Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0580920 | XP_003626576.1 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0580920 | sp|Q10FT0|PUB24_ORYSJ | 28.801 | 809 | 508 | 27 | 256 | 1000 | 15 | 819 | 7.81e-58 | 218 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0580920 | G7L516 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001380 | Msa0580920 | 0.811837 | 5.733451e-51 | -8.615850e-47 |
Msa0013280 | Msa0580920 | 0.853913 | 1.744693e-61 | -8.615850e-47 |
Msa0028320 | Msa0580920 | 0.849263 | 3.617526e-60 | -8.615850e-47 |
Msa0092410 | Msa0580920 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
Msa0101620 | Msa0580920 | 0.816629 | 5.010627e-52 | -8.615850e-47 |
Msa0106530 | Msa0580920 | 0.838418 | 2.909503e-57 | -8.615850e-47 |
Msa0131420 | Msa0580920 | 0.818360 | 2.041688e-52 | -8.615850e-47 |
Msa0187830 | Msa0580920 | 0.822792 | 1.959852e-53 | -8.615850e-47 |
Msa0234590 | Msa0580920 | 0.812769 | 3.589453e-51 | -8.615850e-47 |
Msa0377840 | Msa0580920 | 0.814991 | 1.161999e-51 | -8.615850e-47 |
Msa0408340 | Msa0580920 | 0.824899 | 6.284203e-54 | -8.615850e-47 |
Msa0419670 | Msa0580920 | 0.824550 | 7.595838e-54 | -8.615850e-47 |
Msa0426560 | Msa0580920 | 0.832687 | 8.200043e-56 | -8.615850e-47 |
Msa0466010 | Msa0580920 | 0.865539 | 5.487531e-65 | -8.615850e-47 |
Msa0473140 | Msa0580920 | 0.800756 | 1.241214e-48 | -8.615850e-47 |
Msa0277410 | Msa0580920 | 0.821665 | 3.578896e-53 | -8.615850e-47 |
Msa0490380 | Msa0580920 | 0.828958 | 6.729605e-55 | -8.615850e-47 |
Msa0511620 | Msa0580920 | 0.807626 | 4.612033e-50 | -8.615850e-47 |
Msa0517610 | Msa0580920 | 0.825666 | 4.138311e-54 | -8.615850e-47 |
Msa0524440 | Msa0580920 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
Msa0534880 | Msa0580920 | 0.810427 | 1.159055e-50 | -8.615850e-47 |
Msa0545150 | Msa0580920 | 0.805563 | 1.256419e-49 | -8.615850e-47 |
Msa0558420 | Msa0580920 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
Msa0574570 | Msa0580920 | 0.846930 | 1.593351e-59 | -8.615850e-47 |
Msa0574580 | Msa0580920 | 0.801769 | 7.701072e-49 | -8.615850e-47 |
Msa0574600 | Msa0580920 | 0.802422 | 5.653004e-49 | -8.615850e-47 |
Msa0580920 | Msa0614350 | 0.828267 | 9.887256e-55 | -8.615850e-47 |
Msa0580920 | Msa0688150 | 0.810142 | 1.335219e-50 | -8.615850e-47 |
Msa0580920 | Msa0696140 | 0.841118 | 5.767167e-58 | -8.615850e-47 |
Msa0580920 | Msa0697570 | 0.833158 | 6.260713e-56 | -8.615850e-47 |
Msa0580920 | Msa0708290 | 0.817680 | 2.907844e-52 | -8.615850e-47 |
Msa0580920 | Msa0708300 | 0.812109 | 5.002875e-51 | -8.615850e-47 |
Msa0580920 | Msa0708310 | 0.809951 | 1.467648e-50 | -8.615850e-47 |
Msa0580920 | Msa0786980 | 0.814981 | 1.168094e-51 | -8.615850e-47 |
Msa0580920 | Msa0827630 | 0.804863 | 1.760895e-49 | -8.615850e-47 |
Msa0580920 | Msa0865970 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
Msa0580920 | Msa0870060 | 0.824115 | 9.612192e-54 | -8.615850e-47 |
Msa0580920 | Msa0870830 | 0.820997 | 5.101576e-53 | -8.615850e-47 |
Msa0580920 | Msa0936530 | 0.862762 | 4.027466e-64 | -8.615850e-47 |
Msa0580920 | Msa0936550 | 0.840860 | 6.743269e-58 | -8.615850e-47 |
Msa0580920 | Msa0952360 | 0.809578 | 1.766034e-50 | -8.615850e-47 |
Msa0580920 | Msa0961650 | 0.811834 | 5.741649e-51 | -8.615850e-47 |
Msa0580920 | Msa0972770 | 0.832681 | 8.228890e-56 | -8.615850e-47 |
Msa0580920 | Msa0973520 | 0.858368 | 8.643241e-63 | -8.615850e-47 |
Msa0580920 | Msa0982780 | 0.862663 | 4.322283e-64 | -8.615850e-47 |
Msa0580920 | Msa1033780 | 0.811541 | 6.648794e-51 | -8.615850e-47 |
Msa0580920 | Msa1034700 | 0.820313 | 7.325994e-53 | -8.615850e-47 |
Msa0580920 | Msa1043120 | 0.826281 | 2.957094e-54 | -8.615850e-47 |
Msa0580920 | Msa1073660 | 0.810030 | 1.411625e-50 | -8.615850e-47 |
Msa0580920 | Msa1074540 | 0.801813 | 7.542210e-49 | -8.615850e-47 |
Msa0580920 | Msa1162060 | 0.803264 | 3.787606e-49 | -8.615850e-47 |
Msa0580920 | Msa1177330 | 0.807691 | 4.467188e-50 | -8.615850e-47 |
Msa0580920 | Msa1200710 | 0.820519 | 6.573145e-53 | -8.615850e-47 |
Msa0580920 | Msa1236730 | 0.830761 | 2.448157e-55 | -8.615850e-47 |
Msa0580920 | Msa1255060 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
Msa0580920 | Msa1293940 | 0.825423 | 4.726243e-54 | -8.615850e-47 |
Msa0580920 | Msa1295510 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
Msa0580920 | Msa1344890 | 0.820229 | 7.659093e-53 | -8.615850e-47 |
Msa0580920 | Msa1353890 | 0.808336 | 3.255982e-50 | -8.615850e-47 |
Msa0580920 | Msa1360410 | 0.840475 | 8.504003e-58 | -8.615850e-47 |
Msa0580920 | Msa1379580 | 0.806473 | 8.086791e-50 | -8.615850e-47 |
Msa0580920 | Msa1400340 | 0.804445 | 2.152525e-49 | -8.615850e-47 |
Msa0580920 | Msa1408180 | 0.987419 | 3.429394e-170 | -8.615850e-47 |
Msa0580920 | Msa1416730 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
Msa0580920 | Msa1424630 | 0.848743 | 5.045549e-60 | -8.615850e-47 |
Msa0580920 | Msa1430550 | 0.830629 | 2.636372e-55 | -8.615850e-47 |
Msa0580920 | Msa1448980 | 0.986994 | 1.101613e-168 | -8.615850e-47 |
Msa0580920 | Msa1458510 | 0.814876 | 1.232150e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0580920 | MtrunA17_Chr7g0275961 | 97.602 | 1001 | 23 | 1 | 1 | 1000 | 1 | 1001 | 0.0 | 1984 |
Msa0580920 | MtrunA17_Chr8g0346441 | 71.542 | 1005 | 281 | 3 | 1 | 1000 | 2 | 1006 | 0.0 | 1457 |
Msa0580920 | MtrunA17_Chr1g0188041 | 28.940 | 1009 | 670 | 18 | 10 | 990 | 8 | 997 | 1.62e-117 | 385 |
Msa0580920 | MtrunA17_Chr3g0084371 | 32.913 | 635 | 409 | 7 | 369 | 1000 | 213 | 833 | 4.12e-90 | 306 |
Msa0580920 | MtrunA17_Chr3g0144071 | 28.752 | 793 | 511 | 26 | 253 | 1000 | 27 | 810 | 5.96e-71 | 252 |
Msa0580920 | MtrunA17_Chr7g0248251 | 25.166 | 453 | 299 | 11 | 81 | 504 | 98 | 539 | 1.75e-21 | 100 |
Msa0580920 | MtrunA17_Chr4g0031431 | 22.260 | 593 | 409 | 12 | 12 | 563 | 3 | 584 | 1.80e-19 | 94.0 |
Msa0580920 | MtrunA17_Chr8g0373031 | 24.615 | 325 | 199 | 6 | 41 | 325 | 27 | 345 | 4.86e-19 | 92.8 |
Msa0580920 | MtrunA17_Chr2g0284461 | 23.629 | 474 | 305 | 12 | 82 | 505 | 106 | 572 | 3.67e-18 | 90.1 |
Msa0580920 | MtrunA17_Chr7g0237931 | 25.815 | 399 | 240 | 10 | 252 | 624 | 235 | 603 | 1.74e-17 | 87.4 |
Msa0580920 | MtrunA17_Chr7g0234671 | 25.348 | 359 | 192 | 12 | 259 | 590 | 82 | 391 | 2.52e-16 | 83.2 |
Msa0580920 | MtrunA17_Chr3g0106931 | 24.615 | 325 | 201 | 9 | 18 | 325 | 6 | 303 | 3.19e-16 | 84.0 |
Msa0580920 | MtrunA17_Chr5g0434171 | 25.431 | 232 | 140 | 5 | 259 | 462 | 39 | 265 | 5.24e-15 | 78.6 |
Msa0580920 | MtrunA17_Chr1g0183781 | 22.785 | 316 | 218 | 8 | 14 | 321 | 10 | 307 | 1.35e-14 | 78.6 |
Msa0580920 | MtrunA17_Chr4g0059201 | 23.788 | 433 | 281 | 15 | 84 | 474 | 141 | 566 | 2.47e-14 | 77.4 |
Msa0580920 | MtrunA17_Chr3g0122721 | 24.242 | 363 | 203 | 10 | 19 | 325 | 4 | 350 | 3.28e-14 | 77.4 |
Msa0580920 | MtrunA17_Chr3g0129811 | 23.496 | 349 | 199 | 10 | 259 | 578 | 87 | 396 | 6.42e-14 | 75.5 |
Msa0580920 | MtrunA17_Chr1g0199321 | 30.556 | 216 | 123 | 5 | 252 | 443 | 245 | 457 | 6.51e-14 | 75.9 |
Msa0580920 | MtrunA17_Chr2g0280671 | 25.140 | 358 | 233 | 11 | 256 | 589 | 16 | 362 | 8.77e-14 | 74.3 |
Msa0580920 | MtrunA17_Chr4g0044631 | 36.458 | 96 | 54 | 1 | 253 | 341 | 5 | 100 | 1.85e-13 | 73.6 |
Msa0580920 | MtrunA17_Chr7g0214471 | 29.878 | 164 | 103 | 5 | 257 | 409 | 597 | 759 | 1.88e-13 | 75.1 |
Msa0580920 | MtrunA17_Chr1g0196911 | 45.205 | 73 | 39 | 1 | 254 | 325 | 505 | 577 | 3.14e-13 | 74.3 |
Msa0580920 | MtrunA17_Chr4g0013091 | 26.378 | 254 | 159 | 7 | 82 | 321 | 140 | 379 | 4.93e-13 | 73.6 |
Msa0580920 | MtrunA17_Chr5g0437411 | 25.740 | 338 | 203 | 9 | 259 | 553 | 297 | 629 | 6.17e-13 | 73.2 |
Msa0580920 | MtrunA17_Chr8g0390311 | 32.847 | 137 | 70 | 3 | 204 | 325 | 337 | 466 | 9.59e-13 | 72.8 |
Msa0580920 | MtrunA17_Chr6g0479261 | 46.032 | 63 | 34 | 0 | 259 | 321 | 29 | 91 | 1.06e-12 | 71.6 |
Msa0580920 | MtrunA17_Chr7g0275081 | 24.169 | 331 | 189 | 8 | 255 | 584 | 78 | 347 | 1.14e-12 | 71.6 |
Msa0580920 | MtrunA17_Chr3g0110121 | 42.029 | 69 | 40 | 0 | 258 | 326 | 39 | 107 | 2.49e-12 | 70.5 |
Msa0580920 | MtrunA17_Chr8g0384041 | 38.554 | 83 | 43 | 1 | 259 | 341 | 14 | 88 | 2.92e-12 | 70.1 |
Msa0580920 | MtrunA17_Chr5g0420471 | 44.444 | 63 | 35 | 0 | 259 | 321 | 29 | 91 | 4.58e-12 | 69.3 |
Msa0580920 | MtrunA17_Chr4g0048811 | 43.939 | 66 | 36 | 1 | 257 | 321 | 7 | 72 | 4.70e-12 | 68.6 |
Msa0580920 | MtrunA17_Chr8g0377151 | 41.096 | 73 | 43 | 0 | 255 | 327 | 282 | 354 | 6.01e-12 | 70.1 |
Msa0580920 | MtrunA17_Chr1g0177271 | 41.860 | 86 | 44 | 3 | 251 | 330 | 3 | 88 | 1.09e-11 | 68.2 |
Msa0580920 | MtrunA17_Chr3g0079051 | 47.887 | 71 | 36 | 1 | 254 | 324 | 738 | 807 | 1.79e-11 | 68.6 |
Msa0580920 | MtrunA17_Chr1g0177281 | 42.683 | 82 | 41 | 3 | 251 | 326 | 3 | 84 | 2.19e-11 | 67.4 |
