376:+34822 | None:intergenic |
| CCGATGCAGCCTCATCAACT+AGG | 0.494891 | tig0023376:-38751 | Msa1408180:CDS |
| TTCTCTTGATCCTTTGAGTG+TGG | 0.495152 | tig0023376:-34653 | Msa1408180:three_prime_UTR |
| AGTGCCCAAAGAATCTCGTT+TGG | 0.495380 | tig0023376:+38706 | None:intergenic |
| GCTACATCAGGCCTTTCTGC+CGG | 0.495835 | tig0023376:-39064 | Msa1408180:CDS |
| GTGCCCATCAGTTCTAGTAT+TGG | 0.496921 | tig0023376:-35714 | Msa1408180:CDS |
| TTCCTCATGCTGGTAACTAT+GGG | 0.497280 | tig0023376:-34531 | Msa1408180:three_prime_UTR |
| ACTCAGTGGCTTTATGATGC+CGG | 0.497763 | tig0023376:-35476 | Msa1408180:CDS |
| CTGATTCACATGCTTTAGTA+CGG | 0.497925 | tig0023376:+35604 | None:intergenic |
| CAGTTCCAACAAACTTGGAA+TGG | 0.500790 | tig0023376:-35352 | Msa1408180:CDS |
| AGCCTCATCAACTAGGGAAA+AGG | 0.501840 | tig0023376:-38744 | Msa1408180:CDS |
| TTCTCAGCTCAAACAGAAGC+CGG | 0.503222 | tig0023376:-35167 | Msa1408180:CDS |
| GAACACAATCATTCTAGAAA+GGG | 0.503272 | tig0023376:+34291 | None:intergenic |
| CCGGGCTGAAGCCATACAAA+TGG | 0.503510 | tig0023376:-38801 | Msa1408180:CDS |
| GAAGCCGGATGCTTAGTTCA+TGG | 0.503760 | tig0023376:-35152 | Msa1408180:CDS |
| TTCTCTTGGGCGTCGTTTGG+GGG | 0.506612 | tig0023376:-37612 | Msa1408180:CDS |
| TTTAGTTGACTTAACTCAGC+GGG | 0.507459 | tig0023376:-34820 | Msa1408180:CDS |
| ATTAAGGAAGAAGAAACAAG+TGG | 0.508143 | tig0023376:+40237 | None:intergenic |
| AGTCAAGCTAACTAACCATA+AGG | 0.508261 | tig0023376:-34683 | Msa1408180:three_prime_UTR |
| TGAAACAATCAATAGAAGAA+TGG | 0.509887 | tig0023376:-38493 | Msa1408180:CDS |
| CTGGATCGTGAAATTAAAGA+TGG | 0.511439 | tig0023376:-39214 | Msa1408180:CDS |
| AAATTGAAAATGAGAAAGAC+CGG | 0.513019 | tig0023376:-38820 | Msa1408180:CDS |
| GCTCTCGATTCATTGACGTC+TGG | 0.513409 | tig0023376:-39430 | Msa1408180:CDS |
| CCTAGTTGATGAGGCTGCAT+CGG | 0.516667 | tig0023376:+38751 | None:intergenic |
| AGAATATACAATCTCGGAAA+CGG | 0.522713 | tig0023376:+39372 | None:intergenic |
| AGGATCACCATTGGACATGT+AGG | 0.524032 | tig0023376:-34405 | Msa1408180:three_prime_UTR |
| AAAGGATCAACATAGAGAAT+GGG | 0.525376 | tig0023376:-38360 | Msa1408180:CDS |
| AAGAAGCAAATTATTTGCAT+AGG | 0.529424 | tig0023376:+38916 | None:intergenic |
| AGCGAGATTAGCAGGGCACT+TGG | 0.531022 | tig0023376:-39100 | Msa1408180:CDS |
| GAAATGGTACTCTTTGACAA+AGG | 0.532276 | tig0023376:-34594 | Msa1408180:three_prime_UTR |
| CTTCAATTATTCCGGCAGAA+AGG | 0.532534 | tig0023376:+39053 | None:intergenic |
| GAATAATTGAAGAAATCAAA+AGG | 0.533410 | tig0023376:-39042 | Msa1408180:CDS |
| CTTCATCACAACTTTCTACC+AGG | 0.533965 | tig0023376:+35630 | None:intergenic |
| ACCACCATGAACTAAGCATC+CGG | 0.534367 | tig0023376:+35148 | None:intergenic |
| TTAACCAATACTAGAACTGA+TGG | 0.534861 | tig0023376:+35710 | None:intergenic |
| CCAAACGACGCCCAAGAGAA+CGG | 0.534864 | tig0023376:+37615 | None:intergenic |
| ATCCAGTCTGGAGATGAAGT+TGG | 0.536931 | tig0023376:-38425 | Msa1408180:CDS |
| CCTATTGGAGGCTGATGCAG+TGG | 0.539684 | tig0023376:-35099 | Msa1408180:CDS |
| TTGCAAACTCCAACTTGGAC+AGG | 0.540541 | tig0023376:-34616 | Msa1408180:three_prime_UTR |
| CAGTCCAATGCCAAAGCGCA+AGG | 0.546854 | tig0023376:-35201 | Msa1408180:CDS |
| TCTTCTAACTTTAATTGATG+GGG | 0.547043 | tig0023376:-35015 | Msa1408180:CDS |
| AAGTTGAACTGTAACTGGTA+TGG | 0.547293 | tig0023376:-39585 | Msa1408180:five_prime_UTR |
| ATTGATGTGGTTCCTCATGC+TGG | 0.548569 | tig0023376:-34541 | Msa1408180:three_prime_UTR |
| AAGGTTATGTGACAATATGC+AGG | 0.548812 | tig0023376:-39023 | Msa1408180:CDS |
| ATTGAAAAGTGGTTTGCAGA+AGG | 0.549173 | tig0023376:-38581 | Msa1408180:CDS |
| CTCCAACTTCATCTCCAGAC+TGG | 0.550709 | tig0023376:+38423 | None:intergenic |
| GAGAGAGACCTGGAGGTGAA+GGG | 0.551453 | tig0023376:+40177 | None:intergenic |
| TATTAAGGTAGGATCACCAT+TGG | 0.553192 | tig0023376:-34414 | Msa1408180:three_prime_UTR |
| GTCCAAGTTGGAGTTTGCAA+CGG | 0.553493 | tig0023376:+34619 | None:intergenic |
| TGCCAATATTCGAGCTGCCA+AGG | 0.556667 | tig0023376:+34779 | None:intergenic |
| TGTGAGACCAAGCGAAGAAG+AGG | 0.557284 | tig0023376:+36806 | None:intergenic |
| AGAGAGACCTGGAGGTGAAG+GGG | 0.557734 | tig0023376:+40178 | None:intergenic |
| GATGATTATGGTCAAAATGT+TGG | 0.559722 | tig0023376:-36888 | Msa1408180:CDS |
| AGATCTCCAAAAGAGTAAGT+TGG | 0.561048 | tig0023376:-35408 | Msa1408180:CDS |
| GGCTACTGTTGTATTAAGGT+AGG | 0.564180 | tig0023376:-34425 | Msa1408180:three_prime_UTR |
| GGGCAATAAAAGGACTGTAA+AGG | 0.567503 | tig0023376:+38671 | None:intergenic |
| CATCCTTTGCATGCTGGTGA+AGG | 0.567676 | tig0023376:-38258 | Msa1408180:CDS |
| GTACCATTTCCTGTCCAAGT+TGG | 0.569180 | tig0023376:+34607 | None:intergenic |
| CAGACAAACTTGAGGAAGGA+AGG | 0.571151 | tig0023376:+36654 | None:intergenic |
| GGATCACCATTGGACATGTA+GGG | 0.572870 | tig0023376:-34404 | Msa1408180:three_prime_UTR |
| TTAAGGAAGAAGAAACAAGT+GGG | 0.574089 | tig0023376:+40238 | None:intergenic |
| CCATTTGTATGGCTTCAGCC+CGG | 0.574553 | tig0023376:+38801 | None:intergenic |
| ATTTGTAAATATGTCCAAGA+AGG | 0.574783 | tig0023376:-35440 | Msa1408180:CDS |
| CAAATAAGATCTCCTTATTG+TGG | 0.574828 | tig0023376:+36846 | None:intergenic |
| ACCAGCAGAATATACAATCT+CGG | 0.575255 | tig0023376:+39366 | None:intergenic |
| TGATCAGAATGTTATACAGA+TGG | 0.580464 | tig0023376:-37420 | Msa1408180:CDS |
| ACAAATGATTGACAGTGCCC+CGG | 0.582021 | tig0023376:+35457 | None:intergenic |
| GTGAAGGGGAAATGAAAGCA+TGG | 0.582662 | tig0023376:+40192 | None:intergenic |
| GGACGTGATTTCTTATATCA+CGG | 0.585501 | tig0023376:+38285 | None:intergenic |
| TTTCTCGGTTCCCCTTCCCC+CGG | 0.586356 | tig0023376:-34930 | Msa1408180:CDS |
| CGATGCAGCCTCATCAACTA+GGG | 0.594063 | tig0023376:-38750 | Msa1408180:CDS |
| GAAGGATAATGAAGATGCCA+AGG | 0.594611 | tig0023376:-38240 | Msa1408180:intron |
| AGTCTCTTAATGCTTTGGAG+AGG | 0.598854 | tig0023376:-34896 | Msa1408180:CDS |
| GCAAATTATTTGCATAGGAG+CGG | 0.598960 | tig0023376:+38921 | None:intergenic |
| TCAATGTAGAGCTACAACCT+TGG | 0.601421 | tig0023376:+34507 | None:intergenic |
| TAAATATGTCCAAGAAGGCA+CGG | 0.604022 | tig0023376:-35435 | Msa1408180:CDS |
| GAGACCAAGCGAAGAAGAGG+AGG | 0.605749 | tig0023376:+36809 | None:intergenic |
