Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561250 | XP_013457318.1 | 90.826 | 436 | 37 | 3 | 1 | 434 | 1 | 435 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561250 | A0A072UNJ1 | 90.826 | 436 | 37 | 3 | 1 | 434 | 1 | 435 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0103860 | Msa0561250 | 0.804862 | 1.762129e-49 | -8.615850e-47 |
| Msa0271580 | Msa0561250 | 0.826317 | 2.898410e-54 | -8.615850e-47 |
| Msa0561250 | Msa0615340 | 0.868443 | 6.504335e-66 | -8.615850e-47 |
| Msa0561250 | Msa0615360 | 0.810594 | 1.066721e-50 | -8.615850e-47 |
| Msa0561250 | Msa0654690 | 0.819254 | 1.278950e-52 | -8.615850e-47 |
| Msa0561250 | Msa0698370 | 0.879437 | 1.247351e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561250 | MtrunA17_Chr4g0051711 | 90.826 | 436 | 37 | 3 | 1 | 434 | 1 | 435 | 0.0 | 818 |
| Msa0561250 | MtrunA17_Chr4g0051681 | 86.530 | 438 | 54 | 5 | 1 | 434 | 1 | 437 | 0.0 | 776 |
| Msa0561250 | MtrunA17_Chr4g0051701 | 83.023 | 430 | 69 | 4 | 1 | 427 | 1 | 429 | 0.0 | 737 |
| Msa0561250 | MtrunA17_Chr4g0051821 | 82.093 | 430 | 74 | 3 | 1 | 428 | 1 | 429 | 0.0 | 736 |
| Msa0561250 | MtrunA17_Chr4g0051731 | 84.360 | 422 | 55 | 3 | 14 | 434 | 1 | 412 | 0.0 | 736 |
| Msa0561250 | MtrunA17_Chr6g0468811 | 78.802 | 434 | 89 | 3 | 1 | 432 | 1 | 433 | 0.0 | 726 |
| Msa0561250 | MtrunA17_Chr4g0051761 | 81.542 | 428 | 68 | 3 | 1 | 426 | 23 | 441 | 0.0 | 714 |
| Msa0561250 | MtrunA17_Chr6g0468791 | 77.412 | 425 | 90 | 3 | 3 | 426 | 2 | 421 | 0.0 | 677 |
| Msa0561250 | MtrunA17_Chr2g0292611 | 59.908 | 434 | 142 | 5 | 3 | 411 | 22 | 448 | 0.0 | 537 |
| Msa0561250 | MtrunA17_Chr1g0173761 | 60.048 | 418 | 155 | 5 | 1 | 413 | 1 | 411 | 0.0 | 536 |
| Msa0561250 | MtrunA17_Chr2g0292621 | 61.111 | 414 | 150 | 4 | 1 | 410 | 1 | 407 | 0.0 | 533 |
| Msa0561250 | MtrunA17_Chr2g0292581 | 59.569 | 418 | 157 | 5 | 1 | 413 | 1 | 411 | 0.0 | 531 |
| Msa0561250 | MtrunA17_Chr1g0173751 | 62.435 | 386 | 136 | 3 | 29 | 412 | 32 | 410 | 0.0 | 528 |
| Msa0561250 | MtrunA17_Chr4g0051791 | 78.233 | 317 | 34 | 3 | 111 | 427 | 1 | 282 | 7.79e-178 | 498 |
| Msa0561250 | MtrunA17_Chr8g0353201 | 43.571 | 420 | 213 | 9 | 1 | 410 | 1 | 406 | 6.55e-127 | 373 |
| Msa0561250 | MtrunA17_Chr1g0180281 | 42.130 | 432 | 220 | 8 | 1 | 418 | 5 | 420 | 3.91e-125 | 369 |
| Msa0561250 | MtrunA17_Chr1g0180271 | 42.263 | 433 | 218 | 9 | 1 | 418 | 5 | 420 | 1.42e-124 | 367 |
| Msa0561250 | MtrunA17_Chr6g0487311 | 40.930 | 430 | 228 | 9 | 1 | 412 | 1 | 422 | 2.34e-121 | 359 |
| Msa0561250 | MtrunA17_Chr6g0487401 | 40.952 | 420 | 206 | 8 | 1 | 411 | 33 | 419 | 3.92e-117 | 348 |
| Msa0561250 | MtrunA17_Chr6g0471901 | 37.530 | 421 | 193 | 8 | 1 | 412 | 1 | 360 | 8.05e-97 | 295 |
| Msa0561250 | MtrunA17_Chr2g0292641 | 70.440 | 159 | 47 | 0 | 253 | 411 | 1 | 159 | 9.72e-78 | 238 |
| Msa0561250 | MtrunA17_Chr2g0292631 | 54.595 | 185 | 73 | 4 | 1 | 181 | 1 | 178 | 1.72e-63 | 202 |
| Msa0561250 | MtrunA17_Chr1g0162771 | 40.807 | 223 | 120 | 5 | 1 | 214 | 1 | 220 | 3.86e-54 | 179 |
| Msa0561250 | MtrunA17_Chr4g0051801 | 83.333 | 96 | 15 | 1 | 1 | 95 | 1 | 96 | 2.27e-50 | 165 |
| Msa0561250 | MtrunA17_Chr1g0162761 | 61.972 | 71 | 27 | 0 | 312 | 382 | 2 | 72 | 1.98e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561250 | AT5G61820.2 | 55.353 | 439 | 166 | 8 | 10 | 425 | 10 | 441 | 1.99e-171 | 489 |
| Msa0561250 | AT5G61820.1 | 55.353 | 439 | 166 | 8 | 10 | 425 | 10 | 441 | 1.99e-171 | 489 |
Find 99 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTTCCTGCTTCATTTC+CGG | 0.123614 | 4_1:+60752677 | None:intergenic |
| ACTTAAGATACACAGTTAAA+TGG | 0.194648 | 4_1:-60753907 | Msa0561250:CDS |
| AACCCTTCTGGAATCTCTTC+AGG | 0.298573 | 4_1:+60754145 | None:intergenic |
| GGTCGCTGTTCCACGTGTTT+CGG | 0.306179 | 4_1:+60754204 | None:intergenic |
| CATTTGTCCTCAAACCCTTC+TGG | 0.306749 | 4_1:+60754133 | None:intergenic |
| CATCAACATTCAGGTGGAAT+TGG | 0.323134 | 4_1:-60753306 | Msa0561250:CDS |
| GGAATTGGATCAACTCTATA+CGG | 0.323756 | 4_1:-60753291 | Msa0561250:CDS |
| ACACAGTTAAATGGGTTGAT+TGG | 0.350890 | 4_1:-60753898 | Msa0561250:CDS |
| CTGTCCCCTAAGTTTGAACT+TGG | 0.351190 | 4_1:-60754505 | Msa0561250:CDS |
| ACCGATATTCCGGATCCTTT+CGG | 0.371967 | 4_1:-60754184 | Msa0561250:CDS |
| CTTAAGTAGAGGCTTCTCTT+TGG | 0.373052 | 4_1:+60753923 | None:intergenic |
| CAGAAGGGTTTGAGGACAAA+TGG | 0.373646 | 4_1:-60754132 | Msa0561250:CDS |
| ACAAACCATAAGGAGGAAAA+TGG | 0.374430 | 4_1:-60753396 | Msa0561250:CDS |
| GCAATACTTCTACTATTGTT+TGG | 0.376913 | 4_1:-60754586 | Msa0561250:CDS |
| ATTTCACAATACTTTGGCCT+TGG | 0.380830 | 4_1:-60754229 | Msa0561250:CDS |
| CACAGTTAAATGGGTTGATT+GGG | 0.382104 | 4_1:-60753897 | Msa0561250:CDS |
| GGTGTTGCTCATCAACATTC+AGG | 0.386508 | 4_1:-60753315 | Msa0561250:CDS |
| TGGAACAGCGACCGATATTC+CGG | 0.386546 | 4_1:-60754194 | Msa0561250:CDS |
| ATTCATTTACCTTGCAATCA+TGG | 0.389066 | 4_1:+60753786 | None:intergenic |
| CATCTACCGTAACATTATAA+AGG | 0.393321 | 4_1:+60754038 | None:intergenic |
| ATCTTCACAGAACCTGGTTT+AGG | 0.397078 | 4_1:+60752621 | None:intergenic |