Msa0580920 | MtrunA17_Chr5g0413681 | 26.087 | 207 | 135 | 5 | 134 | 327 | 151 | 352 | 3.16e-11 | 67.4 |
Msa0580920 | MtrunA17_Chr7g0261371 | 24.232 | 293 | 190 | 8 | 42 | 325 | 42 | 311 | 6.72e-11 | 66.6 |
Msa0580920 | MtrunA17_Chr1g0177261 | 42.683 | 82 | 41 | 3 | 251 | 326 | 3 | 84 | 7.10e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0580920 | AT1G76390.1 | 27.919 | 788 | 517 | 28 | 257 | 1000 | 27 | 807 | 5.13e-56 | 209 |
Msa0580920 | AT1G76390.2 | 27.919 | 788 | 517 | 28 | 257 | 1000 | 27 | 807 | 5.13e-56 | 209 |
Msa0580920 | AT1G68940.1 | 24.568 | 1099 | 700 | 39 | 9 | 1000 | 9 | 1085 | 5.76e-54 | 205 |
Msa0580920 | AT1G20780.1 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
Msa0580920 | AT1G20780.2 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
Msa0580920 | AT1G20780.3 | 26.343 | 782 | 529 | 21 | 257 | 1000 | 25 | 797 | 8.74e-52 | 196 |
Msa0580920 | AT1G68940.2 | 24.877 | 1017 | 652 | 36 | 9 | 929 | 9 | 1009 | 4.12e-51 | 196 |
Msa0580920 | AT1G68940.3 | 28.309 | 763 | 485 | 30 | 217 | 929 | 206 | 956 | 7.54e-51 | 195 |
Msa0580920 | AT5G42340.1 | 25.996 | 477 | 291 | 13 | 81 | 540 | 117 | 548 | 7.45e-22 | 102 |
Msa0580920 | AT5G01830.1 | 23.874 | 444 | 296 | 11 | 82 | 495 | 104 | 535 | 2.02e-20 | 97.4 |
Msa0580920 | AT3G46510.1 | 22.798 | 579 | 381 | 12 | 14 | 545 | 8 | 567 | 4.48e-20 | 96.3 |
Msa0580920 | AT1G29340.1 | 23.355 | 471 | 308 | 12 | 82 | 504 | 118 | 583 | 1.71e-18 | 91.7 |
Msa0580920 | AT1G67530.2 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
Msa0580920 | AT1G67530.1 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
Msa0580920 | AT1G67530.4 | 22.255 | 683 | 397 | 19 | 19 | 576 | 3 | 676 | 6.49e-18 | 89.7 |
Msa0580920 | AT1G67530.3 | 25.862 | 348 | 211 | 11 | 19 | 326 | 3 | 343 | 2.12e-17 | 87.4 |
Msa0580920 | AT1G24330.1 | 23.053 | 655 | 404 | 19 | 19 | 586 | 3 | 644 | 2.51e-17 | 87.8 |
Msa0580920 | AT1G24330.2 | 23.053 | 655 | 404 | 19 | 19 | 586 | 3 | 644 | 2.51e-17 | 87.8 |
Msa0580920 | AT1G60190.1 | 25.346 | 434 | 272 | 12 | 82 | 474 | 102 | 524 | 3.11e-17 | 87.4 |
Msa0580920 | AT3G54790.3 | 26.573 | 286 | 190 | 9 | 60 | 341 | 55 | 324 | 9.35e-17 | 85.9 |
Msa0580920 | AT3G54790.1 | 26.573 | 286 | 190 | 9 | 60 | 341 | 55 | 324 | 9.35e-17 | 85.9 |
Msa0580920 | AT3G54790.2 | 26.573 | 286 | 190 | 9 | 60 | 341 | 19 | 288 | 1.27e-16 | 85.5 |
Msa0580920 | AT4G36550.1 | 26.349 | 315 | 192 | 8 | 39 | 343 | 23 | 307 | 1.52e-16 | 85.1 |
Msa0580920 | AT1G27910.1 | 26.460 | 291 | 165 | 9 | 82 | 327 | 65 | 351 | 6.95e-16 | 83.2 |
Msa0580920 | AT5G67340.1 | 21.649 | 582 | 379 | 14 | 49 | 586 | 48 | 596 | 7.60e-16 | 82.8 |
Msa0580920 | AT5G67340.2 | 21.649 | 582 | 379 | 14 | 49 | 586 | 48 | 596 | 7.60e-16 | 82.8 |
Msa0580920 | AT1G49780.1 | 39.000 | 100 | 54 | 1 | 253 | 345 | 5 | 104 | 1.21e-15 | 80.9 |
Msa0580920 | AT1G23030.1 | 26.062 | 353 | 226 | 11 | 259 | 585 | 245 | 588 | 1.32e-15 | 82.0 |
Msa0580920 | AT3G07360.1 | 24.697 | 413 | 222 | 14 | 183 | 582 | 9 | 345 | 1.98e-15 | 80.5 |
Msa0580920 | AT2G28830.1 | 27.857 | 280 | 170 | 7 | 255 | 505 | 184 | 460 | 9.16e-15 | 79.0 |
Msa0580920 | AT1G71020.2 | 26.463 | 393 | 234 | 14 | 246 | 622 | 86 | 439 | 2.43e-14 | 77.4 |
Msa0580920 | AT1G71020.1 | 26.463 | 393 | 234 | 14 | 246 | 622 | 234 | 587 | 2.57e-14 | 77.8 |
Msa0580920 | AT3G54850.1 | 23.517 | 472 | 297 | 14 | 13 | 443 | 11 | 459 | 5.02e-14 | 77.0 |
Msa0580920 | AT2G23140.1 | 31.250 | 176 | 109 | 3 | 152 | 325 | 138 | 303 | 2.44e-13 | 75.1 |
Msa0580920 | AT2G23140.2 | 31.250 | 176 | 109 | 3 | 152 | 325 | 135 | 300 | 2.57e-13 | 74.7 |
Msa0580920 | AT2G23140.4 | 31.250 | 176 | 109 | 3 | 152 | 325 | 135 | 300 | 2.57e-13 | 74.7 |
Msa0580920 | AT1G10560.1 | 24.603 | 378 | 216 | 14 | 12 | 343 | 21 | 375 | 2.95e-13 | 74.3 |
Msa0580920 | AT5G51270.2 | 37.288 | 118 | 58 | 4 | 210 | 325 | 701 | 804 | 3.13e-13 | 74.7 |
Msa0580920 | AT5G51270.1 | 37.288 | 118 | 58 | 4 | 210 | 325 | 701 | 804 | 3.13e-13 | 74.7 |
Msa0580920 | AT3G18710.1 | 31.176 | 170 | 96 | 7 | 259 | 411 | 16 | 181 | 3.55e-13 | 73.2 |
Msa0580920 | AT3G19380.1 | 26.471 | 204 | 127 | 3 | 259 | 439 | 18 | 221 | 1.19e-12 | 71.6 |
Msa0580920 | AT1G56040.1 | 41.935 | 93 | 50 | 3 | 228 | 320 | 330 | 418 | 4.49e-12 | 69.7 |
Msa0580920 | AT2G23140.3 | 45.714 | 70 | 38 | 0 | 256 | 325 | 42 | 111 | 1.26e-11 | 69.3 |
Msa0580920 | AT2G23140.5 | 45.714 | 70 | 38 | 0 | 256 | 325 | 42 | 111 | 1.26e-11 | 69.3 |
Msa0580920 | AT5G37490.1 | 46.032 | 63 | 34 | 0 | 259 | 321 | 35 | 97 | 2.73e-11 | 67.4 |
Msa0580920 | AT3G61390.4 | 42.647 | 68 | 39 | 0 | 254 | 321 | 277 | 344 | 4.54e-11 | 66.2 |
Msa0580920 | AT1G56030.1 | 30.387 | 181 | 92 | 7 | 170 | 320 | 212 | 388 | 4.75e-11 | 66.6 |
Msa0580920 | AT5G09800.1 | 43.077 | 65 | 37 | 0 | 259 | 323 | 15 | 79 | 6.63e-11 | 66.2 |
Msa0580920 | AT3G61390.2 | 42.647 | 68 | 39 | 0 | 254 | 321 | 352 | 419 | 7.03e-11 | 66.2 |
Msa0580920 | AT3G52450.1 | 42.857 | 77 | 43 | 1 | 251 | 326 | 3 | 79 | 9.64e-11 | 65.9 |
Find 246 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCAAATGTACAAGATATT+TGG | 0.110314 | 4_1:-86231493 | None:intergenic |
ATAGATTCTGAAGAGCTTTA+AGG | 0.144806 | 4_1:-86229091 | None:intergenic |
TGTTTCTTCTTCCTTAATTC+TGG | 0.167218 | 4_1:+86225615 | Msa0580920:five_prime_UTR |
CAAAAGAGTGCAGCCGAAAT+TGG | 0.190596 | 4_1:+86230518 | Msa0580920:CDS |
CTGTTTGCAACTTCTGATTA+AGG | 0.200985 | 4_1:-86226292 | None:intergenic |
TGCAGCAAGTTGCATAATTA+TGG | 0.224435 | 4_1:-86229228 | None:intergenic |
TGGACATGTAGGGATTTATT+TGG | 0.231092 | 4_1:+86231453 | Msa0580920:three_prime_UTR |
TGCCAAAGCGCAAGGGATTT+TGG | 0.237542 | 4_1:+86230654 | Msa0580920:CDS |
TTGTACATTTGAGGATTTAT+AGG | 0.243808 | 4_1:+86231502 | Msa0580920:three_prime_UTR |
CTTCGCCAAACGAGATTCTT+TGG | 0.244268 | 4_1:+86227136 | Msa0580920:CDS |
CCGTTCTCTTGGGCGTCGTT+TGG | 0.249163 | 4_1:+86228232 | Msa0580920:CDS |
AAGTCTCTATACAATATTTC+CGG | 0.254458 | 4_1:-86225541 | None:intergenic |
TATGCAGGCAGCTGAATTTA+AGG | 0.260625 | 4_1:+86226839 | Msa0580920:CDS |
CTCAAATGTACAAGATATTT+GGG | 0.265304 | 4_1:-86231492 | None:intergenic |
GCCCGTAATGGGGCAATAAA+AGG | 0.265730 | 4_1:-86227186 | None:intergenic |
TACATTGAGCTATTTCTTCA+TGG | 0.282646 | 4_1:+86231355 | Msa0580920:three_prime_UTR |
CGTTCTCTTGGGCGTCGTTT+GGG | 0.288386 | 4_1:+86228233 | Msa0580920:CDS |
TTTAGGCTACTGTTGTATTA+AGG | 0.291315 | 4_1:+86231418 | Msa0580920:three_prime_UTR |
TTTCTACCAACTTACTCTTT+TGG | 0.294603 | 4_1:-86230445 | None:intergenic |
GTTCCTCATGCTGGTAACTA+TGG | 0.296688 | 4_1:+86231315 | Msa0580920:three_prime_UTR |
CAACTACGCTATTGAGGTTC+TGG | 0.297090 | 4_1:+86226614 | Msa0580920:CDS |
AACAGTTATGATCCCAATTT+CGG | 0.302499 | 4_1:-86230531 | None:intergenic |
GGATCAAATTATTGCTTTGT+TGG | 0.303566 | 4_1:+86227067 | Msa0580920:CDS |
TGGTGGTGTCCTTGTGAATA+AGG | 0.304782 | 4_1:+86226500 | Msa0580920:CDS |
ATCCTTGGCAGCTCGAATAT+TGG | 0.309644 | 4_1:+86231066 | Msa0580920:CDS |
GGCACTTGGTCTTCTTCCTT+TGG | 0.310541 | 4_1:+86226761 | Msa0580920:CDS |
ACCATAACATCGCCCGTAAT+GGG | 0.322592 | 4_1:-86227197 | None:intergenic |
TTTGATTTCTTCAATTATTC+CGG | 0.327097 | 4_1:-86226802 | None:intergenic |
TTCTCTTAACAAATCATATT+CGG | 0.327657 | 4_1:-86228294 | None:intergenic |
TTCATTTCCCCTTCACCTCC+AGG | 0.332139 | 4_1:+86225662 | Msa0580920:five_prime_UTR |
TTCTTCTATTGATTGTTTCA+AGG | 0.332181 | 4_1:-86227351 | None:intergenic |
CGCCCTCAGCTTCATATATC+AGG | 0.332763 | 4_1:+86229393 | Msa0580920:CDS |
TTAGAGTTCAAACAGAAATA+TGG | 0.332862 | 4_1:+86230986 | Msa0580920:CDS |
GAGTCTATTGTCCGTTCTCT+TGG | 0.337575 | 4_1:+86228221 | Msa0580920:CDS |
AATTAAAGATGGAAAGAAAT+TGG | 0.338387 | 4_1:+86226644 | Msa0580920:CDS |
GGTCAAAATGTTGGCAGAAA+TGG | 0.338784 | 4_1:+86228968 | Msa0580920:CDS |
CCAAATATCTTGTACATTTG+AGG | 0.343134 | 4_1:+86231493 | Msa0580920:three_prime_UTR |
TGAGTGATCTGTTGAACTTT+TGG | 0.343181 | 4_1:-86230353 | None:intergenic |
AGAAACATAAACCAGAATTA+AGG | 0.344981 | 4_1:-86225626 | None:intergenic |
CCCCATTACGGGCGATGTTA+TGG | 0.345236 | 4_1:+86227196 | Msa0580920:CDS |
GTTGGCGGTGGCATTACTTC+TGG | 0.351916 | 4_1:+86228265 | Msa0580920:CDS |
GCTCTTCTAACTTTAATTGA+TGG | 0.352227 | 4_1:+86230830 | Msa0580920:CDS |
TAGATTCTGAAGAGCTTTAA+GGG | 0.353045 | 4_1:-86229090 | None:intergenic |
ATTTGAAGTTGAACTGTAAC+TGG | 0.356328 | 4_1:+86226257 | Msa0580920:five_prime_UTR |
CTTCTTCCTTTGGCTACATC+AGG | 0.362361 | 4_1:+86226771 | Msa0580920:CDS |
TAATGATGTTGAGATGAAAT+TGG | 0.364558 | 4_1:+86229064 | Msa0580920:CDS |
TCAAGGTTGCATACTACTAT+TGG | 0.366183 | 4_1:+86228331 | Msa0580920:CDS |
GATCTTTATCCGTGCCTTCT+TGG | 0.368976 | 4_1:-86230421 | None:intergenic |
AATAATTTGATCCATTTGTA+TGG | 0.372930 | 4_1:-86227057 | None:intergenic |
TAATATCTCTTCCTCAGATA+TGG | 0.374661 | 4_1:-86226865 | None:intergenic |
GGAAAAGTCTCTTAATGCTT+TGG | 0.376746 | 4_1:+86230946 | Msa0580920:CDS |