| TGTCTGTGTATCGTGGGAGA+TGG | 0.608558 | tig0023376:+36592 | None:intergenic |
| GTATTGACTTTGGACCATGA+AGG | 0.608695 | tig0023376:-40336 | Msa1408180:five_prime_UTR |
| ATAAATCCCTACATGTCCAA+TGG | 0.609617 | tig0023376:+34398 | None:intergenic |
| AAGGACTGTAAAGGCTCCAA+CGG | 0.613375 | tig0023376:+38680 | None:intergenic |
| CTGTATAACATTCTGATCAG+AGG | 0.615382 | tig0023376:+37424 | None:intergenic |
| TGCAAGAAGAGAGTGGTCAA+AGG | 0.617280 | tig0023376:-40369 | Msa1408180:five_prime_UTR |
| GGATCAACATAGAGAATGGG+TGG | 0.618589 | tig0023376:-38357 | Msa1408180:CDS |
| CTATTGGAGGCTGATGCAGT+GGG | 0.619490 | tig0023376:-35098 | Msa1408180:CDS |
| CCATAACATCGCCCGTAATG+GGG | 0.620094 | tig0023376:+38651 | None:intergenic |
| AACTGGTGTCTGTGTATCGT+GGG | 0.624756 | tig0023376:+36586 | None:intergenic |
| CCAGCATGCAAAGGATGACA+AGG | 0.625405 | tig0023376:+38264 | None:intergenic |
| AATAGCGTAGTTGAATGTCT+CGG | 0.625479 | tig0023376:+39243 | None:intergenic |
| GTTCCTGATATATGAAGCTG+AGG | 0.627010 | tig0023376:+36451 | None:intergenic |
| TAGGCAAAATGATGATTCCA+CGG | 0.628178 | tig0023376:+35118 | None:intergenic |
| TGCTGGTAACTATGGGACCA+AGG | 0.628279 | tig0023376:-34524 | Msa1408180:three_prime_UTR |
| TATCCTTCACCAGCATGCAA+AGG | 0.628279 | tig0023376:+38255 | None:intergenic |
| TCTAAAGTAATGAAAGTCAG+AGG | 0.629710 | tig0023376:+38545 | None:intergenic |
| TGTTCAGACAAACTTGAGGA+AGG | 0.629932 | tig0023376:+36650 | None:intergenic |
| CGATGTTATGGTTGACCCTG+TGG | 0.631793 | tig0023376:-38639 | Msa1408180:CDS |
| TTGATTCGATTAATGTACTG+AGG | 0.635484 | tig0023376:-34711 | Msa1408180:three_prime_UTR |
| GCCCTGATGAAGTTTCCACA+GGG | 0.642472 | tig0023376:+38624 | None:intergenic |
| AGTCCAATGCCAAAGCGCAA+GGG | 0.643668 | tig0023376:-35200 | Msa1408180:CDS |
| GATTTGTTAAGAGAATACAT+TGG | 0.644649 | tig0023376:-37545 | Msa1408180:CDS |
| GTCCCATAGTTACCAGCATG+AGG | 0.645429 | tig0023376:+34529 | None:intergenic |
| TAAAACTATCCTTATTCACA+AGG | 0.647242 | tig0023376:+39338 | None:intergenic |
| AAGTTGGTAGAAAATTCTGT+TGG | 0.648592 | tig0023376:-35392 | Msa1408180:CDS |
| TAACCAATACTAGAACTGAT+GGG | 0.650199 | tig0023376:+35711 | None:intergenic |
| AAGGAGATCTTATTTGACAG+TGG | 0.654554 | tig0023376:-36839 | Msa1408180:CDS |
| CAACACAAGCGAGATTAGCA+GGG | 0.657662 | tig0023376:-39107 | Msa1408180:CDS |
| TAGACATTGCAAGAAGAGAG+TGG | 0.658480 | tig0023376:-40376 | Msa1408180:five_prime_UTR |
| AAACTGGTGTCTGTGTATCG+TGG | 0.659248 | tig0023376:+36585 | None:intergenic |
| GAAAGGCCTGATGTAGCCAA+AGG | 0.663513 | tig0023376:+39070 | None:intergenic |
| GAGATTGTATATTCTGCTGG+TGG | 0.665523 | tig0023376:-39364 | Msa1408180:CDS |
| TATCAGGAACAAGCTAAGAG+AGG | 0.670493 | tig0023376:-36438 | Msa1408180:intron |
| AGAATGTAGCAAGAAGAGCA+AGG | 0.671592 | tig0023376:-39176 | Msa1408180:CDS |
| TACATGTTCAGACAAACTTG+AGG | 0.676181 | tig0023376:+36646 | None:intergenic |
| ATTTAAGGCAGCCATATCTG+AGG | 0.678912 | tig0023376:-38993 | Msa1408180:CDS |
| TCAGTGGCTTTATGATGCCG+GGG | 0.680655 | tig0023376:-35474 | Msa1408180:CDS |
| ACCCTGTGGAAACTTCATCA+GGG | 0.681271 | tig0023376:-38625 | Msa1408180:CDS |
| AATTGAAAATGAGAAAGACC+GGG | 0.681485 | tig0023376:-38819 | Msa1408180:CDS |
| AGCACTAGCAAAGACTCTTG+GGG | 0.684963 | tig0023376:-35075 | Msa1408180:CDS |
| TTCCTGATATATGAAGCTGA+GGG | 0.686175 | tig0023376:+36452 | None:intergenic |
| TTCAAGATAAACCTGCGGAG+AGG | 0.687813 | tig0023376:+37363 | None:intergenic |
| TCAAATGTACAAGATATTTG+GGG | 0.690097 | tig0023376:+34356 | None:intergenic |
| GGACTTGAAATGATTCGACA+AGG | 0.693095 | tig0023376:-36716 | Msa1408180:CDS |
| CTGTTGGAATTACAAAAGAG+CGG | 0.703567 | tig0023376:-38880 | Msa1408180:CDS |
| GATGGGGAAAAGCTACAGAG+TGG | 0.711474 | tig0023376:-34999 | Msa1408180:CDS |
| GGTGACTATGTCTAGCAGTG+AGG | 0.713604 | tig0023376:-37495 | Msa1408180:CDS |
| GCCGGATGCTTAGTTCATGG+TGG | 0.716891 | tig0023376:-35149 | Msa1408180:CDS |
| TTAGTTGACTTAACTCAGCG+GGG | 0.718603 | tig0023376:-34819 | Msa1408180:CDS |
| GCAGCAGCATGATATTGATG+TGG | 0.721463 | tig0023376:-34554 | Msa1408180:three_prime_UTR |
| CTTTAGTTGACTTAACTCAG+CGG | 0.730540 | tig0023376:-34821 | Msa1408180:CDS |
| GAGAGATAAACATAAGAACA+CGG | 0.737988 | tig0023376:+40260 | None:intergenic |
| AAGTTCAACAGATCACTCAG+TGG | 0.761886 | tig0023376:-35490 | Msa1408180:CDS |
| TCATGGTGGTGTATGCACCG+TGG | 0.772961 | tig0023376:-35135 | Msa1408180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATAATAAAGAATAAG+GGG | + | tig0023376:36886-36905 | None:intergenic | 10.0% |
| !! | TTAAATTTAAGAAACATATC+CGG | + | tig0023376:34816-34835 | None:intergenic | 15.0% |
| !! | CTAAATAATATCTATCAATA+GGG | - | tig0023376:34994-35013 | Msa1408180:CDS | 15.0% |
| !! | AATATGTAAGATAAAACTAA+AGG | + | tig0023376:36485-36504 | None:intergenic | 15.0% |
| !!! | GTATTGATTGAATTTAAAAA+GGG | - | tig0023376:37376-37395 | Msa1408180:CDS | 15.0% |
| !!! | ACATTAAAATCTATTTTGTA+AGG | + | tig0023376:37529-37548 | None:intergenic | 15.0% |
| !!! | TAATGTTAAATTTTTCAACT+AGG | - | tig0023376:37543-37562 | Msa1408180:CDS | 15.0% |
| !!! | GTTTAAATTTTGTTTATCTT+TGG | + | tig0023376:38402-38421 | None:intergenic | 15.0% |
| !! | AAAAATTACATTTCTAATGA+AGG | - | tig0023376:38625-38644 | Msa1408180:CDS | 15.0% |
| !! | AAAAAACTCAAATGTAACTA+TGG | + | tig0023376:34555-34574 | None:intergenic | 20.0% |
| !! | TAAATTTAACGCCTAAAAAA+CGG | + | tig0023376:34589-34608 | None:intergenic | 20.0% |
| !! | AGAAATGAAAACATTTGATT+TGG | + | tig0023376:34628-34647 | None:intergenic | 20.0% |
| !! | TTAAACTAAACATCAATTGT+TGG | - | tig0023376:34832-34851 | Msa1408180:CDS | 20.0% |
| !!! | TTATTTAGGATACTAAACTA+AGG | + | tig0023376:34982-35001 | None:intergenic | 20.0% |
| !! | CCTATTGATAGATATTATTT+AGG | + | tig0023376:34996-35015 | None:intergenic | 20.0% |
| !! | CCTAAATAATATCTATCAAT+AGG | - | tig0023376:34993-35012 | Msa1408180:CDS | 20.0% |
| !!! | TGATTTTCTTTTATTCTTAC+TGG | - | tig0023376:35028-35047 | Msa1408180:CDS | 20.0% |
| !! | AATTAAAGATGGAAAGAAAT+TGG | - | tig0023376:35446-35465 | Msa1408180:CDS | 20.0% |
| !!! | TTTGATTTCTTCAATTATTC+CGG | + | tig0023376:35607-35626 | None:intergenic | 20.0% |