| TAGGTTTCATGGAGAGGTAT+AGG | 0.398215 | 4_1:+60754382 | None:intergenic |
| TCAATTATATATATCTTAAC+AGG | 0.405782 | 4_1:+60753860 | None:intergenic |
| TGTTCTTCTATACCAAGTTA+TGG | 0.408649 | 4_1:-60752702 | Msa0561250:CDS |
| AACAAGCCAATGATGGAGAT+AGG | 0.411590 | 4_1:+60754363 | None:intergenic |
| AATGATGGAGATAGGTTTCA+TGG | 0.414097 | 4_1:+60754371 | None:intergenic |
| TCTATTAGGTCAAATTATAA+AGG | 0.420274 | 4_1:-60754004 | Msa0561250:CDS |
| AAGGGGCACACTGGAGTAAT+GGG | 0.422973 | 4_1:-60752552 | Msa0561250:CDS |
| CTTAAGATACACAGTTAAAT+GGG | 0.432170 | 4_1:-60753906 | Msa0561250:CDS |
| AATGAGGCAAACTATATTGT+AGG | 0.434805 | 4_1:-60752660 | Msa0561250:CDS |
| TCATTTCCGGTTCCATAACT+TGG | 0.439983 | 4_1:+60752690 | None:intergenic |
| AATGTTATTTCACAATACTT+TGG | 0.442468 | 4_1:-60754235 | Msa0561250:CDS |
| ACTGGTGGATATGTGATCTA+TGG | 0.444549 | 4_1:-60753336 | Msa0561250:CDS |
| ACCGAAAGGATCCGGAATAT+CGG | 0.445892 | 4_1:+60754183 | None:intergenic |
| ATGAACATGGAAGGTCTATT+AGG | 0.448357 | 4_1:-60754018 | Msa0561250:CDS |
| AGAGATTCCAGAAGGGTTTG+AGG | 0.448379 | 4_1:-60754140 | Msa0561250:CDS |
| ACATATCCACCAGTTTGAAA+TGG | 0.452253 | 4_1:+60753345 | None:intergenic |
| TCTATACCAAGTTATGGAAC+CGG | 0.454774 | 4_1:-60752696 | Msa0561250:CDS |
| CAAGGGGCACACTGGAGTAA+TGG | 0.460467 | 4_1:-60752553 | Msa0561250:CDS |
| AAACTATCAGATGATTCAAA+AGG | 0.461623 | 4_1:-60753821 | Msa0561250:CDS |
| TTAAGTGCTATATGCCCTCT+TGG | 0.461718 | 4_1:+60754442 | None:intergenic |
| CCTAAGTTTGAACTTGGACC+TGG | 0.465219 | 4_1:-60754499 | Msa0561250:CDS |
| ATCTCTATACCGAAAGGATC+CGG | 0.465291 | 4_1:+60754175 | None:intergenic |
| GATCCTTTCGGTATAGAGAT+AGG | 0.466983 | 4_1:-60754172 | Msa0561250:CDS |
| ACAAGTCTTCCATTTCAAAC+TGG | 0.476738 | 4_1:-60753354 | Msa0561250:CDS |
| GGAGTTGTTCTGCCACCAAT+AGG | 0.477987 | 4_1:+60752520 | None:intergenic |
| CCAGGTCCAAGTTCAAACTT+AGG | 0.478184 | 4_1:+60754499 | None:intergenic |
| TTCTACACGGTGCAAATTGA+AGG | 0.485851 | 4_1:-60753960 | Msa0561250:CDS |
| ATGAAACCTATCTCCATCAT+TGG | 0.488855 | 4_1:-60754369 | Msa0561250:CDS |
| GTGTGACCTTTATAATGTTA+CGG | 0.489855 | 4_1:-60754044 | Msa0561250:CDS |
| CAGGTCCAAGTTCAAACTTA+GGG | 0.493018 | 4_1:+60754500 | None:intergenic |
| TATTTATTGATAACTGATCC+AGG | 0.498818 | 4_1:+60754481 | None:intergenic |
| TCAATAATCTTCACAGAACC+TGG | 0.499902 | 4_1:+60752615 | None:intergenic |
| GTCTTTCAACAAGCCAATGA+TGG | 0.504006 | 4_1:+60754356 | None:intergenic |
| TGTCTGAAGTGTTGTTGGTA+TGG | 0.510808 | 4_1:+60752498 | None:intergenic |
| AGAAGGGTTTGAGGACAAAT+GGG | 0.513516 | 4_1:-60754131 | Msa0561250:CDS |
| ATCTTGCAGCACAAACCATA+AGG | 0.514953 | 4_1:-60753406 | Msa0561250:CDS |
| GGTTCTGTGAAGATTATTGA+TGG | 0.522395 | 4_1:-60752612 | Msa0561250:CDS |
| GTCTGAAGTGTTGTTGGTAT+GGG | 0.531190 | 4_1:+60752499 | None:intergenic |
| TTCCACGTGTTTCGGATCCA+AGG | 0.534319 | 4_1:+60754212 | None:intergenic |
| AGTCTTCCATTTCAAACTGG+TGG | 0.536429 | 4_1:-60753351 | Msa0561250:CDS |
| GAGGAACAGTGGCATATGCC+AGG | 0.537970 | 4_1:-60754260 | Msa0561250:CDS |
| TATGGAACCGGAAATGAAGC+AGG | 0.542431 | 4_1:-60752684 | Msa0561250:CDS |
| TGTTCATGCCATCGATACAC+GGG | 0.542757 | 4_1:-60754101 | Msa0561250:CDS |
| TAACTGTGTATCTTAAGTAG+AGG | 0.548989 | 4_1:+60753912 | None:intergenic |
| ATTAGGTCAAATTATAAAGG+AGG | 0.549423 | 4_1:-60754001 | Msa0561250:CDS |
| TAGAATGTCTGAAGTGTTGT+TGG | 0.550349 | 4_1:+60752493 | None:intergenic |
| TCTAACTACAACAGCAGCAA+GGG | 0.551112 | 4_1:-60752570 | Msa0561250:CDS |
| ATGTTCATGCCATCGATACA+CGG | 0.551421 | 4_1:-60754102 | Msa0561250:CDS |
| ATTGTGAAATAACATTCTCC+TGG | 0.553065 | 4_1:+60754242 | None:intergenic |
| CGGAAATGAAGCAGGAAATG+AGG | 0.554317 | 4_1:-60752676 | Msa0561250:CDS |
| AACAGCAGCAAGGGGCACAC+TGG | 0.559463 | 4_1:-60752561 | Msa0561250:CDS |
| TGGATCAACTCTATACGGGC+AGG | 0.560753 | 4_1:-60753286 | Msa0561250:intron |
| GTCTAACTACAACAGCAGCA+AGG | 0.581714 | 4_1:-60752571 | Msa0561250:CDS |
| TGGAGATAGGTTTCATGGAG+AGG | 0.587595 | 4_1:+60754376 | None:intergenic |
| GAATTGGATCAACTCTATAC+GGG | 0.589113 | 4_1:-60753290 | Msa0561250:CDS |
| ACACGGTGCAAATTGAAGGA+AGG | 0.589198 | 4_1:-60753956 | Msa0561250:CDS |
| GAACTCAGACCATGATTGCA+AGG | 0.595058 | 4_1:-60753795 | Msa0561250:intron |
| GGCCTTGGATCCGAAACACG+TGG | 0.606081 | 4_1:-60754214 | Msa0561250:CDS |
| GCTGAAGTAGTTGATGAAGA+TGG | 0.618761 | 4_1:-60754409 | Msa0561250:CDS |
| ATGGTTGTGTTCATGTGAAG+AGG | 0.619686 | 4_1:-60753377 | Msa0561250:CDS |
| ACTCTGATCATGTTCTTGTG+AGG | 0.633094 | 4_1:-60754279 | Msa0561250:CDS |
| TCCACATGTTATCCTAAACC+AGG | 0.633112 | 4_1:-60752633 | Msa0561250:CDS |
| AATCCTGAAGAGATTCCAGA+AGG | 0.639599 | 4_1:-60754148 | Msa0561250:CDS |
| TTACCTATCTCTATACCGAA+AGG | 0.640325 | 4_1:+60754169 | None:intergenic |
| ACCTGGTTTAGGATAACATG+TGG | 0.643141 | 4_1:+60752632 | None:intergenic |
| AATGTTACGGTAGATGAACA+TGG | 0.647349 | 4_1:-60754031 | Msa0561250:CDS |
| CATGTTCTTGTGAGGAACAG+TGG | 0.650998 | 4_1:-60754271 | Msa0561250:CDS |