TCAAGATTTGTGTGAACAAA+AGG | 0.380110 | 4_1:+86227469 | Msa0580920:CDS |
AAGAGATGCAACAGAGTTAC+TGG | 0.382745 | 4_1:+86228388 | Msa0580920:CDS |
CAAGAGAAGATTGAACCTTA+TGG | 0.385245 | 4_1:-86231179 | None:intergenic |
CACCAAAATCCCTTGCGCTT+TGG | 0.387064 | 4_1:-86230656 | None:intergenic |
GAAAATTGAGTCAGCGATAC+AGG | 0.388658 | 4_1:+86226890 | Msa0580920:CDS |
AGAAGAAATTGTTTCTGCTA+TGG | 0.390914 | 4_1:+86230313 | Msa0580920:CDS |
CCGAGAAATCTTATTATTAG+TGG | 0.391945 | 4_1:-86230902 | None:intergenic |
CTTCTCATTGCAGATGCTGT+TGG | 0.393808 | 4_1:+86226951 | Msa0580920:CDS |
CTCTTCTAACTTTAATTGAT+GGG | 0.399492 | 4_1:+86230831 | Msa0580920:CDS |
GGACCATGAAGGAGTCTTCC+CGG | 0.403098 | 4_1:+86225522 | Msa0580920:five_prime_UTR |
ACTCTTGGGGACTCTGATCT+TGG | 0.404813 | 4_1:+86230785 | Msa0580920:CDS |
AATCCCTTGCGCTTTGGCAT+TGG | 0.405028 | 4_1:-86230650 | None:intergenic |
TAAAAGAGTTGTATTGACTT+TGG | 0.411866 | 4_1:+86225501 | Msa0580920:five_prime_UTR |
TTGAGGAAGGAAGGCTATGC+TGG | 0.412864 | 4_1:-86229184 | None:intergenic |
CCACTAATAATAAGATTTCT+CGG | 0.413661 | 4_1:+86230902 | Msa0580920:CDS |
GAGCACTAGCAAAGACTCTT+GGG | 0.415263 | 4_1:+86230771 | Msa0580920:CDS |
GAAGAAATTGTTTCTGCTAT+GGG | 0.415771 | 4_1:+86230314 | Msa0580920:CDS |
ACTCCAACTTGGACAGGAAA+TGG | 0.418628 | 4_1:+86231237 | Msa0580920:three_prime_UTR |
GCAAGAATTTGGATAAGAAC+AGG | 0.422587 | 4_1:-86227530 | None:intergenic |
CAGATGAAGATTTCAGCATC+TGG | 0.423656 | 4_1:-86230286 | None:intergenic |
ACATAGAGAATGGGTGGTAC+TGG | 0.424708 | 4_1:+86227496 | Msa0580920:CDS |
CTCAGTGGCTTTATGATGCC+GGG | 0.426765 | 4_1:+86230372 | Msa0580920:CDS |
TTCGCCAAACGAGATTCTTT+GGG | 0.428118 | 4_1:+86227137 | Msa0580920:CDS |
TCTGCCTCCTCTTCTTCGCT+TGG | 0.432088 | 4_1:+86229034 | Msa0580920:CDS |
GACATAAGGAATAAAATGTC+TGG | 0.432764 | 4_1:-86229367 | None:intergenic |
GACCCTGTGGAAACTTCATC+AGG | 0.432982 | 4_1:+86227221 | Msa0580920:CDS |
TCCGAGATTGTATATTCTGC+TGG | 0.433338 | 4_1:+86226480 | Msa0580920:CDS |
AACCATAACATCGCCCGTAA+TGG | 0.435781 | 4_1:-86227198 | None:intergenic |
GTTCTCTTGGGCGTCGTTTG+GGG | 0.436743 | 4_1:+86228234 | Msa0580920:CDS |
TCGGACTCTAACAATGAAAC+TGG | 0.436901 | 4_1:-86229278 | None:intergenic |
TTTCCGGGAAGACTCCTTCA+TGG | 0.438144 | 4_1:-86225525 | None:intergenic |
ATTGACGTCTGGTCCTGCTT+CGG | 0.440408 | 4_1:+86226428 | Msa0580920:CDS |
TGCCCTGATGAAGTTTCCAC+AGG | 0.443199 | 4_1:-86227224 | None:intergenic |
AAAAGAGTGCAGCCGAAATT+GGG | 0.444063 | 4_1:+86230519 | Msa0580920:CDS |
AGTCTATTGTCCGTTCTCTT+GGG | 0.444455 | 4_1:+86228222 | Msa0580920:CDS |
AGAGAGAGACCTGGAGGTGA+AGG | 0.445746 | 4_1:-86225671 | None:intergenic |
AAAAGGATCAACATAGAGAA+TGG | 0.445892 | 4_1:+86227486 | Msa0580920:CDS |
CCTTGTCATCCTTTGCATGC+TGG | 0.448757 | 4_1:+86227583 | Msa0580920:CDS |
AGTCTCTATACAATATTTCC+GGG | 0.453734 | 4_1:-86225540 | None:intergenic |
CAGCACTTGCTCGAAGACTT+AGG | 0.455970 | 4_1:-86230178 | None:intergenic |
GGAGCACTAGCAAAGACTCT+TGG | 0.456202 | 4_1:+86230770 | Msa0580920:CDS |
ATAATATATTGTCGCACATC+AGG | 0.457156 | 4_1:-86229344 | None:intergenic |
GACTTAACTCAGCGGGGTAA+TGG | 0.459297 | 4_1:+86231034 | Msa0580920:CDS |
TGAGAAATAGCTTCCGAAGC+AGG | 0.459853 | 4_1:-86226441 | None:intergenic |
AAATTATTGCTTTGTTGGAA+AGG | 0.461802 | 4_1:+86227072 | Msa0580920:CDS |
CCACTGCATCAGCCTCCAAT+AGG | 0.465482 | 4_1:-86230748 | None:intergenic |
GCAGCAAGTTGCATAATTAT+GGG | 0.468365 | 4_1:-86229227 | None:intergenic |
ACAACACAAGCGAGATTAGC+AGG | 0.469123 | 4_1:+86226739 | Msa0580920:CDS |
AGAGAAGTGCAATTGAAAAG+TGG | 0.470162 | 4_1:+86227255 | Msa0580920:CDS |
GGAGTCAACAGACCACAATA+AGG | 0.470502 | 4_1:+86228989 | Msa0580920:CDS |
AGAACACAATCATTCTAGAA+AGG | 0.471476 | 4_1:-86231557 | None:intergenic |
GAATACATTGGAAAAGTTCA+AGG | 0.472905 | 4_1:+86228314 | Msa0580920:CDS |
TTAGTACAGTTGCTTGAAAG+TGG | 0.473074 | 4_1:+86230554 | Msa0580920:CDS |
TCTGTTTGAACTCTAATAGC+CGG | 0.477505 | 4_1:-86230979 | None:intergenic |
TTATTGCAGCGCCTCTCCGC+AGG | 0.479058 | 4_1:+86228473 | Msa0580920:CDS |
TTCTTTGGGCACTCAACCGT+TGG | 0.479972 | 4_1:+86227151 | Msa0580920:CDS |
AGCTGAGGGCGAGTGACATA+AGG | 0.486360 | 4_1:-86229381 | None:intergenic |
ATGAGAGAGAAAATCCAGTC+TGG | 0.486384 | 4_1:+86227410 | Msa0580920:CDS |
AACCGTTGCAAACTCCAACT+TGG | 0.491187 | 4_1:+86231226 | Msa0580920:three_prime_UTR |
GACATTCAACTACGCTATTG+AGG | 0.492101 | 4_1:+86226608 | Msa0580920:CDS |
TAATGGTAGCATTAAATCCT+TGG | 0.492614 | 4_1:+86231051 | Msa0580920:CDS |
AGATGATGTGAAGATGATTA+TGG | 0.492830 | 4_1:+86228947 | Msa0580920:CDS |
AAAACAGTTGAGCAAAGAAA+AGG | 0.493725 | 4_1:+86226572 | Msa0580920:CDS |
CGCTGAGTTAAGTCAACTAA+AGG | 0.494837 | 4_1:-86231025 | None:intergenic |
CCGATGCAGCCTCATCAACT+AGG | 0.494891 | 4_1:+86227096 | Msa0580920:CDS |
TTCTCTTGATCCTTTGAGTG+TGG | 0.495152 | 4_1:+86231194 | Msa0580920:three_prime_UTR |
AGTGCCCAAAGAATCTCGTT+TGG | 0.495380 | 4_1:-86227141 | None:intergenic |
GCTACATCAGGCCTTTCTGC+CGG | 0.495835 | 4_1:+86226783 | Msa0580920:CDS |
GTGCCCATCAGTTCTAGTAT+TGG | 0.496921 | 4_1:+86230133 | Msa0580920:intron |
TTCCTCATGCTGGTAACTAT+GGG | 0.497280 | 4_1:+86231316 | Msa0580920:three_prime_UTR |
ACTCAGTGGCTTTATGATGC+CGG | 0.497763 | 4_1:+86230371 | Msa0580920:CDS |
CTGATTCACATGCTTTAGTA+CGG | 0.497925 | 4_1:-86230243 | None:intergenic |
CAGTTCCAACAAACTTGGAA+TGG | 0.500790 | 4_1:+86230495 | Msa0580920:CDS |
AGCCTCATCAACTAGGGAAA+AGG | 0.501840 | 4_1:+86227103 | Msa0580920:CDS |
TTCTCAGCTCAAACAGAAGC+CGG | 0.503222 | 4_1:+86230680 | Msa0580920:CDS |
GAACACAATCATTCTAGAAA+GGG | 0.503272 | 4_1:-86231556 | None:intergenic |
CCGGGCTGAAGCCATACAAA+TGG | 0.503510 | 4_1:+86227046 | Msa0580920:CDS |
GAAGCCGGATGCTTAGTTCA+TGG | 0.503760 | 4_1:+86230695 | Msa0580920:CDS |
TTCTCTTGGGCGTCGTTTGG+GGG | 0.506612 | 4_1:+86228235 | Msa0580920:CDS |
TTTAGTTGACTTAACTCAGC+GGG | 0.507459 | 4_1:+86231027 | Msa0580920:CDS |
ATTAAGGAAGAAGAAACAAG+TGG | 0.508143 | 4_1:-86225610 | None:intergenic |
AGTCAAGCTAACTAACCATA+AGG | 0.508261 | 4_1:+86231164 | Msa0580920:three_prime_UTR |
TGAAACAATCAATAGAAGAA+TGG | 0.509887 | 4_1:+86227354 | Msa0580920:CDS |
CTGGATCGTGAAATTAAAGA+TGG | 0.511439 | 4_1:+86226633 | Msa0580920:CDS |
AAATTGAAAATGAGAAAGAC+CGG | 0.513019 | 4_1:+86227027 | Msa0580920:CDS |
GCTCTCGATTCATTGACGTC+TGG | 0.513409 | 4_1:+86226417 | Msa0580920:CDS |
CCTAGTTGATGAGGCTGCAT+CGG | 0.516667 | 4_1:-86227096 | None:intergenic |
AGAATATACAATCTCGGAAA+CGG | 0.522713 | 4_1:-86226475 | None:intergenic |
AGGATCACCATTGGACATGT+AGG | 0.524032 | 4_1:+86231442 | Msa0580920:three_prime_UTR |
AAAGGATCAACATAGAGAAT+GGG | 0.525376 | 4_1:+86227487 | Msa0580920:CDS |
AAGAAGCAAATTATTTGCAT+AGG | 0.529424 | 4_1:-86226931 | None:intergenic |
AGCGAGATTAGCAGGGCACT+TGG | 0.531022 | 4_1:+86226747 | Msa0580920:CDS |
GAAATGGTACTCTTTGACAA+AGG | 0.532276 | 4_1:+86231253 | Msa0580920:three_prime_UTR |
CTTCAATTATTCCGGCAGAA+AGG | 0.532534 | 4_1:-86226794 | None:intergenic |
GAATAATTGAAGAAATCAAA+AGG | 0.533410 | 4_1:+86226805 | Msa0580920:CDS |
CTTCATCACAACTTTCTACC+AGG | 0.533965 | 4_1:-86230217 | None:intergenic |
ACCACCATGAACTAAGCATC+CGG | 0.534367 | 4_1:-86230699 | None:intergenic |
TTAACCAATACTAGAACTGA+TGG | 0.534861 | 4_1:-86230137 | None:intergenic |
CCAAACGACGCCCAAGAGAA+CGG | 0.534864 | 4_1:-86228232 | None:intergenic |
ATCCAGTCTGGAGATGAAGT+TGG | 0.536931 | 4_1:+86227422 | Msa0580920:CDS |
CCTATTGGAGGCTGATGCAG+TGG | 0.539684 | 4_1:+86230748 | Msa0580920:CDS |
TTGCAAACTCCAACTTGGAC+AGG | 0.540541 | 4_1:+86231231 | Msa0580920:three_prime_UTR |
CAGTCCAATGCCAAAGCGCA+AGG | 0.546854 | 4_1:+86230646 | Msa0580920:CDS |
TCTTCTAACTTTAATTGATG+GGG | 0.547043 | 4_1:+86230832 | Msa0580920:CDS |
AAGTTGAACTGTAACTGGTA+TGG | 0.547293 | 4_1:+86226262 | Msa0580920:five_prime_UTR |
ATTGATGTGGTTCCTCATGC+TGG | 0.548569 | 4_1:+86231306 | Msa0580920:three_prime_UTR |
AAGGTTATGTGACAATATGC+AGG | 0.548812 | 4_1:+86226824 | Msa0580920:CDS |
ATTGAAAAGTGGTTTGCAGA+AGG | 0.549173 | 4_1:+86227266 | Msa0580920:CDS |
CTCCAACTTCATCTCCAGAC+TGG | 0.550709 | 4_1:-86227424 | None:intergenic |
GAGAGAGACCTGGAGGTGAA+GGG | 0.551453 | 4_1:-86225670 | None:intergenic |
TATTAAGGTAGGATCACCAT+TGG | 0.553192 | 4_1:+86231433 | Msa0580920:three_prime_UTR |
GTCCAAGTTGGAGTTTGCAA+CGG | 0.553493 | 4_1:-86231228 | None:intergenic |
TGCCAATATTCGAGCTGCCA+AGG | 0.556667 | 4_1:-86231068 | None:intergenic |
TGTGAGACCAAGCGAAGAAG+AGG | 0.557284 | 4_1:-86229041 | None:intergenic |
AGAGAGACCTGGAGGTGAAG+GGG | 0.557734 | 4_1:-86225669 | None:intergenic |
GATGATTATGGTCAAAATGT+TGG | 0.559722 | 4_1:+86228959 | Msa0580920:CDS |
AGATCTCCAAAAGAGTAAGT+TGG | 0.561048 | 4_1:+86230439 | Msa0580920:CDS |
GGCTACTGTTGTATTAAGGT+AGG | 0.564180 | 4_1:+86231422 | Msa0580920:three_prime_UTR |
GGGCAATAAAAGGACTGTAA+AGG | 0.567503 | 4_1:-86227176 | None:intergenic |