| !! | GAATAATTGAAGAAATCAAA+AGG | - | tig0023376:35607-35626 | Msa1408180:CDS | 20.0% |
| !! | AATAATTTGATCCATTTGTA+TGG | + | tig0023376:35862-35881 | None:intergenic | 20.0% |
| !! | TGCAAAATATCATTATGTAA+TGG | - | tig0023376:36592-36611 | Msa1408180:CDS | 20.0% |
| !! | TTTCACATATTTCATATAGA+AGG | - | tig0023376:36679-36698 | Msa1408180:CDS | 20.0% |
| !!! | AATTCTATTTCTTTAAGCAT+TGG | + | tig0023376:36713-36732 | None:intergenic | 20.0% |
| !! | AATGCTTAAAGAAATAGAAT+TGG | - | tig0023376:36712-36731 | Msa1408180:CDS | 20.0% |
| !!! | TATTATTTTTTTAGGTCAAG+AGG | + | tig0023376:36755-36774 | None:intergenic | 20.0% |
| !!! | TGTTGTGCTATTATTTTTTT+AGG | + | tig0023376:36763-36782 | None:intergenic | 20.0% |
| !! | TTCTCTTAACAAATCATATT+CGG | + | tig0023376:37099-37118 | None:intergenic | 20.0% |
| !!! | GGTATTGATTGAATTTAAAA+AGG | - | tig0023376:37375-37394 | Msa1408180:CDS | 20.0% |
| !!! | CTATCTACTTTAAAGAAAAA+TGG | - | tig0023376:37912-37931 | Msa1408180:intron | 20.0% |
| !!! | ATTAGAAATGTAATTTTTGC+AGG | + | tig0023376:38623-38642 | None:intergenic | 20.0% |
| !! | TATTATCAAGGTTTATAGTA+AGG | + | tig0023376:38866-38885 | None:intergenic | 20.0% |
| !!! | TAAGTGTTTTCATTCAATTT+AGG | - | tig0023376:40203-40222 | Msa1408180:five_prime_UTR | 20.0% |
| !!! | TAAAAGAGTTGTATTGACTT+TGG | - | tig0023376:34303-34322 | Msa1408180:three_prime_UTR | 25.0% |
| ! | AAGTCTCTATACAATATTTC+CGG | + | tig0023376:34346-34365 | None:intergenic | 25.0% |
| ! | AGAAACATAAACCAGAATTA+AGG | + | tig0023376:34431-34450 | None:intergenic | 25.0% |
| !! | ATTTTCATTGTTGGAAAAGA+AGG | + | tig0023376:34721-34740 | None:intergenic | 25.0% |
| ! | GTTATTATACTTATACATGC+CGG | - | tig0023376:34794-34813 | Msa1408180:CDS | 25.0% |
| ! | TAATATCTATCAATAGGGAA+TGG | - | tig0023376:34999-35018 | Msa1408180:CDS | 25.0% |
| !! | CTTTTATTCTTACTGGATTT+AGG | - | tig0023376:35035-35054 | Msa1408180:CDS | 25.0% |
| ! | ACAAAAACAGTAGAAAATGT+TGG | + | tig0023376:35140-35159 | None:intergenic | 25.0% |
| !!! | TTTCTACTGTTTTTGTTTCA+TGG | - | tig0023376:35144-35163 | Msa1408180:CDS | 25.0% |
| !!! | TTCTACTGTTTTTGTTTCAT+GGG | - | tig0023376:35145-35164 | Msa1408180:CDS | 25.0% |
| !!! | GAAAAAGGGATTTTATTTTC+TGG | - | tig0023376:35169-35188 | Msa1408180:CDS | 25.0% |
| ! | TAAAACTATCCTTATTCACA+AGG | + | tig0023376:35314-35333 | None:intergenic | 25.0% |
| !!! | TGTGAATAAGGATAGTTTTA+AGG | - | tig0023376:35314-35333 | Msa1408180:CDS | 25.0% |
| ! | AAGAAGCAAATTATTTGCAT+AGG | + | tig0023376:35736-35755 | None:intergenic | 25.0% |
| ! | AAATTGAAAATGAGAAAGAC+CGG | - | tig0023376:35829-35848 | Msa1408180:intron | 25.0% |
| !! | AAATTATTGCTTTGTTGGAA+AGG | - | tig0023376:35874-35893 | Msa1408180:intron | 25.0% |
| !! | TTCTTCTATTGATTGTTTCA+AGG | + | tig0023376:36156-36175 | None:intergenic | 25.0% |
| ! | TGAAACAATCAATAGAAGAA+TGG | - | tig0023376:36156-36175 | Msa1408180:intron | 25.0% |
| ! | ATGTTACAAATTAAGTACCT+TGG | + | tig0023376:36429-36448 | None:intergenic | 25.0% |
| ! | ATGTTTATTGTGTAAAACAG+AGG | - | tig0023376:36506-36525 | Msa1408180:CDS | 25.0% |
| ! | AAAATAATAGCACAACAGAT+TGG | - | tig0023376:36766-36785 | Msa1408180:CDS | 25.0% |
| ! | TATGAAATTGTGCATAGTTA+TGG | + | tig0023376:36941-36960 | None:intergenic | 25.0% |
| !!! | GATTTGTTAAGAGAATACAT+TGG | - | tig0023376:37104-37123 | Msa1408180:intron | 25.0% |
| ! | ATAAAGAGACTCAAAATTGA+AGG | + | tig0023376:37312-37331 | None:intergenic | 25.0% |
| ! | AATGATCGATACACTATAAT+TGG | - | tig0023376:37354-37373 | Msa1408180:intron | 25.0% |
| ! | ATTATAAACACTACCTATGT+AGG | + | tig0023376:37432-37451 | None:intergenic | 25.0% |
| ! | CAGTTTAAGTAAATTAATCG+AGG | - | tig0023376:37606-37625 | Msa1408180:CDS | 25.0% |
| ! | GCATCAATATCATTTACAAA+TGG | - | tig0023376:37633-37652 | Msa1408180:CDS | 25.0% |
| ! | AATGCCTTTATTAAAAAGTC+AGG | - | tig0023376:37673-37692 | Msa1408180:intron | 25.0% |
| ! | ATGCCTTTATTAAAAAGTCA+GGG | - | tig0023376:37674-37693 | Msa1408180:intron | 25.0% |
| ! | AAAAAAACAGGTTAAGCAAA+AGG | + | tig0023376:37717-37736 | None:intergenic | 25.0% |
| !!! | TAACCTGTTTTTTTTAATGC+AGG | - | tig0023376:37723-37742 | Msa1408180:intron | 25.0% |
| ! | TAATGATGTTGAGATGAAAT+TGG | - | tig0023376:37866-37885 | Msa1408180:intron | 25.0% |
| ! | AAGGTTAAAAACATCTTCAT+CGG | + | tig0023376:38102-38121 | None:intergenic | 25.0% |
| !!! | AATATTTTTAGCTAGCATCA+AGG | - | tig0023376:38448-38467 | Msa1408180:CDS | 25.0% |
| ! | GCAATGACTATTAAGTATAA+AGG | - | tig0023376:38473-38492 | Msa1408180:CDS | 25.0% |
| ! | CTATTAAGTATAAAGGATTG+TGG | - | tig0023376:38480-38499 | Msa1408180:CDS | 25.0% |
| !!! | TACAGATATTTGGTTTTAGA+TGG | + | tig0023376:38563-38582 | None:intergenic | 25.0% |
| !!! | ATGCTTGTTTTACAGATATT+TGG | + | tig0023376:38573-38592 | None:intergenic | 25.0% |
| !! | AAATGTAATTTTTGCAGGAA+GGG | + | tig0023376:38618-38637 | None:intergenic | 25.0% |
| ! | TAAGTAGACTAATTTAGCTA+TGG | + | tig0023376:38905-38924 | None:intergenic | 25.0% |
| ! | ATTTGTAAATATGTCCAAGA+AGG | - | tig0023376:39209-39228 | Msa1408180:CDS | 25.0% |
| !!! | GCTTTTAGAAAATTGAGTTA+GGG | + | tig0023376:39414-39433 | None:intergenic | 25.0% |
| !!! | AGCTTTTAGAAAATTGAGTT+AGG | + | tig0023376:39415-39434 | None:intergenic | 25.0% |
| ! | CTCTTCTAACTTTAATTGAT+GGG | - | tig0023376:39633-39652 | Msa1408180:intron | 25.0% |
| ! | TCTTCTAACTTTAATTGATG+GGG | - | tig0023376:39634-39653 | Msa1408180:intron | 25.0% |
| ! | CCACTAATAATAAGATTTCT+CGG | - | tig0023376:39704-39723 | Msa1408180:intron | 25.0% |
| ! | TTAGAGTTCAAACAGAAATA+TGG | - | tig0023376:39788-39807 | Msa1408180:intron | 25.0% |
| ! | TCAAATGTACAAGATATTTG+GGG | + | tig0023376:40296-40315 | None:intergenic | 25.0% |
| ! | CTCAAATGTACAAGATATTT+GGG | + | tig0023376:40297-40316 | None:intergenic | 25.0% |
| ! | TTGTACATTTGAGGATTTAT+AGG | - | tig0023376:40304-40323 | Msa1408180:five_prime_UTR | 25.0% |
| AGTCTCTATACAATATTTCC+GGG | + | tig0023376:34345-34364 | None:intergenic | 30.0% | |
| GAGAGATAAACATAAGAACA+CGG | + | tig0023376:34392-34411 | None:intergenic | 30.0% | |