| GTTGCTCATCAACATTCAGG+TGG | 0.654778 | 4_1:-60753312 | Msa0561250:CDS |
| ATCCTGAAGAGATTCCAGAA+GGG | 0.660203 | 4_1:-60754147 | Msa0561250:CDS |
| TTACGGTAGATGAACATGGA+AGG | 0.664360 | 4_1:-60754027 | Msa0561250:CDS |
| GTAGTTAACATCTGTGTGTG+TGG | 0.668250 | 4_1:+60754315 | None:intergenic |
| TTGCAGCACAAACCATAAGG+AGG | 0.679495 | 4_1:-60753403 | Msa0561250:CDS |
| CTAACTACAACAGCAGCAAG+GGG | 0.685180 | 4_1:-60752569 | Msa0561250:CDS |
| TATGTTGTTATGATTCTACA+CGG | 0.698305 | 4_1:-60753973 | Msa0561250:CDS |
| GTTCATGCCATCGATACACG+GGG | 0.700269 | 4_1:-60754100 | Msa0561250:CDS |
| AGGTCCAAGTTCAAACTTAG+GGG | 0.710834 | 4_1:+60754501 | None:intergenic |
| TCATGCCATCGATACACGGG+GGG | 0.721292 | 4_1:-60754098 | Msa0561250:CDS |
| TTCATGCCATCGATACACGG+GGG | 0.740248 | 4_1:-60754099 | Msa0561250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTATTTTAAAATCA+AGG | - | chr4_1:60753421-60753440 | Msa0561250:CDS | 10.0% |
| !!! | TTTTGATTATTTTAAAATCA+AGG | - | chr4_1:60753421-60753440 | Msa0561250:CDS | 10.0% |
| !! | TCAATTATATATATCTTAAC+AGG | + | chr4_1:60753208-60753227 | None:intergenic | 15.0% |
| !! | TCAATTATATATATCTTAAC+AGG | + | chr4_1:60753208-60753227 | None:intergenic | 15.0% |
| !!! | TAGAGATTTTGTATTTTTAG+TGG | - | chr4_1:60752457-60752476 | Msa0561250:CDS | 20.0% |
| !!! | AATGTTATTTCACAATACTT+TGG | - | chr4_1:60752830-60752849 | Msa0561250:intron | 20.0% |
| !! | TCTATTAGGTCAAATTATAA+AGG | - | chr4_1:60753061-60753080 | Msa0561250:intron | 20.0% |
| !! | TTCAAAAAAGAAATCATTGA+AGG | - | chr4_1:60753894-60753913 | Msa0561250:CDS | 20.0% |
| !! | TTCAAAAAAGAAATCATTGA+AGG | - | chr4_1:60753894-60753913 | Msa0561250:CDS | 20.0% |
| !!! | TGCTTTTATTAACAACAAAA+AGG | - | chr4_1:60754242-60754261 | Msa0561250:CDS | 20.0% |
| !! | CTTGATTAAGAAGTTAAATA+TGG | - | chr4_1:60754275-60754294 | Msa0561250:CDS | 20.0% |
| !! | TATCCATAAAAAAAGAAGAA+CGG | + | chr4_1:60754599-60754618 | None:intergenic | 20.0% |
| !!! | TAGAGATTTTGTATTTTTAG+TGG | - | chr4_1:60752457-60752476 | Msa0561250:CDS | 20.0% |
| !!! | AATGTTATTTCACAATACTT+TGG | - | chr4_1:60752830-60752849 | Msa0561250:intron | 20.0% |
| !! | TCTATTAGGTCAAATTATAA+AGG | - | chr4_1:60753061-60753080 | Msa0561250:intron | 20.0% |
| !! | TTCAAAAAAGAAATCATTGA+AGG | - | chr4_1:60753894-60753913 | Msa0561250:CDS | 20.0% |
| !! | TTCAAAAAAGAAATCATTGA+AGG | - | chr4_1:60753894-60753913 | Msa0561250:CDS | 20.0% |
| !!! | TGCTTTTATTAACAACAAAA+AGG | - | chr4_1:60754242-60754261 | Msa0561250:CDS | 20.0% |
| !! | CTTGATTAAGAAGTTAAATA+TGG | - | chr4_1:60754275-60754294 | Msa0561250:CDS | 20.0% |
| !! | TATCCATAAAAAAAGAAGAA+CGG | + | chr4_1:60754599-60754618 | None:intergenic | 20.0% |
| !!! | AGCTGATTTTACTTTATCTT+CGG | + | chr4_1:60752534-60752553 | None:intergenic | 25.0% |
| !! | TATTTATTGATAACTGATCC+AGG | + | chr4_1:60752587-60752606 | None:intergenic | 25.0% |
| !!! | TATGATATTGATTTTCCAAG+AGG | - | chr4_1:60752608-60752627 | Msa0561250:CDS | 25.0% |
| !!! | ATGATATTGATTTTCCAAGA+GGG | - | chr4_1:60752609-60752628 | Msa0561250:CDS | 25.0% |
| ! | ATTAGGTCAAATTATAAAGG+AGG | - | chr4_1:60753064-60753083 | Msa0561250:intron | 25.0% |
| ! | TATGTTGTTATGATTCTACA+CGG | - | chr4_1:60753092-60753111 | Msa0561250:intron | 25.0% |
| ! | ACTTAAGATACACAGTTAAA+TGG | - | chr4_1:60753158-60753177 | Msa0561250:intron | 25.0% |
| ! | CTTAAGATACACAGTTAAAT+GGG | - | chr4_1:60753159-60753178 | Msa0561250:intron | 25.0% |
| ! | AAACTATCAGATGATTCAAA+AGG | - | chr4_1:60753244-60753263 | Msa0561250:intron | 25.0% |
| ! | AGAAATAGATTTCGTATAGT+TGG | - | chr4_1:60753324-60753343 | Msa0561250:CDS | 25.0% |
| ! | GAAATAGATTTCGTATAGTT+GGG | - | chr4_1:60753325-60753344 | Msa0561250:CDS | 25.0% |
| !!! | TATTTTAAAATCAAGGACAC+CGG | - | chr4_1:60753428-60753447 | Msa0561250:intron | 25.0% |
| ! | GTTGACAAAAACTACAAATA+AGG | + | chr4_1:60753543-60753562 | None:intergenic | 25.0% |
| !! | TGGACTATTGTTATGTTTTA+GGG | + | chr4_1:60753575-60753594 | None:intergenic | 25.0% |
| !!! | ATGGACTATTGTTATGTTTT+AGG | + | chr4_1:60753576-60753595 | None:intergenic | 25.0% |
| !!! | AACATGGATTTTTTTGTTTC+AGG | - | chr4_1:60753620-60753639 | Msa0561250:intron | 25.0% |
| ! | ATTTAATCACAAATGTGTGT+CGG | + | chr4_1:60754172-60754191 | None:intergenic | 25.0% |
| ! | ATCCATAAAAAAAGAAGAAC+GGG | + | chr4_1:60754598-60754617 | None:intergenic | 25.0% |
| !!! | AGCTGATTTTACTTTATCTT+CGG | + | chr4_1:60752534-60752553 | None:intergenic | 25.0% |
| !! | TATTTATTGATAACTGATCC+AGG | + | chr4_1:60752587-60752606 | None:intergenic | 25.0% |
| !!! | TATGATATTGATTTTCCAAG+AGG | - | chr4_1:60752608-60752627 | Msa0561250:CDS | 25.0% |
| !!! | ATGATATTGATTTTCCAAGA+GGG | - | chr4_1:60752609-60752628 | Msa0561250:CDS | 25.0% |
| ! | ATTAGGTCAAATTATAAAGG+AGG | - | chr4_1:60753064-60753083 | Msa0561250:intron | 25.0% |
| ! | TATGTTGTTATGATTCTACA+CGG | - | chr4_1:60753092-60753111 | Msa0561250:intron | 25.0% |
| ! | ACTTAAGATACACAGTTAAA+TGG | - | chr4_1:60753158-60753177 | Msa0561250:intron | 25.0% |
| ! | CTTAAGATACACAGTTAAAT+GGG | - | chr4_1:60753159-60753178 | Msa0561250:intron | 25.0% |