CATCCTTTGCATGCTGGTGA+AGG | 0.567676 | 4_1:+86227589 | Msa0580920:CDS |
GTACCATTTCCTGTCCAAGT+TGG | 0.569180 | 4_1:-86231240 | None:intergenic |
CAGACAAACTTGAGGAAGGA+AGG | 0.571151 | 4_1:-86229193 | None:intergenic |
GGATCACCATTGGACATGTA+GGG | 0.572870 | 4_1:+86231443 | Msa0580920:three_prime_UTR |
TTAAGGAAGAAGAAACAAGT+GGG | 0.574089 | 4_1:-86225609 | None:intergenic |
CCATTTGTATGGCTTCAGCC+CGG | 0.574553 | 4_1:-86227046 | None:intergenic |
ATTTGTAAATATGTCCAAGA+AGG | 0.574783 | 4_1:+86230407 | Msa0580920:CDS |
CAAATAAGATCTCCTTATTG+TGG | 0.574828 | 4_1:-86229001 | None:intergenic |
ACCAGCAGAATATACAATCT+CGG | 0.575255 | 4_1:-86226481 | None:intergenic |
TGATCAGAATGTTATACAGA+TGG | 0.580464 | 4_1:+86228427 | Msa0580920:CDS |
ACAAATGATTGACAGTGCCC+CGG | 0.582021 | 4_1:-86230390 | None:intergenic |
GTGAAGGGGAAATGAAAGCA+TGG | 0.582662 | 4_1:-86225655 | None:intergenic |
GGACGTGATTTCTTATATCA+CGG | 0.585501 | 4_1:-86227562 | None:intergenic |
TTTCTCGGTTCCCCTTCCCC+CGG | 0.586356 | 4_1:+86230917 | Msa0580920:CDS |
CGATGCAGCCTCATCAACTA+GGG | 0.594063 | 4_1:+86227097 | Msa0580920:CDS |
GAAGGATAATGAAGATGCCA+AGG | 0.594611 | 4_1:+86227607 | Msa0580920:CDS |
AGTCTCTTAATGCTTTGGAG+AGG | 0.598854 | 4_1:+86230951 | Msa0580920:CDS |
GCAAATTATTTGCATAGGAG+CGG | 0.598960 | 4_1:-86226926 | None:intergenic |
TCAATGTAGAGCTACAACCT+TGG | 0.601421 | 4_1:-86231340 | None:intergenic |
TAAATATGTCCAAGAAGGCA+CGG | 0.604022 | 4_1:+86230412 | Msa0580920:CDS |
GAGACCAAGCGAAGAAGAGG+AGG | 0.605749 | 4_1:-86229038 | None:intergenic |
TGTCTGTGTATCGTGGGAGA+TGG | 0.608558 | 4_1:-86229255 | None:intergenic |
GTATTGACTTTGGACCATGA+AGG | 0.608695 | 4_1:+86225511 | Msa0580920:five_prime_UTR |
ATAAATCCCTACATGTCCAA+TGG | 0.609617 | 4_1:-86231449 | None:intergenic |
AAGGACTGTAAAGGCTCCAA+CGG | 0.613375 | 4_1:-86227167 | None:intergenic |
CTGTATAACATTCTGATCAG+AGG | 0.615382 | 4_1:-86228423 | None:intergenic |
TGCAAGAAGAGAGTGGTCAA+AGG | 0.617280 | 4_1:+86225478 | Msa0580920:five_prime_UTR |
GGATCAACATAGAGAATGGG+TGG | 0.618589 | 4_1:+86227490 | Msa0580920:CDS |
CTATTGGAGGCTGATGCAGT+GGG | 0.619490 | 4_1:+86230749 | Msa0580920:CDS |
CCATAACATCGCCCGTAATG+GGG | 0.620094 | 4_1:-86227196 | None:intergenic |
AACTGGTGTCTGTGTATCGT+GGG | 0.624756 | 4_1:-86229261 | None:intergenic |
CCAGCATGCAAAGGATGACA+AGG | 0.625405 | 4_1:-86227583 | None:intergenic |
AATAGCGTAGTTGAATGTCT+CGG | 0.625479 | 4_1:-86226604 | None:intergenic |
GTTCCTGATATATGAAGCTG+AGG | 0.627010 | 4_1:-86229396 | None:intergenic |
TAGGCAAAATGATGATTCCA+CGG | 0.628178 | 4_1:-86230729 | None:intergenic |
TATCCTTCACCAGCATGCAA+AGG | 0.628279 | 4_1:-86227592 | None:intergenic |
TGCTGGTAACTATGGGACCA+AGG | 0.628279 | 4_1:+86231323 | Msa0580920:three_prime_UTR |
TCTAAAGTAATGAAAGTCAG+AGG | 0.629710 | 4_1:-86227302 | None:intergenic |
TGTTCAGACAAACTTGAGGA+AGG | 0.629932 | 4_1:-86229197 | None:intergenic |
CGATGTTATGGTTGACCCTG+TGG | 0.631793 | 4_1:+86227208 | Msa0580920:CDS |
TTGATTCGATTAATGTACTG+AGG | 0.635484 | 4_1:+86231136 | Msa0580920:three_prime_UTR |
GCCCTGATGAAGTTTCCACA+GGG | 0.642472 | 4_1:-86227223 | None:intergenic |
AGTCCAATGCCAAAGCGCAA+GGG | 0.643668 | 4_1:+86230647 | Msa0580920:CDS |
GATTTGTTAAGAGAATACAT+TGG | 0.644649 | 4_1:+86228302 | Msa0580920:CDS |
GTCCCATAGTTACCAGCATG+AGG | 0.645429 | 4_1:-86231318 | None:intergenic |
TAAAACTATCCTTATTCACA+AGG | 0.647242 | 4_1:-86226509 | None:intergenic |
AAGTTGGTAGAAAATTCTGT+TGG | 0.648592 | 4_1:+86230455 | Msa0580920:CDS |
TAACCAATACTAGAACTGAT+GGG | 0.650199 | 4_1:-86230136 | None:intergenic |
AAGGAGATCTTATTTGACAG+TGG | 0.654554 | 4_1:+86229008 | Msa0580920:CDS |
CAACACAAGCGAGATTAGCA+GGG | 0.657662 | 4_1:+86226740 | Msa0580920:CDS |
TAGACATTGCAAGAAGAGAG+TGG | 0.658480 | 4_1:+86225471 | Msa0580920:five_prime_UTR |
AAACTGGTGTCTGTGTATCG+TGG | 0.659248 | 4_1:-86229262 | None:intergenic |
GAAAGGCCTGATGTAGCCAA+AGG | 0.663513 | 4_1:-86226777 | None:intergenic |
GAGATTGTATATTCTGCTGG+TGG | 0.665523 | 4_1:+86226483 | Msa0580920:CDS |
TATCAGGAACAAGCTAAGAG+AGG | 0.670493 | 4_1:+86229409 | Msa0580920:CDS |
AGAATGTAGCAAGAAGAGCA+AGG | 0.671592 | 4_1:+86226671 | Msa0580920:CDS |
TACATGTTCAGACAAACTTG+AGG | 0.676181 | 4_1:-86229201 | None:intergenic |
ATTTAAGGCAGCCATATCTG+AGG | 0.678912 | 4_1:+86226854 | Msa0580920:CDS |
TCAGTGGCTTTATGATGCCG+GGG | 0.680655 | 4_1:+86230373 | Msa0580920:CDS |
ACCCTGTGGAAACTTCATCA+GGG | 0.681271 | 4_1:+86227222 | Msa0580920:CDS |
AATTGAAAATGAGAAAGACC+GGG | 0.681485 | 4_1:+86227028 | Msa0580920:CDS |
AGCACTAGCAAAGACTCTTG+GGG | 0.684963 | 4_1:+86230772 | Msa0580920:CDS |
TTCCTGATATATGAAGCTGA+GGG | 0.686175 | 4_1:-86229395 | None:intergenic |
TTCAAGATAAACCTGCGGAG+AGG | 0.687813 | 4_1:-86228484 | None:intergenic |
TCAAATGTACAAGATATTTG+GGG | 0.690097 | 4_1:-86231491 | None:intergenic |
GGACTTGAAATGATTCGACA+AGG | 0.693095 | 4_1:+86229131 | Msa0580920:CDS |
CTGTTGGAATTACAAAAGAG+CGG | 0.703567 | 4_1:+86226967 | Msa0580920:CDS |
GATGGGGAAAAGCTACAGAG+TGG | 0.711474 | 4_1:+86230848 | Msa0580920:CDS |
GGTGACTATGTCTAGCAGTG+AGG | 0.713604 | 4_1:+86228352 | Msa0580920:CDS |
GCCGGATGCTTAGTTCATGG+TGG | 0.716891 | 4_1:+86230698 | Msa0580920:CDS |
TTAGTTGACTTAACTCAGCG+GGG | 0.718603 | 4_1:+86231028 | Msa0580920:CDS |
GCAGCAGCATGATATTGATG+TGG | 0.721463 | 4_1:+86231293 | Msa0580920:three_prime_UTR |
CTTTAGTTGACTTAACTCAG+CGG | 0.730540 | 4_1:+86231026 | Msa0580920:CDS |
GAGAGATAAACATAAGAACA+CGG | 0.737988 | 4_1:-86225587 | None:intergenic |
AAGTTCAACAGATCACTCAG+TGG | 0.761886 | 4_1:+86230357 | Msa0580920:CDS |
TCATGGTGGTGTATGCACCG+TGG | 0.772961 | 4_1:+86230712 | Msa0580920:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATAATAAAGAATAAG+GGG | - | chr4_1:86228084-86228103 | None:intergenic | 10.0% |
!! | TTAAATTTAAGAAACATATC+CGG | - | chr4_1:86226014-86226033 | None:intergenic | 15.0% |
!! | CTAAATAATATCTATCAATA+GGG | + | chr4_1:86226192-86226211 | Msa0580920:intron | 15.0% |
!! | AATATGTAAGATAAAACTAA+AGG | - | chr4_1:86227683-86227702 | None:intergenic | 15.0% |
!!! | GTATTGATTGAATTTAAAAA+GGG | + | chr4_1:86228574-86228593 | Msa0580920:intron | 15.0% |
!!! | ACATTAAAATCTATTTTGTA+AGG | - | chr4_1:86228727-86228746 | None:intergenic | 15.0% |
!!! | TAATGTTAAATTTTTCAACT+AGG | + | chr4_1:86228741-86228760 | Msa0580920:intron | 15.0% |
!!! | GTTTAAATTTTGTTTATCTT+TGG | - | chr4_1:86229600-86229619 | None:intergenic | 15.0% |
!! | AAAAATTACATTTCTAATGA+AGG | + | chr4_1:86229823-86229842 | Msa0580920:intron | 15.0% |
!! | AAAAAACTCAAATGTAACTA+TGG | - | chr4_1:86225753-86225772 | None:intergenic | 20.0% |
!! | TAAATTTAACGCCTAAAAAA+CGG | - | chr4_1:86225787-86225806 | None:intergenic | 20.0% |
!! | AGAAATGAAAACATTTGATT+TGG | - | chr4_1:86225826-86225845 | None:intergenic | 20.0% |
!! | TTAAACTAAACATCAATTGT+TGG | + | chr4_1:86226030-86226049 | Msa0580920:intron | 20.0% |
!!! | TTATTTAGGATACTAAACTA+AGG | - | chr4_1:86226180-86226199 | None:intergenic | 20.0% |
!! | CCTATTGATAGATATTATTT+AGG | - | chr4_1:86226194-86226213 | None:intergenic | 20.0% |
!! | CCTAAATAATATCTATCAAT+AGG | + | chr4_1:86226191-86226210 | Msa0580920:intron | 20.0% |
!!! | TGATTTTCTTTTATTCTTAC+TGG | + | chr4_1:86226226-86226245 | Msa0580920:intron | 20.0% |
!! | AATTAAAGATGGAAAGAAAT+TGG | + | chr4_1:86226644-86226663 | Msa0580920:CDS | 20.0% |
!!! | TTTGATTTCTTCAATTATTC+CGG | - | chr4_1:86226805-86226824 | None:intergenic | 20.0% |
!! | GAATAATTGAAGAAATCAAA+AGG | + | chr4_1:86226805-86226824 | Msa0580920:CDS | 20.0% |
!! | AATAATTTGATCCATTTGTA+TGG | - | chr4_1:86227060-86227079 | None:intergenic | 20.0% |
!! | TGCAAAATATCATTATGTAA+TGG | + | chr4_1:86227790-86227809 | Msa0580920:intron | 20.0% |
!! | TTTCACATATTTCATATAGA+AGG | + | chr4_1:86227877-86227896 | Msa0580920:intron | 20.0% |
!!! | AATTCTATTTCTTTAAGCAT+TGG | - | chr4_1:86227911-86227930 | None:intergenic | 20.0% |
!! | AATGCTTAAAGAAATAGAAT+TGG | + | chr4_1:86227910-86227929 | Msa0580920:intron | 20.0% |
!!! | TATTATTTTTTTAGGTCAAG+AGG | - | chr4_1:86227953-86227972 | None:intergenic | 20.0% |
!!! | TGTTGTGCTATTATTTTTTT+AGG | - | chr4_1:86227961-86227980 | None:intergenic | 20.0% |
!! | TTCTCTTAACAAATCATATT+CGG | - | chr4_1:86228297-86228316 | None:intergenic | 20.0% |
!!! | GGTATTGATTGAATTTAAAA+AGG | + | chr4_1:86228573-86228592 | Msa0580920:intron | 20.0% |
!!! | CTATCTACTTTAAAGAAAAA+TGG | + | chr4_1:86229110-86229129 | Msa0580920:CDS | 20.0% |
!!! | ATTAGAAATGTAATTTTTGC+AGG | - | chr4_1:86229821-86229840 | None:intergenic | 20.0% |
!! | TATTATCAAGGTTTATAGTA+AGG | - | chr4_1:86230064-86230083 | None:intergenic | 20.0% |
!!! | TAAGTGTTTTCATTCAATTT+AGG | + | chr4_1:86231401-86231420 | Msa0580920:three_prime_UTR | 20.0% |
!!! | TAAAAGAGTTGTATTGACTT+TGG | + | chr4_1:86225501-86225520 | Msa0580920:five_prime_UTR | 25.0% |