| TTAAGGAAGAAGAAACAAGT+GGG | + | tig0023376:34414-34433 | None:intergenic | 30.0% | |
| ATTAAGGAAGAAGAAACAAG+TGG | + | tig0023376:34415-34434 | None:intergenic | 30.0% | |
| TGTTTCTTCTTCCTTAATTC+TGG | - | tig0023376:34417-34436 | Msa1408180:three_prime_UTR | 30.0% | |
| !!! | TAGTCATCTTACCGTTTTTT+AGG | - | tig0023376:34575-34594 | Msa1408180:three_prime_UTR | 30.0% |
| ! | ATCTTGCTCATTTTCATTGT+TGG | + | tig0023376:34730-34749 | None:intergenic | 30.0% |
| AACAATGAAAATGAGCAAGA+TGG | - | tig0023376:34729-34748 | Msa1408180:exon | 30.0% | |
| ATCCAACCAAGAAAATTACA+CGG | + | tig0023376:34766-34785 | None:intergenic | 30.0% | |
| !!! | TGACTTTTTTATTCTGAAGC+TGG | - | tig0023376:34868-34887 | Msa1408180:CDS | 30.0% |
| ! | ATTTGAAGTTGAACTGTAAC+TGG | - | tig0023376:35059-35078 | Msa1408180:CDS | 30.0% |
| !! | TTTTGTTTCATGGGAGAAAA+AGG | - | tig0023376:35154-35173 | Msa1408180:CDS | 30.0% |
| TTTGTTTCATGGGAGAAAAA+GGG | - | tig0023376:35155-35174 | Msa1408180:CDS | 30.0% | |
| AGAATATACAATCTCGGAAA+CGG | + | tig0023376:35280-35299 | None:intergenic | 30.0% | |
| !!! | TTGCTCAACTGTTTTAAGAT+AGG | + | tig0023376:35369-35388 | None:intergenic | 30.0% |
| AAAACAGTTGAGCAAAGAAA+AGG | - | tig0023376:35374-35393 | Msa1408180:CDS | 30.0% | |
| TAATATCTCTTCCTCAGATA+TGG | + | tig0023376:35670-35689 | None:intergenic | 30.0% | |
| AATTGAAAATGAGAAAGACC+GGG | - | tig0023376:35830-35849 | Msa1408180:intron | 30.0% | |
| GGATCAAATTATTGCTTTGT+TGG | - | tig0023376:35869-35888 | Msa1408180:intron | 30.0% | |
| ! | TCTAAAGTAATGAAAGTCAG+AGG | + | tig0023376:36107-36126 | None:intergenic | 30.0% |
| !!! | GATTGTTTCAAGGTTTTGTT+AGG | + | tig0023376:36146-36165 | None:intergenic | 30.0% |
| TCAAGATTTGTGTGAACAAA+AGG | - | tig0023376:36271-36290 | Msa1408180:intron | 30.0% | |
| AAAAGGATCAACATAGAGAA+TGG | - | tig0023376:36288-36307 | Msa1408180:intron | 30.0% | |
| AAAGGATCAACATAGAGAAT+GGG | - | tig0023376:36289-36308 | Msa1408180:intron | 30.0% | |
| !!! | GGTTTTTTTCAGCAAGAATT+TGG | + | tig0023376:36346-36365 | None:intergenic | 30.0% |
| ATTTCATATAGAAGGACATG+TGG | - | tig0023376:36687-36706 | Msa1408180:CDS | 30.0% | |
| TTGCATGTTTAATTGCATGA+TGG | + | tig0023376:36911-36930 | None:intergenic | 30.0% | |
| AAATTGTGCATAGTTATGGA+GGG | + | tig0023376:36937-36956 | None:intergenic | 30.0% | |
| GAATACATTGGAAAAGTTCA+AGG | - | tig0023376:37116-37135 | Msa1408180:intron | 30.0% | |
| TGATCAGAATGTTATACAGA+TGG | - | tig0023376:37229-37248 | Msa1408180:intron | 30.0% | |
| AAAAACTGTAGAGTAGAACA+TGG | + | tig0023376:37571-37590 | None:intergenic | 30.0% | |
| ! | CATCCCTGACTTTTTAATAA+AGG | + | tig0023376:37680-37699 | None:intergenic | 30.0% |
| CTTTATTAAAAAGTCAGGGA+TGG | - | tig0023376:37678-37697 | Msa1408180:intron | 30.0% | |
| GTTCCTGCATTAAAAAAAAC+AGG | + | tig0023376:37729-37748 | None:intergenic | 30.0% | |
| AGATGATGTGAAGATGATTA+TGG | - | tig0023376:37749-37768 | Msa1408180:intron | 30.0% | |
| GATGATTATGGTCAAAATGT+TGG | - | tig0023376:37761-37780 | Msa1408180:intron | 30.0% | |
| CAAATAAGATCTCCTTATTG+TGG | + | tig0023376:37806-37825 | None:intergenic | 30.0% | |
| ! | TAGATTCTGAAGAGCTTTAA+GGG | + | tig0023376:37895-37914 | None:intergenic | 30.0% |
| ! | ATAGATTCTGAAGAGCTTTA+AGG | + | tig0023376:37896-37915 | None:intergenic | 30.0% |
| TGTAGCTAACTAGAGAAAAA+AGG | + | tig0023376:38121-38140 | None:intergenic | 30.0% | |
| ATAATATATTGTCGCACATC+AGG | + | tig0023376:38149-38168 | None:intergenic | 30.0% | |
| GACATAAGGAATAAAATGTC+TGG | + | tig0023376:38172-38191 | None:intergenic | 30.0% | |
| ATTGTGGTTCTTAGTTTCAT+TGG | - | tig0023376:38496-38515 | Msa1408180:CDS | 30.0% | |
| !! | AAACTGTTTCTGTGATCAAA+AGG | + | tig0023376:38539-38558 | None:intergenic | 30.0% |
| ! | AATGTAATTTTTGCAGGAAG+GGG | + | tig0023376:38617-38636 | None:intergenic | 30.0% |
| ! | GAAATGTAATTTTTGCAGGA+AGG | + | tig0023376:38619-38638 | None:intergenic | 30.0% |
| TAACCAATACTAGAACTGAT+GGG | + | tig0023376:38941-38960 | None:intergenic | 30.0% | |
| TTAACCAATACTAGAACTGA+TGG | + | tig0023376:38942-38961 | None:intergenic | 30.0% | |
| !! | AGAAGAAATTGTTTCTGCTA+TGG | - | tig0023376:39115-39134 | Msa1408180:CDS | 30.0% |
| !! | GAAGAAATTGTTTCTGCTAT+GGG | - | tig0023376:39116-39135 | Msa1408180:CDS | 30.0% |
| ! | TTTCTACCAACTTACTCTTT+TGG | + | tig0023376:39250-39269 | None:intergenic | 30.0% |
| !! | AAGTTGGTAGAAAATTCTGT+TGG | - | tig0023376:39257-39276 | Msa1408180:CDS | 30.0% |
| ! | TTTTACAGTTCCAACAAACT+TGG | - | tig0023376:39292-39311 | Msa1408180:CDS | 30.0% |
| AACAGTTATGATCCCAATTT+CGG | + | tig0023376:39336-39355 | None:intergenic | 30.0% | |
| GCTCTTCTAACTTTAATTGA+TGG | - | tig0023376:39632-39651 | Msa1408180:intron | 30.0% | |
| CCGAGAAATCTTATTATTAG+TGG | + | tig0023376:39707-39726 | None:intergenic | 30.0% | |
| TAATGGTAGCATTAAATCCT+TGG | - | tig0023376:39853-39872 | Msa1408180:intron | 30.0% | |
| ! | TTGATTCGATTAATGTACTG+AGG | - | tig0023376:39938-39957 | Msa1408180:intron | 30.0% |
| !! | TACATTGAGCTATTTCTTCA+TGG | - | tig0023376:40157-40176 | Msa1408180:intron | 30.0% |
| TTTAGGCTACTGTTGTATTA+AGG | - | tig0023376:40220-40239 | Msa1408180:five_prime_UTR | 30.0% | |
| CCTCAAATGTACAAGATATT+TGG | + | tig0023376:40298-40317 | None:intergenic | 30.0% | |
| CCAAATATCTTGTACATTTG+AGG | - | tig0023376:40295-40314 | Msa1408180:five_prime_UTR | 30.0% | |
| ! | GAACACAATCATTCTAGAAA+GGG | + | tig0023376:40361-40380 | None:intergenic | 30.0% |
| ! | AGAACACAATCATTCTAGAA+AGG | + | tig0023376:40362-40381 | None:intergenic | 30.0% |
| ! | TCATTCCCGTGTAATTTTCT+TGG | - | tig0023376:34757-34776 | Msa1408180:CDS | 35.0% |
| TCCAACCAAGAAAATTACAC+GGG | + | tig0023376:34765-34784 | None:intergenic | 35.0% | |
| AATTCTCTGTCTACTCTCTT+GGG | - | tig0023376:34931-34950 | Msa1408180:CDS | 35.0% | |
| AAGTTGAACTGTAACTGGTA+TGG | - | tig0023376:35064-35083 | Msa1408180:CDS | 35.0% | |
| CTGTTTGCAACTTCTGATTA+AGG | + | tig0023376:35097-35116 | None:intergenic | 35.0% | |
| TTGTGCCACAAAAAAGACAA+TGG | - | tig0023376:35197-35216 | Msa1408180:CDS | 35.0% | |
| ACCAGCAGAATATACAATCT+CGG | + | tig0023376:35286-35305 | None:intergenic | 35.0% | |