| ! | AAACTATCAGATGATTCAAA+AGG | - | chr4_1:60753244-60753263 | Msa0561250:intron | 25.0% |
| ! | AGAAATAGATTTCGTATAGT+TGG | - | chr4_1:60753324-60753343 | Msa0561250:CDS | 25.0% |
| ! | GAAATAGATTTCGTATAGTT+GGG | - | chr4_1:60753325-60753344 | Msa0561250:CDS | 25.0% |
| !!! | TATTTTAAAATCAAGGACAC+CGG | - | chr4_1:60753428-60753447 | Msa0561250:intron | 25.0% |
| ! | GTTGACAAAAACTACAAATA+AGG | + | chr4_1:60753543-60753562 | None:intergenic | 25.0% |
| !! | TGGACTATTGTTATGTTTTA+GGG | + | chr4_1:60753575-60753594 | None:intergenic | 25.0% |
| !!! | ATGGACTATTGTTATGTTTT+AGG | + | chr4_1:60753576-60753595 | None:intergenic | 25.0% |
| !!! | AACATGGATTTTTTTGTTTC+AGG | - | chr4_1:60753620-60753639 | Msa0561250:intron | 25.0% |
| ! | ATTTAATCACAAATGTGTGT+CGG | + | chr4_1:60754172-60754191 | None:intergenic | 25.0% |
| ! | ATCCATAAAAAAAGAAGAAC+GGG | + | chr4_1:60754598-60754617 | None:intergenic | 25.0% |
| GCAATACTTCTACTATTGTT+TGG | - | chr4_1:60752479-60752498 | Msa0561250:CDS | 30.0% | |
| ATTGTGAAATAACATTCTCC+TGG | + | chr4_1:60752826-60752845 | None:intergenic | 30.0% | |
| GTGTGACCTTTATAATGTTA+CGG | - | chr4_1:60753021-60753040 | Msa0561250:intron | 30.0% | |
| CATCTACCGTAACATTATAA+AGG | + | chr4_1:60753030-60753049 | None:intergenic | 30.0% | |
| !! | AAATTGAAGGAAGGTTTTGA+GGG | - | chr4_1:60753118-60753137 | Msa0561250:intron | 30.0% |
| TAACTGTGTATCTTAAGTAG+AGG | + | chr4_1:60753156-60753175 | None:intergenic | 30.0% | |
| ATTCATTTACCTTGCAATCA+TGG | + | chr4_1:60753282-60753301 | None:intergenic | 30.0% | |
| !!! | ATTTTAAAATCAAGGACACC+GGG | - | chr4_1:60753429-60753448 | Msa0561250:intron | 30.0% |
| ATAAGCACATTAATGACTGT+TGG | + | chr4_1:60753486-60753505 | None:intergenic | 30.0% | |
| TAAATTGAGAGTCTCTCTTA+AGG | + | chr4_1:60753945-60753964 | None:intergenic | 30.0% | |
| !! | AATTAGATGTCACTTTCTAG+TGG | - | chr4_1:60754001-60754020 | Msa0561250:CDS | 30.0% |
| TAAATTGAGAGTCTCTCTTA+AGG | + | chr4_1:60753945-60753964 | None:intergenic | 30.0% | |
| ! | CATGTGATAGTTTTCAATTG+AGG | - | chr4_1:60754211-60754230 | Msa0561250:CDS | 30.0% |
| !! | AGCTTGTTTTCTGATATATG+TGG | - | chr4_1:60754312-60754331 | Msa0561250:CDS | 30.0% |
| ! | TATATGTGGATCATGTTTTC+AGG | - | chr4_1:60754326-60754345 | Msa0561250:CDS | 30.0% |
| TGTTCTTCTATACCAAGTTA+TGG | - | chr4_1:60754363-60754382 | Msa0561250:CDS | 30.0% | |
| AATGAGGCAAACTATATTGT+AGG | - | chr4_1:60754405-60754424 | Msa0561250:CDS | 30.0% | |
| !!! | TACCCGTTCTTCTTTTTTTA+TGG | - | chr4_1:60754593-60754612 | Msa0561250:CDS | 30.0% |
| GCAATACTTCTACTATTGTT+TGG | - | chr4_1:60752479-60752498 | Msa0561250:CDS | 30.0% | |
| ATTGTGAAATAACATTCTCC+TGG | + | chr4_1:60752826-60752845 | None:intergenic | 30.0% | |
| GTGTGACCTTTATAATGTTA+CGG | - | chr4_1:60753021-60753040 | Msa0561250:intron | 30.0% | |
| CATCTACCGTAACATTATAA+AGG | + | chr4_1:60753030-60753049 | None:intergenic | 30.0% | |
| !! | AAATTGAAGGAAGGTTTTGA+GGG | - | chr4_1:60753118-60753137 | Msa0561250:intron | 30.0% |
| TAACTGTGTATCTTAAGTAG+AGG | + | chr4_1:60753156-60753175 | None:intergenic | 30.0% | |
| ATTCATTTACCTTGCAATCA+TGG | + | chr4_1:60753282-60753301 | None:intergenic | 30.0% | |
| !!! | ATTTTAAAATCAAGGACACC+GGG | - | chr4_1:60753429-60753448 | Msa0561250:intron | 30.0% |
| ATAAGCACATTAATGACTGT+TGG | + | chr4_1:60753486-60753505 | None:intergenic | 30.0% | |
| TAAATTGAGAGTCTCTCTTA+AGG | + | chr4_1:60753945-60753964 | None:intergenic | 30.0% | |
| !! | AATTAGATGTCACTTTCTAG+TGG | - | chr4_1:60754001-60754020 | Msa0561250:CDS | 30.0% |
| TAAATTGAGAGTCTCTCTTA+AGG | + | chr4_1:60753945-60753964 | None:intergenic | 30.0% | |
| ! | CATGTGATAGTTTTCAATTG+AGG | - | chr4_1:60754211-60754230 | Msa0561250:CDS | 30.0% |
| !! | AGCTTGTTTTCTGATATATG+TGG | - | chr4_1:60754312-60754331 | Msa0561250:CDS | 30.0% |
| ! | TATATGTGGATCATGTTTTC+AGG | - | chr4_1:60754326-60754345 | Msa0561250:CDS | 30.0% |
| TGTTCTTCTATACCAAGTTA+TGG | - | chr4_1:60754363-60754382 | Msa0561250:CDS | 30.0% | |
| AATGAGGCAAACTATATTGT+AGG | - | chr4_1:60754405-60754424 | Msa0561250:CDS | 30.0% | |
| !!! | TACCCGTTCTTCTTTTTTTA+TGG | - | chr4_1:60754593-60754612 | Msa0561250:CDS | 30.0% |
| ! | ATGCTCAAGTTCTTTTGTGA+AGG | - | chr4_1:60752508-60752527 | Msa0561250:CDS | 35.0% |
| ! | AATGATGGAGATAGGTTTCA+TGG | + | chr4_1:60752697-60752716 | None:intergenic | 35.0% |
| ATGAAACCTATCTCCATCAT+TGG | - | chr4_1:60752696-60752715 | Msa0561250:CDS | 35.0% | |
| ATTTCACAATACTTTGGCCT+TGG | - | chr4_1:60752836-60752855 | Msa0561250:intron | 35.0% | |
| TTACCTATCTCTATACCGAA+AGG | + | chr4_1:60752899-60752918 | None:intergenic | 35.0% | |
| AATGTTACGGTAGATGAACA+TGG | - | chr4_1:60753034-60753053 | Msa0561250:intron | 35.0% | |
| ATGAACATGGAAGGTCTATT+AGG | - | chr4_1:60753047-60753066 | Msa0561250:intron | 35.0% | |
| ! | CAAATTGAAGGAAGGTTTTG+AGG | - | chr4_1:60753117-60753136 | Msa0561250:intron | 35.0% |
| !! | ACACAGTTAAATGGGTTGAT+TGG | - | chr4_1:60753167-60753186 | Msa0561250:intron | 35.0% |