! | AAGTCTCTATACAATATTTC+CGG | - | chr4_1:86225544-86225563 | None:intergenic | 25.0% |
! | AGAAACATAAACCAGAATTA+AGG | - | chr4_1:86225629-86225648 | None:intergenic | 25.0% |
!! | ATTTTCATTGTTGGAAAAGA+AGG | - | chr4_1:86225919-86225938 | None:intergenic | 25.0% |
! | GTTATTATACTTATACATGC+CGG | + | chr4_1:86225992-86226011 | Msa0580920:intron | 25.0% |
! | TAATATCTATCAATAGGGAA+TGG | + | chr4_1:86226197-86226216 | Msa0580920:intron | 25.0% |
!! | CTTTTATTCTTACTGGATTT+AGG | + | chr4_1:86226233-86226252 | Msa0580920:intron | 25.0% |
! | ACAAAAACAGTAGAAAATGT+TGG | - | chr4_1:86226338-86226357 | None:intergenic | 25.0% |
!!! | TTTCTACTGTTTTTGTTTCA+TGG | + | chr4_1:86226342-86226361 | Msa0580920:five_prime_UTR | 25.0% |
!!! | TTCTACTGTTTTTGTTTCAT+GGG | + | chr4_1:86226343-86226362 | Msa0580920:five_prime_UTR | 25.0% |
!!! | GAAAAAGGGATTTTATTTTC+TGG | + | chr4_1:86226367-86226386 | Msa0580920:five_prime_UTR | 25.0% |
! | TAAAACTATCCTTATTCACA+AGG | - | chr4_1:86226512-86226531 | None:intergenic | 25.0% |
!!! | TGTGAATAAGGATAGTTTTA+AGG | + | chr4_1:86226512-86226531 | Msa0580920:CDS | 25.0% |
! | AAGAAGCAAATTATTTGCAT+AGG | - | chr4_1:86226934-86226953 | None:intergenic | 25.0% |
! | AAATTGAAAATGAGAAAGAC+CGG | + | chr4_1:86227027-86227046 | Msa0580920:CDS | 25.0% |
!! | AAATTATTGCTTTGTTGGAA+AGG | + | chr4_1:86227072-86227091 | Msa0580920:CDS | 25.0% |
!! | TTCTTCTATTGATTGTTTCA+AGG | - | chr4_1:86227354-86227373 | None:intergenic | 25.0% |
! | TGAAACAATCAATAGAAGAA+TGG | + | chr4_1:86227354-86227373 | Msa0580920:CDS | 25.0% |
! | ATGTTACAAATTAAGTACCT+TGG | - | chr4_1:86227627-86227646 | None:intergenic | 25.0% |
! | ATGTTTATTGTGTAAAACAG+AGG | + | chr4_1:86227704-86227723 | Msa0580920:intron | 25.0% |
! | AAAATAATAGCACAACAGAT+TGG | + | chr4_1:86227964-86227983 | Msa0580920:intron | 25.0% |
! | TATGAAATTGTGCATAGTTA+TGG | - | chr4_1:86228139-86228158 | None:intergenic | 25.0% |
!!! | GATTTGTTAAGAGAATACAT+TGG | + | chr4_1:86228302-86228321 | Msa0580920:CDS | 25.0% |
! | ATAAAGAGACTCAAAATTGA+AGG | - | chr4_1:86228510-86228529 | None:intergenic | 25.0% |
! | AATGATCGATACACTATAAT+TGG | + | chr4_1:86228552-86228571 | Msa0580920:intron | 25.0% |
! | ATTATAAACACTACCTATGT+AGG | - | chr4_1:86228630-86228649 | None:intergenic | 25.0% |
! | CAGTTTAAGTAAATTAATCG+AGG | + | chr4_1:86228804-86228823 | Msa0580920:intron | 25.0% |
! | GCATCAATATCATTTACAAA+TGG | + | chr4_1:86228831-86228850 | Msa0580920:intron | 25.0% |
! | AATGCCTTTATTAAAAAGTC+AGG | + | chr4_1:86228871-86228890 | Msa0580920:intron | 25.0% |
! | ATGCCTTTATTAAAAAGTCA+GGG | + | chr4_1:86228872-86228891 | Msa0580920:intron | 25.0% |
! | AAAAAAACAGGTTAAGCAAA+AGG | - | chr4_1:86228915-86228934 | None:intergenic | 25.0% |
!!! | TAACCTGTTTTTTTTAATGC+AGG | + | chr4_1:86228921-86228940 | Msa0580920:intron | 25.0% |
! | TAATGATGTTGAGATGAAAT+TGG | + | chr4_1:86229064-86229083 | Msa0580920:CDS | 25.0% |
! | AAGGTTAAAAACATCTTCAT+CGG | - | chr4_1:86229300-86229319 | None:intergenic | 25.0% |
!!! | AATATTTTTAGCTAGCATCA+AGG | + | chr4_1:86229646-86229665 | Msa0580920:intron | 25.0% |
! | GCAATGACTATTAAGTATAA+AGG | + | chr4_1:86229671-86229690 | Msa0580920:intron | 25.0% |
! | CTATTAAGTATAAAGGATTG+TGG | + | chr4_1:86229678-86229697 | Msa0580920:intron | 25.0% |
!!! | TACAGATATTTGGTTTTAGA+TGG | - | chr4_1:86229761-86229780 | None:intergenic | 25.0% |
!!! | ATGCTTGTTTTACAGATATT+TGG | - | chr4_1:86229771-86229790 | None:intergenic | 25.0% |
!! | AAATGTAATTTTTGCAGGAA+GGG | - | chr4_1:86229816-86229835 | None:intergenic | 25.0% |
! | TAAGTAGACTAATTTAGCTA+TGG | - | chr4_1:86230103-86230122 | None:intergenic | 25.0% |
! | ATTTGTAAATATGTCCAAGA+AGG | + | chr4_1:86230407-86230426 | Msa0580920:CDS | 25.0% |
!!! | GCTTTTAGAAAATTGAGTTA+GGG | - | chr4_1:86230612-86230631 | None:intergenic | 25.0% |
!!! | AGCTTTTAGAAAATTGAGTT+AGG | - | chr4_1:86230613-86230632 | None:intergenic | 25.0% |
! | CTCTTCTAACTTTAATTGAT+GGG | + | chr4_1:86230831-86230850 | Msa0580920:CDS | 25.0% |
! | TCTTCTAACTTTAATTGATG+GGG | + | chr4_1:86230832-86230851 | Msa0580920:CDS | 25.0% |
! | CCACTAATAATAAGATTTCT+CGG | + | chr4_1:86230902-86230921 | Msa0580920:CDS | 25.0% |
! | TTAGAGTTCAAACAGAAATA+TGG | + | chr4_1:86230986-86231005 | Msa0580920:CDS | 25.0% |
! | TCAAATGTACAAGATATTTG+GGG | - | chr4_1:86231494-86231513 | None:intergenic | 25.0% |
! | CTCAAATGTACAAGATATTT+GGG | - | chr4_1:86231495-86231514 | None:intergenic | 25.0% |
! | TTGTACATTTGAGGATTTAT+AGG | + | chr4_1:86231502-86231521 | Msa0580920:three_prime_UTR | 25.0% |
AGTCTCTATACAATATTTCC+GGG | - | chr4_1:86225543-86225562 | None:intergenic | 30.0% | |
GAGAGATAAACATAAGAACA+CGG | - | chr4_1:86225590-86225609 | None:intergenic | 30.0% | |
TTAAGGAAGAAGAAACAAGT+GGG | - | chr4_1:86225612-86225631 | None:intergenic | 30.0% | |
ATTAAGGAAGAAGAAACAAG+TGG | - | chr4_1:86225613-86225632 | None:intergenic | 30.0% | |
TGTTTCTTCTTCCTTAATTC+TGG | + | chr4_1:86225615-86225634 | Msa0580920:five_prime_UTR | 30.0% | |
!!! | TAGTCATCTTACCGTTTTTT+AGG | + | chr4_1:86225773-86225792 | Msa0580920:intron | 30.0% |
! | ATCTTGCTCATTTTCATTGT+TGG | - | chr4_1:86225928-86225947 | None:intergenic | 30.0% |
AACAATGAAAATGAGCAAGA+TGG | + | chr4_1:86225927-86225946 | Msa0580920:intron | 30.0% | |
ATCCAACCAAGAAAATTACA+CGG | - | chr4_1:86225964-86225983 | None:intergenic | 30.0% | |
!!! | TGACTTTTTTATTCTGAAGC+TGG | + | chr4_1:86226066-86226085 | Msa0580920:intron | 30.0% |
! | ATTTGAAGTTGAACTGTAAC+TGG | + | chr4_1:86226257-86226276 | Msa0580920:five_prime_UTR | 30.0% |
!! | TTTTGTTTCATGGGAGAAAA+AGG | + | chr4_1:86226352-86226371 | Msa0580920:five_prime_UTR | 30.0% |
TTTGTTTCATGGGAGAAAAA+GGG | + | chr4_1:86226353-86226372 | Msa0580920:five_prime_UTR | 30.0% | |
AGAATATACAATCTCGGAAA+CGG | - | chr4_1:86226478-86226497 | None:intergenic | 30.0% | |
!!! | TTGCTCAACTGTTTTAAGAT+AGG | - | chr4_1:86226567-86226586 | None:intergenic | 30.0% |
AAAACAGTTGAGCAAAGAAA+AGG | + | chr4_1:86226572-86226591 | Msa0580920:CDS | 30.0% | |
TAATATCTCTTCCTCAGATA+TGG | - | chr4_1:86226868-86226887 | None:intergenic | 30.0% | |
AATTGAAAATGAGAAAGACC+GGG | + | chr4_1:86227028-86227047 | Msa0580920:CDS | 30.0% | |
GGATCAAATTATTGCTTTGT+TGG | + | chr4_1:86227067-86227086 | Msa0580920:CDS | 30.0% | |
! | TCTAAAGTAATGAAAGTCAG+AGG | - | chr4_1:86227305-86227324 | None:intergenic | 30.0% |
!!! | GATTGTTTCAAGGTTTTGTT+AGG | - | chr4_1:86227344-86227363 | None:intergenic | 30.0% |
TCAAGATTTGTGTGAACAAA+AGG | + | chr4_1:86227469-86227488 | Msa0580920:CDS | 30.0% | |
AAAAGGATCAACATAGAGAA+TGG | + | chr4_1:86227486-86227505 | Msa0580920:CDS | 30.0% | |
AAAGGATCAACATAGAGAAT+GGG | + | chr4_1:86227487-86227506 | Msa0580920:CDS | 30.0% | |
!!! | GGTTTTTTTCAGCAAGAATT+TGG | - | chr4_1:86227544-86227563 | None:intergenic | 30.0% |
ATTTCATATAGAAGGACATG+TGG | + | chr4_1:86227885-86227904 | Msa0580920:intron | 30.0% | |
TTGCATGTTTAATTGCATGA+TGG | - | chr4_1:86228109-86228128 | None:intergenic | 30.0% | |
AAATTGTGCATAGTTATGGA+GGG | - | chr4_1:86228135-86228154 | None:intergenic | 30.0% | |
GAATACATTGGAAAAGTTCA+AGG | + | chr4_1:86228314-86228333 | Msa0580920:CDS | 30.0% | |
TGATCAGAATGTTATACAGA+TGG | + | chr4_1:86228427-86228446 | Msa0580920:CDS | 30.0% | |
AAAAACTGTAGAGTAGAACA+TGG | - | chr4_1:86228769-86228788 | None:intergenic | 30.0% | |
! | CATCCCTGACTTTTTAATAA+AGG | - | chr4_1:86228878-86228897 | None:intergenic | 30.0% |
CTTTATTAAAAAGTCAGGGA+TGG | + | chr4_1:86228876-86228895 | Msa0580920:intron | 30.0% | |
GTTCCTGCATTAAAAAAAAC+AGG | - | chr4_1:86228927-86228946 | None:intergenic | 30.0% | |
AGATGATGTGAAGATGATTA+TGG | + | chr4_1:86228947-86228966 | Msa0580920:CDS | 30.0% | |
GATGATTATGGTCAAAATGT+TGG | + | chr4_1:86228959-86228978 | Msa0580920:CDS | 30.0% | |
CAAATAAGATCTCCTTATTG+TGG | - | chr4_1:86229004-86229023 | None:intergenic | 30.0% | |
! | TAGATTCTGAAGAGCTTTAA+GGG | - | chr4_1:86229093-86229112 | None:intergenic | 30.0% |
! | ATAGATTCTGAAGAGCTTTA+AGG | - | chr4_1:86229094-86229113 | None:intergenic | 30.0% |
TGTAGCTAACTAGAGAAAAA+AGG | - | chr4_1:86229319-86229338 | None:intergenic | 30.0% | |
ATAATATATTGTCGCACATC+AGG | - | chr4_1:86229347-86229366 | None:intergenic | 30.0% | |
GACATAAGGAATAAAATGTC+TGG | - | chr4_1:86229370-86229389 | None:intergenic | 30.0% | |
ATTGTGGTTCTTAGTTTCAT+TGG | + | chr4_1:86229694-86229713 | Msa0580920:intron | 30.0% | |
!! | AAACTGTTTCTGTGATCAAA+AGG | - | chr4_1:86229737-86229756 | None:intergenic | 30.0% |
! | AATGTAATTTTTGCAGGAAG+GGG | - | chr4_1:86229815-86229834 | None:intergenic | 30.0% |
! | GAAATGTAATTTTTGCAGGA+AGG | - | chr4_1:86229817-86229836 | None:intergenic | 30.0% |
TAACCAATACTAGAACTGAT+GGG | - | chr4_1:86230139-86230158 | None:intergenic | 30.0% | |
TTAACCAATACTAGAACTGA+TGG | - | chr4_1:86230140-86230159 | None:intergenic | 30.0% | |