| AATAGCGTAGTTGAATGTCT+CGG | + | tig0023376:35409-35428 | None:intergenic | 35.0% | |
| CTGGATCGTGAAATTAAAGA+TGG | - | tig0023376:35435-35454 | Msa1408180:CDS | 35.0% | |
| AAGGTTATGTGACAATATGC+AGG | - | tig0023376:35626-35645 | Msa1408180:CDS | 35.0% | |
| GCAAATTATTTGCATAGGAG+CGG | + | tig0023376:35731-35750 | None:intergenic | 35.0% | |
| CTGTTGGAATTACAAAAGAG+CGG | - | tig0023376:35769-35788 | Msa1408180:intron | 35.0% | |
| ! | AGAGAAGTGCAATTGAAAAG+TGG | - | tig0023376:36057-36076 | Msa1408180:intron | 35.0% |
| ! | ATTGAAAAGTGGTTTGCAGA+AGG | - | tig0023376:36068-36087 | Msa1408180:intron | 35.0% |
| !!! | CTTTAGACACGTTGATTTTG+AGG | - | tig0023376:36120-36139 | Msa1408180:intron | 35.0% |
| GCAAGAATTTGGATAAGAAC+AGG | + | tig0023376:36335-36354 | None:intergenic | 35.0% | |
| GGACGTGATTTCTTATATCA+CGG | + | tig0023376:36367-36386 | None:intergenic | 35.0% | |
| ATGCTTGTAGGCTTGATTTA+GGG | + | tig0023376:36556-36575 | None:intergenic | 35.0% | |
| AATGCTTGTAGGCTTGATTT+AGG | + | tig0023376:36557-36576 | None:intergenic | 35.0% | |
| CCTACAAGCATTTACAGATA+GGG | - | tig0023376:36565-36584 | Msa1408180:CDS | 35.0% | |
| ! | AATAGCACAACAGATTGGTT+AGG | - | tig0023376:36771-36790 | Msa1408180:CDS | 35.0% |
| ! | AGTGTTTTGTCTGACTGTAA+AGG | + | tig0023376:36798-36817 | None:intergenic | 35.0% |
| GAAATTGTGCATAGTTATGG+AGG | + | tig0023376:36938-36957 | None:intergenic | 35.0% | |
| CAACATTTGCAATTCTTTCC+TGG | + | tig0023376:36992-37011 | None:intergenic | 35.0% | |
| TCAAGGTTGCATACTACTAT+TGG | - | tig0023376:37133-37152 | Msa1408180:intron | 35.0% | |
| CTGTATAACATTCTGATCAG+AGG | + | tig0023376:37228-37247 | None:intergenic | 35.0% | |
| CTACCTATGTAGGTACTTTA+GGG | + | tig0023376:37422-37441 | None:intergenic | 35.0% | |
| ACTACCTATGTAGGTACTTT+AGG | + | tig0023376:37423-37442 | None:intergenic | 35.0% | |
| AAACCATCTTAATCGCACTA+GGG | - | tig0023376:37490-37509 | Msa1408180:CDS | 35.0% | |
| !! | TACAGTTTTTGAGAGCTTCA+AGG | - | tig0023376:37581-37600 | Msa1408180:CDS | 35.0% |
| ! | AAGGAGATCTTATTTGACAG+TGG | - | tig0023376:37810-37829 | Msa1408180:intron | 35.0% |
| TACATGTTCAGACAAACTTG+AGG | + | tig0023376:38006-38025 | None:intergenic | 35.0% | |
| GCAGCAAGTTGCATAATTAT+GGG | + | tig0023376:38032-38051 | None:intergenic | 35.0% | |
| TGCAGCAAGTTGCATAATTA+TGG | + | tig0023376:38033-38052 | None:intergenic | 35.0% | |
| TTCCTGATATATGAAGCTGA+GGG | + | tig0023376:38200-38219 | None:intergenic | 35.0% | |
| ! | CGACATTGAATGACTACTTT+TGG | + | tig0023376:38305-38324 | None:intergenic | 35.0% |
| TGGATGTGGAAGAACTTAAA+TGG | + | tig0023376:38362-38381 | None:intergenic | 35.0% | |
| ! | ATGTAATTTTTGCAGGAAGG+GGG | + | tig0023376:38616-38635 | None:intergenic | 35.0% |
| ! | AGTCGTTGGAAACAATTTTC+TGG | - | tig0023376:38655-38674 | Msa1408180:CDS | 35.0% |
| TTACCACACAAGACAGAAAA+TGG | + | tig0023376:38812-38831 | None:intergenic | 35.0% | |
| CTGATTCACATGCTTTAGTA+CGG | + | tig0023376:39048-39067 | None:intergenic | 35.0% | |
| ! | TGAGTGATCTGTTGAACTTT+TGG | + | tig0023376:39158-39177 | None:intergenic | 35.0% |
| TAAATATGTCCAAGAAGGCA+CGG | - | tig0023376:39214-39233 | Msa1408180:CDS | 35.0% | |
| AGATCTCCAAAAGAGTAAGT+TGG | - | tig0023376:39241-39260 | Msa1408180:CDS | 35.0% | |
| ! | TTTTGCCATTCCAAGTTTGT+TGG | + | tig0023376:39305-39324 | None:intergenic | 35.0% |
| TTAGTACAGTTGCTTGAAAG+TGG | - | tig0023376:39356-39375 | Msa1408180:CDS | 35.0% | |
| TAGGCAAAATGATGATTCCA+CGG | + | tig0023376:39534-39553 | None:intergenic | 35.0% | |
| ! | GGAATCATCATTTTGCCTAT+TGG | - | tig0023376:39535-39554 | Msa1408180:five_prime_UTR | 35.0% |
| ! | ATCATCATTTTGCCTATTGG+AGG | - | tig0023376:39538-39557 | Msa1408180:five_prime_UTR | 35.0% |
| GGAAAAGTCTCTTAATGCTT+TGG | - | tig0023376:39748-39767 | Msa1408180:intron | 35.0% | |
| TCTGTTTGAACTCTAATAGC+CGG | + | tig0023376:39784-39803 | None:intergenic | 35.0% | |
| ! | CTTTAGTTGACTTAACTCAG+CGG | - | tig0023376:39828-39847 | Msa1408180:intron | 35.0% |
| ! | TTTAGTTGACTTAACTCAGC+GGG | - | tig0023376:39829-39848 | Msa1408180:intron | 35.0% |
| AGTCAAGCTAACTAACCATA+AGG | - | tig0023376:39966-39985 | Msa1408180:intron | 35.0% | |
| CAAGAGAAGATTGAACCTTA+TGG | + | tig0023376:39984-40003 | None:intergenic | 35.0% | |
| GAAATGGTACTCTTTGACAA+AGG | - | tig0023376:40055-40074 | Msa1408180:intron | 35.0% | |
| TATTAAGGTAGGATCACCAT+TGG | - | tig0023376:40235-40254 | Msa1408180:five_prime_UTR | 35.0% | |
| ATAAATCCCTACATGTCCAA+TGG | + | tig0023376:40254-40273 | None:intergenic | 35.0% | |
| TGGACATGTAGGGATTTATT+TGG | - | tig0023376:40255-40274 | Msa1408180:five_prime_UTR | 35.0% | |
| TAGACATTGCAAGAAGAGAG+TGG | - | tig0023376:34273-34292 | Msa1408180:three_prime_UTR | 40.0% | |
| !! | GTATTGACTTTGGACCATGA+AGG | - | tig0023376:34313-34332 | Msa1408180:three_prime_UTR | 40.0% |
| ! | TCCCGTGTAATTTTCTTGGT+TGG | - | tig0023376:34761-34780 | Msa1408180:CDS | 40.0% |
| GAATTCTCTGTCTACTCTCT+TGG | - | tig0023376:34930-34949 | Msa1408180:CDS | 40.0% | |
| !!! | GAGAGCCATTGTCTTTTTTG+TGG | + | tig0023376:35205-35224 | None:intergenic | 40.0% |
| TCCGAGATTGTATATTCTGC+TGG | - | tig0023376:35282-35301 | Msa1408180:CDS | 40.0% | |
| GAGATTGTATATTCTGCTGG+TGG | - | tig0023376:35285-35304 | Msa1408180:CDS | 40.0% | |
| GACATTCAACTACGCTATTG+AGG | - | tig0023376:35410-35429 | Msa1408180:CDS | 40.0% | |
| AGAATGTAGCAAGAAGAGCA+AGG | - | tig0023376:35473-35492 | Msa1408180:CDS | 40.0% | |
| GTGCTTCAAGCGCTTAAAAA+CGG | + | tig0023376:35523-35542 | None:intergenic | 40.0% | |
| CTTCAATTATTCCGGCAGAA+AGG | + | tig0023376:35599-35618 | None:intergenic | 40.0% | |
| TATGCAGGCAGCTGAATTTA+AGG | - | tig0023376:35641-35660 | Msa1408180:CDS | 40.0% | |
| ! | ATTTAAGGCAGCCATATCTG+AGG | - | tig0023376:35656-35675 | Msa1408180:CDS | 40.0% |
| GAAAATTGAGTCAGCGATAC+AGG | - | tig0023376:35692-35711 | Msa1408180:CDS | 40.0% | |
| !! | TTCCTTTTCCCTAGTTGATG+AGG | + | tig0023376:35910-35929 | None:intergenic | 40.0% |
| TTCGCCAAACGAGATTCTTT+GGG | - | tig0023376:35939-35958 | Msa1408180:intron | 40.0% | |