| !! | CACAGTTAAATGGGTTGATT+GGG | - | chr4_1:60753168-60753187 | Msa0561250:intron | 35.0% |
| GACAAATCATCTGTGAATGA+CGG | - | chr4_1:60753366-60753385 | Msa0561250:CDS | 35.0% | |
| ATCAAGATCAAACAGTGTCT+TGG | + | chr4_1:60753463-60753482 | None:intergenic | 35.0% | |
| ACAATAGTCCATTACTTTGC+CGG | - | chr4_1:60753584-60753603 | Msa0561250:intron | 35.0% | |
| ACAAACCATAAGGAGGAAAA+TGG | - | chr4_1:60753669-60753688 | Msa0561250:intron | 35.0% | |
| ACAAGTCTTCCATTTCAAAC+TGG | - | chr4_1:60753711-60753730 | Msa0561250:intron | 35.0% | |
| ACATATCCACCAGTTTGAAA+TGG | + | chr4_1:60753723-60753742 | None:intergenic | 35.0% | |
| GGAATTGGATCAACTCTATA+CGG | - | chr4_1:60753774-60753793 | Msa0561250:intron | 35.0% | |
| GAATTGGATCAACTCTATAC+GGG | - | chr4_1:60753775-60753794 | Msa0561250:intron | 35.0% | |
| !! | GATTAGATGTCACTTTCTAG+TGG | - | chr4_1:60753861-60753880 | Msa0561250:CDS | 35.0% |
| TAAGGAGCAGAGAATCATTA+TGG | + | chr4_1:60753927-60753946 | None:intergenic | 35.0% | |
| CATGTATAGCACTAACACTT+AGG | - | chr4_1:60753968-60753987 | Msa0561250:CDS | 35.0% | |
| TAAGGAGCAGAGAATCATTA+TGG | + | chr4_1:60753927-60753946 | None:intergenic | 35.0% | |
| CATGTATAGCACTAACACTT+AGG | - | chr4_1:60753968-60753987 | Msa0561250:CDS | 35.0% | |
| TCTATACCAAGTTATGGAAC+CGG | - | chr4_1:60754369-60754388 | Msa0561250:CDS | 35.0% | |
| TCAATAATCTTCACAGAACC+TGG | + | chr4_1:60754453-60754472 | None:intergenic | 35.0% | |
| GGTTCTGTGAAGATTATTGA+TGG | - | chr4_1:60754453-60754472 | Msa0561250:CDS | 35.0% | |
| ! | AATGGGACTTTTCTACCTAT+TGG | - | chr4_1:60754530-60754549 | Msa0561250:CDS | 35.0% |
| !! | TAGAATGTCTGAAGTGTTGT+TGG | + | chr4_1:60754575-60754594 | None:intergenic | 35.0% |
| ! | ATGCTCAAGTTCTTTTGTGA+AGG | - | chr4_1:60752508-60752527 | Msa0561250:CDS | 35.0% |
| ! | AATGATGGAGATAGGTTTCA+TGG | + | chr4_1:60752697-60752716 | None:intergenic | 35.0% |
| ATGAAACCTATCTCCATCAT+TGG | - | chr4_1:60752696-60752715 | Msa0561250:CDS | 35.0% | |
| ATTTCACAATACTTTGGCCT+TGG | - | chr4_1:60752836-60752855 | Msa0561250:intron | 35.0% | |
| TTACCTATCTCTATACCGAA+AGG | + | chr4_1:60752899-60752918 | None:intergenic | 35.0% | |
| AATGTTACGGTAGATGAACA+TGG | - | chr4_1:60753034-60753053 | Msa0561250:intron | 35.0% | |
| ATGAACATGGAAGGTCTATT+AGG | - | chr4_1:60753047-60753066 | Msa0561250:intron | 35.0% | |
| ! | CAAATTGAAGGAAGGTTTTG+AGG | - | chr4_1:60753117-60753136 | Msa0561250:intron | 35.0% |
| !! | ACACAGTTAAATGGGTTGAT+TGG | - | chr4_1:60753167-60753186 | Msa0561250:intron | 35.0% |
| !! | CACAGTTAAATGGGTTGATT+GGG | - | chr4_1:60753168-60753187 | Msa0561250:intron | 35.0% |
| GACAAATCATCTGTGAATGA+CGG | - | chr4_1:60753366-60753385 | Msa0561250:CDS | 35.0% | |
| ATCAAGATCAAACAGTGTCT+TGG | + | chr4_1:60753463-60753482 | None:intergenic | 35.0% | |
| ACAATAGTCCATTACTTTGC+CGG | - | chr4_1:60753584-60753603 | Msa0561250:intron | 35.0% | |
| ACAAACCATAAGGAGGAAAA+TGG | - | chr4_1:60753669-60753688 | Msa0561250:intron | 35.0% | |
| ACAAGTCTTCCATTTCAAAC+TGG | - | chr4_1:60753711-60753730 | Msa0561250:intron | 35.0% | |
| ACATATCCACCAGTTTGAAA+TGG | + | chr4_1:60753723-60753742 | None:intergenic | 35.0% | |
| GGAATTGGATCAACTCTATA+CGG | - | chr4_1:60753774-60753793 | Msa0561250:intron | 35.0% | |
| GAATTGGATCAACTCTATAC+GGG | - | chr4_1:60753775-60753794 | Msa0561250:intron | 35.0% | |
| !! | GATTAGATGTCACTTTCTAG+TGG | - | chr4_1:60753861-60753880 | Msa0561250:CDS | 35.0% |
| TAAGGAGCAGAGAATCATTA+TGG | + | chr4_1:60753927-60753946 | None:intergenic | 35.0% | |
| CATGTATAGCACTAACACTT+AGG | - | chr4_1:60753968-60753987 | Msa0561250:CDS | 35.0% | |
| TAAGGAGCAGAGAATCATTA+TGG | + | chr4_1:60753927-60753946 | None:intergenic | 35.0% | |
| CATGTATAGCACTAACACTT+AGG | - | chr4_1:60753968-60753987 | Msa0561250:CDS | 35.0% | |
| TCTATACCAAGTTATGGAAC+CGG | - | chr4_1:60754369-60754388 | Msa0561250:CDS | 35.0% | |
| TCAATAATCTTCACAGAACC+TGG | + | chr4_1:60754453-60754472 | None:intergenic | 35.0% | |
| GGTTCTGTGAAGATTATTGA+TGG | - | chr4_1:60754453-60754472 | Msa0561250:CDS | 35.0% | |
| ! | AATGGGACTTTTCTACCTAT+TGG | - | chr4_1:60754530-60754549 | Msa0561250:CDS | 35.0% |
| !! | TAGAATGTCTGAAGTGTTGT+TGG | + | chr4_1:60754575-60754594 | None:intergenic | 35.0% |
| AGGTCCAAGTTCAAACTTAG+GGG | + | chr4_1:60752567-60752586 | None:intergenic | 40.0% | |
| CAGGTCCAAGTTCAAACTTA+GGG | + | chr4_1:60752568-60752587 | None:intergenic | 40.0% | |
| TTAAGTGCTATATGCCCTCT+TGG | + | chr4_1:60752626-60752645 | None:intergenic | 40.0% | |
| !! | GCTGAAGTAGTTGATGAAGA+TGG | - | chr4_1:60752656-60752675 | Msa0561250:CDS | 40.0% |
| ! | TAGGTTTCATGGAGAGGTAT+AGG | + | chr4_1:60752686-60752705 | None:intergenic | 40.0% |
| ! | AACAAGCCAATGATGGAGAT+AGG | + | chr4_1:60752705-60752724 | None:intergenic | 40.0% |
| GTCTTTCAACAAGCCAATGA+TGG | + | chr4_1:60752712-60752731 | None:intergenic | 40.0% | |
| GTAGTTAACATCTGTGTGTG+TGG | + | chr4_1:60752753-60752772 | None:intergenic | 40.0% | |
| ACTCTGATCATGTTCTTGTG+AGG | - | chr4_1:60752786-60752805 | Msa0561250:intron | 40.0% | |