!! | AGAAGAAATTGTTTCTGCTA+TGG | + | chr4_1:86230313-86230332 | Msa0580920:CDS | 30.0% |
!! | GAAGAAATTGTTTCTGCTAT+GGG | + | chr4_1:86230314-86230333 | Msa0580920:CDS | 30.0% |
! | TTTCTACCAACTTACTCTTT+TGG | - | chr4_1:86230448-86230467 | None:intergenic | 30.0% |
!! | AAGTTGGTAGAAAATTCTGT+TGG | + | chr4_1:86230455-86230474 | Msa0580920:CDS | 30.0% |
! | TTTTACAGTTCCAACAAACT+TGG | + | chr4_1:86230490-86230509 | Msa0580920:CDS | 30.0% |
AACAGTTATGATCCCAATTT+CGG | - | chr4_1:86230534-86230553 | None:intergenic | 30.0% | |
GCTCTTCTAACTTTAATTGA+TGG | + | chr4_1:86230830-86230849 | Msa0580920:CDS | 30.0% | |
CCGAGAAATCTTATTATTAG+TGG | - | chr4_1:86230905-86230924 | None:intergenic | 30.0% | |
TAATGGTAGCATTAAATCCT+TGG | + | chr4_1:86231051-86231070 | Msa0580920:CDS | 30.0% | |
! | TTGATTCGATTAATGTACTG+AGG | + | chr4_1:86231136-86231155 | Msa0580920:three_prime_UTR | 30.0% |
!! | TACATTGAGCTATTTCTTCA+TGG | + | chr4_1:86231355-86231374 | Msa0580920:three_prime_UTR | 30.0% |
TTTAGGCTACTGTTGTATTA+AGG | + | chr4_1:86231418-86231437 | Msa0580920:three_prime_UTR | 30.0% | |
CCTCAAATGTACAAGATATT+TGG | - | chr4_1:86231496-86231515 | None:intergenic | 30.0% | |
CCAAATATCTTGTACATTTG+AGG | + | chr4_1:86231493-86231512 | Msa0580920:three_prime_UTR | 30.0% | |
! | GAACACAATCATTCTAGAAA+GGG | - | chr4_1:86231559-86231578 | None:intergenic | 30.0% |
! | AGAACACAATCATTCTAGAA+AGG | - | chr4_1:86231560-86231579 | None:intergenic | 30.0% |
! | TCATTCCCGTGTAATTTTCT+TGG | + | chr4_1:86225955-86225974 | Msa0580920:intron | 35.0% |
TCCAACCAAGAAAATTACAC+GGG | - | chr4_1:86225963-86225982 | None:intergenic | 35.0% | |
AATTCTCTGTCTACTCTCTT+GGG | + | chr4_1:86226129-86226148 | Msa0580920:intron | 35.0% | |
AAGTTGAACTGTAACTGGTA+TGG | + | chr4_1:86226262-86226281 | Msa0580920:five_prime_UTR | 35.0% | |
CTGTTTGCAACTTCTGATTA+AGG | - | chr4_1:86226295-86226314 | None:intergenic | 35.0% | |
TTGTGCCACAAAAAAGACAA+TGG | + | chr4_1:86226395-86226414 | Msa0580920:exon | 35.0% | |
ACCAGCAGAATATACAATCT+CGG | - | chr4_1:86226484-86226503 | None:intergenic | 35.0% | |
AATAGCGTAGTTGAATGTCT+CGG | - | chr4_1:86226607-86226626 | None:intergenic | 35.0% | |
CTGGATCGTGAAATTAAAGA+TGG | + | chr4_1:86226633-86226652 | Msa0580920:CDS | 35.0% | |
AAGGTTATGTGACAATATGC+AGG | + | chr4_1:86226824-86226843 | Msa0580920:CDS | 35.0% | |
GCAAATTATTTGCATAGGAG+CGG | - | chr4_1:86226929-86226948 | None:intergenic | 35.0% | |
CTGTTGGAATTACAAAAGAG+CGG | + | chr4_1:86226967-86226986 | Msa0580920:CDS | 35.0% | |
! | AGAGAAGTGCAATTGAAAAG+TGG | + | chr4_1:86227255-86227274 | Msa0580920:CDS | 35.0% |
! | ATTGAAAAGTGGTTTGCAGA+AGG | + | chr4_1:86227266-86227285 | Msa0580920:CDS | 35.0% |
!!! | CTTTAGACACGTTGATTTTG+AGG | + | chr4_1:86227318-86227337 | Msa0580920:CDS | 35.0% |
GCAAGAATTTGGATAAGAAC+AGG | - | chr4_1:86227533-86227552 | None:intergenic | 35.0% | |
GGACGTGATTTCTTATATCA+CGG | - | chr4_1:86227565-86227584 | None:intergenic | 35.0% | |
ATGCTTGTAGGCTTGATTTA+GGG | - | chr4_1:86227754-86227773 | None:intergenic | 35.0% | |
AATGCTTGTAGGCTTGATTT+AGG | - | chr4_1:86227755-86227774 | None:intergenic | 35.0% | |
CCTACAAGCATTTACAGATA+GGG | + | chr4_1:86227763-86227782 | Msa0580920:intron | 35.0% | |
! | AATAGCACAACAGATTGGTT+AGG | + | chr4_1:86227969-86227988 | Msa0580920:intron | 35.0% |
! | AGTGTTTTGTCTGACTGTAA+AGG | - | chr4_1:86227996-86228015 | None:intergenic | 35.0% |
GAAATTGTGCATAGTTATGG+AGG | - | chr4_1:86228136-86228155 | None:intergenic | 35.0% | |
CAACATTTGCAATTCTTTCC+TGG | - | chr4_1:86228190-86228209 | None:intergenic | 35.0% | |
TCAAGGTTGCATACTACTAT+TGG | + | chr4_1:86228331-86228350 | Msa0580920:CDS | 35.0% | |
CTGTATAACATTCTGATCAG+AGG | - | chr4_1:86228426-86228445 | None:intergenic | 35.0% | |
CTACCTATGTAGGTACTTTA+GGG | - | chr4_1:86228620-86228639 | None:intergenic | 35.0% | |
ACTACCTATGTAGGTACTTT+AGG | - | chr4_1:86228621-86228640 | None:intergenic | 35.0% | |
AAACCATCTTAATCGCACTA+GGG | + | chr4_1:86228688-86228707 | Msa0580920:intron | 35.0% | |
!! | TACAGTTTTTGAGAGCTTCA+AGG | + | chr4_1:86228779-86228798 | Msa0580920:intron | 35.0% |
! | AAGGAGATCTTATTTGACAG+TGG | + | chr4_1:86229008-86229027 | Msa0580920:CDS | 35.0% |
TACATGTTCAGACAAACTTG+AGG | - | chr4_1:86229204-86229223 | None:intergenic | 35.0% | |
GCAGCAAGTTGCATAATTAT+GGG | - | chr4_1:86229230-86229249 | None:intergenic | 35.0% | |
TGCAGCAAGTTGCATAATTA+TGG | - | chr4_1:86229231-86229250 | None:intergenic | 35.0% | |
TTCCTGATATATGAAGCTGA+GGG | - | chr4_1:86229398-86229417 | None:intergenic | 35.0% | |
! | CGACATTGAATGACTACTTT+TGG | - | chr4_1:86229503-86229522 | None:intergenic | 35.0% |
TGGATGTGGAAGAACTTAAA+TGG | - | chr4_1:86229560-86229579 | None:intergenic | 35.0% | |
! | ATGTAATTTTTGCAGGAAGG+GGG | - | chr4_1:86229814-86229833 | None:intergenic | 35.0% |
! | AGTCGTTGGAAACAATTTTC+TGG | + | chr4_1:86229853-86229872 | Msa0580920:intron | 35.0% |
TTACCACACAAGACAGAAAA+TGG | - | chr4_1:86230010-86230029 | None:intergenic | 35.0% | |
CTGATTCACATGCTTTAGTA+CGG | - | chr4_1:86230246-86230265 | None:intergenic | 35.0% | |
! | TGAGTGATCTGTTGAACTTT+TGG | - | chr4_1:86230356-86230375 | None:intergenic | 35.0% |
TAAATATGTCCAAGAAGGCA+CGG | + | chr4_1:86230412-86230431 | Msa0580920:CDS | 35.0% | |
AGATCTCCAAAAGAGTAAGT+TGG | + | chr4_1:86230439-86230458 | Msa0580920:CDS | 35.0% | |
! | TTTTGCCATTCCAAGTTTGT+TGG | - | chr4_1:86230503-86230522 | None:intergenic | 35.0% |
TTAGTACAGTTGCTTGAAAG+TGG | + | chr4_1:86230554-86230573 | Msa0580920:CDS | 35.0% | |
TAGGCAAAATGATGATTCCA+CGG | - | chr4_1:86230732-86230751 | None:intergenic | 35.0% | |
! | GGAATCATCATTTTGCCTAT+TGG | + | chr4_1:86230733-86230752 | Msa0580920:CDS | 35.0% |
! | ATCATCATTTTGCCTATTGG+AGG | + | chr4_1:86230736-86230755 | Msa0580920:CDS | 35.0% |
GGAAAAGTCTCTTAATGCTT+TGG | + | chr4_1:86230946-86230965 | Msa0580920:CDS | 35.0% | |
TCTGTTTGAACTCTAATAGC+CGG | - | chr4_1:86230982-86231001 | None:intergenic | 35.0% | |
! | CTTTAGTTGACTTAACTCAG+CGG | + | chr4_1:86231026-86231045 | Msa0580920:CDS | 35.0% |
! | TTTAGTTGACTTAACTCAGC+GGG | + | chr4_1:86231027-86231046 | Msa0580920:CDS | 35.0% |
AGTCAAGCTAACTAACCATA+AGG | + | chr4_1:86231164-86231183 | Msa0580920:three_prime_UTR | 35.0% | |
CAAGAGAAGATTGAACCTTA+TGG | - | chr4_1:86231182-86231201 | None:intergenic | 35.0% | |
GAAATGGTACTCTTTGACAA+AGG | + | chr4_1:86231253-86231272 | Msa0580920:three_prime_UTR | 35.0% | |
TATTAAGGTAGGATCACCAT+TGG | + | chr4_1:86231433-86231452 | Msa0580920:three_prime_UTR | 35.0% | |
ATAAATCCCTACATGTCCAA+TGG | - | chr4_1:86231452-86231471 | None:intergenic | 35.0% | |
TGGACATGTAGGGATTTATT+TGG | + | chr4_1:86231453-86231472 | Msa0580920:three_prime_UTR | 35.0% | |
TAGACATTGCAAGAAGAGAG+TGG | + | chr4_1:86225471-86225490 | Msa0580920:five_prime_UTR | 40.0% | |
!! | GTATTGACTTTGGACCATGA+AGG | + | chr4_1:86225511-86225530 | Msa0580920:five_prime_UTR | 40.0% |
! | TCCCGTGTAATTTTCTTGGT+TGG | + | chr4_1:86225959-86225978 | Msa0580920:intron | 40.0% |
GAATTCTCTGTCTACTCTCT+TGG | + | chr4_1:86226128-86226147 | Msa0580920:intron | 40.0% | |
!!! | GAGAGCCATTGTCTTTTTTG+TGG | - | chr4_1:86226403-86226422 | None:intergenic | 40.0% |
TCCGAGATTGTATATTCTGC+TGG | + | chr4_1:86226480-86226499 | Msa0580920:CDS | 40.0% | |
GAGATTGTATATTCTGCTGG+TGG | + | chr4_1:86226483-86226502 | Msa0580920:CDS | 40.0% | |
GACATTCAACTACGCTATTG+AGG | + | chr4_1:86226608-86226627 | Msa0580920:CDS | 40.0% | |
AGAATGTAGCAAGAAGAGCA+AGG | + | chr4_1:86226671-86226690 | Msa0580920:CDS | 40.0% | |
GTGCTTCAAGCGCTTAAAAA+CGG | - | chr4_1:86226721-86226740 | None:intergenic | 40.0% | |
CTTCAATTATTCCGGCAGAA+AGG | - | chr4_1:86226797-86226816 | None:intergenic | 40.0% | |
TATGCAGGCAGCTGAATTTA+AGG | + | chr4_1:86226839-86226858 | Msa0580920:CDS | 40.0% | |
! | ATTTAAGGCAGCCATATCTG+AGG | + | chr4_1:86226854-86226873 | Msa0580920:CDS | 40.0% |
GAAAATTGAGTCAGCGATAC+AGG | + | chr4_1:86226890-86226909 | Msa0580920:CDS | 40.0% | |
!! | TTCCTTTTCCCTAGTTGATG+AGG | - | chr4_1:86227108-86227127 | None:intergenic | 40.0% |
TTCGCCAAACGAGATTCTTT+GGG | + | chr4_1:86227137-86227156 | Msa0580920:CDS | 40.0% | |
GGGCAATAAAAGGACTGTAA+AGG | - | chr4_1:86227179-86227198 | None:intergenic | 40.0% | |
! | GTCCTTTTATTGCCCCATTA+CGG | + | chr4_1:86227184-86227203 | Msa0580920:CDS | 40.0% |
! | TCCTTTTATTGCCCCATTAC+GGG | + | chr4_1:86227185-86227204 | Msa0580920:CDS | 40.0% |
ATGAGAGAGAAAATCCAGTC+TGG | + | chr4_1:86227410-86227429 | Msa0580920:CDS | 40.0% | |
GAAGGATAATGAAGATGCCA+AGG | + | chr4_1:86227607-86227626 | Msa0580920:CDS | 40.0% | |
GCCTACAAGCATTTACAGAT+AGG | + | chr4_1:86227762-86227781 | Msa0580920:intron | 40.0% | |
CCCTATCTGTAAATGCTTGT+AGG | - | chr4_1:86227766-86227785 | None:intergenic | 40.0% | |
TCTTTCCTGGAAAACCTTCA+GGG | - | chr4_1:86228177-86228196 | None:intergenic | 40.0% | |