| GGGCAATAAAAGGACTGTAA+AGG | + | tig0023376:35981-36000 | None:intergenic | 40.0% | |
| ! | GTCCTTTTATTGCCCCATTA+CGG | - | tig0023376:35986-36005 | Msa1408180:intron | 40.0% |
| ! | TCCTTTTATTGCCCCATTAC+GGG | - | tig0023376:35987-36006 | Msa1408180:intron | 40.0% |
| ATGAGAGAGAAAATCCAGTC+TGG | - | tig0023376:36212-36231 | Msa1408180:intron | 40.0% | |
| GAAGGATAATGAAGATGCCA+AGG | - | tig0023376:36409-36428 | Msa1408180:intron | 40.0% | |
| GCCTACAAGCATTTACAGAT+AGG | - | tig0023376:36564-36583 | Msa1408180:CDS | 40.0% | |
| CCCTATCTGTAAATGCTTGT+AGG | + | tig0023376:36568-36587 | None:intergenic | 40.0% | |
| TCTTTCCTGGAAAACCTTCA+GGG | + | tig0023376:36979-36998 | None:intergenic | 40.0% | |
| TTCTTTCCTGGAAAACCTTC+AGG | + | tig0023376:36980-36999 | None:intergenic | 40.0% | |
| AGTCTATTGTCCGTTCTCTT+GGG | - | tig0023376:37024-37043 | Msa1408180:intron | 40.0% | |
| AAGAGATGCAACAGAGTTAC+TGG | - | tig0023376:37190-37209 | Msa1408180:intron | 40.0% | |
| GAAGGTTCAAGATAAACCTG+CGG | + | tig0023376:37294-37313 | None:intergenic | 40.0% | |
| ! | CTATGTAGGTACTTTAGGGA+AGG | + | tig0023376:37418-37437 | None:intergenic | 40.0% |
| ! | CTTCCCTAAAGTACCTACAT+AGG | - | tig0023376:37416-37435 | Msa1408180:CDS | 40.0% |
| GAAACCATCTTAATCGCACT+AGG | - | tig0023376:37489-37508 | Msa1408180:CDS | 40.0% | |
| GGTCAAAATGTTGGCAGAAA+TGG | - | tig0023376:37770-37789 | Msa1408180:intron | 40.0% | |
| GGACTTGAAATGATTCGACA+AGG | - | tig0023376:37933-37952 | Msa1408180:intron | 40.0% | |
| TGTTCAGACAAACTTGAGGA+AGG | + | tig0023376:38002-38021 | None:intergenic | 40.0% | |
| TCGGACTCTAACAATGAAAC+TGG | + | tig0023376:38083-38102 | None:intergenic | 40.0% | |
| GTTCCTGATATATGAAGCTG+AGG | + | tig0023376:38201-38220 | None:intergenic | 40.0% | |
| TATCAGGAACAAGCTAAGAG+AGG | - | tig0023376:38211-38230 | Msa1408180:intron | 40.0% | |
| TCATTCAATGTCGTCAAAGC+AGG | - | tig0023376:38312-38331 | Msa1408180:CDS | 40.0% | |
| GCTAAACAGTAAGATGGATG+TGG | + | tig0023376:38376-38395 | None:intergenic | 40.0% | |
| TGGCATGCTAAACAGTAAGA+TGG | + | tig0023376:38382-38401 | None:intergenic | 40.0% | |
| !! | TCATTGGTACTGATTCCTCA+TGG | - | tig0023376:38512-38531 | Msa1408180:CDS | 40.0% |
| ! | TGTAATTTTTGCAGGAAGGG+GGG | + | tig0023376:38615-38634 | None:intergenic | 40.0% |
| AATTGTTTCCAACGACTCAC+TGG | + | tig0023376:38652-38671 | None:intergenic | 40.0% | |
| ! | CTACCATTTTCTGTCTTGTG+TGG | - | tig0023376:38806-38825 | Msa1408180:CDS | 40.0% |
| !! | TGTGAAGTTGTTTTCTTGCC+TGG | - | tig0023376:39001-39020 | Msa1408180:CDS | 40.0% |
| CTTCATCACAACTTTCTACC+AGG | + | tig0023376:39022-39041 | None:intergenic | 40.0% | |
| CAGATGAAGATTTCAGCATC+TGG | + | tig0023376:39091-39110 | None:intergenic | 40.0% | |
| AAGTTCAACAGATCACTCAG+TGG | - | tig0023376:39159-39178 | Msa1408180:CDS | 40.0% | |
| CAGTTCCAACAAACTTGGAA+TGG | - | tig0023376:39297-39316 | Msa1408180:CDS | 40.0% | |
| ! | AAAAGAGTGCAGCCGAAATT+GGG | - | tig0023376:39321-39340 | Msa1408180:CDS | 40.0% |
| ! | AAGAGACTTTTCCTGCAATC+CGG | + | tig0023376:39741-39760 | None:intergenic | 40.0% |
| !! | AGTCTCTTAATGCTTTGGAG+AGG | - | tig0023376:39753-39772 | Msa1408180:intron | 40.0% |
| !!! | ATGCTTTGGAGAGGATTTTC+CGG | - | tig0023376:39762-39781 | Msa1408180:intron | 40.0% |
| CGCTGAGTTAAGTCAACTAA+AGG | + | tig0023376:39830-39849 | None:intergenic | 40.0% | |
| ! | TTAGTTGACTTAACTCAGCG+GGG | - | tig0023376:39830-39849 | Msa1408180:intron | 40.0% |
| TTCTCTTGATCCTTTGAGTG+TGG | - | tig0023376:39996-40015 | Msa1408180:intron | 40.0% | |
| ! | TTTTGTCATGCCACACTCAA+AGG | + | tig0023376:40009-40028 | None:intergenic | 40.0% |
| TTCCTCATGCTGGTAACTAT+GGG | - | tig0023376:40118-40137 | Msa1408180:intron | 40.0% | |
| TCAATGTAGAGCTACAACCT+TGG | + | tig0023376:40145-40164 | None:intergenic | 40.0% | |
| GGCTACTGTTGTATTAAGGT+AGG | - | tig0023376:40224-40243 | Msa1408180:five_prime_UTR | 40.0% | |
| TGCAAGAAGAGAGTGGTCAA+AGG | - | tig0023376:34280-34299 | Msa1408180:three_prime_UTR | 45.0% | |
| GTGAAGGGGAAATGAAAGCA+TGG | + | tig0023376:34460-34479 | None:intergenic | 45.0% | |
| TGAGAAATAGCTTCCGAAGC+AGG | + | tig0023376:35246-35265 | None:intergenic | 45.0% | |
| ! | TGGTGGTGTCCTTGTGAATA+AGG | - | tig0023376:35302-35321 | Msa1408180:CDS | 45.0% |
| CAACTACGCTATTGAGGTTC+TGG | - | tig0023376:35416-35435 | Msa1408180:CDS | 45.0% | |
| ACAACACAAGCGAGATTAGC+AGG | - | tig0023376:35541-35560 | Msa1408180:CDS | 45.0% | |
| CAACACAAGCGAGATTAGCA+GGG | - | tig0023376:35542-35561 | Msa1408180:CDS | 45.0% | |
| CTTCTTCCTTTGGCTACATC+AGG | - | tig0023376:35573-35592 | Msa1408180:CDS | 45.0% | |
| CTTCTCATTGCAGATGCTGT+TGG | - | tig0023376:35753-35772 | Msa1408180:intron | 45.0% | |
| AGCCTCATCAACTAGGGAAA+AGG | - | tig0023376:35905-35924 | Msa1408180:intron | 45.0% | |
| CTTCGCCAAACGAGATTCTT+TGG | - | tig0023376:35938-35957 | Msa1408180:intron | 45.0% | |
| AGTGCCCAAAGAATCTCGTT+TGG | + | tig0023376:35946-35965 | None:intergenic | 45.0% | |
| AAGGACTGTAAAGGCTCCAA+CGG | + | tig0023376:35972-35991 | None:intergenic | 45.0% | |
| ACCATAACATCGCCCGTAAT+GGG | + | tig0023376:36002-36021 | None:intergenic | 45.0% | |
| AACCATAACATCGCCCGTAA+TGG | + | tig0023376:36003-36022 | None:intergenic | 45.0% | |
| ACCCTGTGGAAACTTCATCA+GGG | - | tig0023376:36024-36043 | Msa1408180:intron | 45.0% | |
| ATCCAGTCTGGAGATGAAGT+TGG | - | tig0023376:36224-36243 | Msa1408180:intron | 45.0% | |
| GGATCAACATAGAGAATGGG+TGG | - | tig0023376:36292-36311 | Msa1408180:intron | 45.0% | |
| ACATAGAGAATGGGTGGTAC+TGG | - | tig0023376:36298-36317 | Msa1408180:intron | 45.0% | |
| TATCCTTCACCAGCATGCAA+AGG | + | tig0023376:36397-36416 | None:intergenic | 45.0% | |
| TTAGGGCTGCTTATTGCATG+AGG | + | tig0023376:36539-36558 | None:intergenic | 45.0% | |
| ATATTGTCCCCTAACCCTGA+AGG | - | tig0023376:36962-36981 | Msa1408180:intron | 45.0% | |
| TGGAAAACCTTCAGGGTTAG+GGG | + | tig0023376:36972-36991 | None:intergenic | 45.0% | |
| CTGGAAAACCTTCAGGGTTA+GGG | + | tig0023376:36973-36992 | None:intergenic | 45.0% | |
| GAGTCTATTGTCCGTTCTCT+TGG | - | tig0023376:37023-37042 | Msa1408180:intron | 45.0% | |
| TTCAAGATAAACCTGCGGAG+AGG | + | tig0023376:37289-37308 | None:intergenic | 45.0% | |