| ATCTCTATACCGAAAGGATC+CGG | + | chr4_1:60752893-60752912 | None:intergenic | 40.0% | |
| GATCCTTTCGGTATAGAGAT+AGG | - | chr4_1:60752893-60752912 | Msa0561250:intron | 40.0% | |
| AATCCTGAAGAGATTCCAGA+AGG | - | chr4_1:60752917-60752936 | Msa0561250:intron | 40.0% | |
| ATCCTGAAGAGATTCCAGAA+GGG | - | chr4_1:60752918-60752937 | Msa0561250:intron | 40.0% | |
| AGAAGGGTTTGAGGACAAAT+GGG | - | chr4_1:60752934-60752953 | Msa0561250:intron | 40.0% | |
| ATGTTCATGCCATCGATACA+CGG | - | chr4_1:60752963-60752982 | Msa0561250:intron | 40.0% | |
| TTACGGTAGATGAACATGGA+AGG | - | chr4_1:60753038-60753057 | Msa0561250:intron | 40.0% | |
| TTCTACACGGTGCAAATTGA+AGG | - | chr4_1:60753105-60753124 | Msa0561250:intron | 40.0% | |
| CTTAAGTAGAGGCTTCTCTT+TGG | + | chr4_1:60753145-60753164 | None:intergenic | 40.0% | |
| GATTTGTCTGCGTGAATCTA+GGG | + | chr4_1:60753354-60753373 | None:intergenic | 40.0% | |
| ! | TGATTTGTCTGCGTGAATCT+AGG | + | chr4_1:60753355-60753374 | None:intergenic | 40.0% |
| CAATAGTCCATTACTTTGCC+GGG | - | chr4_1:60753585-60753604 | Msa0561250:intron | 40.0% | |
| ATCTTGCAGCACAAACCATA+AGG | - | chr4_1:60753659-60753678 | Msa0561250:intron | 40.0% | |
| ! | CACAACCATTTTCCTCCTTA+TGG | + | chr4_1:60753677-60753696 | None:intergenic | 40.0% |
| ATGGTTGTGTTCATGTGAAG+AGG | - | chr4_1:60753688-60753707 | Msa0561250:intron | 40.0% | |
| AGTCTTCCATTTCAAACTGG+TGG | - | chr4_1:60753714-60753733 | Msa0561250:intron | 40.0% | |
| ! | ACTGGTGGATATGTGATCTA+TGG | - | chr4_1:60753729-60753748 | Msa0561250:intron | 40.0% |
| CATCAACATTCAGGTGGAAT+TGG | - | chr4_1:60753759-60753778 | Msa0561250:intron | 40.0% | |
| TAAAGATGTGTTCGAGTGTC+TGG | - | chr4_1:60754133-60754152 | Msa0561250:CDS | 40.0% | |
| !! | TGTGGATCATGTTTTCAGGA+TGG | - | chr4_1:60754330-60754349 | Msa0561250:CDS | 40.0% |
| TCATTTCCGGTTCCATAACT+TGG | + | chr4_1:60754378-60754397 | None:intergenic | 40.0% | |
| CTCATTTCCTGCTTCATTTC+CGG | + | chr4_1:60754391-60754410 | None:intergenic | 40.0% | |
| TCCACATGTTATCCTAAACC+AGG | - | chr4_1:60754432-60754451 | Msa0561250:CDS | 40.0% | |
| ! | ACCTGGTTTAGGATAACATG+TGG | + | chr4_1:60754436-60754455 | None:intergenic | 40.0% |
| ATCTTCACAGAACCTGGTTT+AGG | + | chr4_1:60754447-60754466 | None:intergenic | 40.0% | |
| TCTAACTACAACAGCAGCAA+GGG | - | chr4_1:60754495-60754514 | Msa0561250:CDS | 40.0% | |
| !! | GTCTGAAGTGTTGTTGGTAT+GGG | + | chr4_1:60754569-60754588 | None:intergenic | 40.0% |
| !! | TGTCTGAAGTGTTGTTGGTA+TGG | + | chr4_1:60754570-60754589 | None:intergenic | 40.0% |
| AGGTCCAAGTTCAAACTTAG+GGG | + | chr4_1:60752567-60752586 | None:intergenic | 40.0% | |
| CAGGTCCAAGTTCAAACTTA+GGG | + | chr4_1:60752568-60752587 | None:intergenic | 40.0% | |
| TTAAGTGCTATATGCCCTCT+TGG | + | chr4_1:60752626-60752645 | None:intergenic | 40.0% | |
| !! | GCTGAAGTAGTTGATGAAGA+TGG | - | chr4_1:60752656-60752675 | Msa0561250:CDS | 40.0% |
| ! | TAGGTTTCATGGAGAGGTAT+AGG | + | chr4_1:60752686-60752705 | None:intergenic | 40.0% |
| ! | AACAAGCCAATGATGGAGAT+AGG | + | chr4_1:60752705-60752724 | None:intergenic | 40.0% |
| GTCTTTCAACAAGCCAATGA+TGG | + | chr4_1:60752712-60752731 | None:intergenic | 40.0% | |
| GTAGTTAACATCTGTGTGTG+TGG | + | chr4_1:60752753-60752772 | None:intergenic | 40.0% | |
| ACTCTGATCATGTTCTTGTG+AGG | - | chr4_1:60752786-60752805 | Msa0561250:intron | 40.0% | |
| ATCTCTATACCGAAAGGATC+CGG | + | chr4_1:60752893-60752912 | None:intergenic | 40.0% | |
| GATCCTTTCGGTATAGAGAT+AGG | - | chr4_1:60752893-60752912 | Msa0561250:intron | 40.0% | |
| AATCCTGAAGAGATTCCAGA+AGG | - | chr4_1:60752917-60752936 | Msa0561250:intron | 40.0% | |
| ATCCTGAAGAGATTCCAGAA+GGG | - | chr4_1:60752918-60752937 | Msa0561250:intron | 40.0% | |
| AGAAGGGTTTGAGGACAAAT+GGG | - | chr4_1:60752934-60752953 | Msa0561250:intron | 40.0% | |
| ATGTTCATGCCATCGATACA+CGG | - | chr4_1:60752963-60752982 | Msa0561250:intron | 40.0% | |
| TTACGGTAGATGAACATGGA+AGG | - | chr4_1:60753038-60753057 | Msa0561250:intron | 40.0% | |
| TTCTACACGGTGCAAATTGA+AGG | - | chr4_1:60753105-60753124 | Msa0561250:intron | 40.0% | |
| CTTAAGTAGAGGCTTCTCTT+TGG | + | chr4_1:60753145-60753164 | None:intergenic | 40.0% | |
| GATTTGTCTGCGTGAATCTA+GGG | + | chr4_1:60753354-60753373 | None:intergenic | 40.0% | |
| ! | TGATTTGTCTGCGTGAATCT+AGG | + | chr4_1:60753355-60753374 | None:intergenic | 40.0% |
| CAATAGTCCATTACTTTGCC+GGG | - | chr4_1:60753585-60753604 | Msa0561250:intron | 40.0% | |
| ATCTTGCAGCACAAACCATA+AGG | - | chr4_1:60753659-60753678 | Msa0561250:intron | 40.0% | |
| ! | CACAACCATTTTCCTCCTTA+TGG | + | chr4_1:60753677-60753696 | None:intergenic | 40.0% |
| ATGGTTGTGTTCATGTGAAG+AGG | - | chr4_1:60753688-60753707 | Msa0561250:intron | 40.0% | |
| AGTCTTCCATTTCAAACTGG+TGG | - | chr4_1:60753714-60753733 | Msa0561250:intron | 40.0% | |
| ! | ACTGGTGGATATGTGATCTA+TGG | - | chr4_1:60753729-60753748 | Msa0561250:intron | 40.0% |
| CATCAACATTCAGGTGGAAT+TGG | - | chr4_1:60753759-60753778 | Msa0561250:intron | 40.0% | |
| TAAAGATGTGTTCGAGTGTC+TGG | - | chr4_1:60754133-60754152 | Msa0561250:CDS | 40.0% | |