TTCTTTCCTGGAAAACCTTC+AGG | - | chr4_1:86228178-86228197 | None:intergenic | 40.0% | |
AGTCTATTGTCCGTTCTCTT+GGG | + | chr4_1:86228222-86228241 | Msa0580920:CDS | 40.0% | |
AAGAGATGCAACAGAGTTAC+TGG | + | chr4_1:86228388-86228407 | Msa0580920:CDS | 40.0% | |
GAAGGTTCAAGATAAACCTG+CGG | - | chr4_1:86228492-86228511 | None:intergenic | 40.0% | |
! | CTATGTAGGTACTTTAGGGA+AGG | - | chr4_1:86228616-86228635 | None:intergenic | 40.0% |
! | CTTCCCTAAAGTACCTACAT+AGG | + | chr4_1:86228614-86228633 | Msa0580920:intron | 40.0% |
GAAACCATCTTAATCGCACT+AGG | + | chr4_1:86228687-86228706 | Msa0580920:intron | 40.0% | |
GGTCAAAATGTTGGCAGAAA+TGG | + | chr4_1:86228968-86228987 | Msa0580920:CDS | 40.0% | |
GGACTTGAAATGATTCGACA+AGG | + | chr4_1:86229131-86229150 | Msa0580920:CDS | 40.0% | |
TGTTCAGACAAACTTGAGGA+AGG | - | chr4_1:86229200-86229219 | None:intergenic | 40.0% | |
TCGGACTCTAACAATGAAAC+TGG | - | chr4_1:86229281-86229300 | None:intergenic | 40.0% | |
GTTCCTGATATATGAAGCTG+AGG | - | chr4_1:86229399-86229418 | None:intergenic | 40.0% | |
TATCAGGAACAAGCTAAGAG+AGG | + | chr4_1:86229409-86229428 | Msa0580920:CDS | 40.0% | |
TCATTCAATGTCGTCAAAGC+AGG | + | chr4_1:86229510-86229529 | Msa0580920:intron | 40.0% | |
GCTAAACAGTAAGATGGATG+TGG | - | chr4_1:86229574-86229593 | None:intergenic | 40.0% | |
TGGCATGCTAAACAGTAAGA+TGG | - | chr4_1:86229580-86229599 | None:intergenic | 40.0% | |
!! | TCATTGGTACTGATTCCTCA+TGG | + | chr4_1:86229710-86229729 | Msa0580920:intron | 40.0% |
! | TGTAATTTTTGCAGGAAGGG+GGG | - | chr4_1:86229813-86229832 | None:intergenic | 40.0% |
AATTGTTTCCAACGACTCAC+TGG | - | chr4_1:86229850-86229869 | None:intergenic | 40.0% | |
! | CTACCATTTTCTGTCTTGTG+TGG | + | chr4_1:86230004-86230023 | Msa0580920:intron | 40.0% |
!! | TGTGAAGTTGTTTTCTTGCC+TGG | + | chr4_1:86230199-86230218 | Msa0580920:CDS | 40.0% |
CTTCATCACAACTTTCTACC+AGG | - | chr4_1:86230220-86230239 | None:intergenic | 40.0% | |
CAGATGAAGATTTCAGCATC+TGG | - | chr4_1:86230289-86230308 | None:intergenic | 40.0% | |
AAGTTCAACAGATCACTCAG+TGG | + | chr4_1:86230357-86230376 | Msa0580920:CDS | 40.0% | |
CAGTTCCAACAAACTTGGAA+TGG | + | chr4_1:86230495-86230514 | Msa0580920:CDS | 40.0% | |
! | AAAAGAGTGCAGCCGAAATT+GGG | + | chr4_1:86230519-86230538 | Msa0580920:CDS | 40.0% |
! | AAGAGACTTTTCCTGCAATC+CGG | - | chr4_1:86230939-86230958 | None:intergenic | 40.0% |
!! | AGTCTCTTAATGCTTTGGAG+AGG | + | chr4_1:86230951-86230970 | Msa0580920:CDS | 40.0% |
!!! | ATGCTTTGGAGAGGATTTTC+CGG | + | chr4_1:86230960-86230979 | Msa0580920:CDS | 40.0% |
CGCTGAGTTAAGTCAACTAA+AGG | - | chr4_1:86231028-86231047 | None:intergenic | 40.0% | |
! | TTAGTTGACTTAACTCAGCG+GGG | + | chr4_1:86231028-86231047 | Msa0580920:CDS | 40.0% |
TTCTCTTGATCCTTTGAGTG+TGG | + | chr4_1:86231194-86231213 | Msa0580920:three_prime_UTR | 40.0% | |
! | TTTTGTCATGCCACACTCAA+AGG | - | chr4_1:86231207-86231226 | None:intergenic | 40.0% |
TTCCTCATGCTGGTAACTAT+GGG | + | chr4_1:86231316-86231335 | Msa0580920:three_prime_UTR | 40.0% | |
TCAATGTAGAGCTACAACCT+TGG | - | chr4_1:86231343-86231362 | None:intergenic | 40.0% | |
GGCTACTGTTGTATTAAGGT+AGG | + | chr4_1:86231422-86231441 | Msa0580920:three_prime_UTR | 40.0% | |
TGCAAGAAGAGAGTGGTCAA+AGG | + | chr4_1:86225478-86225497 | Msa0580920:five_prime_UTR | 45.0% | |
GTGAAGGGGAAATGAAAGCA+TGG | - | chr4_1:86225658-86225677 | None:intergenic | 45.0% | |
TGAGAAATAGCTTCCGAAGC+AGG | - | chr4_1:86226444-86226463 | None:intergenic | 45.0% | |
! | TGGTGGTGTCCTTGTGAATA+AGG | + | chr4_1:86226500-86226519 | Msa0580920:CDS | 45.0% |
CAACTACGCTATTGAGGTTC+TGG | + | chr4_1:86226614-86226633 | Msa0580920:CDS | 45.0% | |
ACAACACAAGCGAGATTAGC+AGG | + | chr4_1:86226739-86226758 | Msa0580920:CDS | 45.0% | |
CAACACAAGCGAGATTAGCA+GGG | + | chr4_1:86226740-86226759 | Msa0580920:CDS | 45.0% | |
CTTCTTCCTTTGGCTACATC+AGG | + | chr4_1:86226771-86226790 | Msa0580920:CDS | 45.0% | |
CTTCTCATTGCAGATGCTGT+TGG | + | chr4_1:86226951-86226970 | Msa0580920:CDS | 45.0% | |
AGCCTCATCAACTAGGGAAA+AGG | + | chr4_1:86227103-86227122 | Msa0580920:CDS | 45.0% | |
CTTCGCCAAACGAGATTCTT+TGG | + | chr4_1:86227136-86227155 | Msa0580920:CDS | 45.0% | |
AGTGCCCAAAGAATCTCGTT+TGG | - | chr4_1:86227144-86227163 | None:intergenic | 45.0% | |
AAGGACTGTAAAGGCTCCAA+CGG | - | chr4_1:86227170-86227189 | None:intergenic | 45.0% | |
ACCATAACATCGCCCGTAAT+GGG | - | chr4_1:86227200-86227219 | None:intergenic | 45.0% | |
AACCATAACATCGCCCGTAA+TGG | - | chr4_1:86227201-86227220 | None:intergenic | 45.0% | |
ACCCTGTGGAAACTTCATCA+GGG | + | chr4_1:86227222-86227241 | Msa0580920:CDS | 45.0% | |
ATCCAGTCTGGAGATGAAGT+TGG | + | chr4_1:86227422-86227441 | Msa0580920:CDS | 45.0% | |
GGATCAACATAGAGAATGGG+TGG | + | chr4_1:86227490-86227509 | Msa0580920:CDS | 45.0% | |
ACATAGAGAATGGGTGGTAC+TGG | + | chr4_1:86227496-86227515 | Msa0580920:CDS | 45.0% | |
TATCCTTCACCAGCATGCAA+AGG | - | chr4_1:86227595-86227614 | None:intergenic | 45.0% | |
TTAGGGCTGCTTATTGCATG+AGG | - | chr4_1:86227737-86227756 | None:intergenic | 45.0% | |
ATATTGTCCCCTAACCCTGA+AGG | + | chr4_1:86228160-86228179 | Msa0580920:intron | 45.0% | |
TGGAAAACCTTCAGGGTTAG+GGG | - | chr4_1:86228170-86228189 | None:intergenic | 45.0% | |
CTGGAAAACCTTCAGGGTTA+GGG | - | chr4_1:86228171-86228190 | None:intergenic | 45.0% | |
GAGTCTATTGTCCGTTCTCT+TGG | + | chr4_1:86228221-86228240 | Msa0580920:CDS | 45.0% | |
TTCAAGATAAACCTGCGGAG+AGG | - | chr4_1:86228487-86228506 | None:intergenic | 45.0% | |
ACTCCCTAGTGCGATTAAGA+TGG | - | chr4_1:86228694-86228713 | None:intergenic | 45.0% | |
AAAAAGTCAGGGATGGTGTG+AGG | + | chr4_1:86228883-86228902 | Msa0580920:intron | 45.0% | |
GGAGTCAACAGACCACAATA+AGG | + | chr4_1:86228989-86229008 | Msa0580920:CDS | 45.0% | |
CAGACAAACTTGAGGAAGGA+AGG | - | chr4_1:86229196-86229215 | None:intergenic | 45.0% | |
AACTGGTGTCTGTGTATCGT+GGG | - | chr4_1:86229264-86229283 | None:intergenic | 45.0% | |
AAACTGGTGTCTGTGTATCG+TGG | - | chr4_1:86229265-86229284 | None:intergenic | 45.0% | |
CTGTGATCAAAAGGACCATG+AGG | - | chr4_1:86229728-86229747 | None:intergenic | 45.0% | |
CAAAAGATAACCAACCTGCC+AGG | - | chr4_1:86230040-86230059 | None:intergenic | 45.0% | |
! | GTGCCCATCAGTTCTAGTAT+TGG | + | chr4_1:86230133-86230152 | Msa0580920:intron | 45.0% |
!! | ACTCAGTGGCTTTATGATGC+CGG | + | chr4_1:86230371-86230390 | Msa0580920:CDS | 45.0% |
ACAAATGATTGACAGTGCCC+CGG | - | chr4_1:86230393-86230412 | None:intergenic | 45.0% | |
GATCTTTATCCGTGCCTTCT+TGG | - | chr4_1:86230424-86230443 | None:intergenic | 45.0% | |
! | CAAAAGAGTGCAGCCGAAAT+TGG | + | chr4_1:86230518-86230537 | Msa0580920:CDS | 45.0% |
TTCTCAGCTCAAACAGAAGC+CGG | + | chr4_1:86230680-86230699 | Msa0580920:CDS | 45.0% | |
ACCACCATGAACTAAGCATC+CGG | - | chr4_1:86230702-86230721 | None:intergenic | 45.0% | |
GAGCACTAGCAAAGACTCTT+GGG | + | chr4_1:86230771-86230790 | Msa0580920:CDS | 45.0% | |
AGCACTAGCAAAGACTCTTG+GGG | + | chr4_1:86230772-86230791 | Msa0580920:CDS | 45.0% | |
! | AGAGACTTTTCCTGCAATCC+GGG | - | chr4_1:86230938-86230957 | None:intergenic | 45.0% |
ATCCTTGGCAGCTCGAATAT+TGG | + | chr4_1:86231066-86231085 | Msa0580920:CDS | 45.0% | |
AACCGTTGCAAACTCCAACT+TGG | + | chr4_1:86231226-86231245 | Msa0580920:three_prime_UTR | 45.0% | |
! | GTCCAAGTTGGAGTTTGCAA+CGG | - | chr4_1:86231231-86231250 | None:intergenic | 45.0% |
TTGCAAACTCCAACTTGGAC+AGG | + | chr4_1:86231231-86231250 | Msa0580920:three_prime_UTR | 45.0% | |
ACTCCAACTTGGACAGGAAA+TGG | + | chr4_1:86231237-86231256 | Msa0580920:three_prime_UTR | 45.0% | |
GTACCATTTCCTGTCCAAGT+TGG | - | chr4_1:86231243-86231262 | None:intergenic | 45.0% | |
GCAGCAGCATGATATTGATG+TGG | + | chr4_1:86231293-86231312 | Msa0580920:three_prime_UTR | 45.0% | |
ATTGATGTGGTTCCTCATGC+TGG | + | chr4_1:86231306-86231325 | Msa0580920:three_prime_UTR | 45.0% | |
GTTCCTCATGCTGGTAACTA+TGG | + | chr4_1:86231315-86231334 | Msa0580920:three_prime_UTR | 45.0% | |
AGGATCACCATTGGACATGT+AGG | + | chr4_1:86231442-86231461 | Msa0580920:three_prime_UTR | 45.0% | |
GGATCACCATTGGACATGTA+GGG | + | chr4_1:86231443-86231462 | Msa0580920:three_prime_UTR | 45.0% | |
!! | AAAAAATAAAAATAAGAATA+AGG | - | chr4_1:86225862-86225881 | None:intergenic | 5.0% |
!! | AAATTTATAATAAAGAATAA+GGG | - | chr4_1:86228085-86228104 | None:intergenic | 5.0% |
!! | TAAATTTATAATAAAGAATA+AGG | - | chr4_1:86228086-86228105 | None:intergenic | 5.0% |
!! | TTATAATATAAATATTATCA+AGG | - | chr4_1:86230076-86230095 | None:intergenic | 5.0% |
TTTCCGGGAAGACTCCTTCA+TGG | - | chr4_1:86225528-86225547 | None:intergenic | 50.0% | |
TTCATTTCCCCTTCACCTCC+AGG | + | chr4_1:86225662-86225681 | Msa0580920:five_prime_UTR | 50.0% | |
GCTCTCGATTCATTGACGTC+TGG | + | chr4_1:86226417-86226436 | Msa0580920:CDS | 50.0% | |
ATTGACGTCTGGTCCTGCTT+CGG | + | chr4_1:86226428-86226447 | Msa0580920:CDS | 50.0% | |