| ACTCCCTAGTGCGATTAAGA+TGG | + | tig0023376:37496-37515 | None:intergenic | 45.0% | |
| AAAAAGTCAGGGATGGTGTG+AGG | - | tig0023376:37685-37704 | Msa1408180:intron | 45.0% | |
| GGAGTCAACAGACCACAATA+AGG | - | tig0023376:37791-37810 | Msa1408180:intron | 45.0% | |
| CAGACAAACTTGAGGAAGGA+AGG | + | tig0023376:37998-38017 | None:intergenic | 45.0% | |
| AACTGGTGTCTGTGTATCGT+GGG | + | tig0023376:38066-38085 | None:intergenic | 45.0% | |
| AAACTGGTGTCTGTGTATCG+TGG | + | tig0023376:38067-38086 | None:intergenic | 45.0% | |
| CTGTGATCAAAAGGACCATG+AGG | + | tig0023376:38530-38549 | None:intergenic | 45.0% | |
| CAAAAGATAACCAACCTGCC+AGG | + | tig0023376:38842-38861 | None:intergenic | 45.0% | |
| ! | GTGCCCATCAGTTCTAGTAT+TGG | - | tig0023376:38935-38954 | Msa1408180:CDS | 45.0% |
| !! | ACTCAGTGGCTTTATGATGC+CGG | - | tig0023376:39173-39192 | Msa1408180:CDS | 45.0% |
| ACAAATGATTGACAGTGCCC+CGG | + | tig0023376:39195-39214 | None:intergenic | 45.0% | |
| GATCTTTATCCGTGCCTTCT+TGG | + | tig0023376:39226-39245 | None:intergenic | 45.0% | |
| ! | CAAAAGAGTGCAGCCGAAAT+TGG | - | tig0023376:39320-39339 | Msa1408180:CDS | 45.0% |
| TTCTCAGCTCAAACAGAAGC+CGG | - | tig0023376:39482-39501 | Msa1408180:five_prime_UTR | 45.0% | |
| ACCACCATGAACTAAGCATC+CGG | + | tig0023376:39504-39523 | None:intergenic | 45.0% | |
| GAGCACTAGCAAAGACTCTT+GGG | - | tig0023376:39573-39592 | Msa1408180:five_prime_UTR | 45.0% | |
| AGCACTAGCAAAGACTCTTG+GGG | - | tig0023376:39574-39593 | Msa1408180:five_prime_UTR | 45.0% | |
| ! | AGAGACTTTTCCTGCAATCC+GGG | + | tig0023376:39740-39759 | None:intergenic | 45.0% |
| ATCCTTGGCAGCTCGAATAT+TGG | - | tig0023376:39868-39887 | Msa1408180:intron | 45.0% | |
| AACCGTTGCAAACTCCAACT+TGG | - | tig0023376:40028-40047 | Msa1408180:intron | 45.0% | |
| ! | GTCCAAGTTGGAGTTTGCAA+CGG | + | tig0023376:40033-40052 | None:intergenic | 45.0% |
| TTGCAAACTCCAACTTGGAC+AGG | - | tig0023376:40033-40052 | Msa1408180:intron | 45.0% | |
| ACTCCAACTTGGACAGGAAA+TGG | - | tig0023376:40039-40058 | Msa1408180:intron | 45.0% | |
| GTACCATTTCCTGTCCAAGT+TGG | + | tig0023376:40045-40064 | None:intergenic | 45.0% | |
| GCAGCAGCATGATATTGATG+TGG | - | tig0023376:40095-40114 | Msa1408180:intron | 45.0% | |
| ATTGATGTGGTTCCTCATGC+TGG | - | tig0023376:40108-40127 | Msa1408180:intron | 45.0% | |
| GTTCCTCATGCTGGTAACTA+TGG | - | tig0023376:40117-40136 | Msa1408180:intron | 45.0% | |
| AGGATCACCATTGGACATGT+AGG | - | tig0023376:40244-40263 | Msa1408180:five_prime_UTR | 45.0% | |
| GGATCACCATTGGACATGTA+GGG | - | tig0023376:40245-40264 | Msa1408180:five_prime_UTR | 45.0% | |
| !! | AAAAAATAAAAATAAGAATA+AGG | + | tig0023376:34664-34683 | None:intergenic | 5.0% |
| !! | AAATTTATAATAAAGAATAA+GGG | + | tig0023376:36887-36906 | None:intergenic | 5.0% |
| !! | TAAATTTATAATAAAGAATA+AGG | + | tig0023376:36888-36907 | None:intergenic | 5.0% |
| !! | TTATAATATAAATATTATCA+AGG | + | tig0023376:38878-38897 | None:intergenic | 5.0% |
| TTTCCGGGAAGACTCCTTCA+TGG | + | tig0023376:34330-34349 | None:intergenic | 50.0% | |
| TTCATTTCCCCTTCACCTCC+AGG | - | tig0023376:34464-34483 | Msa1408180:three_prime_UTR | 50.0% | |
| GCTCTCGATTCATTGACGTC+TGG | - | tig0023376:35219-35238 | Msa1408180:CDS | 50.0% | |
| ATTGACGTCTGGTCCTGCTT+CGG | - | tig0023376:35230-35249 | Msa1408180:CDS | 50.0% | |
| ! | GGCACTTGGTCTTCTTCCTT+TGG | - | tig0023376:35563-35582 | Msa1408180:CDS | 50.0% |
| GAAAGGCCTGATGTAGCCAA+AGG | + | tig0023376:35582-35601 | None:intergenic | 50.0% | |
| CCATTTGTATGGCTTCAGCC+CGG | + | tig0023376:35851-35870 | None:intergenic | 50.0% | |
| !! | CCTAGTTGATGAGGCTGCAT+CGG | + | tig0023376:35901-35920 | None:intergenic | 50.0% |
| CGATGCAGCCTCATCAACTA+GGG | - | tig0023376:35899-35918 | Msa1408180:intron | 50.0% | |
| TTCTTTGGGCACTCAACCGT+TGG | - | tig0023376:35953-35972 | Msa1408180:intron | 50.0% | |
| ! | GCCCGTAATGGGGCAATAAA+AGG | + | tig0023376:35991-36010 | None:intergenic | 50.0% |
| CCATAACATCGCCCGTAATG+GGG | + | tig0023376:36001-36020 | None:intergenic | 50.0% | |
| CGATGTTATGGTTGACCCTG+TGG | - | tig0023376:36010-36029 | Msa1408180:intron | 50.0% | |
| GACCCTGTGGAAACTTCATC+AGG | - | tig0023376:36023-36042 | Msa1408180:intron | 50.0% | |
| GCCCTGATGAAGTTTCCACA+GGG | + | tig0023376:36028-36047 | None:intergenic | 50.0% | |
| TGCCCTGATGAAGTTTCCAC+AGG | + | tig0023376:36029-36048 | None:intergenic | 50.0% | |
| CTCCAACTTCATCTCCAGAC+TGG | + | tig0023376:36229-36248 | None:intergenic | 50.0% | |
| CCAGCATGCAAAGGATGACA+AGG | + | tig0023376:36388-36407 | None:intergenic | 50.0% | |
| CCTTGTCATCCTTTGCATGC+TGG | - | tig0023376:36385-36404 | Msa1408180:intron | 50.0% | |
| CATCCTTTGCATGCTGGTGA+AGG | - | tig0023376:36391-36410 | Msa1408180:intron | 50.0% | |
| GCTGCTTATTGCATGAGGAG+AGG | + | tig0023376:36534-36553 | None:intergenic | 50.0% | |
| CCTGGAAAACCTTCAGGGTT+AGG | + | tig0023376:36974-36993 | None:intergenic | 50.0% | |
| ! | CCTAACCCTGAAGGTTTTCC+AGG | - | tig0023376:36971-36990 | Msa1408180:intron | 50.0% |
| TCGTTTGGGGGAAAGGAAGT+TGG | - | tig0023376:37049-37068 | Msa1408180:intron | 50.0% | |
| TTTGGGGGAAAGGAAGTTGG+CGG | - | tig0023376:37052-37071 | Msa1408180:intron | 50.0% | |
| GGTGACTATGTCTAGCAGTG+AGG | - | tig0023376:37154-37173 | Msa1408180:intron | 50.0% | |
| TGTGAGACCAAGCGAAGAAG+AGG | + | tig0023376:37846-37865 | None:intergenic | 50.0% | |
| TTGAGGAAGGAAGGCTATGC+TGG | + | tig0023376:37989-38008 | None:intergenic | 50.0% | |
| TGTCTGTGTATCGTGGGAGA+TGG | + | tig0023376:38060-38079 | None:intergenic | 50.0% | |
| CGCCCTCAGCTTCATATATC+AGG | - | tig0023376:38195-38214 | Msa1408180:intron | 50.0% | |
| ATGAAGGTCCAGTGAGTCGT+TGG | - | tig0023376:38641-38660 | Msa1408180:CDS | 50.0% | |
| TTGTGTGGTAAGCTAGCACC+TGG | - | tig0023376:38821-38840 | Msa1408180:CDS | 50.0% | |
| CAGCACTTGCTCGAAGACTT+AGG | + | tig0023376:38983-39002 | None:intergenic | 50.0% | |
| !! | CTCAGTGGCTTTATGATGCC+GGG | - | tig0023376:39174-39193 | Msa1408180:CDS | 50.0% |
| !! | TCAGTGGCTTTATGATGCCG+GGG | - | tig0023376:39175-39194 | Msa1408180:CDS | 50.0% |