| !! | TGTGGATCATGTTTTCAGGA+TGG | - | chr4_1:60754330-60754349 | Msa0561250:CDS | 40.0% |
| TCATTTCCGGTTCCATAACT+TGG | + | chr4_1:60754378-60754397 | None:intergenic | 40.0% | |
| CTCATTTCCTGCTTCATTTC+CGG | + | chr4_1:60754391-60754410 | None:intergenic | 40.0% | |
| TCCACATGTTATCCTAAACC+AGG | - | chr4_1:60754432-60754451 | Msa0561250:CDS | 40.0% | |
| ! | ACCTGGTTTAGGATAACATG+TGG | + | chr4_1:60754436-60754455 | None:intergenic | 40.0% |
| ATCTTCACAGAACCTGGTTT+AGG | + | chr4_1:60754447-60754466 | None:intergenic | 40.0% | |
| TCTAACTACAACAGCAGCAA+GGG | - | chr4_1:60754495-60754514 | Msa0561250:CDS | 40.0% | |
| !! | GTCTGAAGTGTTGTTGGTAT+GGG | + | chr4_1:60754569-60754588 | None:intergenic | 40.0% |
| !! | TGTCTGAAGTGTTGTTGGTA+TGG | + | chr4_1:60754570-60754589 | None:intergenic | 40.0% |
| CTGTCCCCTAAGTTTGAACT+TGG | - | chr4_1:60752560-60752579 | Msa0561250:CDS | 45.0% | |
| CCAGGTCCAAGTTCAAACTT+AGG | + | chr4_1:60752569-60752588 | None:intergenic | 45.0% | |
| CCTAAGTTTGAACTTGGACC+TGG | - | chr4_1:60752566-60752585 | Msa0561250:CDS | 45.0% | |
| TGGAGATAGGTTTCATGGAG+AGG | + | chr4_1:60752692-60752711 | None:intergenic | 45.0% | |
| CATGTTCTTGTGAGGAACAG+TGG | - | chr4_1:60752794-60752813 | Msa0561250:intron | 45.0% | |
| ACCGATATTCCGGATCCTTT+CGG | - | chr4_1:60752881-60752900 | Msa0561250:intron | 45.0% | |
| ACCGAAAGGATCCGGAATAT+CGG | + | chr4_1:60752885-60752904 | None:intergenic | 45.0% | |
| !! | AACCCTTCTGGAATCTCTTC+AGG | + | chr4_1:60752923-60752942 | None:intergenic | 45.0% |
| AGAGATTCCAGAAGGGTTTG+AGG | - | chr4_1:60752925-60752944 | Msa0561250:intron | 45.0% | |
| CATTTGTCCTCAAACCCTTC+TGG | + | chr4_1:60752935-60752954 | None:intergenic | 45.0% | |
| CAGAAGGGTTTGAGGACAAA+TGG | - | chr4_1:60752933-60752952 | Msa0561250:intron | 45.0% | |
| TGTTCATGCCATCGATACAC+GGG | - | chr4_1:60752964-60752983 | Msa0561250:intron | 45.0% | |
| ACACGGTGCAAATTGAAGGA+AGG | - | chr4_1:60753109-60753128 | Msa0561250:intron | 45.0% | |
| GAACTCAGACCATGATTGCA+AGG | - | chr4_1:60753270-60753289 | Msa0561250:intron | 45.0% | |
| AAAATCAAGGACACCGGGTT+TGG | - | chr4_1:60753434-60753453 | Msa0561250:intron | 45.0% | |
| AGTGTCTTGGATTCCAAACC+CGG | + | chr4_1:60753450-60753469 | None:intergenic | 45.0% | |
| CCATATACCCGGCAAAGTAA+TGG | + | chr4_1:60753595-60753614 | None:intergenic | 45.0% | |
| CCATTACTTTGCCGGGTATA+TGG | - | chr4_1:60753592-60753611 | Msa0561250:intron | 45.0% | |
| CATGTTGCTCACCATATACC+CGG | + | chr4_1:60753606-60753625 | None:intergenic | 45.0% | |
| TTGCAGCACAAACCATAAGG+AGG | - | chr4_1:60753662-60753681 | Msa0561250:intron | 45.0% | |
| !! | GGTGTTGCTCATCAACATTC+AGG | - | chr4_1:60753750-60753769 | Msa0561250:intron | 45.0% |
| GTTGCTCATCAACATTCAGG+TGG | - | chr4_1:60753753-60753772 | Msa0561250:intron | 45.0% | |
| TATGGAACCGGAAATGAAGC+AGG | - | chr4_1:60754381-60754400 | Msa0561250:CDS | 45.0% | |
| CGGAAATGAAGCAGGAAATG+AGG | - | chr4_1:60754389-60754408 | Msa0561250:CDS | 45.0% | |
| GTCTAACTACAACAGCAGCA+AGG | - | chr4_1:60754494-60754513 | Msa0561250:CDS | 45.0% | |
| CTAACTACAACAGCAGCAAG+GGG | - | chr4_1:60754496-60754515 | Msa0561250:CDS | 45.0% | |
| ! | GGGACTTTTCTACCTATTGG+TGG | - | chr4_1:60754533-60754552 | Msa0561250:CDS | 45.0% |
| CTGTCCCCTAAGTTTGAACT+TGG | - | chr4_1:60752560-60752579 | Msa0561250:CDS | 45.0% | |
| CCAGGTCCAAGTTCAAACTT+AGG | + | chr4_1:60752569-60752588 | None:intergenic | 45.0% | |
| CCTAAGTTTGAACTTGGACC+TGG | - | chr4_1:60752566-60752585 | Msa0561250:CDS | 45.0% | |
| TGGAGATAGGTTTCATGGAG+AGG | + | chr4_1:60752692-60752711 | None:intergenic | 45.0% | |
| CATGTTCTTGTGAGGAACAG+TGG | - | chr4_1:60752794-60752813 | Msa0561250:intron | 45.0% | |
| ACCGATATTCCGGATCCTTT+CGG | - | chr4_1:60752881-60752900 | Msa0561250:intron | 45.0% | |
| ACCGAAAGGATCCGGAATAT+CGG | + | chr4_1:60752885-60752904 | None:intergenic | 45.0% | |
| !! | AACCCTTCTGGAATCTCTTC+AGG | + | chr4_1:60752923-60752942 | None:intergenic | 45.0% |
| AGAGATTCCAGAAGGGTTTG+AGG | - | chr4_1:60752925-60752944 | Msa0561250:intron | 45.0% | |
| CATTTGTCCTCAAACCCTTC+TGG | + | chr4_1:60752935-60752954 | None:intergenic | 45.0% | |
| CAGAAGGGTTTGAGGACAAA+TGG | - | chr4_1:60752933-60752952 | Msa0561250:intron | 45.0% | |
| TGTTCATGCCATCGATACAC+GGG | - | chr4_1:60752964-60752983 | Msa0561250:intron | 45.0% | |
| ACACGGTGCAAATTGAAGGA+AGG | - | chr4_1:60753109-60753128 | Msa0561250:intron | 45.0% | |
| GAACTCAGACCATGATTGCA+AGG | - | chr4_1:60753270-60753289 | Msa0561250:intron | 45.0% | |
| AAAATCAAGGACACCGGGTT+TGG | - | chr4_1:60753434-60753453 | Msa0561250:intron | 45.0% | |
| AGTGTCTTGGATTCCAAACC+CGG | + | chr4_1:60753450-60753469 | None:intergenic | 45.0% | |
| CCATATACCCGGCAAAGTAA+TGG | + | chr4_1:60753595-60753614 | None:intergenic | 45.0% | |
| CCATTACTTTGCCGGGTATA+TGG | - | chr4_1:60753592-60753611 | Msa0561250:intron | 45.0% | |
| CATGTTGCTCACCATATACC+CGG | + | chr4_1:60753606-60753625 | None:intergenic | 45.0% | |
| TTGCAGCACAAACCATAAGG+AGG | - | chr4_1:60753662-60753681 | Msa0561250:intron | 45.0% | |