! | GGCACTTGGTCTTCTTCCTT+TGG | + | chr4_1:86226761-86226780 | Msa0580920:CDS | 50.0% |
GAAAGGCCTGATGTAGCCAA+AGG | - | chr4_1:86226780-86226799 | None:intergenic | 50.0% | |
CCATTTGTATGGCTTCAGCC+CGG | - | chr4_1:86227049-86227068 | None:intergenic | 50.0% | |
!! | CCTAGTTGATGAGGCTGCAT+CGG | - | chr4_1:86227099-86227118 | None:intergenic | 50.0% |
CGATGCAGCCTCATCAACTA+GGG | + | chr4_1:86227097-86227116 | Msa0580920:CDS | 50.0% | |
TTCTTTGGGCACTCAACCGT+TGG | + | chr4_1:86227151-86227170 | Msa0580920:CDS | 50.0% | |
! | GCCCGTAATGGGGCAATAAA+AGG | - | chr4_1:86227189-86227208 | None:intergenic | 50.0% |
CCATAACATCGCCCGTAATG+GGG | - | chr4_1:86227199-86227218 | None:intergenic | 50.0% | |
CGATGTTATGGTTGACCCTG+TGG | + | chr4_1:86227208-86227227 | Msa0580920:CDS | 50.0% | |
GACCCTGTGGAAACTTCATC+AGG | + | chr4_1:86227221-86227240 | Msa0580920:CDS | 50.0% | |
GCCCTGATGAAGTTTCCACA+GGG | - | chr4_1:86227226-86227245 | None:intergenic | 50.0% | |
TGCCCTGATGAAGTTTCCAC+AGG | - | chr4_1:86227227-86227246 | None:intergenic | 50.0% | |
CTCCAACTTCATCTCCAGAC+TGG | - | chr4_1:86227427-86227446 | None:intergenic | 50.0% | |
CCAGCATGCAAAGGATGACA+AGG | - | chr4_1:86227586-86227605 | None:intergenic | 50.0% | |
CCTTGTCATCCTTTGCATGC+TGG | + | chr4_1:86227583-86227602 | Msa0580920:CDS | 50.0% | |
CATCCTTTGCATGCTGGTGA+AGG | + | chr4_1:86227589-86227608 | Msa0580920:CDS | 50.0% | |
GCTGCTTATTGCATGAGGAG+AGG | - | chr4_1:86227732-86227751 | None:intergenic | 50.0% | |
CCTGGAAAACCTTCAGGGTT+AGG | - | chr4_1:86228172-86228191 | None:intergenic | 50.0% | |
! | CCTAACCCTGAAGGTTTTCC+AGG | + | chr4_1:86228169-86228188 | Msa0580920:intron | 50.0% |
TCGTTTGGGGGAAAGGAAGT+TGG | + | chr4_1:86228247-86228266 | Msa0580920:CDS | 50.0% | |
TTTGGGGGAAAGGAAGTTGG+CGG | + | chr4_1:86228250-86228269 | Msa0580920:CDS | 50.0% | |
GGTGACTATGTCTAGCAGTG+AGG | + | chr4_1:86228352-86228371 | Msa0580920:CDS | 50.0% | |
TGTGAGACCAAGCGAAGAAG+AGG | - | chr4_1:86229044-86229063 | None:intergenic | 50.0% | |
TTGAGGAAGGAAGGCTATGC+TGG | - | chr4_1:86229187-86229206 | None:intergenic | 50.0% | |
TGTCTGTGTATCGTGGGAGA+TGG | - | chr4_1:86229258-86229277 | None:intergenic | 50.0% | |
CGCCCTCAGCTTCATATATC+AGG | + | chr4_1:86229393-86229412 | Msa0580920:CDS | 50.0% | |
ATGAAGGTCCAGTGAGTCGT+TGG | + | chr4_1:86229839-86229858 | Msa0580920:intron | 50.0% | |
TTGTGTGGTAAGCTAGCACC+TGG | + | chr4_1:86230019-86230038 | Msa0580920:intron | 50.0% | |
CAGCACTTGCTCGAAGACTT+AGG | - | chr4_1:86230181-86230200 | None:intergenic | 50.0% | |
!! | CTCAGTGGCTTTATGATGCC+GGG | + | chr4_1:86230372-86230391 | Msa0580920:CDS | 50.0% |
!! | TCAGTGGCTTTATGATGCCG+GGG | + | chr4_1:86230373-86230392 | Msa0580920:CDS | 50.0% |
AGTCCAATGCCAAAGCGCAA+GGG | + | chr4_1:86230647-86230666 | Msa0580920:CDS | 50.0% | |
AATCCCTTGCGCTTTGGCAT+TGG | - | chr4_1:86230653-86230672 | None:intergenic | 50.0% | |
! | TGCCAAAGCGCAAGGGATTT+TGG | + | chr4_1:86230654-86230673 | Msa0580920:CDS | 50.0% |
CACCAAAATCCCTTGCGCTT+TGG | - | chr4_1:86230659-86230678 | None:intergenic | 50.0% | |
GAAGCCGGATGCTTAGTTCA+TGG | + | chr4_1:86230695-86230714 | Msa0580920:CDS | 50.0% | |
CTATTGGAGGCTGATGCAGT+GGG | + | chr4_1:86230749-86230768 | Msa0580920:CDS | 50.0% | |
! | GGAGCACTAGCAAAGACTCT+TGG | + | chr4_1:86230770-86230789 | Msa0580920:CDS | 50.0% |
ACTCTTGGGGACTCTGATCT+TGG | + | chr4_1:86230785-86230804 | Msa0580920:CDS | 50.0% | |
GATGGGGAAAAGCTACAGAG+TGG | + | chr4_1:86230848-86230867 | Msa0580920:CDS | 50.0% | |
! | AGACTTTTCCTGCAATCCGG+GGG | - | chr4_1:86230936-86230955 | None:intergenic | 50.0% |
! | GAGACTTTTCCTGCAATCCG+GGG | - | chr4_1:86230937-86230956 | None:intergenic | 50.0% |
GACTTAACTCAGCGGGGTAA+TGG | + | chr4_1:86231034-86231053 | Msa0580920:CDS | 50.0% | |
TGCCAATATTCGAGCTGCCA+AGG | - | chr4_1:86231071-86231090 | None:intergenic | 50.0% | |
GTCCCATAGTTACCAGCATG+AGG | - | chr4_1:86231321-86231340 | None:intergenic | 50.0% | |
TGCTGGTAACTATGGGACCA+AGG | + | chr4_1:86231323-86231342 | Msa0580920:three_prime_UTR | 50.0% | |
GGACCATGAAGGAGTCTTCC+CGG | + | chr4_1:86225522-86225541 | Msa0580920:five_prime_UTR | 55.0% | |
AGAGAGACCTGGAGGTGAAG+GGG | - | chr4_1:86225672-86225691 | None:intergenic | 55.0% | |
GAGAGAGACCTGGAGGTGAA+GGG | - | chr4_1:86225673-86225692 | None:intergenic | 55.0% | |
AGAGAGAGACCTGGAGGTGA+AGG | - | chr4_1:86225674-86225693 | None:intergenic | 55.0% | |
AGAGAGAGAGAGAGACCTGG+AGG | - | chr4_1:86225680-86225699 | None:intergenic | 55.0% | |
GAGAGAGAGAGAGAGAGACC+TGG | - | chr4_1:86225683-86225702 | None:intergenic | 55.0% | |
! | AGCGAGATTAGCAGGGCACT+TGG | + | chr4_1:86226747-86226766 | Msa0580920:CDS | 55.0% |
GCTACATCAGGCCTTTCTGC+CGG | + | chr4_1:86226783-86226802 | Msa0580920:CDS | 55.0% | |
CCGGGCTGAAGCCATACAAA+TGG | + | chr4_1:86227046-86227065 | Msa0580920:CDS | 55.0% | |
CCGATGCAGCCTCATCAACT+AGG | + | chr4_1:86227096-86227115 | Msa0580920:CDS | 55.0% | |
CCCCATTACGGGCGATGTTA+TGG | + | chr4_1:86227196-86227215 | Msa0580920:CDS | 55.0% | |
CCAAACGACGCCCAAGAGAA+CGG | - | chr4_1:86228235-86228254 | None:intergenic | 55.0% | |
! | CGTTCTCTTGGGCGTCGTTT+GGG | + | chr4_1:86228233-86228252 | Msa0580920:CDS | 55.0% |
! | GTTCTCTTGGGCGTCGTTTG+GGG | + | chr4_1:86228234-86228253 | Msa0580920:CDS | 55.0% |
! | TTCTCTTGGGCGTCGTTTGG+GGG | + | chr4_1:86228235-86228254 | Msa0580920:CDS | 55.0% |
GTTGGCGGTGGCATTACTTC+TGG | + | chr4_1:86228265-86228284 | Msa0580920:CDS | 55.0% | |
TCTGCCTCCTCTTCTTCGCT+TGG | + | chr4_1:86229034-86229053 | Msa0580920:CDS | 55.0% | |
GAGACCAAGCGAAGAAGAGG+AGG | - | chr4_1:86229041-86229060 | None:intergenic | 55.0% | |
AGCTGAGGGCGAGTGACATA+AGG | - | chr4_1:86229384-86229403 | None:intergenic | 55.0% | |
TAAGCTAGCACCTGGCAGGT+TGG | + | chr4_1:86230027-86230046 | Msa0580920:intron | 55.0% | |
CAGTCCAATGCCAAAGCGCA+AGG | + | chr4_1:86230646-86230665 | Msa0580920:CDS | 55.0% | |
GCCGGATGCTTAGTTCATGG+TGG | + | chr4_1:86230698-86230717 | Msa0580920:CDS | 55.0% | |
! | TCATGGTGGTGTATGCACCG+TGG | + | chr4_1:86230712-86230731 | Msa0580920:CDS | 55.0% |
CCACTGCATCAGCCTCCAAT+AGG | - | chr4_1:86230751-86230770 | None:intergenic | 55.0% | |
CCTATTGGAGGCTGATGCAG+TGG | + | chr4_1:86230748-86230767 | Msa0580920:CDS | 55.0% | |
TTTCCTGCAATCCGGGGGAA+GGG | - | chr4_1:86230931-86230950 | None:intergenic | 55.0% | |
! | TTTTCCTGCAATCCGGGGGA+AGG | - | chr4_1:86230932-86230951 | None:intergenic | 55.0% |
! | CCGTTCTCTTGGGCGTCGTT+TGG | + | chr4_1:86228232-86228251 | Msa0580920:CDS | 60.0% |
! | TTGGGCGTCGTTTGGGGGAA+AGG | + | chr4_1:86228240-86228259 | Msa0580920:CDS | 60.0% |
TTATTGCAGCGCCTCTCCGC+AGG | + | chr4_1:86228473-86228492 | Msa0580920:CDS | 60.0% | |
GTGGTAAGCTAGCACCTGGC+AGG | + | chr4_1:86230023-86230042 | Msa0580920:intron | 60.0% | |
TTTCTCGGTTCCCCTTCCCC+CGG | + | chr4_1:86230917-86230936 | Msa0580920:CDS | 60.0% | |
TTCCTGCAATCCGGGGGAAG+GGG | - | chr4_1:86230930-86230949 | None:intergenic | 60.0% | |
GGGGGAAAGGAAGTTGGCGG+TGG | + | chr4_1:86228253-86228272 | Msa0580920:CDS | 65.0% | |
TTCCCCTTCCCCCGGATTGC+AGG | + | chr4_1:86230925-86230944 | Msa0580920:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 86225451 | 86231616 | 86225451 | ID=Msa0580920;Name=Msa0580920 |
chr4_1 | mRNA | 86225451 | 86231616 | 86225451 | ID=Msa0580920-mRNA-1;Parent=Msa0580920;Name=Msa0580920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=392|1|1|1|0.75|0.6|5|487|1000 |
chr4_1 | exon | 86225451 | 86225683 | 86225451 | ID=Msa0580920-mRNA-1:exon:31819;Parent=Msa0580920-mRNA-1 |
chr4_1 | exon | 86226255 | 86227628 | 86226255 | ID=Msa0580920-mRNA-1:exon:31820;Parent=Msa0580920-mRNA-1 |
chr4_1 | exon | 86228191 | 86228494 | 86228191 | ID=Msa0580920-mRNA-1:exon:31821;Parent=Msa0580920-mRNA-1 |
chr4_1 | exon | 86228943 | 86229430 | 86228943 | ID=Msa0580920-mRNA-1:exon:31822;Parent=Msa0580920-mRNA-1 |
chr4_1 | exon | 86230134 | 86231616 | 86230134 | ID=Msa0580920-mRNA-1:exon:31823;Parent=Msa0580920-mRNA-1 |
chr4_1 | five_prime_UTR | 86225451 | 86225683 | 86225451 | ID=Msa0580920-mRNA-1:five_prime_utr;Parent=Msa0580920-mRNA-1 |
chr4_1 | five_prime_UTR | 86226255 | 86226413 | 86226255 | ID=Msa0580920-mRNA-1:five_prime_utr;Parent=Msa0580920-mRNA-1 |
chr4_1 | CDS | 86226414 | 86227628 | 86226414 | ID=Msa0580920-mRNA-1:cds;Parent=Msa0580920-mRNA-1 |
chr4_1 | CDS | 86228191 | 86228494 | 86228191 | ID=Msa0580920-mRNA-1:cds;Parent=Msa0580920-mRNA-1 |
chr4_1 | CDS | 86228943 | 86229430 | 86228943 | ID=Msa0580920-mRNA-1:cds;Parent=Msa0580920-mRNA-1 |
chr4_1 | CDS | 86230134 | 86231129 | 86230134 | ID=Msa0580920-mRNA-1:cds;Parent=Msa0580920-mRNA-1 |
chr4_1 | three_prime_UTR | 86231130 | 86231616 | 86231130 | ID=Msa0580920-mRNA-1:three_prime_utr;Parent=Msa0580920-mRNA-1 |
Gene Sequence |
Protein sequence |