| AGTCCAATGCCAAAGCGCAA+GGG | - | tig0023376:39449-39468 | Msa1408180:exon | 50.0% | |
| AATCCCTTGCGCTTTGGCAT+TGG | + | tig0023376:39455-39474 | None:intergenic | 50.0% | |
| ! | TGCCAAAGCGCAAGGGATTT+TGG | - | tig0023376:39456-39475 | Msa1408180:five_prime_UTR | 50.0% |
| CACCAAAATCCCTTGCGCTT+TGG | + | tig0023376:39461-39480 | None:intergenic | 50.0% | |
| GAAGCCGGATGCTTAGTTCA+TGG | - | tig0023376:39497-39516 | Msa1408180:five_prime_UTR | 50.0% | |
| CTATTGGAGGCTGATGCAGT+GGG | - | tig0023376:39551-39570 | Msa1408180:five_prime_UTR | 50.0% | |
| ! | GGAGCACTAGCAAAGACTCT+TGG | - | tig0023376:39572-39591 | Msa1408180:five_prime_UTR | 50.0% |
| ACTCTTGGGGACTCTGATCT+TGG | - | tig0023376:39587-39606 | Msa1408180:five_prime_UTR | 50.0% | |
| GATGGGGAAAAGCTACAGAG+TGG | - | tig0023376:39650-39669 | Msa1408180:intron | 50.0% | |
| ! | AGACTTTTCCTGCAATCCGG+GGG | + | tig0023376:39738-39757 | None:intergenic | 50.0% |
| ! | GAGACTTTTCCTGCAATCCG+GGG | + | tig0023376:39739-39758 | None:intergenic | 50.0% |
| GACTTAACTCAGCGGGGTAA+TGG | - | tig0023376:39836-39855 | Msa1408180:intron | 50.0% | |
| TGCCAATATTCGAGCTGCCA+AGG | + | tig0023376:39873-39892 | None:intergenic | 50.0% | |
| GTCCCATAGTTACCAGCATG+AGG | + | tig0023376:40123-40142 | None:intergenic | 50.0% | |
| TGCTGGTAACTATGGGACCA+AGG | - | tig0023376:40125-40144 | Msa1408180:intron | 50.0% | |
| GGACCATGAAGGAGTCTTCC+CGG | - | tig0023376:34324-34343 | Msa1408180:three_prime_UTR | 55.0% | |
| AGAGAGACCTGGAGGTGAAG+GGG | + | tig0023376:34474-34493 | None:intergenic | 55.0% | |
| GAGAGAGACCTGGAGGTGAA+GGG | + | tig0023376:34475-34494 | None:intergenic | 55.0% | |
| AGAGAGAGACCTGGAGGTGA+AGG | + | tig0023376:34476-34495 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGAGACCTGG+AGG | + | tig0023376:34482-34501 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGAGAGACC+TGG | + | tig0023376:34485-34504 | None:intergenic | 55.0% | |
| ! | AGCGAGATTAGCAGGGCACT+TGG | - | tig0023376:35549-35568 | Msa1408180:CDS | 55.0% |
| GCTACATCAGGCCTTTCTGC+CGG | - | tig0023376:35585-35604 | Msa1408180:CDS | 55.0% | |
| CCGGGCTGAAGCCATACAAA+TGG | - | tig0023376:35848-35867 | Msa1408180:intron | 55.0% | |
| CCGATGCAGCCTCATCAACT+AGG | - | tig0023376:35898-35917 | Msa1408180:intron | 55.0% | |
| CCCCATTACGGGCGATGTTA+TGG | - | tig0023376:35998-36017 | Msa1408180:intron | 55.0% | |
| CCAAACGACGCCCAAGAGAA+CGG | + | tig0023376:37037-37056 | None:intergenic | 55.0% | |
| ! | CGTTCTCTTGGGCGTCGTTT+GGG | - | tig0023376:37035-37054 | Msa1408180:intron | 55.0% |
| ! | GTTCTCTTGGGCGTCGTTTG+GGG | - | tig0023376:37036-37055 | Msa1408180:intron | 55.0% |
| ! | TTCTCTTGGGCGTCGTTTGG+GGG | - | tig0023376:37037-37056 | Msa1408180:intron | 55.0% |
| GTTGGCGGTGGCATTACTTC+TGG | - | tig0023376:37067-37086 | Msa1408180:intron | 55.0% | |
| TCTGCCTCCTCTTCTTCGCT+TGG | - | tig0023376:37836-37855 | Msa1408180:intron | 55.0% | |
| GAGACCAAGCGAAGAAGAGG+AGG | + | tig0023376:37843-37862 | None:intergenic | 55.0% | |
| AGCTGAGGGCGAGTGACATA+AGG | + | tig0023376:38186-38205 | None:intergenic | 55.0% | |
| TAAGCTAGCACCTGGCAGGT+TGG | - | tig0023376:38829-38848 | Msa1408180:CDS | 55.0% | |
| CAGTCCAATGCCAAAGCGCA+AGG | - | tig0023376:39448-39467 | Msa1408180:exon | 55.0% | |
| GCCGGATGCTTAGTTCATGG+TGG | - | tig0023376:39500-39519 | Msa1408180:five_prime_UTR | 55.0% | |
| ! | TCATGGTGGTGTATGCACCG+TGG | - | tig0023376:39514-39533 | Msa1408180:five_prime_UTR | 55.0% |
| CCACTGCATCAGCCTCCAAT+AGG | + | tig0023376:39553-39572 | None:intergenic | 55.0% | |
| CCTATTGGAGGCTGATGCAG+TGG | - | tig0023376:39550-39569 | Msa1408180:five_prime_UTR | 55.0% | |
| TTTCCTGCAATCCGGGGGAA+GGG | + | tig0023376:39733-39752 | None:intergenic | 55.0% | |
| ! | TTTTCCTGCAATCCGGGGGA+AGG | + | tig0023376:39734-39753 | None:intergenic | 55.0% |
| ! | CCGTTCTCTTGGGCGTCGTT+TGG | - | tig0023376:37034-37053 | Msa1408180:intron | 60.0% |
| ! | TTGGGCGTCGTTTGGGGGAA+AGG | - | tig0023376:37042-37061 | Msa1408180:intron | 60.0% |
| TTATTGCAGCGCCTCTCCGC+AGG | - | tig0023376:37275-37294 | Msa1408180:intron | 60.0% | |
| GTGGTAAGCTAGCACCTGGC+AGG | - | tig0023376:38825-38844 | Msa1408180:CDS | 60.0% | |
| TTTCTCGGTTCCCCTTCCCC+CGG | - | tig0023376:39719-39738 | Msa1408180:intron | 60.0% | |
| TTCCTGCAATCCGGGGGAAG+GGG | + | tig0023376:39732-39751 | None:intergenic | 60.0% | |
| GGGGGAAAGGAAGTTGGCGG+TGG | - | tig0023376:37055-37074 | Msa1408180:intron | 65.0% | |
| TTCCCCTTCCCCCGGATTGC+AGG | - | tig0023376:39727-39746 | Msa1408180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023376 | gene | 34253 | 40418 | 34253 | ID=Msa1408180;Name=Msa1408180 |
| tig0023376 | mRNA | 34253 | 40418 | 34253 | ID=Msa1408180-mRNA-1;Parent=Msa1408180;Name=Msa1408180-mRNA-1;_AED=0.00;_eAED=0.00;_QI=392|1|1|1|0.75|0.6|5|487|1000 |
| tig0023376 | exon | 34253 | 35735 | 34253 | ID=Msa1408180-mRNA-1:exon:25504;Parent=Msa1408180-mRNA-1 |
| tig0023376 | exon | 36439 | 36926 | 36439 | ID=Msa1408180-mRNA-1:exon:25503;Parent=Msa1408180-mRNA-1 |
| tig0023376 | exon | 37375 | 37678 | 37375 | ID=Msa1408180-mRNA-1:exon:25502;Parent=Msa1408180-mRNA-1 |
| tig0023376 | exon | 38241 | 39614 | 38241 | ID=Msa1408180-mRNA-1:exon:25501;Parent=Msa1408180-mRNA-1 |
| tig0023376 | exon | 40186 | 40418 | 40186 | ID=Msa1408180-mRNA-1:exon:25500;Parent=Msa1408180-mRNA-1 |
| tig0023376 | five_prime_UTR | 40186 | 40418 | 40186 | ID=Msa1408180-mRNA-1:five_prime_utr;Parent=Msa1408180-mRNA-1 |
| tig0023376 | five_prime_UTR | 39456 | 39614 | 39456 | ID=Msa1408180-mRNA-1:five_prime_utr;Parent=Msa1408180-mRNA-1 |
| tig0023376 | CDS | 38241 | 39455 | 38241 | ID=Msa1408180-mRNA-1:cds;Parent=Msa1408180-mRNA-1 |
| tig0023376 | CDS | 37375 | 37678 | 37375 | ID=Msa1408180-mRNA-1:cds;Parent=Msa1408180-mRNA-1 |
| tig0023376 | CDS | 36439 | 36926 | 36439 | ID=Msa1408180-mRNA-1:cds;Parent=Msa1408180-mRNA-1 |
| tig0023376 | CDS | 34740 | 35735 | 34740 | ID=Msa1408180-mRNA-1:cds;Parent=Msa1408180-mRNA-1 |
| tig0023376 | three_prime_UTR | 34253 | 34739 | 34253 | ID=Msa1408180-mRNA-1:three_prime_utr;Parent=Msa1408180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