| !! | GGTGTTGCTCATCAACATTC+AGG | - | chr4_1:60753750-60753769 | Msa0561250:intron | 45.0% |
| GTTGCTCATCAACATTCAGG+TGG | - | chr4_1:60753753-60753772 | Msa0561250:intron | 45.0% | |
| TATGGAACCGGAAATGAAGC+AGG | - | chr4_1:60754381-60754400 | Msa0561250:CDS | 45.0% | |
| CGGAAATGAAGCAGGAAATG+AGG | - | chr4_1:60754389-60754408 | Msa0561250:CDS | 45.0% | |
| GTCTAACTACAACAGCAGCA+AGG | - | chr4_1:60754494-60754513 | Msa0561250:CDS | 45.0% | |
| CTAACTACAACAGCAGCAAG+GGG | - | chr4_1:60754496-60754515 | Msa0561250:CDS | 45.0% | |
| ! | GGGACTTTTCTACCTATTGG+TGG | - | chr4_1:60754533-60754552 | Msa0561250:CDS | 45.0% |
| TTCCACGTGTTTCGGATCCA+AGG | + | chr4_1:60752856-60752875 | None:intergenic | 50.0% | |
| TGGAACAGCGACCGATATTC+CGG | - | chr4_1:60752871-60752890 | Msa0561250:intron | 50.0% | |
| GTTCATGCCATCGATACACG+GGG | - | chr4_1:60752965-60752984 | Msa0561250:intron | 50.0% | |
| TTCATGCCATCGATACACGG+GGG | - | chr4_1:60752966-60752985 | Msa0561250:intron | 50.0% | |
| GGGGGGCAGAGGATAAATTA+GGG | - | chr4_1:60752984-60753003 | Msa0561250:intron | 50.0% | |
| CGGGTATATGGTGAGCAACA+TGG | - | chr4_1:60753604-60753623 | Msa0561250:intron | 50.0% | |
| TGGATCAACTCTATACGGGC+AGG | - | chr4_1:60753779-60753798 | Msa0561250:intron | 50.0% | |
| TTCGAGTGTCTGGCACATGT+TGG | - | chr4_1:60754143-60754162 | Msa0561250:CDS | 50.0% | |
| ! | AAGGGGCACACTGGAGTAAT+GGG | - | chr4_1:60754513-60754532 | Msa0561250:CDS | 50.0% |
| GGAGTTGTTCTGCCACCAAT+AGG | + | chr4_1:60754548-60754567 | None:intergenic | 50.0% | |
| TTCCACGTGTTTCGGATCCA+AGG | + | chr4_1:60752856-60752875 | None:intergenic | 50.0% | |
| TGGAACAGCGACCGATATTC+CGG | - | chr4_1:60752871-60752890 | Msa0561250:intron | 50.0% | |
| GTTCATGCCATCGATACACG+GGG | - | chr4_1:60752965-60752984 | Msa0561250:intron | 50.0% | |
| TTCATGCCATCGATACACGG+GGG | - | chr4_1:60752966-60752985 | Msa0561250:intron | 50.0% | |
| GGGGGGCAGAGGATAAATTA+GGG | - | chr4_1:60752984-60753003 | Msa0561250:intron | 50.0% | |
| CGGGTATATGGTGAGCAACA+TGG | - | chr4_1:60753604-60753623 | Msa0561250:intron | 50.0% | |
| TGGATCAACTCTATACGGGC+AGG | - | chr4_1:60753779-60753798 | Msa0561250:intron | 50.0% | |
| TTCGAGTGTCTGGCACATGT+TGG | - | chr4_1:60754143-60754162 | Msa0561250:CDS | 50.0% | |
| ! | AAGGGGCACACTGGAGTAAT+GGG | - | chr4_1:60754513-60754532 | Msa0561250:CDS | 50.0% |
| GGAGTTGTTCTGCCACCAAT+AGG | + | chr4_1:60754548-60754567 | None:intergenic | 50.0% | |
| GAGGAACAGTGGCATATGCC+AGG | - | chr4_1:60752805-60752824 | Msa0561250:intron | 55.0% | |
| GGTCGCTGTTCCACGTGTTT+CGG | + | chr4_1:60752864-60752883 | None:intergenic | 55.0% | |
| TCATGCCATCGATACACGGG+GGG | - | chr4_1:60752967-60752986 | Msa0561250:intron | 55.0% | |
| CGGGGGGCAGAGGATAAATT+AGG | - | chr4_1:60752983-60753002 | Msa0561250:intron | 55.0% | |
| ! | CAAGGGGCACACTGGAGTAA+TGG | - | chr4_1:60754512-60754531 | Msa0561250:CDS | 55.0% |
| GAGGAACAGTGGCATATGCC+AGG | - | chr4_1:60752805-60752824 | Msa0561250:intron | 55.0% | |
| GGTCGCTGTTCCACGTGTTT+CGG | + | chr4_1:60752864-60752883 | None:intergenic | 55.0% | |
| TCATGCCATCGATACACGGG+GGG | - | chr4_1:60752967-60752986 | Msa0561250:intron | 55.0% | |
| CGGGGGGCAGAGGATAAATT+AGG | - | chr4_1:60752983-60753002 | Msa0561250:intron | 55.0% | |
| ! | CAAGGGGCACACTGGAGTAA+TGG | - | chr4_1:60754512-60754531 | Msa0561250:CDS | 55.0% |
| GGCCTTGGATCCGAAACACG+TGG | - | chr4_1:60752851-60752870 | Msa0561250:intron | 60.0% | |
| ! | AACAGCAGCAAGGGGCACAC+TGG | - | chr4_1:60754504-60754523 | Msa0561250:CDS | 60.0% |
| GGCCTTGGATCCGAAACACG+TGG | - | chr4_1:60752851-60752870 | Msa0561250:intron | 60.0% | |
| ! | AACAGCAGCAAGGGGCACAC+TGG | - | chr4_1:60754504-60754523 | Msa0561250:CDS | 60.0% |
| CTCTGCCCCCCGTGTATCGA+TGG | + | chr4_1:60752975-60752994 | None:intergenic | 65.0% | |
| CATCGATACACGGGGGGCAG+AGG | - | chr4_1:60752973-60752992 | Msa0561250:intron | 65.0% | |
| CTCTGCCCCCCGTGTATCGA+TGG | + | chr4_1:60752975-60752994 | None:intergenic | 65.0% | |
| CATCGATACACGGGGGGCAG+AGG | - | chr4_1:60752973-60752992 | Msa0561250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 60752443 | 60754644 | 60752443 | ID=Msa0561250;Name=Msa0561250 |
| chr4_1 | mRNA | 60752443 | 60754644 | 60752443 | ID=Msa0561250-mRNA-1;Parent=Msa0561250;Name=Msa0561250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|3|0|434 |
| chr4_1 | exon | 60753796 | 60754644 | 60753796 | ID=Msa0561250-mRNA-1:exon:18974;Parent=Msa0561250-mRNA-1 |
| chr4_1 | exon | 60753287 | 60753445 | 60753287 | ID=Msa0561250-mRNA-1:exon:18973;Parent=Msa0561250-mRNA-1 |
| chr4_1 | exon | 60752443 | 60752739 | 60752443 | ID=Msa0561250-mRNA-1:exon:18972;Parent=Msa0561250-mRNA-1 |
| chr4_1 | CDS | 60753796 | 60754644 | 60753796 | ID=Msa0561250-mRNA-1:cds;Parent=Msa0561250-mRNA-1 |
| chr4_1 | CDS | 60753287 | 60753445 | 60753287 | ID=Msa0561250-mRNA-1:cds;Parent=Msa0561250-mRNA-1 |
| chr4_1 | CDS | 60752443 | 60752739 | 60752443 | ID=Msa0561250-mRNA-1:cds;Parent=Msa0561250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
